Pregenerated sensors for CRTAC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042401Ensembl transcript IDs: ENSMUST00000048630.8, ENSMUST00000238182.2, ENSMUST00000238290.2
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCTGCTGTCCGTTCGAAGGAGCACATGGCGGGATCTATGGGGTGTaGAGAGAGGTAGGCAGCAGGAGAGATATAGTTTTCCACAAAGGT | + |
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Preference number: 1 (lower is better) Translates to: PCCPFEGAHGGIYGV*REVGSRRDIVFHKG Trigger: ACCTTTGTGGAAAACTATATCTCTCCTGCTGCCTACCTCTCTCCACACCCCATAGATCCCGCCATGTGCTCCTTCGAACGGACAGCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| 3UTR CCA 90 bp | CAACTAAGGTCCCATCAGTATCTCCCAAACTTCCCTTTTCAAAGATaGCCACCCCTGCTGTCCGTTCGAAGGAGCACATGGCGGGATCTA | + |
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Preference number: 1 (lower is better) Translates to: QLRSHQYLPNFPFQR*PPLLSVRRSTWRDL Trigger: TAGATCCCGCCATGTGCTCCTTCGAACGGACAGCAGGGGTGGCCATCTTTGAAAAGGGAAGTTTGGGAGATACTGATGGGACCTTAGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGCACAGGCCGGATCAGCAGGCACAGGATACATTACTGAATCAACCGAGCATGACTGGACTCTCTTaGTTCTTCTCACGGAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: QQHRPDQQAQDTLLNQPSMTGLS*FFSRKE Trigger: CTCCTTCCGTGAGAAGAACCAAGAGAGTCCAGTCAT...GCTCGGTTGATTCAGTAATGTATCCTGTGCCTGCTGATCCGGCCTGTGCTGCTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| 3UTR-3UTR CCA 90 bp | AATCATAGGAAATCAGGTTGTACAAAGCAGCAGCAGCAGCACAGGCCGGATCAGTTCCCTTTTCAAAGATaGCCACCCCTGCTGTCCGTT | + |
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Preference number: 2 (lower is better) Translates to: NHRKSGCTKQQQQHRPDQFPFQR*PPLLSV Trigger: AACGGACAGCAGGGGTGGCCATCTTTGAAAAGGGAA...CTGATCCGGCCTGTGCTGCTGCTGCTGCTTTGTACAACCTGATTTCCTATGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTCACCAACAACTAAGGTCCCATCAGTATCTCCCAAACTTCCCTTTTCAAAGACATGGCGGGATCTATaGGGTGTGGAGAGAGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: ASPTTKVPSVSPKLPFSKTWRDL*GVERGR Trigger: CCTACCTCTCTCCACACCCCATAGATCCCGCCATGT...CTTTGAAAAGGGAAGTTTGGGAGATACTGATGGGACCTTAGTTGTTGGTGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| 3UTR CCA 72 bp | AGATGGCCACCCCTGCTGTCCGTTCGAAGGAGCACATaGCGGGATCTATGGGGTGTGGAGAGAGGTAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: RWPPLLSVRRST*RDLWGVERGRQ Trigger: CTGCCTACCTCTCTCCACACCCCATAGATCCCGCCATGTGCTCCTTCGAACGGACAGCAGGGGTGGCCATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| 3UTR TCA 72 bp | AGGCAAAGTCCCAGGCCTAGAGAAAGATACGAGGCCTaGGAGAGAGGCTCAGAGAGTCTAAAGGCAGCCGAT | + |
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Preference number: 3 (lower is better) Translates to: RQSPRPRERYEA*ERGSESLKAAD Trigger: ATCGGCTGCCTTTAGACTCTCTGAGCCTCTCTCTCAGGCCTCGTATCTTTCTCTAGGCCTGGGACTTTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238182.2 |
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| 3UTR CCA 72 bp | CCGTTCGAAGGAGCACATGGCGGGATCTATGGGGTGTaGAGAGAGGTAGGCAGCAGGAGAGATATAGTTTTC | + |
