Pregenerated sensors for CRTAM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032021Ensembl transcript IDs: ENSMUST00000034519.13, ENSMUST00000180384.3, ENSMUST00000180872.9, ENSMUST00000188848.8
Found 311 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCACATTTCTCTGTTGCCCACCAGGCCTCTTCTGAGAGGCTGTCTTaGAAGCAGGCTGCTGGCATCTCAGGTCTCCTTGGGGTACTTCTC | + |
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Preference number: 1 (lower is better) Translates to: PHFSVAHQASSERLS*KQAAGISGLLGVLL Trigger: GAGAAGTACCCCAAGGAGACCTGAGATGCCAGCAGCCTGCTTTCAAGACAGCCTCTCAGAAGAGGCCTGGTGGGCAACAGAGAAATGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR GCA 90 bp | GAATGGGTGAGAAGACTGGCACACAGCAGTGTCTGTGCACCTGTGTaGATGTCAAAGGCTTCCACACAGAGGGGCCACACATGTGAGGTC | + |
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Preference number: 1 (lower is better) Translates to: EWVRRLAHSSVCAPV*MSKASTQRGHTCEV Trigger: GACCTCACATGTGTGGCCCCTCTGTGTGGAAGCCTTTGACATGCACACAGGTGCACAGACACTGCTGTGTGCCAGTCTTCTCACCCATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR CCA 90 bp | CAGTGCTCCACATGGAGCTACCCTTGCCCACACTCTCAGTTTGAATaGGTGAGAAGACTGGCACACAGCAGTGTCTGTGCACCTGTGTGC | + |
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Preference number: 1 (lower is better) Translates to: QCSTWSYPCPHSQFE*VRRLAHSSVCAPVC Trigger: GCACACAGGTGCACAGACACTGCTGTGTGCCAGTCTTCTCACCCATTCAAACTGAGAGTGTGGGCAAGGGTAGCTCCATGTGGAGCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR TCA 90 bp | GCTCCACATGGAGCTACCCTTGCCCACACTCTCAGTTTGAATGGGTaGGAAGACTGGCACACAGCAGTGTCTGTGCACCTGTGTGCATGT | + |
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Preference number: 1 (lower is better) Translates to: APHGATLAHTLSLNG*EDWHTAVSVHLCAC Trigger: ACATGCACACAGGTGCACAGACACTGCTGTGTGCCAGTCTTCTCACCCATTCAAACTGAGAGTGTGGGCAAGGGTAGCTCCATGTGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR TCA 90 bp | GAGTCAGTGCTCCACATGGAGCTACCCTTGCCCACACTCTCAGTTTaGATGGGTGAGAAGACTGGCACACAGCAGTGTCTGTGCACCTGT | + |
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Preference number: 1 (lower is better) Translates to: ESVLHMELPLPTLSV*MGEKTGTQQCLCTC Trigger: ACAGGTGCACAGACACTGCTGTGTGCCAGTCTTCTCACCCATTCAAACTGAGAGTGTGGGCAAGGGTAGCTCCATGTGGAGCACTGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR CCA 90 bp | TTGATTGGTAGGCAGCAGGAAGAGAGAGTGAGGCAGGGCCTGGTTTaGGATTCCTCAAAGCCCATCCCCAGTGACACTCCTTCTCCAACA | + |
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Preference number: 1 (lower is better) Translates to: LIGRQQEERVRQGLV*DSSKPIPSDTPSPT Trigger: TGTTGGAGAAGGAGTGTCACTGGGGATGGGCTTTGAGGAATCCCAAACCAGGCCCTGCCTCACTCTCTCTTCCTGCTGCCTACCAATCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR TCA 90 bp | GCCCGTCAGGTTGGCTCATGGTTAGTCAGGAAGCCTCTTGTCAGTTaGACTCAGTTGAGAGTTGTGGCTCTCTGGGGCATCATGTCCACT | + |
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Preference number: 1 (lower is better) Translates to: ARQVGSWLVRKPLVS*TQLRVVALWGIMST Trigger: AGTGGACATGATGCCCCAGAGAGCCACAACTCTCAACTGAGTTCAACTGACAAGAGGCTTCCTGACTAACCATGAGCCAACCTGACGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR GCA 90 bp | ACTCAGTTGAGAGTTGTGGCTCTCTGGGGCATCATGTCCACTGCGTaGTGTAACATCCCACATTTCTCTGTTGCCCACCAGGCCTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: TQLRVVALWGIMSTA*CNIPHFSVAHQASS Trigger: AGAAGAGGCCTGGTGGGCAACAGAGAAATGTGGGATGTTACAGCACGCAGTGGACATGATGCCCCAGAGAGCCACAACTCTCAACTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR GCA 90 bp | AAGGAGCAGAGAACCTACATGGAGGAAGCAAAGACATGGAGCCTTTaGCGGAGAAGGACATCTAAGGGCAATGGGCACTGGTGGAACTGG | + |
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Preference number: 1 (lower is better) Translates to: KEQRTYMEEAKTWSL*RRRTSKGNGHWWNW Trigger: CCAGTTCCACCAGTGCCCATTGCCCTTAGATGTCCTTCTCCGGCAAAGGCTCCATGTCTTTGCTTCCTCCATGTAGGTTCTCTGCTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR CCA 90 bp | AGAGAGTATGAGAGCCCCAGCCTAGGAAGGAGTCAGTGCTCCACATaGAGCTACCCTTGCCCACACTCTCAGTTTGAATGGGTGAGAAGA | + |
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Preference number: 1 (lower is better) Translates to: REYESPSLGRSQCST*SYPCPHSQFEWVRR Trigger: TCTTCTCACCCATTCAAACTGAGAGTGTGGGCAAGGGTAGCTCCATGTGGAGCACTGACTCCTTCCTAGGCTGGGGCTCTCATACTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR CCA 90 bp | TGGAGCCTTTGCCGGAGAAGGACATCTAAGGGCAATGGGCACTGGTaGAACTGGGAGATGACCTCCAAGAAGGGAACTGATAAATTGGCA | + |
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Preference number: 1 (lower is better) Translates to: WSLCRRRTSKGNGHW*NWEMTSKKGTDKLA Trigger: TGCCAATTTATCAGTTCCCTTCTTGGAGGTCATCTCCCAGTTCCACCAGTGCCCATTGCCCTTAGATGTCCTTCTCCGGCAAAGGCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR CCA 90 bp | CCCATGTTTAAGGAGCAGAGAACCTACATGGAGGAAGCAAAGACATaGAGCCTTTGCCGGAGAAGGACATCTAAGGGCAATGGGCACTGG | + |
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Preference number: 1 (lower is better) Translates to: PMFKEQRTYMEEAKT*SLCRRRTSKGNGHW Trigger: CCAGTGCCCATTGCCCTTAGATGTCCTTCTCCGGCAAAGGCTCCATGTCTTTGCTTCCTCCATGTAGGTTCTCTGCTCCTTAAACATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR GCA 90 bp | CTTTCAGCGAGGAGCTTTCTGTCCATGGCTTGGTCCTCATGTGGCTaGCCTGGCTCAATGGACACTGTCTTGAATTGTACTCAATGGACA | + |
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Preference number: 1 (lower is better) Translates to: LSARSFLSMAWSSCG*PGSMDTVLNCTQWT Trigger: TGTCCATTGAGTACAATTCAAGACAGTGTCCATTGAGCCAGGGCAGCCACATGAGGACCAAGCCATGGACAGAAAGCTCCTCGCTGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR CCA 90 bp | CTCTCTTCGAGACTTGTCATCTCCCCACAATCAGCCCTTCCTCTCTaGGATAGAATTATAAGGCTGTGGCATTCTGTGGCATTGCAGCCC | + |
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Preference number: 1 (lower is better) Translates to: LSSRLVISPQSALPL*DRIIRLWHSVALQP Trigger: GGGCTGCAATGCCACAGAATGCCACAGCCTTATAATTCTATCCCAGAGAGGAAGGGCTGATTGTGGGGAGATGACAAGTCTCGAAGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR CCA 90 bp | ACATGGAGCCTTTGCCGGAGAAGGACATCTAAGGGCAATGGGCACTaGTGGAACTGGGAGATGACCTCCAAGAAGGGAACTGATAAATTG | + |
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Preference number: 1 (lower is better) Translates to: TWSLCRRRTSKGNGH*WNWEMTSKKGTDKL Trigger: CAATTTATCAGTTCCCTTCTTGGAGGTCATCTCCCAGTTCCACCAGTGCCCATTGCCCTTAGATGTCCTTCTCCGGCAAAGGCTCCATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR TCA 90 bp | GGAGAAGGACATCTAAGGGCAATGGGCACTGGTGGAACTGGGAGATaGCCTCCAAGAAGGGAACTGATAAATTGGCAAATACACTGGGGA | + |
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Preference number: 1 (lower is better) Translates to: GEGHLRAMGTGGTGR*PPRRELINWQIHWG Trigger: TCCCCAGTGTATTTGCCAATTTATCAGTTCCCTTCTTGGAGGTCATCTCCCAGTTCCACCAGTGCCCATTGCCCTTAGATGTCCTTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR CCA 90 bp | AGCGAGGAGCTTTCTGTCCATGGCTTGGTCCTCATGTGGCTGCCCTaGCTCAATGGACACTGTCTTGAATTGTACTCAATGGACATTCTA | + |
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Preference number: 1 (lower is better) Translates to: SEELSVHGLVLMWLP*LNGHCLELYSMDIL Trigger: TAGAATGTCCATTGAGTACAATTCAAGACAGTGTCCATTGAGCCAGGGCAGCCACATGAGGACCAAGCCATGGACAGAAAGCTCCTCGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR TCA 90 bp | ACAGCATCCAAGGACTGTGAGTGGAAGACAGCGATGCTGCTTTCCTaGCTTAGAAGTTTGCTCTGCTGTGATAGGTGTCTTTCTTGGGGT | + |
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Preference number: 1 (lower is better) Translates to: TASKDCEWKTAMLLS*LRSLLCCDRCLSWG Trigger: ACCCCAAGAAAGACACCTATCACAGCAGAGCAAACTTCTAAGTCAGGAAAGCAGCATCGCTGTCTTCCACTCACAGTCCTTGGATGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR GCA 90 bp | AAGGCTGTGGCATTCTGTGGCATTGCAGCCCATTCCCCTAAAAGCTaGAAGATAAATGTATGGTCCTATCCAGTACCTGGCTCCTTGTCA | + |
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Preference number: 1 (lower is better) Translates to: KAVAFCGIAAHSPKS*KINVWSYPVPGSLS Trigger: TGACAAGGAGCCAGGTACTGGATAGGACCATACATTTATCTTGCAGCTTTTAGGGGAATGGGCTGCAATGCCACAGAATGCCACAGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR CCA 90 bp | TGTGGCATTGCAGCCCATTCCCCTAAAAGCTGCAAGATAAATGTATaGTCCTATCCAGTACCTGGCTCCTTGTCATGTAGGCTGTGTCAG | + |
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Preference number: 1 (lower is better) Translates to: CGIAAHSPKSCKINV*SYPVPGSLSCRLCQ Trigger: CTGACACAGCCTACATGACAAGGAGCCAGGTACTGGATAGGACCATACATTTATCTTGCAGCTTTTAGGGGAATGGGCTGCAATGCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR CCA 90 bp | CTTTGCCGGAGAAGGACATCTAAGGGCAATGGGCACTGGTGGAACTaGGAGATGACCTCCAAGAAGGGAACTGATAAATTGGCAAATACA | + |
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Preference number: 1 (lower is better) Translates to: LCRRRTSKGNGHWWN*EMTSKKGTDKLANT Trigger: TGTATTTGCCAATTTATCAGTTCCCTTCTTGGAGGTCATCTCCCAGTTCCACCAGTGCCCATTGCCCTTAGATGTCCTTCTCCGGCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR CCA 90 bp | ACTCTGGCTCAGGGCTTTTCTCCACTCTGCATGCTGCTGAGTTGTTaGTACATTCACTTGATTCCTGATAATGGGCCTGGAGAAATTGGG | + |
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Preference number: 1 (lower is better) Translates to: TLAQGFSPLCMLLSC*YIHLIPDNGPGEIG Trigger: CCCAATTTCTCCAGGCCCATTATCAGGAATCAAGTGAATGTACCAACAACTCAGCAGCATGCAGAGTGGAGAAAAGCCCTGAGCCAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR GCA 90 bp | TTCAAACCATCACAGCATCCAAGGACTGTGAGTGGAAGACAGCGATaGTGCTTTCCTGACTTAGAAGTTTGCTCTGCTGTGATAGGTGTC | + |
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Preference number: 1 (lower is better) Translates to: FKPSQHPRTVSGRQR*CFPDLEVCSAVIGV Trigger: GACACCTATCACAGCAGAGCAAACTTCTAAGTCAGGAAAGCAGCATCGCTGTCTTCCACTCACAGTCCTTGGATGCTGTGATGGTTTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR GCA 90 bp | AAACCATCACAGCATCCAAGGACTGTGAGTGGAAGACAGCGATGCTaGTTTCCTGACTTAGAAGTTTGCTCTGCTGTGATAGGTGTCTTT | + |
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Preference number: 1 (lower is better) Translates to: KPSQHPRTVSGRQRC*FPDLEVCSAVIGVF Trigger: AAAGACACCTATCACAGCAGAGCAAACTTCTAAGTCAGGAAAGCAGCATCGCTGTCTTCCACTCACAGTCCTTGGATGCTGTGATGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR GCA 90 bp | ATACCTCAAAAGCCATGGCAACTATCACAAATCCTGGATCCTAAATaGCAGAGTCCATTGCAGACTCTCTTCGAGACTTGTCATCTCCCC | + |
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Preference number: 1 (lower is better) Translates to: IPQKPWQLSQILDPK*QSPLQTLFETCHLP Trigger: GGGGAGATGACAAGTCTCGAAGAGAGTCTGCAATGGACTCTGGCATTTAGGATCCAGGATTTGTGATAGTTGCCATGGCTTTTGAGGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCTTCTGAGAGGCTGTCTTGAAAGCAGGCTGCTGGCATCTCAGGTCTCCTTGGGCTTGGTCCTCATGTaGCTGCCCTGGCTCAATGGA | + |
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Preference number: 2 (lower is better) Translates to: PLLRGCLESRLLASQVSLGLVLM*LPWLNG Trigger: TCCATTGAGCCAGGGCAGCCACATGAGGACCAAGCC...CAAGGAGACCTGAGATGCCAGCAGCCTGCTTTCAAGACAGCCTCTCAGAAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR CAA 90 bp | GGGGCATCATGTCCACTGCGTGCTGTAACATCCCACATTTCTCTGTaGCCCACCAGGCCTCTTCTGAGAGGCTGTCTTGAAAGCAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: GASCPLRAVTSHISL*PTRPLLRGCLESRL Trigger: CAGCCTGCTTTCAAGACAGCCTCTCAGAAGAGGCCTGGTGGGCAACAGAGAAATGTGGGATGTTACAGCACGCAGTGGACATGATGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGTGCACCTGTGTGCATGTCAAAGGCTTCCACACAGAGGGGCCACACATGTGTCTGAGAGGCTGTCTTaGAAGCAGGCTGCTGGCATC | + |
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Preference number: 2 (lower is better) Translates to: SVHLCACQRLPHRGATHVSERLS*KQAAGI Trigger: GATGCCAGCAGCCTGCTTTCAAGACAGCCTCTCAGA...CACATGTGTGGCCCCTCTGTGTGGAAGCCTTTGACATGCACACAGGTGCACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR-3UTR TCA 90 bp | ACATGGAGCCTTTGCCGGAGAAGGACATCTAAGGGCAATGGGCACTGGTGGAACGAGGTGAAGATGAAGTaGGAAGCCAGCTGGGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: TWSLCRRRTSKGNGHWWNEVKMK*EASWGL Trigger: AAGGCCCCAGCTGGCTTCTCACTTCATCTTCACCTC...GTTCCACCAGTGCCCATTGCCCTTAGATGTCCTTCTCCGGCAAAGGCTCCATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR CAA 90 bp | GGCCCGTCAGGTTGGCTCATGGTTAGTCAGGAAGCCTCTTGTCAGTaGAACTCAGTTGAGAGTTGTGGCTCTCTGGGGCATCATGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: GPSGWLMVSQEASCQ*NSVESCGSLGHHVH Trigger: GTGGACATGATGCCCCAGAGAGCCACAACTCTCAACTGAGTTCAACTGACAAGAGGCTTCCTGACTAACCATGAGCCAACCTGACGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGTTGTGGCTCTCTGGGGCATCATGTCCACTGCGTGCTGTAACATCCCACATTCTGAGAGGCTGTCTTaGAAGCAGGCTGCTGGCATC | + |
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Preference number: 2 (lower is better) Translates to: RVVALWGIMSTACCNIPHSERLS*KQAAGI Trigger: GATGCCAGCAGCCTGCTTTCAAGACAGCCTCTCAGA...ATGTGGGATGTTACAGCACGCAGTGGACATGATGCCCCAGAGAGCCACAACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGCTCCCACCACCTCATTCCATTCTAAATGTCCCCTGCAGTCCTCTTACTACAGCAGGAAGAGAGAGTaGGGCAGGGCCTGGTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: TAPTTSFHSKCPLQSSYYSRKRE*GRAWFG Trigger: CCCAAACCAGGCCCTGCCTCACTCTCTCTTCCTGCT...GTAGTAAGAGGACTGCAGGGGACATTTAGAATGGAATGAGGTGGTGGGAGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCTTCTGAGAGGCTGTCTTGAAAGCAGGCTGCTGGCATCTCAGGTCTCCTTGCCCTTCGAGGTCAGCTaGTCACTGGTCATTTTGACC | + |
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Preference number: 2 (lower is better) Translates to: PLLRGCLESRLLASQVSLPFEVS*SLVILT Trigger: GGTCAAAATGACCAGTGAGCAGCTGACCTCGAAGGG...CAAGGAGACCTGAGATGCCAGCAGCCTGCTTTCAAGACAGCCTCTCAGAAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCAGGAAGCCTCTTGTCAGTTGAACTCAGTTGAGAGTTGTGGCTCTCTGGGGGGCTTGGTCCTCATGTaGCTGCCCTGGCTCAATGGA | + |