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Preference number: 3 (lower is better) Translates to: PFEGAHGGIYGV*REVGSRRDIVF Trigger: GAAAACTATATCTCTCCTGCTGCCTACCTCTCTCCACACCCCATAGATCCCGCCATGTGCTCCTTCGAACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| 3UTR-3UTR CAA 90 bp | CAGGCCGGATCAGCAGGCACAGGATACATTACTGAATCAACCGAGCCAGCAACCACCCAGGAGCCATCTTaGTCAAGGGCAAAACAAGAA | + |
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Preference number: 3 (lower is better) Translates to: QAGSAGTGYITESTEPATTQEPS*SRAKQE Trigger: TTCTTGTTTTGCCCTTGACAAAGATGGCTCCTGGGT...GGTTGCTGGCTCGGTTGATTCAGTAATGTATCCTGTGCCTGCTGATCCGGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| 3UTR CCA 72 bp | GAAGCTCACGAAGATACAGAAATGACTGGACTCTCTTaGTTCTTCTCACGGAAGGAGGGGTGGGGTAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: EAHEDTEMTGLS*FFSRKEGWGRG Trigger: TCCTCTACCCCACCCCTCCTTCCGTGAGAAGAACCAAGAGAGTCCAGTCATTTCTGTATCTTCGTGAGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| 3UTR TCA 72 bp | GGGCAAAACAAGAAGAAGCTCACGAAGATACAGAAATaGCTGGACTCTCTTGGTTCTTCTCACGGAAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: GQNKKKLTKIQK*LDSLGSSHGRR Trigger: CCTCCTTCCGTGAGAAGAACCAAGAGAGTCCAGTCATTTCTGTATCTTCGTGAGCTTCTTCTTGTTTTGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| 3UTR CCA 72 bp | AAAACAAGAAGAAGCTCACGAAGATACAGAAATGACTaGACTCTCTTGGTTCTTCTCACGGAAGGAGGGGTG | + |
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Preference number: 3 (lower is better) Translates to: KTRRSSRRYRND*TLLVLLTEGGV Trigger: CACCCCTCCTTCCGTGAGAAGAACCAAGAGAGTCCAGTCATTTCTGTATCTTCGTGAGCTTCTTCTTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR CCA 90 bp | TGTCCGTTCGAAGGAGCACATGGCGGGATCTATGGGGTGTGGAGAGAGGTAGGCCAACCTTGGCGCCCCTaGCAAAGGCCCCGAACCGGG | + |
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Preference number: 4 (lower is better) Translates to: CPFEGAHGGIYGVWREVGQPWRP*QRPRTG Trigger: CCCGGTTCGGGGCCTTTGCCAGGGGCGCCAAGGTTG...GCCTACCTCTCTCCACACCCCATAGATCCCGCCATGTGCTCCTTCGAACGGACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR TCA 90 bp | TGTCCGTTCGAAGGAGCACATGGCGGGATCTATGGGGTGTGGAGAGAGGTAGGCCGATGTCACAGGCTGTaGCCCCGATGGCGTTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: CPFEGAHGGIYGVWREVGRCHRL*PRWRSP Trigger: AGGGGAACGCCATCGGGGTCACAGCCTGTGACATCG...GCCTACCTCTCTCCACACCCCATAGATCCCGCCATGTGCTCCTTCGAACGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR CCA 90 bp | AAAGATGGCCACCCCTGCTGTCCGTTCGAAGGAGCACATGGCGGGATCTATGGGGTCCCGCAAAGAGGCTaGCCACTCCACGGGCCACAT | + |
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Preference number: 4 (lower is better) Translates to: KDGHPCCPFEGAHGGIYGVPQRG*PLHGPH Trigger: ATGTGGCCCGTGGAGTGGCCAGCCTCTTTGCGGGAC...CCCATAGATCCCGCCATGTGCTCCTTCGAACGGACAGCAGGGGTGGCCATCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR TCA 90 bp | CCTTTTCAAAGATGGCCACCCCTGCTGTCCGTTCGAAGGAGCACATGGCGGGATTCTGGGATCCCCCAGTaGGAGGCAGAAGCCACAGGG | + |