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Preference number: 2 (lower is better) Translates to: SQEASCQLNSVESCGSLGGLVLM*LPWLNG Trigger: TCCATTGAGCCAGGGCAGCCACATGAGGACCAAGCC...CCCCAGAGAGCCACAACTCTCAACTGAGTTCAACTGACAAGAGGCTTCCTGACT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGTCTTGAAAGCAGGCTGCTGGCATCTCAGGTCTCCTTGGGGTACTTCTCATGGAGCTTTCTGTCCATaGCTTGGTCCTCATGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: AVLKAGCWHLRSPWGTSHGAFCP*LGPHVA Trigger: AGCCACATGAGGACCAAGCCATGGACAGAAAGCTCC...ATGAGAAGTACCCCAAGGAGACCTGAGATGCCAGCAGCCTGCTTTCAAGACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR-3UTR CCA 90 bp | TTGAACTCAGTTGAGAGTTGTGGCTCTCTGGGGCATCATGTCCACTGCGTGCTGGGAGCTTTCTGTCCATaGCTTGGTCCTCATGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: LNSVESCGSLGHHVHCVLGAFCP*LGPHVA Trigger: AGCCACATGAGGACCAAGCCATGGACAGAAAGCTCC...CAGCACGCAGTGGACATGATGCCCCAGAGAGCCACAACTCTCAACTGAGTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGGCTCATTCCCTTCCTCTCAACCCCCTACAGGTACACTCTTCCCAAACAGTTTGAAAGCAGGCTGCTaGCATCTCAGGTCTCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: PGSFPSSQPPTGTLFPNSLKAGC*HLRSPW Trigger: CCAAGGAGACCTGAGATGCCAGCAGCCTGCTTTCAA...ACTGTTTGGGAAGAGTGTACCTGTAGGGGGTTGAGAGGAAGGGAATGAGCCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGGCTCATTCCCTTCCTCTCAACCCCCTACAGGTACACTCTTCCCAAACAGTCATGTGAGCCTGTGGTaGCCATCCTCATTCAAACCA | + |
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Preference number: 2 (lower is better) Translates to: PGSFPSSQPPTGTLFPNSHVSLW*PSSFKP Trigger: TGGTTTGAATGAGGATGGTCACCACAGGCTCACATG...ACTGTTTGGGAAGAGTGTACCTGTAGGGGGTTGAGAGGAAGGGAATGAGCCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR-3UTR TCA 90 bp | TGTCTGTGCACCTGTGTGCATGTCAAAGGCTTCCACACAGAGGGGCCACACATGGGTTCCACCAACTGGTaGCCAAGCATTCAAACATGT | + |
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Preference number: 2 (lower is better) Translates to: CLCTCVHVKGFHTEGPHMGSTNW*PSIQTC Trigger: ACATGTTTGAATGCTTGGTCACCAGTTGGTGGAACC...CATGTGTGGCCCCTCTGTGTGGAAGCCTTTGACATGCACACAGGTGCACAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGCTCCCACCACCTCATTCCATTCTAAATGTCCCCTGCAGTCCTCTTACTACGGTGGAACTGGGAGATaGCCTCCAAGAAGGGAACTG | + |
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Preference number: 2 (lower is better) Translates to: TAPTTSFHSKCPLQSSYYGGTGR*PPRREL Trigger: CAGTTCCCTTCTTGGAGGTCATCTCCCAGTTCCACC...GTAGTAAGAGGACTGCAGGGGACATTTAGAATGGAATGAGGTGGTGGGAGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR-3UTR GCA 90 bp | TTGTGGCTCTCTGGGGCATCATGTCCACTGCGTGCTGTAACATCCCACATTTCTCCCTTCGAGGTCAGCTaGTCACTGGTCATTTTGACC | + |
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Preference number: 2 (lower is better) Translates to: LWLSGASCPLRAVTSHISPFEVS*SLVILT Trigger: GGTCAAAATGACCAGTGAGCAGCTGACCTCGAAGGG...AGAAATGTGGGATGTTACAGCACGCAGTGGACATGATGCCCCAGAGAGCCACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| 3UTR-3UTR CCA 90 bp | TTGTGGCTCTCTGGGGCATCATGTCCACTGCGTGCTGTAACATCCCACATTTCTCTCATGTGGCTGCCCTaGCTCAATGGACACTGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: LWLSGASCPLRAVTSHISLMWLP*LNGHCL Trigger: AAGACAGTGTCCATTGAGCCAGGGCAGCCACATGAG...AGAAATGTGGGATGTTACAGCACGCAGTGGACATGATGCCCCAGAGAGCCACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTCAGGAAGCCTCTTGTCAGTTGAACTCAGTTGAGAGTTGTGGCTCTCTGGGGTTTCTGTCCATGGCTTaGTCCTCATGTGGCTGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: SQEASCQLNSVESCGSLGFLSMA*SSCGCP Trigger: AGGGCAGCCACATGAGGACCAAGCCATGGACAGAAA...CCCCAGAGAGCCACAACTCTCAACTGAGTTCAACTGACAAGAGGCTTCCTGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCTTTTCTCCACTCTGCATGCTGCTGAGTTGTTGGTACATTCACTTGATTCCTGCTCCAGAGAGAGTATaGGAGCCCCAGCCTAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: GFSPLCMLLSCWYIHLIPAPERV*EPQPRK Trigger: CTTCCTAGGCTGGGGCTCTCATACTCTCTCTGGAGC...AGGAATCAAGTGAATGTACCAACAACTCAGCAGCATGCAGAGTGGAGAAAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR GCA 90 bp | ACATGGAGCCTTTGCCGGAGAAGGACATCTAAGGGCAATGGGCACTGGTGGAACAATGCCAGAGTCCATTaGAGACTCTCTTCGAGACTT | + |
|
Preference number: 2 (lower is better) Translates to: TWSLCRRRTSKGNGHWWNNARVH*RLSSRL Trigger: AAGTCTCGAAGAGAGTCTGCAATGGACTCTGGCATT...GTTCCACCAGTGCCCATTGCCCTTAGATGTCCTTCTCCGGCAAAGGCTCCATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTCTGTGCACCTGTGTGCATGTCAAAGGCTTCCACACAGAGGGGCCACACATGATCCTGGATCCTAAATaGCAGAGTCCATTGCAGACT | + |
|
Preference number: 2 (lower is better) Translates to: CLCTCVHVKGFHTEGPHMILDPK*QSPLQT Trigger: AGTCTGCAATGGACTCTGGCATTTAGGATCCAGGAT...CATGTGTGGCCCCTCTGTGTGGAAGCCTTTGACATGCACACAGGTGCACAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTGTCAGACCAAATCATATAGTGGAGAACTTGCCACCAGCCCACCGAAGCACACTCATGTGGCTGCCCTaGCTCAATGGACACTGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: CVRPNHIVENLPPAHRSTLMWLP*LNGHCL Trigger: AAGACAGTGTCCATTGAGCCAGGGCAGCCACATGAG...TGTGCTTCGGTGGGCTGGTGGCAAGTTCTCCACTATATGATTTGGTCTGACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR CAA 90 bp | GGCTTTTCTCCACTCTGCATGCTGCTGAGTTGTTGGTACATTCACTaGATTCCTGATAATGGGCCTGGAGAAATTGGGGGAGTCACCGGA | + |
|
Preference number: 2 (lower is better) Translates to: GFSPLCMLLSCWYIH*IPDNGPGEIGGVTG Trigger: TCCGGTGACTCCCCCAATTTCTCCAGGCCCATTATCAGGAATCAAGTGAATGTACCAACAACTCAGCAGCATGCAGAGTGGAGAAAAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CCA 90 bp | AACGACTTAGCAGAGTTCTCCAGCTCTGAGGTAGTGTCAGTCATAATAGGTTCTGGCTTGGTCCTCATGTaGCTGCCCTGGCTCAATGGA | + |
|
Preference number: 2 (lower is better) Translates to: NDLAEFSSSEVVSVIIGSGLVLM*LPWLNG Trigger: TCCATTGAGCCAGGGCAGCCACATGAGGACCAAGCC...AGAACCTATTATGACTGACACTACCTCAGAGCTGGAGAACTCTGCTAAGTCGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAAAGCCATGGCAACTATCACAAATCCTGGATCCTAAATGCCAGAGTCCATTGGGCTGTGGCATTCTGTaGCATTGCAGCCCATTCCCC | + |
|
Preference number: 2 (lower is better) Translates to: QKPWQLSQILDPKCQSPLGCGIL*HCSPFP Trigger: GGGGAATGGGCTGCAATGCCACAGAATGCCACAGCC...CAATGGACTCTGGCATTTAGGATCCAGGATTTGTGATAGTTGCCATGGCTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTGTGCACCTGTGTGCATGTCAAAGGCTTCCACACAGAGGGGCCACACATGAGAATTATAAGGCTGTaGCATTCTGTGGCATTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: CLCTCVHVKGFHTEGPHMRIIRL*HSVALQ Trigger: CTGCAATGCCACAGAATGCCACAGCCTTATAATTCT...CATGTGTGGCCCCTCTGTGTGGAAGCCTTTGACATGCACACAGGTGCACAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR CAA 90 bp | TTCTTTCTATGTTTTCCTTTCAGCGAGGAGCTTTCTGTCCATGGCTaGGTCCTCATGTGGCTGCCCTGGCTCAATGGACACTGTCTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: FFLCFPFSEELSVHG*VLMWLPWLNGHCLE Trigger: TTCAAGACAGTGTCCATTGAGCCAGGGCAGCCACATGAGGACCAAGCCATGGACAGAAAGCTCCTCGCTGAAAGGAAAACATAGAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR CAA 90 bp | CCATGGCAACTATCACAAATCCTGGATCCTAAATGCCAGAGTCCATaGCAGACTCTCTTCGAGACTTGTCATCTCCCCACAATCAGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: PWQLSQILDPKCQSP*QTLFETCHLPTISP Trigger: AGGGCTGATTGTGGGGAGATGACAAGTCTCGAAGAGAGTCTGCAATGGACTCTGGCATTTAGGATCCAGGATTTGTGATAGTTGCCATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCCTTTCAGCGAGGAGCTTTCTGTCCATGGCTTGGTCCTCATGTGGCTGCCCTCAATGGACACTGTCTTaGATTGTACTCAATGGACAT | + |
|
Preference number: 2 (lower is better) Translates to: FLSARSFLSMAWSSCGCPQWTLS*IVLNGH Trigger: ATGTCCATTGAGTACAATTCAAGACAGTGTCCATTG...AGGGCAGCCACATGAGGACCAAGCCATGGACAGAAAGCTCCTCGCTGAAAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTCTGTGCACCTGTGTGCATGTCAAAGGCTTCCACACAGAGGGGCCACACATGCAATGGACACTGTCTTaGATTGTACTCAATGGACAT | + |
|
Preference number: 2 (lower is better) Translates to: CLCTCVHVKGFHTEGPHMQWTLS*IVLNGH Trigger: ATGTCCATTGAGTACAATTCAAGACAGTGTCCATTG...CATGTGTGGCCCCTCTGTGTGGAAGCCTTTGACATGCACACAGGTGCACAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTGGCTCATTCCCTTCCTCTCAACCCCCTACAGGTACACTCTTCCCAAACAGTGATAATCAATGGGCATaGCAGCCTCTAAAAAGACAC | + |
|
Preference number: 2 (lower is better) Translates to: PGSFPSSQPPTGTLFPNSDNQWA*QPLKRH Trigger: GTGTCTTTTTAGAGGCTGTCATGCCCATTGATTATC...ACTGTTTGGGAAGAGTGTACCTGTAGGGGGTTGAGAGGAAGGGAATGAGCCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTGTCAGACCAAATCATATAGTGGAGAACTTGCCACCAGCCCACCGAAGCACAGGTTCCACCAACTGGTaGCCAAGCATTCAAACATGT | + |
|
Preference number: 2 (lower is better) Translates to: CVRPNHIVENLPPAHRSTGSTNW*PSIQTC Trigger: ACATGTTTGAATGCTTGGTCACCAGTTGGTGGAACC...TGTGCTTCGGTGGGCTGGTGGCAAGTTCTCCACTATATGATTTGGTCTGACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCTTTTCTCCACTCTGCATGCTGCTGAGTTGTTGGTACATTCACTTGATTCCTAAAGCCCATCCCCAGTaGCACTCCTTCTCCAACAAG | + |
|
Preference number: 2 (lower is better) Translates to: GFSPLCMLLSCWYIHLIPKAHPQ*HSFSNK Trigger: CTTGTTGGAGAAGGAGTGTCACTGGGGATGGGCTTT...AGGAATCAAGTGAATGTACCAACAACTCAGCAGCATGCAGAGTGGAGAAAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAAGCTTTGAGGGAAACAAAAAGTTGCCGAGGATATTCCAACGTCCACTTAAAAGCAGGAAGAGAGAGTaGGGCAGGGCCTGGTTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: QSFEGNKKLPRIFQRPLKSRKRE*GRAWFG Trigger: CCCAAACCAGGCCCTGCCTCACTCTCTCTTCCTGCT...TTTAAGTGGACGTTGGAATATCCTCGGCAACTTTTTGTTTCCCTCAAAGCTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAGCTCCCACCACCTCATTCCATTCTAAATGTCCCCTGCAGTCCTCTTACTACGATGTCTTTGCACACTaGAACTCCCTTGGAATGCAG | + |
|
Preference number: 2 (lower is better) Translates to: TAPTTSFHSKCPLQSSYYDVFAH*NSLGMQ Trigger: CTGCATTCCAAGGGAGTTTCAGTGTGCAAAGACATC...GTAGTAAGAGGACTGCAGGGGACATTTAGAATGGAATGAGGTGGTGGGAGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCTTTTCTCCACTCTGCATGCTGCTGAGTTGTTGGTACATTCACTTGATTCCTCCCTTCGAGGTCAGCTaGTCACTGGTCATTTTGACC | + |
|
Preference number: 2 (lower is better) Translates to: GFSPLCMLLSCWYIHLIPPFEVS*SLVILT Trigger: GGTCAAAATGACCAGTGAGCAGCTGACCTCGAAGGG...AGGAATCAAGTGAATGTACCAACAACTCAGCAGCATGCAGAGTGGAGAAAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTCTGTGCACCTGTGTGCATGTCAAAGGCTTCCACACAGAGGGGCCACACATGAGCTTGGTTGGTGTTTaGCTTAGTCACTGTTCTATT | + |
|
Preference number: 2 (lower is better) Translates to: CLCTCVHVKGFHTEGPHMSLVGV*LSHCSI Trigger: AATAGAACAGTGACTAAGGCAAACACCAACCAAGCT...CATGTGTGGCCCCTCTGTGTGGAAGCCTTTGACATGCACACAGGTGCACAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTGTGCACCTGTGTGCATGTCAAAGGCTTCCACACAGAGGGGCCACACATGTGATAATTACCCTGTATTaGAAACACCCAGGCCTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: SVHLCACQRLPHRGATHVIITLY*KHPGLE Trigger: TTCAAGGCCTGGGTGTTTGCAATACAGGGTAATTAT...CACATGTGTGGCCCCTCTGTGTGGAAGCCTTTGACATGCACACAGGTGCACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAAAGCCATGGCAACTATCACAAATCCTGGATCCTAAATGCCAGAGTCCATTGAGAGTTGTGGCTCTCTaGGGCATCATGTCCACTGCG | + |
|
Preference number: 2 (lower is better) Translates to: QKPWQLSQILDPKCQSPLRVVAL*GIMSTA Trigger: CGCAGTGGACATGATGCCCCAGAGAGCCACAACTCT...CAATGGACTCTGGCATTTAGGATCCAGGATTTGTGATAGTTGCCATGGCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGTTGAACTCAGTTGAGAGTTGTGGCTCTCTGGGGCATCATGTCCACTGCGTGCAATGGACACTGTCTTaGATTGTACTCAATGGACAT | + |
|
Preference number: 2 (lower is better) Translates to: QLNSVESCGSLGHHVHCVQWTLS*IVLNGH Trigger: ATGTCCATTGAGTACAATTCAAGACAGTGTCCATTG...CACGCAGTGGACATGATGCCCCAGAGAGCCACAACTCTCAACTGAGTTCAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTGGCTCATTCCCTTCCTCTCAACCCCCTACAGGTACACTCTTCCCAAACAGTAGCTTGGTTGGTGTTTaGCTTAGTCACTGTTCTATT | + |
|
Preference number: 2 (lower is better) Translates to: PGSFPSSQPPTGTLFPNSSLVGV*LSHCSI Trigger: AATAGAACAGTGACTAAGGCAAACACCAACCAAGCT...ACTGTTTGGGAAGAGTGTACCTGTAGGGGGTTGAGAGGAAGGGAATGAGCCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCTTTTCTCCACTCTGCATGCTGCTGAGTTGTTGGTACATTCACTTGATTCCTGAAACTCCCTTGGAATaGAGGGTACCTGGCTCATTC | + |
|
Preference number: 2 (lower is better) Translates to: GFSPLCMLLSCWYIHLIPETPLE*RVPGSF Trigger: GAATGAGCCAGGTACCCTGCATTCCAAGGGAGTTTC...AGGAATCAAGTGAATGTACCAACAACTCAGCAGCATGCAGAGTGGAGAAAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTATCATAGGAGGGATAGGACCAGGAAGAGCTGGGGTCTACAATAACACATTCTTTCTGTCCATGGCTTaGTCCTCATGTGGCTGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: IIIGGIGPGRAGVYNNTFFLSMA*SSCGCP Trigger: AGGGCAGCCACATGAGGACCAAGCCATGGACAGAAA...GAATGTGTTATTGTAGACCCCAGCTCTTCCTGGTCCTATCCCTCCTATGATAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAAAGCCATGGCAACTATCACAAATCCTGGATCCTAAATGCCAGAGTCCATTGTTGAAAGCAGGCTGCTaGCATCTCAGGTCTCCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: QKPWQLSQILDPKCQSPLLKAGC*HLRSPW Trigger: CCAAGGAGACCTGAGATGCCAGCAGCCTGCTTTCAA...CAATGGACTCTGGCATTTAGGATCCAGGATTTGTGATAGTTGCCATGGCTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CCA 90 bp | GACTCTTTAGAAAATACTGATTCCAAACGCTTCCCTGAATCTTCTGACACCAGCAGAGTTGTGGCTCTCTaGGGCATCATGTCCACTGCG | + |
|
Preference number: 2 (lower is better) Translates to: DSLENTDSKRFPESSDTSRVVAL*GIMSTA Trigger: CGCAGTGGACATGATGCCCCAGAGAGCCACAACTCT...GCTGGTGTCAGAAGATTCAGGGAAGCGTTTGGAATCAGTATTTTCTAAAGAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGCTCCCACCACCTCATTCCATTCTAAATGTCCCCTGCAGTCCTCTTACTACTCAGCCCTTCCTCTCTaGGATAGAATTATAAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: TAPTTSFHSKCPLQSSYYSALPL*DRIIRL Trigger: CAGCCTTATAATTCTATCCCAGAGAGGAAGGGCTGA...GTAGTAAGAGGACTGCAGGGGACATTTAGAATGGAATGAGGTGGTGGGAGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCTTTTCTCCACTCTGCATGCTGCTGAGTTGTTGGTACATTCACTTGATTCCTACACTGAAACTCCCTTaGAATGCAGGGTACCTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: GFSPLCMLLSCWYIHLIPTLKLP*NAGYLA Trigger: AGCCAGGTACCCTGCATTCCAAGGGAGTTTCAGTGT...AGGAATCAAGTGAATGTACCAACAACTCAGCAGCATGCAGAGTGGAGAAAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR GCA 90 bp | GACTCTTTAGAAAATACTGATTCCAAACGCTTCCCTGAATCTTCTGACACCAGCCCCTTCGAGGTCAGCTaGTCACTGGTCATTTTGACC | + |
|
Preference number: 2 (lower is better) Translates to: DSLENTDSKRFPESSDTSPFEVS*SLVILT Trigger: GGTCAAAATGACCAGTGAGCAGCTGACCTCGAAGGG...GCTGGTGTCAGAAGATTCAGGGAAGCGTTTGGAATCAGTATTTTCTAAAGAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAAAGCCATGGCAACTATCACAAATCCTGGATCCTAAATGCCAGAGTCCATTGGGCCTTCAGGACAGTTaGGACAACAGGAAAAGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: QKPWQLSQILDPKCQSPLGLQDS*DNRKSL Trigger: CAAGCTTTTCCTGTTGTCCCAACTGTCCTGAAGGCC...CAATGGACTCTGGCATTTAGGATCCAGGATTTGTGATAGTTGCCATGGCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCTTTTCTCCACTCTGCATGCTGCTGAGTTGTTGGTACATTCACTTGATTCCTAGTGGAAGACAGCGATaGTGCTTTCCTGACTTAGAA | + |
|
Preference number: 2 (lower is better) Translates to: GFSPLCMLLSCWYIHLIPSGRQR*CFPDLE Trigger: TTCTAAGTCAGGAAAGCAGCATCGCTGTCTTCCACT...AGGAATCAAGTGAATGTACCAACAACTCAGCAGCATGCAGAGTGGAGAAAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCTTTTCTCCACTCTGCATGCTGCTGAGTTGTTGGTACATTCACTTGATTCCTACGTCTAGATGTCTTTaGACACTGAAACTCCCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: GFSPLCMLLSCWYIHLIPTSRCL*TLKLPW Trigger: CCAAGGGAGTTTCAGTGTGCAAAGACATCTAGACGT...AGGAATCAAGTGAATGTACCAACAACTCAGCAGCATGCAGAGTGGAGAAAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCTTTTCTCCACTCTGCATGCTGCTGAGTTGTTGGTACATTCACTTGATTCCTTGCGGGAGGCTTCGCTaGAAACATAGACTCAAAATT | + |
|
Preference number: 2 (lower is better) Translates to: GFSPLCMLLSCWYIHLIPCGRLR*KHRLKI Trigger: AATTTTGAGTCTATGTTTGCAGCGAAGCCTCCCGCA...AGGAATCAAGTGAATGTACCAACAACTCAGCAGCATGCAGAGTGGAGAAAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCTTGACCAGAAGGAAAGATTTTAAACCAATTCAAACAGTTCCACTCCAGCCCTTTCTGTCCATGGCTTaGTCCTCATGTGGCTGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: FLTRRKDFKPIQTVPLQPFLSMA*SSCGCP Trigger: AGGGCAGCCACATGAGGACCAAGCCATGGACAGAAA...GGGCTGGAGTGGAACTGTTTGAATTGGTTTAAAATCTTTCCTTCTGGTCAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CCA 90 bp | GACTCTTTAGAAAATACTGATTCCAAACGCTTCCCTGAATCTTCTGACACCAGCTCCAAGGACTGTGAGTaGAAGACAGCGATGCTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: DSLENTDSKRFPESSDTSSKDCE*KTAMLL Trigger: AAGCAGCATCGCTGTCTTCCACTCACAGTCCTTGGA...GCTGGTGTCAGAAGATTCAGGGAAGCGTTTGGAATCAGTATTTTCTAAAGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGCTCCCACCACCTCATTCCATTCTAAATGTCCCCTGCAGTCCTCTTACTACAACTATCACAAATCCTaGATCCTAAATGCCAGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: TAPTTSFHSKCPLQSSYYNYHKS*ILNARV Trigger: GACTCTGGCATTTAGGATCCAGGATTTGTGATAGTT...GTAGTAAGAGGACTGCAGGGGACATTTAGAATGGAATGAGGTGGTGGGAGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTGGCTCATTCCCTTCCTCTCAACCCCCTACAGGTACACTCTTCCCAAACAGTAATTGGCAAATACACTaGGGATACAAAAACATCTCT | + |
|
Preference number: 2 (lower is better) Translates to: PGSFPSSQPPTGTLFPNSNWQIH*GYKNIS Trigger: AGAGATGTTTTTGTATCCCCAGTGTATTTGCCAATT...ACTGTTTGGGAAGAGTGTACCTGTAGGGGGTTGAGAGGAAGGGAATGAGCCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGCTCCCACCACCTCATTCCATTCTAAATGTCCCCTGCAGTCCTCTTACTACAGGGAACTGATAAATTaGCAAATACACTGGGGATAC | + |
|
Preference number: 2 (lower is better) Translates to: TAPTTSFHSKCPLQSSYYRELIN*QIHWGY Trigger: GTATCCCCAGTGTATTTGCCAATTTATCAGTTCCCT...GTAGTAAGAGGACTGCAGGGGACATTTAGAATGGAATGAGGTGGTGGGAGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCTTTTCTCCACTCTGCATGCTGCTGAGTTGTTGGTACATTCACTTGATTCCTCAAAGTTCTGTCCATTaGGAGGATCCAACAATGATG | + |
|
Preference number: 2 (lower is better) Translates to: GFSPLCMLLSCWYIHLIPQSSVH*EDPTMM Trigger: CATCATTGTTGGATCCTCTCAATGGACAGAACTTTG...AGGAATCAAGTGAATGTACCAACAACTCAGCAGCATGCAGAGTGGAGAAAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR TCA 90 bp | GACTCTTTAGAAAATACTGATTCCAAACGCTTCCCTGAATCTTCTGACACCAGCCACTCTGCATGCTGCTaGGTTGTTGGTACATTCACT | + |
|
Preference number: 2 (lower is better) Translates to: DSLENTDSKRFPESSDTSHSACC*VVGTFT Trigger: AGTGAATGTACCAACAACTCAGCAGCATGCAGAGTG...GCTGGTGTCAGAAGATTCAGGGAAGCGTTTGGAATCAGTATTTTCTAAAGAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCTTTTCTCCACTCTGCATGCTGCTGAGTTGTTGGTACATTCACTTGATTCCTCATTCCCCTAAAAGCTaGAAGATAAATGTATGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: GFSPLCMLLSCWYIHLIPHSPKS*KINVWS Trigger: GGACCATACATTTATCTTGCAGCTTTTAGGGGAATG...AGGAATCAAGTGAATGTACCAACAACTCAGCAGCATGCAGAGTGGAGAAAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR GCA 90 bp | GACTCTTTAGAAAATACTGATTCCAAACGCTTCCCTGAATCTTCTGACACCAGCATCCTGGATCCTAAATaGCAGAGTCCATTGCAGACT | + |
|
Preference number: 2 (lower is better) Translates to: DSLENTDSKRFPESSDTSILDPK*QSPLQT Trigger: AGTCTGCAATGGACTCTGGCATTTAGGATCCAGGAT...GCTGGTGTCAGAAGATTCAGGGAAGCGTTTGGAATCAGTATTTTCTAAAGAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CCA 90 bp | GACTCTTTAGAAAATACTGATTCCAAACGCTTCCCTGAATCTTCTGACACCAGCTCAGCCCTTCCTCTCTaGGATAGAATTATAAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: DSLENTDSKRFPESSDTSSALPL*DRIIRL Trigger: CAGCCTTATAATTCTATCCCAGAGAGGAAGGGCTGA...GCTGGTGTCAGAAGATTCAGGGAAGCGTTTGGAATCAGTATTTTCTAAAGAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR CAA 90 bp | GGCATCTCAGGTCTCCTTGGGGTACTTCTCATGCTTAAGTTCTTCTaGACCAGAAGGAAAGATTTTAAACCAATTCAAACAGTTCCACTC | + |
|
Preference number: 2 (lower is better) Translates to: GISGLLGVLLMLKFF*TRRKDFKPIQTVPL Trigger: GAGTGGAACTGTTTGAATTGGTTTAAAATCTTTCCTTCTGGTCAAGAAGAACTTAAGCATGAGAAGTACCCCAAGGAGACCTGAGATGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAAGCTTTGAGGGAAACAAAAAGTTGCCGAGGATATTCCAACGTCCACTTAAATGGACAAAACCCAACTaGGAGCTGCTCTGTGAAATA | + |
|
Preference number: 2 (lower is better) Translates to: QSFEGNKKLPRIFQRPLKWTKPN*ELLCEI Trigger: TATTTCACAGAGCAGCTCTCAGTTGGGTTTTGTCCA...TTTAAGTGGACGTTGGAATATCCTCGGCAACTTTTTGTTTCCCTCAAAGCTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR GCA 90 bp | CAAAGCTTTGAGGGAAACAAAAAGTTGCCGAGGATATTCCAACGTCCACTTAAAACGTCTAGATGTCTTTaGACACTGAAACTCCCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: QSFEGNKKLPRIFQRPLKTSRCL*TLKLPW Trigger: CCAAGGGAGTTTCAGTGTGCAAAGACATCTAGACGT...TTTAAGTGGACGTTGGAATATCCTCGGCAACTTTTTGTTTCCCTCAAAGCTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAAGCTTTGAGGGAAACAAAAAGTTGCCGAGGATATTCCAACGTCCACTTAAAAGCAGAGAACCTACATaGAGGAAGCAAAGACATGGA | + |
|
Preference number: 2 (lower is better) Translates to: QSFEGNKKLPRIFQRPLKSREPT*RKQRHG Trigger: TCCATGTCTTTGCTTCCTCCATGTAGGTTCTCTGCT...TTTAAGTGGACGTTGGAATATCCTCGGCAACTTTTTGTTTCCCTCAAAGCTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAAGCTTTGAGGGAAACAAAAAGTTGCCGAGGATATTCCAACGTCCACTTAAACTCTCCCAGGGCAAATaGAAGATATTAAACACAGCT | + |
|
Preference number: 2 (lower is better) Translates to: QSFEGNKKLPRIFQRPLKLSQGK*KILNTA Trigger: AGCTGTGTTTAATATCTTTCATTTGCCCTGGGAGAG...TTTAAGTGGACGTTGGAATATCCTCGGCAACTTTTTGTTTCCCTCAAAGCTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR CAA 90 bp | GTTATCCTTAATAATACACAAGAAAGTAAAACTCAACAGGCTTCCTaGAGAGCCCAGGACAAGTGTTACTTGAACCTAATCTCAAAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: VILNNTQESKTQQAS*RAQDKCYLNLISKK Trigger: TTTCTTTGAGATTAGGTTCAAGTAACACTTGTCCTGGGCTCTCAAGGAAGCCTGTTGAGTTTTACTTTCTTGTGTATTATTAAGGATAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR CAA 90 bp | ATACACATTACATACACGTATAGAAATAATTCAAAGTTCTGTCCATaGAGAGGATCCAACAATGATGATACCTCAAAAGCCATGGCAACT | + |
|
Preference number: 2 (lower is better) Translates to: IHITYTYRNNSKFCP*RGSNNDDTSKAMAT Trigger: AGTTGCCATGGCTTTTGAGGTATCATCATTGTTGGATCCTCTCAATGGACAGAACTTTGAATTATTTCTATACGTGTATGTAATGTGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTCTTCTGAGAGGCTGTCTTGAAAGCAGGCTGCTGGCATCTCAGGTCTCCTTGCTTTCTGTCCATGGCTaGGTCCTCATGTGGCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: PLLRGCLESRLLASQVSLLSVHG*VLMWLP Trigger: GGGCAGCCACATGAGGACCAAGCCATGGACAGAAAG...CAAGGAGACCTGAGATGCCAGCAGCCTGCTTTCAAGACAGCCTCTCAGAAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR CCA 72 bp | GAGAGCCCCAGCCTAGGAAGGAGTCAGTGCTCCACATaGAGCTACCCTTGCCCACACTCTCAGTTTGAATGG | + |
|
Preference number: 3 (lower is better) Translates to: ESPSLGRSQCST*SYPCPHSQFEW Trigger: CCATTCAAACTGAGAGTGTGGGCAAGGGTAGCTCCATGTGGAGCACTGACTCCTTCCTAGGCTGGGGCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR TCA 72 bp | GGAGCTACCCTTGCCCACACTCTCAGTTTGAATGGGTaGGAAGACTGGCACACAGCAGTGTCTGTGCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: GATLAHTLSLNG*EDWHTAVSVHL Trigger: CAGGTGCACAGACACTGCTGTGTGCCAGTCTTCTCACCCATTCAAACTGAGAGTGTGGGCAAGGGTAGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR GCA 72 bp | GGGGAGTCACCGGAGGCAACCTGCGGGAGGCTTCGCTaGAAACATAGACTCAAAATTGGCCAACGTATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GESPEATCGRLR*KHRLKIGQRML Trigger: AAGCATACGTTGGCCAATTTTGAGTCTATGTTTGCAGCGAAGCCTCCCGCAGGTTGCCTCCGGTGACTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR TCA 72 bp | CTCCACATGGAGCTACCCTTGCCCACACTCTCAGTTTaGATGGGTGAGAAGACTGGCACACAGCAGTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LHMELPLPTLSV*MGEKTGTQQCL Trigger: CAGACACTGCTGTGTGCCAGTCTTCTCACCCATTCAAACTGAGAGTGTGGGCAAGGGTAGCTCCATGTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR GCA 72 bp | AGAGTTGTGGCTCTCTGGGGCATCATGTCCACTGCGTaGTGTAACATCCCACATTTCTCTGTTGCCCACCAG | + |
|
Preference number: 3 (lower is better) Translates to: RVVALWGIMSTA*CNIPHFSVAHQ Trigger: CTGGTGGGCAACAGAGAAATGTGGGATGTTACAGCACGCAGTGGACATGATGCCCCAGAGAGCCACAACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR CCA 72 bp | AGCGAGGAGCTTTCTGTCCATGGCTTGGTCCTCATGTaGCTGCCCTGGCTCAATGGACACTGTCTTGAATTG | + |
|
Preference number: 3 (lower is better) Translates to: SEELSVHGLVLM*LPWLNGHCLEL Trigger: CAATTCAAGACAGTGTCCATTGAGCCAGGGCAGCCACATGAGGACCAAGCCATGGACAGAAAGCTCCTCGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR CCA 72 bp | GTTTTCCTTTCAGCGAGGAGCTTTCTGTCCATGGCTTaGTCCTCATGTGGCTGCCCTGGCTCAATGGACACT | + |
|
Preference number: 3 (lower is better) Translates to: VFLSARSFLSMA*SSCGCPGSMDT Trigger: AGTGTCCATTGAGCCAGGGCAGCCACATGAGGACCAAGCCATGGACAGAAAGCTCCTCGCTGAAAGGAAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR CCA 72 bp | TGCCGGAGAAGGACATCTAAGGGCAATGGGCACTGGTaGAACTGGGAGATGACCTCCAAGAAGGGAACTGAT | + |
|
Preference number: 3 (lower is better) Translates to: CRRRTSKGNGHW*NWEMTSKKGTD Trigger: ATCAGTTCCCTTCTTGGAGGTCATCTCCCAGTTCCACCAGTGCCCATTGCCCTTAGATGTCCTTCTCCGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR CCA 72 bp | CTTTGCCGGAGAAGGACATCTAAGGGCAATGGGCACTaGTGGAACTGGGAGATGACCTCCAAGAAGGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: LCRRRTSKGNGH*WNWEMTSKKGT Trigger: AGTTCCCTTCTTGGAGGTCATCTCCCAGTTCCACCAGTGCCCATTGCCCTTAGATGTCCTTCTCCGGCAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTCAGGAAGCCTCTTGTCAGTTGAACTCAGTTGAGAGTTGTGGCTCTCTGGGGTCCCACATTTCTCTGTaGCCCACCAGGCCTCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SQEASCQLNSVESCGSLGSHISL*PTRPLL Trigger: CAGAAGAGGCCTGGTGGGCAACAGAGAAATGTGGGA...CCCCAGAGAGCCACAACTCTCAACTGAGTTCAACTGACAAGAGGCTTCCTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR TCA 72 bp | GGGCCTGGTTTGGGATTCCTCAAAGCCCATCCCCAGTaGCACTCCTTCTCCAACAAGGCCATACCTTCTAAT | + |
|
Preference number: 3 (lower is better) Translates to: GPGLGFLKAHPQ*HSFSNKAIPSN Trigger: ATTAGAAGGTATGGCCTTGTTGGAGAAGGAGTGTCACTGGGGATGGGCTTTGAGGAATCCCAAACCAGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR GCA 72 bp | AGAACCTACATGGAGGAAGCAAAGACATGGAGCCTTTaGCGGAGAAGGACATCTAAGGGCAATGGGCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: RTYMEEAKTWSL*RRRTSKGNGHW Trigger: CCAGTGCCCATTGCCCTTAGATGTCCTTCTCCGGCAAAGGCTCCATGTCTTTGCTTCCTCCATGTAGGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR GCA 72 bp | CAGCTCCCACCACCTCATTCCATTCTAAATGTCCCCTaGAGTCCTCTTACTACAGCAATAGAGGGGCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: QLPPPHSILNVP*SPLTTAIEGPW Trigger: CCATGGCCCCTCTATTGCTGTAGTAAGAGGACTGCAGGGGACATTTAGAATGGAATGAGGTGGTGGGAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR CCA 72 bp | ACATGGAGCTACCCTTGCCCACACTCTCAGTTTGAATaGGTGAGAAGACTGGCACACAGCAGTGTCTGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: TWSYPCPHSQFE*VRRLAHSSVCA Trigger: TGCACAGACACTGCTGTGTGCCAGTCTTCTCACCCATTCAAACTGAGAGTGTGGGCAAGGGTAGCTCCATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR CCA 72 bp | GCCACGTCTAGATGTCTTTGCACACTGAAACTCCCTTaGAATGCAGGGTACCTGGCTCATTCCCTTCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: ATSRCLCTLKLP*NAGYLAHSLPL Trigger: GAGAGGAAGGGAATGAGCCAGGTACCCTGCATTCCAAGGGAGTTTCAGTGTGCAAAGACATCTAGACGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGTTGTGGCTCTCTGGGGCATCATGTCCACTGCGTGCTGTAACATCCCACATTGCTCACTGGTCATTTaGACCCTGATCCAAAACGAC | + |
|
Preference number: 3 (lower is better) Translates to: RVVALWGIMSTACCNIPHCSLVI*TLIQND Trigger: GTCGTTTTGGATCAGGGTCAAAATGACCAGTGAGCA...ATGTGGGATGTTACAGCACGCAGTGGACATGATGCCCCAGAGAGCCACAACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGCTCATTCCCTTCCTCTCAACCCCCTACAGGTACACTCTTCCCAAACAGTTGCTCACTGGTCATTTaGACCCTGATCCAAAACGAC | + |
|
Preference number: 3 (lower is better) Translates to: PGSFPSSQPPTGTLFPNSCSLVI*TLIQND Trigger: GTCGTTTTGGATCAGGGTCAAAATGACCAGTGAGCA...ACTGTTTGGGAAGAGTGTACCTGTAGGGGGTTGAGAGGAAGGGAATGAGCCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTCAGACCAAATCATATAGTGGAGAACTTGCCACCAGCCCACCGAAGCACAGGGCCTTCAGGACAGTaGGGACAACAGGAAAAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: CVRPNHIVENLPPAHRSTGPSGQ*GQQEKL Trigger: AAGCTTTTCCTGTTGTCCCAACTGTCCTGAAGGCCC...TGTGCTTCGGTGGGCTGGTGGCAAGTTCTCCACTATATGATTTGGTCTGACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR TCA 72 bp | GTTGGCTCATGGTTAGTCAGGAAGCCTCTTGTCAGTTaGACTCAGTTGAGAGTTGTGGCTCTCTGGGGCATC | + |
|
Preference number: 3 (lower is better) Translates to: VGSWLVRKPLVS*TQLRVVALWGI Trigger: GATGCCCCAGAGAGCCACAACTCTCAACTGAGTTCAACTGACAAGAGGCTTCCTGACTAACCATGAGCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR GCA 72 bp | AGGAGCTTTCTGTCCATGGCTTGGTCCTCATGTGGCTaGCCTGGCTCAATGGACACTGTCTTGAATTGTACT | + |
|
Preference number: 3 (lower is better) Translates to: RSFLSMAWSSCG*PGSMDTVLNCT Trigger: AGTACAATTCAAGACAGTGTCCATTGAGCCAGGGCAGCCACATGAGGACCAAGCCATGGACAGAAAGCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGAGGCTGTCTTGAAAGCAGGCTGCTGGCATCTCAGGTCTCCTTGGGGTACTCAATGGACACTGTCTaGAATTGTACTCAATGGACA | + |
|
Preference number: 3 (lower is better) Translates to: LRGCLESRLLASQVSLGYSMDTV*NCTQWT Trigger: TGTCCATTGAGTACAATTCAAGACAGTGTCCATTGA...GTACCCCAAGGAGACCTGAGATGCCAGCAGCCTGCTTTCAAGACAGCCTCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR TCA 72 bp | AGTCCTCTTACTACAGCAATAGAGGGGCCATGGCATTaGGGCCAGGTAGTCTTGGATTGCTGTACAGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SPLTTAIEGPWH*GQVVLDCCTVS Trigger: AGACACTGTACAGCAATCCAAGACTACCTGGCCTCAATGCCATGGCCCCTCTATTGCTGTAGTAAGAGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR CCA 72 bp | CTTTCTGTCCATGGCTTGGTCCTCATGTGGCTGCCCTaGCTCAATGGACACTGTCTTGAATTGTACTCAATG | + |
|
Preference number: 3 (lower is better) Translates to: LSVHGLVLMWLP*LNGHCLELYSM Trigger: CATTGAGTACAATTCAAGACAGTGTCCATTGAGCCAGGGCAGCCACATGAGGACCAAGCCATGGACAGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTTTCAGCGAGGAGCTTTCTGTCCATGGCTTGGTCCTCATGTGGCTGCCCTTCAATGGACACTGTCTaGAATTGTACTCAATGGACA | + |
|
Preference number: 3 (lower is better) Translates to: FLSARSFLSMAWSSCGCPSMDTV*NCTQWT Trigger: TGTCCATTGAGTACAATTCAAGACAGTGTCCATTGA...AGGGCAGCCACATGAGGACCAAGCCATGGACAGAAAGCTCCTCGCTGAAAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAAAGCCATGGCAACTATCACAAATCCTGGATCCTAAATGCCAGAGTCCATTGTCCCACATTTCTCTGTaGCCCACCAGGCCTCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: QKPWQLSQILDPKCQSPLSHISL*PTRPLL Trigger: CAGAAGAGGCCTGGTGGGCAACAGAGAAATGTGGGA...CAATGGACTCTGGCATTTAGGATCCAGGATTTGTGATAGTTGCCATGGCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CAA 90 bp | ACATGGAGCCTTTGCCGGAGAAGGACATCTAAGGGCAATGGGCACTGGTGGAACTCAAAGTTCTGTCCATaGAGAGGATCCAACAATGAT | + |
|
Preference number: 3 (lower is better) Translates to: TWSLCRRRTSKGNGHWWNSKFCP*RGSNND Trigger: ATCATTGTTGGATCCTCTCAATGGACAGAACTTTGA...GTTCCACCAGTGCCCATTGCCCTTAGATGTCCTTCTCCGGCAAAGGCTCCATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCTCCCACCACCTCATTCCATTCTAAATGTCCCCTGCAGTCCTCTTACTACCAGTTCACTTCCTCTTaGAAAATGTCTGGCTGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: TAPTTSFHSKCPLQSSYYQFTSS*KMSGWC Trigger: GCACCAGCCAGACATTTTCAAAGAGGAAGTGAACTG...GTAGTAAGAGGACTGCAGGGGACATTTAGAATGGAATGAGGTGGTGGGAGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR TCA 72 bp | ACTGGTGACCAAGCATTCAAACATGTGAGCCTGTGGTaGCCATCCTCATTCAAACCATCACAGCATCCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: TGDQAFKHVSLW*PSSFKPSQHPR Trigger: CCTTGGATGCTGTGATGGTTTGAATGAGGATGGTCACCACAGGCTCACATGTTTGAATGCTTGGTCACCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR GCA 72 bp | CAGCATCCAAGGACTGTGAGTGGAAGACAGCGATGCTaGTTTCCTGACTTAGAAGTTTGCTCTGCTGTGATA | + |
|
Preference number: 3 (lower is better) Translates to: QHPRTVSGRQRC*FPDLEVCSAVI Trigger: TATCACAGCAGAGCAAACTTCTAAGTCAGGAAAGCAGCATCGCTGTCTTCCACTCACAGTCCTTGGATGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR GCA 72 bp | GCATTCTGTGGCATTGCAGCCCATTCCCCTAAAAGCTaGAAGATAAATGTATGGTCCTATCCAGTACCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: AFCGIAAHSPKS*KINVWSYPVPG Trigger: GCCAGGTACTGGATAGGACCATACATTTATCTTGCAGCTTTTAGGGGAATGGGCTGCAATGCCACAGAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR CCA 72 bp | GCAGCCCATTCCCCTAAAAGCTGCAAGATAAATGTATaGTCCTATCCAGTACCTGGCTCCTTGTCATGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: AAHSPKSCKINV*SYPVPGSLSCR Trigger: CCTACATGACAAGGAGCCAGGTACTGGATAGGACCATACATTTATCTTGCAGCTTTTAGGGGAATGGGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR CCA 72 bp | TCAGCCCTTCCTCTCTGGGATAGAATTATAAGGCTGTaGCATTCTGTGGCATTGCAGCCCATTCCCCTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SALPLWDRIIRL*HSVALQPIPLK Trigger: TTTTAGGGGAATGGGCTGCAATGCCACAGAATGCCACAGCCTTATAATTCTATCCCAGAGAGGAAGGGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR CCA 72 bp | AGAAGGACATCTAAGGGCAATGGGCACTGGTGGAACTaGGAGATGACCTCCAAGAAGGGAACTGATAAATTG | + |
|
Preference number: 3 (lower is better) Translates to: RRTSKGNGHWWN*EMTSKKGTDKL Trigger: CAATTTATCAGTTCCCTTCTTGGAGGTCATCTCCCAGTTCCACCAGTGCCCATTGCCCTTAGATGTCCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR CCA 72 bp | TCGAAGAACCCATGTTTAAGGAGCAGAGAACCTACATaGAGGAAGCAAAGACATGGAGCCTTTGCCGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SKNPCLRSREPT*RKQRHGAFAGE Trigger: TTCTCCGGCAAAGGCTCCATGTCTTTGCTTCCTCCATGTAGGTTCTCTGCTCCTTAAACATGGGTTCTTCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR CCA 72 bp | CAGGGCTTTTCTCCACTCTGCATGCTGCTGAGTTGTTaGTACATTCACTTGATTCCTGATAATGGGCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: QGFSPLCMLLSC*YIHLIPDNGPG Trigger: TCCAGGCCCATTATCAGGAATCAAGTGAATGTACCAACAACTCAGCAGCATGCAGAGTGGAGAAAAGCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CAA 90 bp | ACATGGAGCCTTTGCCGGAGAAGGACATCTAAGGGCAATGGGCACTGGTGGAACTGTGTGTATATTTGTTaGTATATAGGGGTGGGTACA | + |
|
Preference number: 3 (lower is better) Translates to: TWSLCRRRTSKGNGHWWNCVYIC*YIGVGT Trigger: TGTACCCACCCCTATATACAAACAAATATACACACA...GTTCCACCAGTGCCCATTGCCCTTAGATGTCCTTCTCCGGCAAAGGCTCCATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGCTCATTCCCTTCCTCTCAACCCCCTACAGGTACACTCTTCCCAAACAGTCCATTAATTGAGGGCTaGCTAATAGTTTTAGAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: PGSFPSSQPPTGTLFPNSPLIEG*LIVLEG Trigger: ACCCTCTAAAACTATTAGCAAGCCCTCAATTAATGG...ACTGTTTGGGAAGAGTGTACCTGTAGGGGGTTGAGAGGAAGGGAATGAGCCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTCAGACCAAATCATATAGTGGAGAACTTGCCACCAGCCCACCGAAGCACAACAGGAAAAGCTTGGTaGGTGTTTGCCTTAGTCACT | + |
|
Preference number: 3 (lower is better) Translates to: CVRPNHIVENLPPAHRSTTGKAW*VFALVT Trigger: AGTGACTAAGGCAAACACCAACCAAGCTTTTCCTGT...TGTGCTTCGGTGGGCTGGTGGCAAGTTCTCCACTATATGATTTGGTCTGACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CAA 90 bp | ACATGGAGCCTTTGCCGGAGAAGGACATCTAAGGGCAATGGGCACTGGTGGAACAATCTCAAAGAAACATaGGACAAAACCCAACTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: TWSLCRRRTSKGNGHWWNNLKET*DKTQLR Trigger: TCTCAGTTGGGTTTTGTCCAATGTTTCTTTGAGATT...GTTCCACCAGTGCCCATTGCCCTTAGATGTCCTTCTCCGGCAAAGGCTCCATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CAA 90 bp | GACTCTTTAGAAAATACTGATTCCAAACGCTTCCCTGAATCTTCTGACACCAGCCACACTGAAACTCCCTaGGAATGCAGGGTACCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: DSLENTDSKRFPESSDTSHTETP*ECRVPG Trigger: GCCAGGTACCCTGCATTCCAAGGGAGTTTCAGTGTG...GCTGGTGTCAGAAGATTCAGGGAAGCGTTTGGAATCAGTATTTTCTAAAGAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTCAGGAAGCCTCTTGTCAGTTGAACTCAGTTGAGAGTTGTGGCTCTCTGGGGTCAATGGACACTGTCTaGAATTGTACTCAATGGACA | + |
|
Preference number: 3 (lower is better) Translates to: SQEASCQLNSVESCGSLGSMDTV*NCTQWT Trigger: TGTCCATTGAGTACAATTCAAGACAGTGTCCATTGA...CCCCAGAGAGCCACAACTCTCAACTGAGTTCAACTGACAAGAGGCTTCCTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CAA 90 bp | GACTCTTTAGAAAATACTGATTCCAAACGCTTCCCTGAATCTTCTGACACCAGCGGGCCTTCAGGACAGTaGGGACAACAGGAAAAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: DSLENTDSKRFPESSDTSGPSGQ*GQQEKL Trigger: AAGCTTTTCCTGTTGTCCCAACTGTCCTGAAGGCCC...GCTGGTGTCAGAAGATTCAGGGAAGCGTTTGGAATCAGTATTTTCTAAAGAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR TCA 72 bp | AAGGACTGTGAGTGGAAGACAGCGATGCTGCTTTCCTaGCTTAGAAGTTTGCTCTGCTGTGATAGGTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: KDCEWKTAMLLS*LRSLLCCDRCL Trigger: AAGACACCTATCACAGCAGAGCAAACTTCTAAGTCAGGAAAGCAGCATCGCTGTCTTCCACTCACAGTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR TCA 72 bp | CATCTAAGGGCAATGGGCACTGGTGGAACTGGGAGATaGCCTCCAAGAAGGGAACTGATAAATTGGCAAATA | + |
|
Preference number: 3 (lower is better) Translates to: HLRAMGTGGTGR*PPRRELINWQI Trigger: TATTTGCCAATTTATCAGTTCCCTTCTTGGAGGTCATCTCCCAGTTCCACCAGTGCCCATTGCCCTTAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR GCA 72 bp | GGAAGACAGCGATGCTGCTTTCCTGACTTAGAAGTTTaGTCTGCTGTGATAGGTGTCTTTCTTGGGGTAATC | + |
|
Preference number: 3 (lower is better) Translates to: GRQRCCFPDLEV*SAVIGVFLGVI Trigger: GATTACCCCAAGAAAGACACCTATCACAGCAGAGCAAACTTCTAAGTCAGGAAAGCAGCATCGCTGTCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR GCA 72 bp | CAAAACTATGAATGGCATGCCACGTCTAGATGTCTTTaGACACTGAAACTCCCTTGGAATGCAGGGTACCTG | + |
|
Preference number: 3 (lower is better) Translates to: QNYEWHATSRCL*TLKLPWNAGYL Trigger: CAGGTACCCTGCATTCCAAGGGAGTTTCAGTGTGCAAAGACATCTAGACGTGGCATGCCATTCATAGTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR CCA 72 bp | GGGGCCTTCAGGACAGTTGGGACAACAGGAAAAGCTTaGTTGGTGTTTGCCTTAGTCACTGTTCTATTACTA | + |
|
Preference number: 3 (lower is better) Translates to: GAFRTVGTTGKA*LVFALVTVLLL Trigger: TAGTAATAGAACAGTGACTAAGGCAAACACCAACCAAGCTTTTCCTGTTGTCCCAACTGTCCTGAAGGCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR GCA 72 bp | AAGCCATGGCAACTATCACAAATCCTGGATCCTAAATaGCAGAGTCCATTGCAGACTCTCTTCGAGACTTGT | + |
|
Preference number: 3 (lower is better) Translates to: KPWQLSQILDPK*QSPLQTLFETC Trigger: ACAAGTCTCGAAGAGAGTCTGCAATGGACTCTGGCATTTAGGATCCAGGATTTGTGATAGTTGCCATGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR GCA 72 bp | ATTCTGACAACTCTGGCTCAGGGCTTTTCTCCACTCTaGATGCTGCTGAGTTGTTGGTACATTCACTTGATT | + |
|
Preference number: 3 (lower is better) Translates to: ILTTLAQGFSPL*MLLSCWYIHLI Trigger: AATCAAGTGAATGTACCAACAACTCAGCAGCATGCAGAGTGGAGAAAAGCCCTGAGCCAGAGTTGTCAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR CCA 72 bp | TGGATGACGGGCACAGAGATGCTACAAAACTATGAATaGCATGCCACGTCTAGATGTCTTTGCACACTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: WMTGTEMLQNYE*HATSRCLCTLK Trigger: TTTCAGTGTGCAAAGACATCTAGACGTGGCATGCCATTCATAGTTTTGTAGCATCTCTGTGCCCGTCATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR TCA 72 bp | GAAACATTGGACAAAACCCAACTGAGAGCTGCTCTGTaGAATAATTACCCTGTATTGCAAACACCCAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: ETLDKTQLRAAL*NNYPVLQTPRP Trigger: AGGCCTGGGTGTTTGCAATACAGGGTAATTATTTCACAGAGCAGCTCTCAGTTGGGTTTTGTCCAATGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR TCA 72 bp | TGGCATGAATATTTTAAAGTGATAACCAGGAGTCCATaGTCACCTCGACTGCAGGATTCACAGTTCACTTCC | + |
|
Preference number: 3 (lower is better) Translates to: WHEYFKVITRSP*SPRLQDSQFTS Trigger: GGAAGTGAACTGTGAATCCTGCAGTCGAGGTGATCATGGACTCCTGGTTATCACTTTAAAATATTCATGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGCTTTGAGGGAAACAAAAAGTTGCCGAGGATATTCCAACGTCCACTTAAATCAATGGACACTGTCTaGAATTGTACTCAATGGACA | + |
|
Preference number: 3 (lower is better) Translates to: QSFEGNKKLPRIFQRPLKSMDTV*NCTQWT Trigger: TGTCCATTGAGTACAATTCAAGACAGTGTCCATTGA...TTTAAGTGGACGTTGGAATATCCTCGGCAACTTTTTGTTTCCCTCAAAGCTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR TCA 72 bp | AACCTAATCTCAAAGAAACATTGGACAAAACCCAACTaGGAGCTGCTCTGTGAAATAATTACCCTGTATTGC | + |
|
Preference number: 3 (lower is better) Translates to: NLISKKHWTKPN*ELLCEIITLYC Trigger: GCAATACAGGGTAATTATTTCACAGAGCAGCTCTCAGTTGGGTTTTGTCCAATGTTTCTTTGAGATTAGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR GCA 72 bp | AGGCCCACTCACTCTCAAATAAGCGAGGAAGGTCTATaGTGTCTTTATATTTTGCTACAATTTTGTGATTGT | + |
|
Preference number: 3 (lower is better) Translates to: RPTHSQISEEGL*CLYILLQFCDC Trigger: ACAATCACAAAATTGTAGCAAAATATAAAGACAGCATAGACCTTCCTCGCTTATTTGAGAGTGAGTGGGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTTTCAGCGAGGAGCTTTCTGTCCATGGCTTGGTCCTCATGTGGCTGCCCTCCCCCAGCAGCCAGGTaGTTTGTGGCGGGGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLSARSFLSMAWSSCGCPPPAAR*FVAGAC Trigger: GCAAGCCCCCGCCACAAATCACCTGGCTGCTGGGGG...AGGGCAGCCACATGAGGACCAAGCCATGGACAGAAAGCTCCTCGCTGAAAGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR TCA 90 bp | AGAGTTGTGGCTCTCTGGGGCATCATGTCCACTGCGTGCTGTAACATCCCACATCCCCCAGCAGCCAGGTaGTTTGTGGCGGGGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RVVALWGIMSTACCNIPHPPAAR*FVAGAC Trigger: GCAAGCCCCCGCCACAAATCACCTGGCTGCTGGGGG...ATGTGGGATGTTACAGCACGCAGTGGACATGATGCCCCAGAGAGCCACAACTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR TCA 90 bp | TTGAGAGTTGTGGCTCTCTGGGGCATCATGTCCACTGCGTGCTGTAACATCCCACCCCCAGCAGCCAGGTaGTTTGTGGCGGGGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LRVVALWGIMSTACCNIPPPAAR*FVAGAC Trigger: GCAAGCCCCCGCCACAAATCACCTGGCTGCTGGGGG...TGGGATGTTACAGCACGCAGTGGACATGATGCCCCAGAGAGCCACAACTCTCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTTTCAGCGAGGAGCTTTCTGTCCATGGCTTGGTCCTCATGTGGCTGCCCTGGCTGCTGGAGGGCTTaGGAGGAGAGAGAGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLSARSFLSMAWSSCGCPGCWRA*EERELC Trigger: GCAGAGCTCTCTCTCCTCCCAAGCCCTCCAGCAGCC...AGGGCAGCCACATGAGGACCAAGCCATGGACAGAAAGCTCCTCGCTGAAAGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | CAGCGAGGAGCTTTCTGTCCATGGCTTGGTCCTCATGTGGCTGCCCTGGCTCAAGTACTTGTGGGCTGCTaGAGGGCTTGGGAGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QRGAFCPWLGPHVAALAQVLVGC*RAWEER Trigger: TCTCTCCTCCCAAGCCCTCCAGCAGCCCACAAGTAC...TTGAGCCAGGGCAGCCACATGAGGACCAAGCCATGGACAGAAAGCTCCTCGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | CAGTTGAACTCAGTTGAGAGTTGTGGCTCTCTGGGGCATCATGTCCACTGCGTGGGCTGCTGGAGGGCTTaGGAGGAGAGAGAGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QLNSVESCGSLGHHVHCVGCWRA*EERELC Trigger: GCAGAGCTCTCTCTCCTCCCAAGCCCTCCAGCAGCC...CACGCAGTGGACATGATGCCCCAGAGAGCCACAACTCTCAACTGAGTTCAACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | CATGGCTTGGTCCTCATGTGGCTGCCCTGGCTCAATGGACACTGTCTTGAATTGGGCTGCTGGAGGGCTTaGGAGGAGAGAGAGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HGLVLMWLPWLNGHCLELGCWRA*EERELC Trigger: GCAGAGCTCTCTCTCCTCCCAAGCCCTCCAGCAGCC...CAATTCAAGACAGTGTCCATTGAGCCAGGGCAGCCACATGAGGACCAAGCCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR TCA 90 bp | CAGCGAGGAGCTTTCTGTCCATGGCTTGGTCCTCATGTGGCTGCCCTGGCTCAAAATGCAGTGCACGGTTaGGTTTTTGCCGTATGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: QRGAFCPWLGPHVAALAQNAVHG*VFAVCA Trigger: CGCGCATACGGCAAAAACTCAACCGTGCACTGCATT...TTGAGCCAGGGCAGCCACATGAGGACCAAGCCATGGACAGAAAGCTCCTCGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR GCA 90 bp | ACATGGAGCCTTTGCCGGAGAAGGACATCTAAGGGCAATGGGCACTGGTGGAACACTGTACTTGTGGGCTaGTGGAGGGCTTGGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TWSLCRRRTSKGNGHWWNTVLVG*WRAWEE Trigger: CTCCTCCCAAGCCCTCCAGCAGCCCACAAGTACAGT...GTTCCACCAGTGCCCATTGCCCTTAGATGTCCTTCTCCGGCAAAGGCTCCATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | CAGCGAGGAGCTTTCTGTCCATGGCTTGGTCCTCATGTGGCTGCCCTGGCTCAAGTTAGAGTGAGCGTTTaGCCTTCCTCTACCGTGACG | + |
|
Preference number: 4 (lower is better) Translates to: QRGAFCPWLGPHVAALAQVRVSV*PSSTVT Trigger: CGTCACGGTAGAGGAAGGCCAAACGCTCACTCTAAC...TTGAGCCAGGGCAGCCACATGAGGACCAAGCCATGGACAGAAAGCTCCTCGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTGCACCTGTGTGCATGTCAAAGGCTTCCACACAGAGGGGCCACACATGTGGTACTTGTGGGCTGCTaGAGGGCTTGGGAGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SVHLCACQRLPHRGATHVVLVGC*RAWEER Trigger: TCTCTCCTCCCAAGCCCTCCAGCAGCCCACAAGTAC...CACATGTGTGGCCCCTCTGTGTGGAAGCCTTTGACATGCACACAGGTGCACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTTCTGAGAGGCTGTCTTGAAAGCAGGCTGCTGGCATCTCAGGTCTCCTTGGCTGAGCACTGGCAGTaGACAAGCCAGGGTCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLLRGCLESRLLASQVSLAEHWQ*TSQGLE Trigger: CTCAAGACCCTGGCTTGTCCACTGCCAGTGCTCAGC...CAAGGAGACCTGAGATGCCAGCAGCCTGCTTTCAAGACAGCCTCTCAGAAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188848.8 |
||
| CDS-3UTR TCA 90 bp | CAGCGAGGAGCTTTCTGTCCATGGCTTGGTCCTCATGTGGCTGCCCTGGCTCAAGACAAGCCAGGGTCTTaGGTGGCATGTTCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QRGAFCPWLGPHVAALAQDKPGS*VACSFS Trigger: AGAGAAAGAACATGCCACTCAAGACCCTGGCTTGTC...TTGAGCCAGGGCAGCCACATGAGGACCAAGCCATGGACAGAAAGCTCCTCGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR TCA 90 bp | CCTCTTCTGAGAGGCTGTCTTGAAAGCAGGCTGCTGGCATCTCAGGTCTCCTTGGGAAGGACACCAGTGTaGGCAGCAGGATACCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLLRGCLESRLLASQVSLGRTPV*AAGYHS Trigger: AGAGTGGTATCCTGCTGCTCACACTGGTGTCCTTCC...CAAGGAGACCTGAGATGCCAGCAGCCTGCTTTCAAGACAGCCTCTCAGAAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR TCA 90 bp | CTGCGTGCTGTAACATCCCACATTTCTCTGTTGCCCACCAGGCCTCTTCTGAGAGCCAGTCCTGTATGCTaGGCACTGGCAGTGGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRAVTSHISLLPTRPLLRASPVC*ALAVDK Trigger: CTTGTCCACTGCCAGTGCTCAGCATACAGGACTGGC...TCTCAGAAGAGGCCTGGTGGGCAACAGAGAAATGTGGGATGTTACAGCACGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188848.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCCTTTCAGCGAGGAGCTTTCTGTCCATGGCTTGGTCCTCATGTGGCTGCCACTGTACTTGTGGGCTaGTGGAGGGCTTGGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSFQRGAFCPWLGPHVAATVLVG*WRAWEE Trigger: CTCCTCCCAAGCCCTCCAGCAGCCCACAAGTACAGT...GGCAGCCACATGAGGACCAAGCCATGGACAGAAAGCTCCTCGCTGAAAGGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTGGTCCTCATGTGGCTGCCCTGGCTCAATGGACACTGTCTTGAATTGTACACTGTACTTGTGGGCTaGTGGAGGGCTTGGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLVLMWLPWLNGHCLELYTVLVG*WRAWEE Trigger: CTCCTCCCAAGCCCTCCAGCAGCCCACAAGTACAGT...GTACAATTCAAGACAGTGTCCATTGAGCCAGGGCAGCCACATGAGGACCAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGAGGCTGTCTTGAAAGCAGGCTGCTGGCATCTCAGGTCTCCTTGGGGTACGTTAGAGTGAGCGTTTaGCCTTCCTCTACCGTGACG | + |
|
Preference number: 4 (lower is better) Translates to: LRGCLESRLLASQVSLGYVRVSV*PSSTVT Trigger: CGTCACGGTAGAGGAAGGCCAAACGCTCACTCTAAC...GTACCCCAAGGAGACCTGAGATGCCAGCAGCCTGCTTTCAAGACAGCCTCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTCAGACCAAATCATATAGTGGAGAACTTGCCACCAGCCCACCGAAGCACAGGCTGCTGGAGGGCTTaGGAGGAGAGAGAGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CVRPNHIVENLPPAHRSTGCWRA*EERELC Trigger: GCAGAGCTCTCTCTCCTCCCAAGCCCTCCAGCAGCC...TGTGCTTCGGTGGGCTGGTGGCAAGTTCTCCACTATATGATTTGGTCTGACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | CAGCGAGGAGCTTTCTGTCCATGGCTTGGTCCTCATGTGGCTGCCCTGGCTCAATGGCTGCTATTCTCCTaGGAAGATGTCTCCTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QRGAFCPWLGPHVAALAQWLLFS*EDVSSL Trigger: CAACGAGGAGACATCTTCCCAGGAGAATAGCAGCCA...TTGAGCCAGGGCAGCCACATGAGGACCAAGCCATGGACAGAAAGCTCCTCGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR TCA 90 bp | CATGGCTTGGTCCTCATGTGGCTGCCCTGGCTCAATGGACACTGTCTTGAATTGGGAAGGACACCAGTGTaGGCAGCAGGATACCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: HGLVLMWLPWLNGHCLELGRTPV*AAGYHS Trigger: AGAGTGGTATCCTGCTGCTCACACTGGTGTCCTTCC...CAATTCAAGACAGTGTCCATTGAGCCAGGGCAGCCACATGAGGACCAAGCCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR TCA 90 bp | GTTGTGGCTCTCTGGGGCATCATGTCCACTGCGTGCTGTAACATCCCACATTTCGGAAGGACACCAGTGTaGGCAGCAGGATACCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VVALWGIMSTACCNIPHFGRTPV*AAGYHS Trigger: AGAGTGGTATCCTGCTGCTCACACTGGTGTCCTTCC...GAAATGTGGGATGTTACAGCACGCAGTGGACATGATGCCCCAGAGAGCCACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR GCA 90 bp | CTGCGTGCTGTAACATCCCACATTTCTCTGTTGCCCACCAGGCCTCTTCTGAGAACCAGCTTTCTCCCGTaGAAGCCCTCGTGCTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: LRAVTSHISLLPTRPLLRTSFLP*KPSCWI Trigger: TATCCAGCACGAGGGCTTGCACGGGAGAAAGCTGGT...TCTCAGAAGAGGCCTGGTGGGCAACAGAGAAATGTGGGATGTTACAGCACGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTTCTGAGAGGCTGTCTTGAAAGCAGGCTGCTGGCATCTCAGGTCTCCTTGGAGGAGAGAGAGCTCTaGTCAGGGGCATCTGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PLLRGCLESRLLASQVSLEEREL*SGASEV Trigger: AACTTCAGATGCCCCTGAGCAGAGCTCTCTCTCCTC...CAAGGAGACCTGAGATGCCAGCAGCCTGCTTTCAAGACAGCCTCTCAGAAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTGCACCTGTGTGCATGTCAAAGGCTTCCACACAGAGGGGCCACACATGTGGTTAGAGTGAGCGTTTaGCCTTCCTCTACCGTGACG | + |
|
Preference number: 4 (lower is better) Translates to: SVHLCACQRLPHRGATHVVRVSV*PSSTVT Trigger: CGTCACGGTAGAGGAAGGCCAAACGCTCACTCTAAC...CACATGTGTGGCCCCTCTGTGTGGAAGCCTTTGACATGCACACAGGTGCACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGAGGCTGTCTTGAAAGCAGGCTGCTGGCATCTCAGGTCTCCTTGGGGTACTGGCTGCTATTCTCCTaGGAAGATGTCTCCTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LRGCLESRLLASQVSLGYWLLFS*EDVSSL Trigger: CAACGAGGAGACATCTTCCCAGGAGAATAGCAGCCA...GTACCCCAAGGAGACCTGAGATGCCAGCAGCCTGCTTTCAAGACAGCCTCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | GTTGTGGCTCTCTGGGGCATCATGTCCACTGCGTGCTGTAACATCCCACATTTCCTGTATGCTGAGCACTaGCAGTGGACAAGCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VVALWGIMSTACCNIPHFLYAEH*QWTSQG Trigger: ACCCTGGCTTGTCCACTGCCAGTGCTCAGCATACAG...GAAATGTGGGATGTTACAGCACGCAGTGGACATGATGCCCCAGAGAGCCACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188848.8 |
||
| CDS-3UTR TCA 90 bp | GTTGTGGCTCTCTGGGGCATCATGTCCACTGCGTGCTGTAACATCCCACATTTCAATGCAGTGCACGGTTaGGTTTTTGCCGTATGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: VVALWGIMSTACCNIPHFNAVHG*VFAVCA Trigger: CGCGCATACGGCAAAAACTCAACCGTGCACTGCATT...GAAATGTGGGATGTTACAGCACGCAGTGGACATGATGCCCCAGAGAGCCACAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR TCA 90 bp | GGCTTGGTCCTCATGTGGCTGCCCTGGCTCAATGGACACTGTCTTGAATTGTACAATGCAGTGCACGGTTaGGTTTTTGCCGTATGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: GLVLMWLPWLNGHCLELYNAVHG*VFAVCA Trigger: CGCGCATACGGCAAAAACTCAACCGTGCACTGCATT...GTACAATTCAAGACAGTGTCCATTGAGCCAGGGCAGCCACATGAGGACCAAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTTCTGAGAGGCTGTCTTGAAAGCAGGCTGCTGGCATCTCAGGTCTCCTTGCATTTTCAGAAAGGCTaGTTGCACCGGCACCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLLRGCLESRLLASQVSLHFQKG*LHRHPE Trigger: TTCTGGGTGCCGGTGCAAGCAGCCTTTCTGAAAATG...CAAGGAGACCTGAGATGCCAGCAGCCTGCTTTCAAGACAGCCTCTCAGAAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTGGTCCTCATGTGGCTGCCCTGGCTCAATGGACACTGTCTTGAATTGTACGAGGAGAGAGAGCTCTaGTCAGGGGCATCTGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GLVLMWLPWLNGHCLELYEEREL*SGASEV Trigger: AACTTCAGATGCCCCTGAGCAGAGCTCTCTCTCCTC...GTACAATTCAAGACAGTGTCCATTGAGCCAGGGCAGCCACATGAGGACCAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR GCA 90 bp | GTTGTGGCTCTCTGGGGCATCATGTCCACTGCGTGCTGTAACATCCCACATTTCGAGGAGAGAGAGCTCTaGTCAGGGGCATCTGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VVALWGIMSTACCNIPHFEEREL*SGASEV Trigger: AACTTCAGATGCCCCTGAGCAGAGCTCTCTCTCCTC...GAAATGTGGGATGTTACAGCACGCAGTGGACATGATGCCCCAGAGAGCCACAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | CATGGCTTGGTCCTCATGTGGCTGCCCTGGCTCAATGGACACTGTCTTGAATTGGCTTCCACGGTTGGCTaGAAAGGAGTCACTAACACG | + |
|
Preference number: 4 (lower is better) Translates to: HGLVLMWLPWLNGHCLELASTVG*KGVTNT Trigger: CGTGTTAGTGACTCCTTTCCAGCCAACCGTGGAAGC...CAATTCAAGACAGTGTCCATTGAGCCAGGGCAGCCACATGAGGACCAAGCCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCCTTTCAGCGAGGAGCTTTCTGTCCATGGCTTGGTCCTCATGTGGCTGCCGCTTCCACGGTTGGCTaGAAAGGAGTCACTAACACG | + |
|
Preference number: 4 (lower is better) Translates to: FSFQRGAFCPWLGPHVAAASTVG*KGVTNT Trigger: CGTGTTAGTGACTCCTTTCCAGCCAACCGTGGAAGC...GGCAGCCACATGAGGACCAAGCCATGGACAGAAAGCTCCTCGCTGAAAGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCTCCCACCACCTCATTCCATTCTAAATGTCCCCTGCAGTCCTCTTACTACCAGCCAGGTGATTTGTaGCGGGGGCTTGCTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TAPTTSFHSKCPLQSSYYQPGDL*RGLASL Trigger: GAGAGAAGCAAGCCCCCGCCACAAATCACCTGGCTG...GTAGTAAGAGGACTGCAGGGGACATTTAGAATGGAATGAGGTGGTGGGAGCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTTCTGAGAGGCTGTCTTGAAAGCAGGCTGCTGGCATCTCAGGTCTCCTTGCCGAGCTTCCAGTGCTaGGCACTCTTCTTTGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLLRGCLESRLLASQVSLPSFQC*ALFFVL Trigger: CAAAACAAAGAAGAGTGCCCAGCACTGGAAGCTCGG...CAAGGAGACCTGAGATGCCAGCAGCCTGCTTTCAAGACAGCCTCTCAGAAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTGCACCTGTGTGCATGTCAAAGGCTTCCACACAGAGGGGCCACACATGTGCCGAGCTTCCAGTGCTaGGCACTCTTCTTTGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVHLCACQRLPHRGATHVPSFQC*ALFFVL Trigger: CAAAACAAAGAAGAGTGCCCAGCACTGGAAGCTCGG...CACATGTGTGGCCCCTCTGTGTGGAAGCCTTTGACATGCACACAGGTGCACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR CAA 72 bp | GATGAAGTGAGAAGCCAGCTGGGGCCTTCAGGACAGTaGGGACAACAGGAAAAGCTTGGTTGGTGTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DEVRSQLGPSGQ*GQQEKLGWCLP Trigger: AGGCAAACACCAACCAAGCTTTTCCTGTTGTCCCAACTGTCCTGAAGGCCCCAGCTGGCTTCTCACTTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR TCA 90 bp | GGCTTGGTCCTCATGTGGCTGCCCTGGCTCAATGGACACTGTCTTGAATTGTACGACAAGCCAGGGTCTTaGGTGGCATGTTCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLVLMWLPWLNGHCLELYDKPGS*VACSFS Trigger: AGAGAAAGAACATGCCACTCAAGACCCTGGCTTGTC...GTACAATTCAAGACAGTGTCCATTGAGCCAGGGCAGCCACATGAGGACCAAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR GCA 90 bp | CATGGCTTGGTCCTCATGTGGCTGCCCTGGCTCAATGGACACTGTCTTGAATTGCATTTTCAGAAAGGCTaGTTGCACCGGCACCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HGLVLMWLPWLNGHCLELHFQKG*LHRHPE Trigger: TTCTGGGTGCCGGTGCAAGCAGCCTTTCTGAAAATG...CAATTCAAGACAGTGTCCATTGAGCCAGGGCAGCCACATGAGGACCAAGCCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR GCA 90 bp | CTGCGTGCTGTAACATCCCACATTTCTCTGTTGCCCACCAGGCCTCTTCTGAGACATTTTCAGAAAGGCTaGTTGCACCGGCACCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LRAVTSHISLLPTRPLLRHFQKG*LHRHPE Trigger: TTCTGGGTGCCGGTGCAAGCAGCCTTTCTGAAAATG...TCTCAGAAGAGGCCTGGTGGGCAACAGAGAAATGTGGGATGTTACAGCACGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR GCA 90 bp | TCAGGTTGGCTCATGGTTAGTCAGGAAGCCTCTTGTCAGTTGAACTCAGTTGAGCCGTGCAAGCCCTCGTaGTGGATAATGCAGTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: SGWLMVSQEASCQLNSVEPCKPS*WIMQCT Trigger: CGTGCACTGCATTATCCAGCACGAGGGCTTGCACGG...CTCAACTGAGTTCAACTGACAAGAGGCTTCCTGACTAACCATGAGCCAACCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTCAGACCAAATCATATAGTGGAGAACTTGCCACCAGCCCACCGAAGCACAACCAGCTTTCTCCCGTaGAAGCCCTCGTGCTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: CVRPNHIVENLPPAHRSTTSFLP*KPSCWI Trigger: TATCCAGCACGAGGGCTTGCACGGGAGAAAGCTGGT...TGTGCTTCGGTGGGCTGGTGGCAAGTTCTCCACTATATGATTTGGTCTGACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | GTCCATGGCTTGGTCCTCATGTGGCTGCCCTGGCTCAATGGACACTGTCTTGAAGCTTGCTTCTCTCTGTaGAACATTTCAGCACAACCG | + |
|
Preference number: 4 (lower is better) Translates to: VHGLVLMWLPWLNGHCLEACFSL*NISAQP Trigger: CGGTTGTGCTGAAATGTTCCACAGAGAGAAGCAAGC...TTCAAGACAGTGTCCATTGAGCCAGGGCAGCCACATGAGGACCAAGCCATGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | GTCCATGGCTTGGTCCTCATGTGGCTGCCCTGGCTCAATGGACACTGTCTTGAAAGCCAGGGTCTTGAGTaGCATGTTCTTTCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VHGLVLMWLPWLNGHCLESQGLE*HVLSLP Trigger: AGGAAGAGAAAGAACATGCCACTCAAGACCCTGGCT...TTCAAGACAGTGTCCATTGAGCCAGGGCAGCCACATGAGGACCAAGCCATGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | TTGAACTCAGTTGAGAGTTGTGGCTCTCTGGGGCATCATGTCCACTGCGTGCTGTGGCTGCTATTCTCCTaGGAAGATGTCTCCTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LNSVESCGSLGHHVHCVLWLLFS*EDVSSL Trigger: CAACGAGGAGACATCTTCCCAGGAGAATAGCAGCCA...CAGCACGCAGTGGACATGATGCCCCAGAGAGCCACAACTCTCAACTGAGTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR TCA 90 bp | CAGCGAGGAGCTTTCTGTCCATGGCTTGGTCCTCATGTGGCTGCCCTGGCTCAACTTCAAATTCATGGTTaGGTTCACCATAGATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QRGAFCPWLGPHVAALAQLQIHG*VHHRSP Trigger: TGGAGATCTATGGTGAACTCAACCATGAATTTGAAG...TTGAGCCAGGGCAGCCACATGAGGACCAAGCCATGGACAGAAAGCTCCTCGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR GCA 90 bp | GTTGTGGCTCTCTGGGGCATCATGTCCACTGCGTGCTGTAACATCCCACATTTCTGCTGGATAATGCAGTaGACGGTTGAGTTTTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VVALWGIMSTACCNIPHFCWIMQ*TVEFLP Trigger: CGGCAAAAACTCAACCGTGCACTGCATTATCCAGCA...GAAATGTGGGATGTTACAGCACGCAGTGGACATGATGCCCCAGAGAGCCACAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTCAGACCAAATCATATAGTGGAGAACTTGCCACCAGCCCACCGAAGCACAGAGGAGAGAGAGCTCTaGTCAGGGGCATCTGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: CVRPNHIVENLPPAHRSTEEREL*SGASEV Trigger: AACTTCAGATGCCCCTGAGCAGAGCTCTCTCTCCTC...TGTGCTTCGGTGGGCTGGTGGCAAGTTCTCCACTATATGATTTGGTCTGACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR GCA 90 bp | TGTCTGTGCACCTGTGTGCATGTCAAAGGCTTCCACACAGAGGGGCCACACATGCTTCCATACCACGTGTaGTTTACGCAGCTTCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: CLCTCVHVKGFHTEGPHMLPYHV*FTQLHD Trigger: ATCATGAAGCTGCGTAAAGCACACGTGGTATGGAAG...CATGTGTGGCCCCTCTGTGTGGAAGCCTTTGACATGCACACAGGTGCACAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | GCTGTCTTGAAAGCAGGCTGCTGGCATCTCAGGTCTCCTTGGGGTACTTCTCATGCTTGCTTCTCTCTGTaGAACATTTCAGCACAACCG | + |
|
Preference number: 4 (lower is better) Translates to: AVLKAGCWHLRSPWGTSHACFSL*NISAQP Trigger: CGGTTGTGCTGAAATGTTCCACAGAGAGAAGCAAGC...ATGAGAAGTACCCCAAGGAGACCTGAGATGCCAGCAGCCTGCTTTCAAGACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | GGCTTTTCTCCACTCTGCATGCTGCTGAGTTGTTGGTACATTCACTTGATTCCTCAGCCAGGTGATTTGTaGCGGGGGCTTGCTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GFSPLCMLLSCWYIHLIPQPGDL*RGLASL Trigger: GAGAGAAGCAAGCCCCCGCCACAAATCACCTGGCTG...AGGAATCAAGTGAATGTACCAACAACTCAGCAGCATGCAGAGTGGAGAAAAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| 3UTR CAA 72 bp | GCTGTTCCCTTCGAGGTCAGCTGCTCACTGGTCATTTaGACCCTGATCCAAAACGACTTAGCAGAGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AVPFEVSCSLVI*TLIQNDLAEFS Trigger: GGAGAACTCTGCTAAGTCGTTTTGGATCAGGGTCAAAATGACCAGTGAGCAGCTGACCTCGAAGGGAACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR CAA 72 bp | GGTTGGCTCATGGTTAGTCAGGAAGCCTCTTGTCAGTaGAACTCAGTTGAGAGTTGTGGCTCTCTGGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GWLMVSQEASCQ*NSVESCGSLGH Trigger: ATGCCCCAGAGAGCCACAACTCTCAACTGAGTTCAACTGACAAGAGGCTTCCTGACTAACCATGAGCCAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR CAA 72 bp | CAGTCCTCTTACTACAGCAATAGAGGGGCCATGGCATaGAGGCCAGGTAGTCTTGGATTGCTGTACAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QSSYYSNRGAMA*RPGSLGLLYSV Trigger: GACACTGTACAGCAATCCAAGACTACCTGGCCTCAATGCCATGGCCCCTCTATTGCTGTAGTAAGAGGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR TCA 90 bp | TTGAACTCAGTTGAGAGTTGTGGCTCTCTGGGGCATCATGTCCACTGCGTGCTGGGAATTTTCCATCATTaGGACTGTACTTGTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LNSVESCGSLGHHVHCVLGIFHH*DCTCGL Trigger: CAGCCCACAAGTACAGTCTCAATGATGGAAAATTCC...CAGCACGCAGTGGACATGATGCCCCAGAGAGCCACAACTCTCAACTGAGTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR TCA 90 bp | ATGTGGCTGCCCTGGCTCAATGGACACTGTCTTGAATTGTACTCAATGGACATTGGAAGGACACCAGTGTaGGCAGCAGGATACCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: MWLPWLNGHCLELYSMDIGRTPV*AAGYHS Trigger: AGAGTGGTATCCTGCTGCTCACACTGGTGTCCTTCC...AATGTCCATTGAGTACAATTCAAGACAGTGTCCATTGAGCCAGGGCAGCCACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR GCA 90 bp | CATGGCTTGGTCCTCATGTGGCTGCCCTGGCTCAATGGACACTGTCTTGAATTGCTTCCATACCACGTGTaGTTTACGCAGCTTCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: HGLVLMWLPWLNGHCLELLPYHV*FTQLHD Trigger: ATCATGAAGCTGCGTAAAGCACACGTGGTATGGAAG...CAATTCAAGACAGTGTCCATTGAGCCAGGGCAGCCACATGAGGACCAAGCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR GCA 90 bp | GCTGTCTTGAAAGCAGGCTGCTGGCATCTCAGGTCTCCTTGGGGTACTTCTCATCTTCCATACCACGTGTaGTTTACGCAGCTTCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: AVLKAGCWHLRSPWGTSHLPYHV*FTQLHD Trigger: ATCATGAAGCTGCGTAAAGCACACGTGGTATGGAAG...ATGAGAAGTACCCCAAGGAGACCTGAGATGCCAGCAGCCTGCTTTCAAGACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | AGTCAGGAAGCCTCTTGTCAGTTGAACTCAGTTGAGAGTTGTGGCTCTCTGGGGGCTTGCTTCTCTCTGTaGAACATTTCAGCACAACCG | + |
|
Preference number: 4 (lower is better) Translates to: SQEASCQLNSVESCGSLGACFSL*NISAQP Trigger: CGGTTGTGCTGAAATGTTCCACAGAGAGAAGCAAGC...CCCCAGAGAGCCACAACTCTCAACTGAGTTCAACTGACAAGAGGCTTCCTGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | CAGTTGAACTCAGTTGAGAGTTGTGGCTCTCTGGGGCATCATGTCCACTGCGTGTCCAAATCTTCAAACTaGAAGGGGGCAACCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QLNSVESCGSLGHHVHCVSKSSN*KGATSF Trigger: AAAGCTGGTTGCCCCCTTCCAGTTTGAAGATTTGGA...CACGCAGTGGACATGATGCCCCAGAGAGCCACAACTCTCAACTGAGTTCAACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034519.13 |
||
| CDS-3UTR CCA 90 bp | ATTATCATAGGAGGGATAGGACCAGGAAGAGCTGGGGTCTACAATAACACATTCGTACTTGTGGGCTGCTaGAGGGCTTGGGAGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IIIGGIGPGRAGVYNNTFVLVGC*RAWEER Trigger: TCTCTCCTCCCAAGCCCTCCAGCAGCCCACAAGTAC...GAATGTGTTATTGTAGACCCCAGCTCTTCCTGGTCCTATCCCTCCTATGATAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | AGTCAGGAAGCCTCTTGTCAGTTGAACTCAGTTGAGAGTTGTGGCTCTCTGGGGAGCCAGGGTCTTGAGTaGCATGTTCTTTCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SQEASCQLNSVESCGSLGSQGLE*HVLSLP Trigger: AGGAAGAGAAAGAACATGCCACTCAAGACCCTGGCT...CCCCAGAGAGCCACAACTCTCAACTGAGTTCAACTGACAAGAGGCTTCCTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | TTGTGGCTCTCTGGGGCATCATGTCCACTGCGTGCTGTAACATCCCACATTTCTAGCCAGGGTCTTGAGTaGCATGTTCTTTCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LWLSGASCPLRAVTSHISSQGLE*HVLSLP Trigger: AGGAAGAGAAAGAACATGCCACTCAAGACCCTGGCT...AGAAATGTGGGATGTTACAGCACGCAGTGGACATGATGCCCCAGAGAGCCACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR GCA 90 bp | AACGACTTAGCAGAGTTCTCCAGCTCTGAGGTAGTGTCAGTCATAATAGGTTCTACCAGCTTTCTCCCGTaGAAGCCCTCGTGCTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: NDLAEFSSSEVVSVIIGSTSFLP*KPSCWI Trigger: TATCCAGCACGAGGGCTTGCACGGGAGAAAGCTGGT...AGAACCTATTATGACTGACACTACCTCAGAGCTGGAGAACTCTGCTAAGTCGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR GCA 90 bp | ACGGTTTGCTTCTGTCCCTACTTTTACCATGGTGTAATTAGGATAAAAGTGGCCACTGTACTTGTGGGCTaGTGGAGGGCTTGGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TVCFCPYFYHGVIRIKVATVLVG*WRAWEE Trigger: CTCCTCCCAAGCCCTCCAGCAGCCCACAAGTACAGT...GGCCACTTTTATCCTAATTACACCATGGTAAAAGTAGGGACAGAAGCAAACCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGAGGCTGTCTTGAAAGCAGGCTGCTGGCATCTCAGGTCTCCTTGGGGTACATGTCTCCTCGTTGTTaGATCTTGATCTGTAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LRGCLESRLLASQVSLGYMSPRC*ILICNF Trigger: AAAGTTACAGATCAAGATCCAACAACGAGGAGACAT...GTACCCCAAGGAGACCTGAGATGCCAGCAGCCTGCTTTCAAGACAGCCTCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGTTGGCTCATGGTTAGTCAGGAAGCCTCTTGTCAGTTGAACTCAGTTGAGCCGAGCTTCCAGTGCTaGGCACTCTTCTTTGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SGWLMVSQEASCQLNSVEPSFQC*ALFFVL Trigger: CAAAACAAAGAAGAGTGCCCAGCACTGGAAGCTCGG...CTCAACTGAGTTCAACTGACAAGAGGCTTCCTGACTAACCATGAGCCAACCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR CAA 72 bp | GTAGGCTGTGTCAGACCAAATCATATAGTGGAGAACTaGCCACCAGCCCACCGAAGCACAAAGGTTAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VGCVRPNHIVEN*PPAHRSTKVRY Trigger: ATACCTAACCTTTGTGCTTCGGTGGGCTGGTGGCAAGTTCTCCACTATATGATTTGGTCTGACACAGCCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR CAA 72 bp | CCACTCTGCATGCTGCTGAGTTGTTGGTACATTCACTaGATTCCTGATAATGGGCCTGGAGAAATTGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLCMLLSCWYIH*IPDNGPGEIGG Trigger: TCCCCCAATTTCTCCAGGCCCATTATCAGGAATCAAGTGAATGTACCAACAACTCAGCAGCATGCAGAGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR TCA 90 bp | GGCTTGGTCCTCATGTGGCTGCCCTGGCTCAATGGACACTGTCTTGAATTGTACCTTCAAATTCATGGTTaGGTTCACCATAGATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLVLMWLPWLNGHCLELYLQIHG*VHHRSP Trigger: TGGAGATCTATGGTGAACTCAACCATGAATTTGAAG...GTACAATTCAAGACAGTGTCCATTGAGCCAGGGCAGCCACATGAGGACCAAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR TCA 90 bp | GCTGTCTTGAAAGCAGGCTGCTGGCATCTCAGGTCTCCTTGGGGTACTTCTCATGCATCTGAAGTTTCTTaGTCCAAATCTTCAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: AVLKAGCWHLRSPWGTSHASEVS*SKSSNW Trigger: CCAGTTTGAAGATTTGGATCAAGAAACTTCAGATGC...ATGAGAAGTACCCCAAGGAGACCTGAGATGCCAGCAGCCTGCTTTCAAGACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034519.13 |
||
| CDS-3UTR TCA 90 bp | ACAGCTCCCACCACCTCATTCCATTCTAAATGTCCCCTGCAGTCCTCTTACTACGGAATTTTCCATCATTaGGACTGTACTTGTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TAPTTSFHSKCPLQSSYYGIFHH*DCTCGL Trigger: CAGCCCACAAGTACAGTCTCAATGATGGAAAATTCC...GTAGTAAGAGGACTGCAGGGGACATTTAGAATGGAATGAGGTGGTGGGAGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR TCA 90 bp | TTGAGAGTTGTGGCTCTCTGGGGCATCATGTCCACTGCGTGCTGTAACATCCCATTCATGATGAAGAGCTaGACGATGATGAAAAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LRVVALWGIMSTACCNIPFMMKS*TMMKRM Trigger: CATCCTTTTCATCATCGTTCAGCTCTTCATCATGAA...TGGGATGTTACAGCACGCAGTGGACATGATGCCCCAGAGAGCCACAACTCTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR TCA 90 bp | CAGTTGAACTCAGTTGAGAGTTGTGGCTCTCTGGGGCATCATGTCCACTGCGTGTTCATGATGAAGAGCTaGACGATGATGAAAAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: QLNSVESCGSLGHHVHCVFMMKS*TMMKRM Trigger: CATCCTTTTCATCATCGTTCAGCTCTTCATCATGAA...CACGCAGTGGACATGATGCCCCAGAGAGCCACAACTCTCAACTGAGTTCAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTGACCAGAAGGAAAGATTTTAAACCAATTCAAACAGTTCCACTCCAGCCCCCGTGCAAGCCCTCGTaGTGGATAATGCAGTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: FLTRRKDFKPIQTVPLQPPCKPS*WIMQCT Trigger: CGTGCACTGCATTATCCAGCACGAGGGCTTGCACGG...GGGCTGGAGTGGAACTGTTTGAATTGGTTTAAAATCTTTCCTTCTGGTCAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR GCA 90 bp | TGCCCTGGCTCAATGGACACTGTCTTGAATTGTACTCAATGGACATTCTATTTTCCGTGCAAGCCCTCGTaGTGGATAATGCAGTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: CPGSMDTVLNCTQWTFYFPCKPS*WIMQCT Trigger: CGTGCACTGCATTATCCAGCACGAGGGCTTGCACGG...AAAATAGAATGTCCATTGAGTACAATTCAAGACAGTGTCCATTGAGCCAGGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTCAGACCAAATCATATAGTGGAGAACTTGCCACCAGCCCACCGAAGCACACTTCCATACCACGTGTaGTTTACGCAGCTTCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: CVRPNHIVENLPPAHRSTLPYHV*FTQLHD Trigger: ATCATGAAGCTGCGTAAAGCACACGTGGTATGGAAG...TGTGCTTCGGTGGGCTGGTGGCAAGTTCTCCACTATATGATTTGGTCTGACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | GTCCATGGCTTGGTCCTCATGTGGCTGCCCTGGCTCAATGGACACTGTCTTGAAGAAGAAGCTGGTATTTaGAGCTTTTTAAAGCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VHGLVLMWLPWLNGHCLEEEAGI*SFLKQD Trigger: ATCCTGCTTTAAAAAGCTCCAAATACCAGCTTCTTC...TTCAAGACAGTGTCCATTGAGCCAGGGCAGCCACATGAGGACCAAGCCATGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTGACCAGAAGGAAAGATTTTAAACCAATTCAAACAGTTCCACTCCAGCCCCAGCCAGGTGATTTGTaGCGGGGGCTTGCTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLTRRKDFKPIQTVPLQPQPGDL*RGLASL Trigger: GAGAGAAGCAAGCCCCCGCCACAAATCACCTGGCTG...GGGCTGGAGTGGAACTGTTTGAATTGGTTTAAAATCTTTCCTTCTGGTCAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
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| CDS-3UTR CCA 90 bp | TGCCCTGGCTCAATGGACACTGTCTTGAATTGTACTCAATGGACATTCTATTTTGTACTTGTGGGCTGCTaGAGGGCTTGGGAGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CPGSMDTVLNCTQWTFYFVLVGC*RAWEER Trigger: TCTCTCCTCCCAAGCCCTCCAGCAGCCCACAAGTAC...AAAATAGAATGTCCATTGAGTACAATTCAAGACAGTGTCCATTGAGCCAGGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | TGTCTGTGCACCTGTGTGCATGTCAAAGGCTTCCACACAGAGGGGCCACACATGCAGTCTCTGGTATACTaGAATTTTCCATCATTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CLCTCVHVKGFHTEGPHMQSLVY*NFPSLR Trigger: TCTCAATGATGGAAAATTCCAGTATACCAGAGACTG...CATGTGTGGCCCCTCTGTGTGGAAGCCTTTGACATGCACACAGGTGCACAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| CDS-3UTR TCA 90 bp | CAAAAGCCATGGCAACTATCACAAATCCTGGATCCTAAATGCCAGAGTCCATTGGACAAGCCAGGGTCTTaGGTGGCATGTTCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QKPWQLSQILDPKCQSPLDKPGS*VACSFS Trigger: AGAGAAAGAACATGCCACTCAAGACCCTGGCTTGTC...CAATGGACTCTGGCATTTAGGATCCAGGATTTGTGATAGTTGCCATGGCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| CDS-3UTR GCA 90 bp | GGCTTTTCTCCACTCTGCATGCTGCTGAGTTGTTGGTACATTCACTTGATTCCTTGCTGGATAATGCAGTaGACGGTTGAGTTTTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GFSPLCMLLSCWYIHLIPCWIMQ*TVEFLP Trigger: CGGCAAAAACTCAACCGTGCACTGCATTATCCAGCA...AGGAATCAAGTGAATGTACCAACAACTCAGCAGCATGCAGAGTGGAGAAAAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000180384.3 ENSMUST00000188848.8 |
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| CDS-3UTR CCA 90 bp | GGCTTGGTCCTCATGTGGCTGCCCTGGCTCAATGGACACTGTCTTGAATTGTACGAAGAAGCTGGTATTTaGAGCTTTTTAAAGCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GLVLMWLPWLNGHCLELYEEAGI*SFLKQD Trigger: ATCCTGCTTTAAAAAGCTCCAAATACCAGCTTCTTC...GTACAATTCAAGACAGTGTCCATTGAGCCAGGGCAGCCACATGAGGACCAAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
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| CDS-3UTR CCA 90 bp | TTTTCCTTTCAGCGAGGAGCTTTCTGTCCATGGCTTGGTCCTCATGTGGCTGCCCAGTCTCTGGTATACTaGAATTTTCCATCATTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSFQRGAFCPWLGPHVAAQSLVY*NFPSLR Trigger: TCTCAATGATGGAAAATTCCAGTATACCAGAGACTG...GGCAGCCACATGAGGACCAAGCCATGGACAGAAAGCTCCTCGCTGAAAGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | CAGTTGAACTCAGTTGAGAGTTGTGGCTCTCTGGGGCATCATGTCCACTGCGTGCAGTCTCTGGTATACTaGAATTTTCCATCATTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QLNSVESCGSLGHHVHCVQSLVY*NFPSLR Trigger: TCTCAATGATGGAAAATTCCAGTATACCAGAGACTG...CACGCAGTGGACATGATGCCCCAGAGAGCCACAACTCTCAACTGAGTTCAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | GTTGTGGCTCTCTGGGGCATCATGTCCACTGCGTGCTGTAACATCCCACATTTCCAGTCTCTGGTATACTaGAATTTTCCATCATTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VVALWGIMSTACCNIPHFQSLVY*NFPSLR Trigger: TCTCAATGATGGAAAATTCCAGTATACCAGAGACTG...GAAATGTGGGATGTTACAGCACGCAGTGGACATGATGCCCCAGAGAGCCACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | CATGGCTTGGTCCTCATGTGGCTGCCCTGGCTCAATGGACACTGTCTTGAATTGATGTCTCCTCGTTGTTaGATCTTGATCTGTAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: HGLVLMWLPWLNGHCLELMSPRC*ILICNF Trigger: AAAGTTACAGATCAAGATCCAACAACGAGGAGACAT...CAATTCAAGACAGTGTCCATTGAGCCAGGGCAGCCACATGAGGACCAAGCCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR CAA 72 bp | CTATCACAAATCCTGGATCCTAAATGCCAGAGTCCATaGCAGACTCTCTTCGAGACTTGTCATCTCCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LSQILDPKCQSP*QTLFETCHLPT Trigger: TGTGGGGAGATGACAAGTCTCGAAGAGAGTCTGCAATGGACTCTGGCATTTAGGATCCAGGATTTGTGATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR TCA 90 bp | ATGTGGCTGCCCTGGCTCAATGGACACTGTCTTGAATTGTACTCAATGGACATTGGAATTTTCCATCATTaGGACTGTACTTGTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MWLPWLNGHCLELYSMDIGIFHH*DCTCGL Trigger: CAGCCCACAAGTACAGTCTCAATGATGGAAAATTCC...AATGTCCATTGAGTACAATTCAAGACAGTGTCCATTGAGCCAGGGCAGCCACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR TCA 90 bp | GACTCTTTAGAAAATACTGATTCCAAACGCTTCCCTGAATCTTCTGACACCAGCGACAAGCCAGGGTCTTaGGTGGCATGTTCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: DSLENTDSKRFPESSDTSDKPGS*VACSFS Trigger: AGAGAAAGAACATGCCACTCAAGACCCTGGCTTGTC...GCTGGTGTCAGAAGATTCAGGGAAGCGTTTGGAATCAGTATTTTCTAAAGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | TTGTGGCTCTCTGGGGCATCATGTCCACTGCGTGCTGTAACATCCCACATTTCTATGTCTCCTCGTTGTTaGATCTTGATCTGTAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LWLSGASCPLRAVTSHISMSPRC*ILICNF Trigger: AAAGTTACAGATCAAGATCCAACAACGAGGAGACAT...AGAAATGTGGGATGTTACAGCACGCAGTGGACATGATGCCCCAGAGAGCCACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | GACTCTTTAGAAAATACTGATTCCAAACGCTTCCCTGAATCTTCTGACACCAGCCCGAGCTTCCAGTGCTaGGCACTCTTCTTTGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: DSLENTDSKRFPESSDTSPSFQC*ALFFVL Trigger: CAAAACAAAGAAGAGTGCCCAGCACTGGAAGCTCGG...GCTGGTGTCAGAAGATTCAGGGAAGCGTTTGGAATCAGTATTTTCTAAAGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | GGCTTTTCTCCACTCTGCATGCTGCTGAGTTGTTGGTACATTCACTTGATTCCTACCAAATCTTCAAACTaGAAGGGGGCAACCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GFSPLCMLLSCWYIHLIPTKSSN*KGATSF Trigger: AAAGCTGGTTGCCCCCTTCCAGTTTGAAGATTTGGT...AGGAATCAAGTGAATGTACCAACAACTCAGCAGCATGCAGAGTGGAGAAAAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR TCA 90 bp | AACGACTTAGCAGAGTTCTCCAGCTCTGAGGTAGTGTCAGTCATAATAGGTTCTGGAATTTTCCATCATTaGGACTGTACTTGTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NDLAEFSSSEVVSVIIGSGIFHH*DCTCGL Trigger: CAGCCCACAAGTACAGTCTCAATGATGGAAAATTCC...AGAACCTATTATGACTGACACTACCTCAGAGCTGGAGAACTCTGCTAAGTCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | GACTCTTTAGAAAATACTGATTCCAAACGCTTCCCTGAATCTTCTGACACCAGCAGCCAGGGTCTTGAGTaGCATGTTCTTTCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DSLENTDSKRFPESSDTSSQGLE*HVLSLP Trigger: AGGAAGAGAAAGAACATGCCACTCAAGACCCTGGCT...GCTGGTGTCAGAAGATTCAGGGAAGCGTTTGGAATCAGTATTTTCTAAAGAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR CAA 72 bp | CAACAGGCTTCCTTGAGAGCCCAGGACAAGTGTTACTaGAACCTAATCTCAAAGAAACATTGGACAAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: QQASLRAQDKCY*NLISKKHWTKP Trigger: GGGTTTTGTCCAATGTTTCTTTGAGATTAGGTTCAAGTAACACTTGTCCTGGGCTCTCAAGGAAGCCTGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR TCA 90 bp | GGCTTTTCTCCACTCTGCATGCTGCTGAGTTGTTGGTACATTCACTTGATTCCTTTCATGATGAAGAGCTaGACGATGATGAAAAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: GFSPLCMLLSCWYIHLIPFMMKS*TMMKRM Trigger: CATCCTTTTCATCATCGTTCAGCTCTTCATCATGAA...AGGAATCAAGTGAATGTACCAACAACTCAGCAGCATGCAGAGTGGAGAAAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR TCA 90 bp | ATTATCATAGGAGGGATAGGACCAGGAAGAGCTGGGGTCTACAATAACACATTCTTCATGATGAAGAGCTaGACGATGATGAAAAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: IIIGGIGPGRAGVYNNTFFMMKS*TMMKRM Trigger: CATCCTTTTCATCATCGTTCAGCTCTTCATCATGAA...GAATGTGTTATTGTAGACCCCAGCTCTTCCTGGTCCTATCCCTCCTATGATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CCA 90 bp | TGCCCTGGCTCAATGGACACTGTCTTGAATTGTACTCAATGGACATTCTATTTTACCAAATCTTCAAACTaGAAGGGGGCAACCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CPGSMDTVLNCTQWTFYFTKSSN*KGATSF Trigger: AAAGCTGGTTGCCCCCTTCCAGTTTGAAGATTTGGT...AAAATAGAATGTCCATTGAGTACAATTCAAGACAGTGTCCATTGAGCCAGGGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| 3UTR CAA 72 bp | AAGATAAATGTATGGTCCTATCCAGTACCTGGCTCCTaGTCATGTAGGCTGTGTCAGACCAAATCATATAGT | + |
|
Preference number: 4 (lower is better) Translates to: KINVWSYPVPGS*SCRLCQTKSYS Trigger: ACTATATGATTTGGTCTGACACAGCCTACATGACAAGGAGCCAGGTACTGGATAGGACCATACATTTATCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR GCA 90 bp | ACGGTTTGCTTCTGTCCCTACTTTTACCATGGTGTAATTAGGATAAAAGTGGCCGGAAAAACAAAATTCTaGTACCACCGAGATGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TVCFCPYFYHGVIRIKVAGKTKF*YHRDEL Trigger: AAGCTCATCTCGGTGGTAGCAGAATTTTGTTTTTCC...GGCCACTTTTATCCTAATTACACCATGGTAAAAGTAGGGACAGAAGCAAACCGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000180872.9 |
||
| CDS-3UTR CCA 90 bp | ACGGTTTGCTTCTGTCCCTACTTTTACCATGGTGTAATTAGGATAAAAGTGGCCATGTCTCCTCGTTGTTaGATCTTGATCTGTAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: TVCFCPYFYHGVIRIKVAMSPRC*ILICNF Trigger: AAAGTTACAGATCAAGATCCAACAACGAGGAGACAT...GGCCACTTTTATCCTAATTACACCATGGTAAAAGTAGGGACAGAAGCAAACCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR CAA 72 bp | GGTCTCCTTGGGGTACTTCTCATGCTTAAGTTCTTCTaGACCAGAAGGAAAGATTTTAAACCAATTCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: GLLGVLLMLKFF*TRRKDFKPIQT Trigger: TGTTTGAATTGGTTTAAAATCTTTCCTTCTGGTCAAGAAGAACTTAAGCATGAGAAGTACCCCAAGGAGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| 3UTR CAA 72 bp | AATAATACACAAGAAAGTAAAACTCAACAGGCTTCCTaGAGAGCCCAGGACAAGTGTTACTTGAACCTAATC | + |
|
Preference number: 4 (lower is better) Translates to: NNTQESKTQQAS*RAQDKCYLNLI Trigger: GATTAGGTTCAAGTAACACTTGTCCTGGGCTCTCAAGGAAGCCTGTTGAGTTTTACTTTCTTGTGTATTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS CCA 90 bp | AACTGGAAGGGGGCAACCAGCTTTCTCCCGTGCAAGCCCTCGTGCTaGATAATGCAGTGCACGGTTGAGTTTTTGCCGTATGCGCGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: NWKGATSFLPCKPSC*IMQCTVEFLPYARA Trigger: CGCCCGCGCATACGGCAAAAACTCAACCGTGCACTGCATTATCCAGCACGAGGGCTTGCACGGGAGAAAGCTGGTTGCCCCCTTCCAGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS GCA 90 bp | CGTTTGGCCTTCCTCTACCGTGACGGTCTCCATTTTCAGAAAGGCTaGTTGCACCGGCACCCAGAACAGCAAACTGAGGGCTCCCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: RLAFLYRDGLHFQKG*LHRHPEQQTEGSPP Trigger: TGGTGGGGAGCCCTCAGTTTGCTGTTCTGGGTGCCGGTGCAAGCAGCCTTTCTGAAAATGGAGACCGTCACGGTAGAGGAAGGCCAAACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS GCA 90 bp | GCAACCAGCTTTCTCCCGTGCAAGCCCTCGTGCTGGATAATGCAGTaGACGGTTGAGTTTTTGCCGTATGCGCGGGCGATGAGCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ATSFLPCKPSCWIMQ*TVEFLPYARAMSML Trigger: CAGCATGCTCATCGCCCGCGCATACGGCAAAAACTCAACCGTGCACTGCATTATCCAGCACGAGGGCTTGCACGGGAGAAAGCTGGTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS TCA 90 bp | CTTTCTCCCGTGCAAGCCCTCGTGCTGGATAATGCAGTGCACGGTTaGGTTTTTGCCGTATGCGCGGGCGATGAGCATGCTGCTGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSPVQALVLDNAVHG*VFAVCAGDEHAAGV Trigger: AACACCAGCAGCATGCTCATCGCCCGCGCATACGGCAAAAACTCAACCGTGCACTGCATTATCCAGCACGAGGGCTTGCACGGGAGAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS GCA 90 bp | TCAAACTGGAAGGGGGCAACCAGCTTTCTCCCGTGCAAGCCCTCGTaGTGGATAATGCAGTGCACGGTTGAGTTTTTGCCGTATGCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SNWKGATSFLPCKPS*WIMQCTVEFLPYAR Trigger: CCGCGCATACGGCAAAAACTCAACCGTGCACTGCATTATCCAGCACGAGGGCTTGCACGGGAGAAAGCTGGTTGCCCCCTTCCAGTTTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS CCA 90 bp | ATACTCTCCGGGACACGGCTGTGCTTGCCTCCGAGCTTCCAGTGCTaGGCACTCTTCTTTGTTTTGGCTCCCGAGTATAACCGCGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: ILSGTRLCLPPSFQC*ALFFVLAPEYNRVM Trigger: CATCACGCGGTTATACTCGGGAGCCAAAACAAAGAAGAGTGCCCAGCACTGGAAGCTCGGAGGCAAGCACAGCCGTGTCCCGGAGAGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CAA 90 bp | ACAGCTCCCACCACCTCATTCCATTCTAAATGTCCCCTGCAGTCCTCTTACTACGGGCTGCTGGAGGGCTaGGGAGGAGAGAGAGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TAPTTSFHSKCPLQSSYYGLLEG*GGERAL Trigger: CAGAGCTCTCTCTCCTCCCAAGCCCTCCAGCAGCCC...GTAGTAAGAGGACTGCAGGGGACATTTAGAATGGAATGAGGTGGTGGGAGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS CCA 90 bp | GCAGGATACCACTCTTCCTCCGGGCCAGTCCTGTATGCTGAGCACTaGCTTCAGTGGACAAGCCAGGGTCTTGAGTGGCATGTTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AGYHSSSGPVLYAEH*LQWTSQGLEWHVLS Trigger: AGAAAGAACATGCCACTCAAGACCCTGGCTTGTCCACTGAAGCCAGTGCTCAGCATACAGGACTGGCCCGGAGGAAGAGTGGTATCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 |
||
| CDS CCA 90 bp | TTCACCATAGATCTCCAGACCTTCCCCCAGCAGCCAGGTGATTTGTaGCGGGGGCTTGCTTCTCTCTGTGGAACATTTCAGCACAACCGA | + |
|
Preference number: 5 (lower is better) Translates to: FTIDLQTFPQQPGDL*RGLASLCGTFQHNR Trigger: TCGGTTGTGCTGAAATGTTCCACAGAGAGAAGCAAGCCCCCGCCACAAATCACCTGGCTGCTGGGGGAAGGTCTGGAGATCTATGGTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR CAA 90 bp | CATGGCTTGGTCCTCATGTGGCTGCCCTGGCTCAATGGACACTGTCTTGAATTGTTTCAGAAAGGCTGCTaGCACCGGCACCCAGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: HGLVLMWLPWLNGHCLELFQKGC*HRHPEQ Trigger: CTGTTCTGGGTGCCGGTGCAAGCAGCCTTTCTGAAA...CAATTCAAGACAGTGTCCATTGAGCCAGGGCAGCCACATGAGGACCAAGCCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCCTTTCAGCGAGGAGCTTTCTGTCCATGGCTTGGTCCTCATGTGGCTGCCTTTCAGAAAGGCTGCTaGCACCGGCACCCAGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: FSFQRGAFCPWLGPHVAAFQKGC*HRHPEQ Trigger: CTGTTCTGGGTGCCGGTGCAAGCAGCCTTTCTGAAA...GGCAGCCACATGAGGACCAAGCCATGGACAGAAAGCTCCTCGCTGAAAGGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR CAA 90 bp | AGTCAGGAAGCCTCTTGTCAGTTGAACTCAGTTGAGAGTTGTGGCTCTCTGGGGTTTCAGAAAGGCTGCTaGCACCGGCACCCAGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: SQEASCQLNSVESCGSLGFQKGC*HRHPEQ Trigger: CTGTTCTGGGTGCCGGTGCAAGCAGCCTTTCTGAAA...CCCCAGAGAGCCACAACTCTCAACTGAGTTCAACTGACAAGAGGCTTCCTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR CAA 90 bp | AACGACTTAGCAGAGTTCTCCAGCTCTGAGGTAGTGTCAGTCATAATAGGTTCTGGGCTGCTGGAGGGCTaGGGAGGAGAGAGAGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: NDLAEFSSSEVVSVIIGSGLLEG*GGERAL Trigger: CAGAGCTCTCTCTCCTCCCAAGCCCTCCAGCAGCCC...AGAACCTATTATGACTGACACTACCTCAGAGCTGGAGAACTCTGCTAAGTCGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CAA 90 bp | GGCTTGGTCCTCATGTGGCTGCCCTGGCTCAATGGACACTGTCTTGAATTGTACTCATTGAGACTGTACTaGTGGGCTGCTGGAGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GLVLMWLPWLNGHCLELYSLRLY*WAAGGL Trigger: AAGCCCTCCAGCAGCCCACAAGTACAGTCTCAATGA...GTACAATTCAAGACAGTGTCCATTGAGCCAGGGCAGCCACATGAGGACCAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CAA 90 bp | ATGTCACAGTACTTACGATCCTTTCCAGGGCCTGATGCGGCTGCCCTGAAATCCTCATTGAGACTGTACTaGTGGGCTGCTGGAGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: MSQYLRSFPGPDAAALKSSLRLY*WAAGGL Trigger: AAGCCCTCCAGCAGCCCACAAGTACAGTCTCAATGA...GGATTTCAGGGCAGCCGCATCAGGCCCTGGAAAGGATCGTAAGTACTGTGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CAA 90 bp | CAGTTGAACTCAGTTGAGAGTTGTGGCTCTCTGGGGCATCATGTCCACTGCGTGTCATTGAGACTGTACTaGTGGGCTGCTGGAGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QLNSVESCGSLGHHVHCVSLRLY*WAAGGL Trigger: AAGCCCTCCAGCAGCCCACAAGTACAGTCTCAATGA...CACGCAGTGGACATGATGCCCCAGAGAGCCACAACTCTCAACTGAGTTCAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS GCA 90 bp | GCAACCAAATCTTCAAACTGGAAGGGGGCAACCAGCTTTCTCCCGTaGAAGCCCTCGTGCTGGATAATGCAGTGCACGGTTGAGTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ATKSSNWKGATSFLP*KPSCWIMQCTVEFL Trigger: CAAAAACTCAACCGTGCACTGCATTATCCAGCACGAGGGCTTGCACGGGAGAAAGCTGGTTGCCCCCTTCCAGTTTGAAGATTTGGTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR CAA 90 bp | CAGCGAGGAGCTTTCTGTCCATGGCTTGGTCCTCATGTGGCTGCCCTGGCTCAATGGAATTTTCCATCATaGAGACTGTACTTGTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QRGAFCPWLGPHVAALAQWNFPS*RLYLWA Trigger: AGCCCACAAGTACAGTCTCAATGATGGAAAATTCCA...TTGAGCCAGGGCAGCCACATGAGGACCAAGCCATGGACAGAAAGCTCCTCGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGCTCATTCCCTTCCTCTCAACCCCCTACAGGTACACTCTTCCCAAACAGTGCACTCTTCTTTGTTTaGGCTCCCGAGTATAACCGC | + |
|
Preference number: 5 (lower is better) Translates to: PGSFPSSQPPTGTLFPNSALFFV*APEYNR Trigger: GCGGTTATACTCGGGAGCCAAAACAAAGAAGAGTGC...ACTGTTTGGGAAGAGTGTACCTGTAGGGGGTTGAGAGGAAGGGAATGAGCCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CAA 90 bp | AGTCAGGAAGCCTCTTGTCAGTTGAACTCAGTTGAGAGTTGTGGCTCTCTGGGGGCACTCTTCTTTGTTTaGGCTCCCGAGTATAACCGC | + |
|
Preference number: 5 (lower is better) Translates to: SQEASCQLNSVESCGSLGALFFV*APEYNR Trigger: GCGGTTATACTCGGGAGCCAAAACAAAGAAGAGTGC...CCCCAGAGAGCCACAACTCTCAACTGAGTTCAACTGACAAGAGGCTTCCTGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS CCA 90 bp | TTCTCTCCATTCTGCCTTCTGAGAACCAAAGCTTCCACGGTTGGCTaGAAAGGAGTCACTAACACGGTCACTCTCACTTGCTTCGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FSPFCLLRTKASTVG*KGVTNTVTLTCFVF Trigger: GAAGACGAAGCAAGTGAGAGTGACCGTGTTAGTGACTCCTTTCCAGCCAACCGTGGAAGCTTTGGTTCTCAGAAGGCAGAATGGAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS-3UTR CAA 90 bp | TGTCTGTGCACCTGTGTGCATGTCAAAGGCTTCCACACAGAGGGGCCACACATGTGGAATTTTCCATCATaGAGACTGTACTTGTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CLCTCVHVKGFHTEGPHMWNFPS*RLYLWA Trigger: AGCCCACAAGTACAGTCTCAATGATGGAAAATTCCA...CATGTGTGGCCCCTCTGTGTGGAAGCCTTTGACATGCACACAGGTGCACAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTTTCAGCGAGGAGCTTTCTGTCCATGGCTTGGTCCTCATGTGGCTGCCCTTGTTCTTTCTCTTCCTaGTCAGTCTCTGGTATACTG | + |
|
Preference number: 5 (lower is better) Translates to: FLSARSFLSMAWSSCGCPCSFSS*SVSGIL Trigger: CAGTATACCAGAGACTGACAAGGAAGAGAAAGAACA...AGGGCAGCCACATGAGGACCAAGCCATGGACAGAAAGCTCCTCGCTGAAAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CAA 90 bp | CATGGCTTGGTCCTCATGTGGCTGCCCTGGCTCAATGGACACTGTCTTGAATTGTGGAATTTTCCATCATaGAGACTGTACTTGTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HGLVLMWLPWLNGHCLELWNFPS*RLYLWA Trigger: AGCCCACAAGTACAGTCTCAATGATGGAAAATTCCA...CAATTCAAGACAGTGTCCATTGAGCCAGGGCAGCCACATGAGGACCAAGCCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGCTCATTCCCTTCCTCTCAACCCCCTACAGGTACACTCTTCCCAAACAGTCCTCGTTGTTGGATCTaGATCTGTAACTTTCTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PGSFPSSQPPTGTLFPNSPRCWI*ICNFLE Trigger: CTCTAGAAAGTTACAGATCAAGATCCAACAACGAGG...ACTGTTTGGGAAGAGTGTACCTGTAGGGGGTTGAGAGGAAGGGAATGAGCCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS CCA 90 bp | GGGGAGCCTGGCTGCTATTCTCCTGGGAAGATGTCTCCTCGTTGTTaGATCTTGATCTGTAACTTTCTAGAGCTTGCTCTGAAATTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: GEPGCYSPGKMSPRC*ILICNFLELALKFH Trigger: GTGAAATTTCAGAGCAAGCTCTAGAAAGTTACAGATCAAGATCCAACAACGAGGAGACATCTTCCCAGGAGAATAGCAGCCAGGCTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CAA 90 bp | ATTATCATAGGAGGGATAGGACCAGGAAGAGCTGGGGTCTACAATAACACATTCTCATTGAGACTGTACTaGTGGGCTGCTGGAGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: IIIGGIGPGRAGVYNNTFSLRLY*WAAGGL Trigger: AAGCCCTCCAGCAGCCCACAAGTACAGTCTCAATGA...GAATGTGTTATTGTAGACCCCAGCTCTTCCTGGTCCTATCCCTCCTATGATAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CAA 90 bp | ACAGCTCCCACCACCTCATTCCATTCTAAATGTCCCCTGCAGTCCTCTTACTACTGTTCTTTCTCTTCCTaGTCAGTCTCTGGTATACTG | + |
|
Preference number: 5 (lower is better) Translates to: TAPTTSFHSKCPLQSSYYCSFSS*SVSGIL Trigger: CAGTATACCAGAGACTGACAAGGAAGAGAAAGAACA...GTAGTAAGAGGACTGCAGGGGACATTTAGAATGGAATGAGGTGGTGGGAGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTCAGACCAAATCATATAGTGGAGAACTTGCCACCAGCCCACCGAAGCACATGTTCTTTCTCTTCCTaGTCAGTCTCTGGTATACTG | + |
|
Preference number: 5 (lower is better) Translates to: CVRPNHIVENLPPAHRSTCSFSS*SVSGIL Trigger: CAGTATACCAGAGACTGACAAGGAAGAGAAAGAACA...TGTGCTTCGGTGGGCTGGTGGCAAGTTCTCCACTATATGATTTGGTCTGACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CAA 90 bp | CAAAAGCCATGGCAACTATCACAAATCCTGGATCCTAAATGCCAGAGTCCATTGGCACTCTTCTTTGTTTaGGCTCCCGAGTATAACCGC | + |
|
Preference number: 5 (lower is better) Translates to: QKPWQLSQILDPKCQSPLALFFV*APEYNR Trigger: GCGGTTATACTCGGGAGCCAAAACAAAGAAGAGTGC...CAATGGACTCTGGCATTTAGGATCCAGGATTTGTGATAGTTGCCATGGCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CAA 90 bp | ATGTGGCTGCCCTGGCTCAATGGACACTGTCTTGAATTGTACTCAATGGACATTCCTCGTTGTTGGATCTaGATCTGTAACTTTCTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: MWLPWLNGHCLELYSMDIPRCWI*ICNFLE Trigger: CTCTAGAAAGTTACAGATCAAGATCCAACAACGAGG...AATGTCCATTGAGTACAATTCAAGACAGTGTCCATTGAGCCAGGGCAGCCACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CAA 90 bp | TGCCCTGGCTCAATGGACACTGTCTTGAATTGTACTCAATGGACATTCTATTTTGCACTCTTCTTTGTTTaGGCTCCCGAGTATAACCGC | + |
|
Preference number: 5 (lower is better) Translates to: CPGSMDTVLNCTQWTFYFALFFV*APEYNR Trigger: GCGGTTATACTCGGGAGCCAAAACAAAGAAGAGTGC...AAAATAGAATGTCCATTGAGTACAATTCAAGACAGTGTCCATTGAGCCAGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CAA 90 bp | AACGACTTAGCAGAGTTCTCCAGCTCTGAGGTAGTGTCAGTCATAATAGGTTCTCCTCGTTGTTGGATCTaGATCTGTAACTTTCTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: NDLAEFSSSEVVSVIIGSPRCWI*ICNFLE Trigger: CTCTAGAAAGTTACAGATCAAGATCCAACAACGAGG...AGAACCTATTATGACTGACACTACCTCAGAGCTGGAGAACTCTGCTAAGTCGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS-3UTR CAA 90 bp | GACTCTTTAGAAAATACTGATTCCAAACGCTTCCCTGAATCTTCTGACACCAGCTGGAATTTTCCATCATaGAGACTGTACTTGTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: DSLENTDSKRFPESSDTSWNFPS*RLYLWA Trigger: AGCCCACAAGTACAGTCTCAATGATGGAAAATTCCA...GCTGGTGTCAGAAGATTCAGGGAAGCGTTTGGAATCAGTATTTTCTAAAGAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
||
| CDS TCA 72 bp | CACCATAGATCTCCAGACCTTCCCCCAGCAGCCAGGTaGTTTGTGGCGGGGGCTTGCTTCTCTCTGTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: HHRSPDLPPAAR*FVAGACFSLWN Trigger: GTTCCACAGAGAGAAGCAAGCCCCCGCCACAAATCACCTGGCTGCTGGGGGAAGGTCTGGAGATCTATGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
||
| CDS CCA 72 bp | CACTCTTCCTCCGGGCCAGTCCTGTATGCTGAGCACTaGCTTCAGTGGACAAGCCAGGGTCTTGAGTGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: HSSSGPVLYAEH*LQWTSQGLEWH Trigger: ATGCCACTCAAGACCCTGGCTTGTCCACTGAAGCCAGTGCTCAGCATACAGGACTGGCCCGGAGGAAGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 |
||
| CDS CCA 72 bp | CACTCTTCCTCCGGGCCAGTCCTGTATGCTGAGCACTaGCAGTGGACAAGCCAGGGTCTTGAGTGGCATGTT | + |
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Preference number: 6 (lower is better) Translates to: HSSSGPVLYAEH*QWTSQGLEWHV Trigger: AACATGCCACTCAAGACCCTGGCTTGTCCACTGCCAGTGCTCAGCATACAGGACTGGCCCGGAGGAAGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188848.8 |
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| CDS CAA 72 bp | CCCTCGTGCTGGATAATGCAGTGCACGGTTGAGTTTTaGCCGTATGCGCGGGCGATGAGCATGCTGCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: PSCWIMQCTVEF*PYARAMSMLLV Trigger: CACCAGCAGCATGCTCATCGCCCGCGCATACGGCAAAAACTCAACCGTGCACTGCATTATCCAGCACGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
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| CDS TCA 72 bp | GTGCAAGCCCTCGTGCTGGATAATGCAGTGCACGGTTaGGTTTTTGCCGTATGCGCGGGCGATGAGCATGCT | + |
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Preference number: 6 (lower is better) Translates to: VQALVLDNAVHG*VFAVCAGDEHA Trigger: AGCATGCTCATCGCCCGCGCATACGGCAAAAACTCAACCGTGCACTGCATTATCCAGCACGAGGGCTTGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
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| CDS GCA 72 bp | TTTCTCCCGTGCAAGCCCTCGTGCTGGATAATGCAGTaGACGGTTGAGTTTTTGCCGTATGCGCGGGCGATG | + |
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Preference number: 6 (lower is better) Translates to: FLPCKPSCWIMQ*TVEFLPYARAM Trigger: CATCGCCCGCGCATACGGCAAAAACTCAACCGTGCACTGCATTATCCAGCACGAGGGCTTGCACGGGAGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
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| CDS CCA 72 bp | GATCTCCAGACCTTCCCCCAGCAGCCAGGTGATTTGTaGCGGGGGCTTGCTTCTCTCTGTGGAACATTTCAG | + |
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Preference number: 6 (lower is better) Translates to: DLQTFPQQPGDL*RGLASLCGTFQ Trigger: CTGAAATGTTCCACAGAGAGAAGCAAGCCCCCGCCACAAATCACCTGGCTGCTGGGGGAAGGTCTGGAGATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
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| CDS CCA 72 bp | GGGACACGGCTGTGCTTGCCTCCGAGCTTCCAGTGCTaGGCACTCTTCTTTGTTTTGGCTCCCGAGTATAAC | + |
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Preference number: 6 (lower is better) Translates to: GTRLCLPPSFQC*ALFFVLAPEYN Trigger: GTTATACTCGGGAGCCAAAACAAAGAAGAGTGCCCAGCACTGGAAGCTCGGAGGCAAGCACAGCCGTGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| CDS CAA 72 bp | CTCTACCGTGACGGTCTCCATTTTCAGAAAGGCTGCTaGCACCGGCACCCAGAACAGCAAACTGAGGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LYRDGLHFQKGC*HRHPEQQTEGS Trigger: GGAGCCCTCAGTTTGCTGTTCTGGGTGCCGGTGCAAGCAGCCTTTCTGAAAATGGAGACCGTCACGGTAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
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| CDS GCA 72 bp | TTCCTCTACCGTGACGGTCTCCATTTTCAGAAAGGCTaGTTGCACCGGCACCCAGAACAGCAAACTGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: FLYRDGLHFQKG*LHRHPEQQTEG Trigger: GCCCTCAGTTTGCTGTTCTGGGTGCCGGTGCAAGCAGCCTTTCTGAAAATGGAGACCGTCACGGTAGAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
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| CDS GCA 72 bp | TCTTCAAACTGGAAGGGGGCAACCAGCTTTCTCCCGTaGAAGCCCTCGTGCTGGATAATGCAGTGCACGGTT | + |
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Preference number: 6 (lower is better) Translates to: SSNWKGATSFLP*KPSCWIMQCTV Trigger: AACCGTGCACTGCATTATCCAGCACGAGGGCTTGCACGGGAGAAAGCTGGTTGCCCCCTTCCAGTTTGAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
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| CDS CAA 90 bp | GAGTTCACCATAGATCTCCAGACCTTCCCCCAGCAGCCAGGTGATTaGTGGCGGGGGCTTGCTTCTCTCTGTGGAACATTTCAGCACAAC | + |
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Preference number: 6 (lower is better) Translates to: EFTIDLQTFPQQPGD*WRGLASLCGTFQHN Trigger: GTTGTGCTGAAATGTTCCACAGAGAGAAGCAAGCCCCCGCCACAAATCACCTGGCTGCTGGGGGAAGGTCTGGAGATCTATGGTGAACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
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| CDS CAA 90 bp | CCGTGCAAGCCCTCGTGCTGGATAATGCAGTGCACGGTTGAGTTTTaGCCGTATGCGCGGGCGATGAGCATGCTGCTGGTGTTACATATT | + |
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Preference number: 6 (lower is better) Translates to: PCKPSCWIMQCTVEF*PYARAMSMLLVLHI Trigger: AATATGTAACACCAGCAGCATGCTCATCGCCCGCGCATACGGCAAAAACTCAACCGTGCACTGCATTATCCAGCACGAGGGCTTGCACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
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| CDS CAA 72 bp | ATAGATCTCCAGACCTTCCCCCAGCAGCCAGGTGATTaGTGGCGGGGGCTTGCTTCTCTCTGTGGAACATTT | + |
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Preference number: 6 (lower is better) Translates to: IDLQTFPQQPGD*WRGLASLCGTF Trigger: AAATGTTCCACAGAGAGAAGCAAGCCCCCGCCACAAATCACCTGGCTGCTGGGGGAAGGTCTGGAGATCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
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| CDS CCA 72 bp | TTCTGCCTTCTGAGAACCAAAGCTTCCACGGTTGGCTaGAAAGGAGTCACTAACACGGTCACTCTCACTTGC | + |
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Preference number: 6 (lower is better) Translates to: FCLLRTKASTVG*KGVTNTVTLTC Trigger: GCAAGTGAGAGTGACCGTGTTAGTGACTCCTTTCCAGCCAACCGTGGAAGCTTTGGTTCTCAGAAGGCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
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| CDS CAA 72 bp | CCTTGTCAGTCTCTGGTATACTGGAATTTTCCATCATaGAGACTGTACTTGTGGGCTGCTGGAGGGCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: PCQSLVYWNFPS*RLYLWAAGGLG Trigger: CCCAAGCCCTCCAGCAGCCCACAAGTACAGTCTCAATGATGGAAAATTCCAGTATACCAGAGACTGACAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| CDS TCA 72 bp | ATTTCAGCACAACCGATTTCTCTCCATTCTGCCTTCTaGGAACCAAAGCTTCCACGGTTGGCTGGAAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: ISAQPISLHSAF*EPKLPRLAGKE Trigger: CTCCTTTCCAGCCAACCGTGGAAGCTTTGGTTCTCAGAAGGCAGAATGGAGAGAAATCGGTTGTGCTGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
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| CDS CCA 72 bp | GGCTGCTATTCTCCTGGGAAGATGTCTCCTCGTTGTTaGATCTTGATCTGTAACTTTCTAGAGCTTGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: GCYSPGKMSPRC*ILICNFLELAL Trigger: CAGAGCAAGCTCTAGAAAGTTACAGATCAAGATCCAACAACGAGGAGACATCTTCCCAGGAGAATAGCAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| CDS CAA 90 bp | CCTGGCTGCTATTCTCCTGGGAAGATGTCTCCTCGTTGTTGGATCTaGATCTGTAACTTTCTAGAGCTTGCTCTGAAATTTCACTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: PGCYSPGKMSPRCWI*ICNFLELALKFHFP Trigger: AGGAAAGTGAAATTTCAGAGCAAGCTCTAGAAAGTTACAGATCAAGATCCAACAACGAGGAGACATCTTCCCAGGAGAATAGCAGCCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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| CDS CAA 72 bp | AAGCATGTATACACACCTTCCTCTCGGAGAGTTACATaGGACACACTAATGGAGAGTTGTGTAGCTGAATGG | + |
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Preference number: 6 (lower is better) Translates to: KHVYTPSSRRVT*DTLMESCVAEW Trigger: CCATTCAGCTACACAACTCTCCATTAGTGTGTCCAATGTAACTCTCCGAGAGGAAGGTGTGTATACATGCTT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000188848.8 |
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| CDS CAA 72 bp | TATTCTCCTGGGAAGATGTCTCCTCGTTGTTGGATCTaGATCTGTAACTTTCTAGAGCTTGCTCTGAAATTT | + |
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Preference number: 6 (lower is better) Translates to: YSPGKMSPRCWI*ICNFLELALKF Trigger: AAATTTCAGAGCAAGCTCTAGAAAGTTACAGATCAAGATCCAACAACGAGGAGACATCTTCCCAGGAGAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034519.13 ENSMUST00000180384.3 ENSMUST00000180872.9 ENSMUST00000188848.8 |
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