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Preference number: 4 (lower is better) Translates to: PFQRWPPLLSVRRSTWRDSGIPQ*EAEATG Trigger: CCCTGTGGCTTCTGCCTCTCACTGGGGGATCCCAGA...ATCCCGCCATGTGCTCCTTCGAACGGACAGCAGGGGTGGCCATCTTTGAAAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR CCA 90 bp | CCTTTTCAAAGATGGCCACCCCTGCTGTCCGTTCGAAGGAGCACATGGCGGGATACTTCAGAACCAGGTTaGGGCCGGTGTACCCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: PFQRWPPLLSVRRSTWRDTSEPG*GRCTPP Trigger: TGGCGGGGTACACCGGCCCCAACCTGGTTCTGAAGT...ATCCCGCCATGTGCTCCTTCGAACGGACAGCAGGGGTGGCCATCTTTGAAAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR TCA 90 bp | CAGCAGCACAGGCCGGATCAGCAGGCACAGGATACATTACTGAATCAACCGAGCCAGGGTCCATTTCGATaGGGGCATCAGGCCCCACAT | + |
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Preference number: 4 (lower is better) Translates to: QQHRPDQQAQDTLLNQPSQGPFR*GHQAPH Trigger: ATGTGGGGCCTGATGCCCTCATCGAAATGGACCCTG...GCTCGGTTGATTCAGTAATGTATCCTGTGCCTGCTGATCCGGCCTGTGCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR TCA 90 bp | GCTTCACCAACAACTAAGGTCCCATCAGTATCTCCCAAACTTCCCTTTTCAAAGCAGCCGCCACGTCCCTaGGTGCCAGGATCCCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: ASPTTKVPSVSPKLPFSKQPPRP*VPGSPG Trigger: CCCGGGGGATCCTGGCACTCAGGGACGTGGCGGCTG...CTTTGAAAAGGGAAGTTTGGGAGATACTGATGGGACCTTAGTTGTTGGTGAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR GCA 90 bp | CAGCAGCACAGGCCGGATCAGCAGGCACAGGATACATTACTGAATCAACCGAGCACGTCACCTCCACACTaGTGGCTTCATCCCGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: QQHRPDQQAQDTLLNQPSTSPPH*WLHPVP Trigger: TGGGACGGGATGAAGCCAGCAGTGTGGAGGTGACGT...GCTCGGTTGATTCAGTAATGTATCCTGTGCCTGCTGATCCGGCCTGTGCTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR CCA 90 bp | CAGGCCGGATCAGCAGGCACAGGATACATTACTGAATCAACCGAGCCAGCAACCCCGGAAGACAGACAGTaGCTGAGCCATGGACTCTCC | + |
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Preference number: 4 (lower is better) Translates to: QAGSAGTGYITESTEPATPEDRQ*LSHGLS Trigger: GGAGAGTCCATGGCTCAGCCACTGTCTGTCTTCCGG...GGTTGCTGGCTCGGTTGATTCAGTAATGTATCCTGTGCCTGCTGATCCGGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR TCA 90 bp | GATCAGCAGGCACAGGATACATTACTGAATCAACCGAGCCAGCAACCACCCAGGCCTAAAAAGGCCACTTaGGCCACACAGGCTGTGCCG | + |
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Preference number: 4 (lower is better) Translates to: DQQAQDTLLNQPSQQPPRPKKAT*ATQAVP Trigger: CGGCACAGCCTGTGTGGCTCAAGTGGCCTTTTTAGG...CCTGGGTGGTTGCTGGCTCGGTTGATTCAGTAATGTATCCTGTGCCTGCTGATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR GCA 90 bp | CTTCCCTTTTCAAAGATGGCCACCCCTGCTGTCCGTTCGAAGGAGCACATGGCGTCAATGATCCGTAGGTaGGCCCCACTCTTCTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: LPFSKMATPAVRSKEHMASMIRR*APLFLV Trigger: CACCAAGAAGAGTGGGGCGCACCTACGGATCATTGA...CGCCATGTGCTCCTTCGAACGGACAGCAGGGGTGGCCATCTTTGAAAAGGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR CCA 90 bp | CAGGCCGGATCAGCAGGCACAGGATACATTACTGAATCAACCGAGCCAGCAACCAGTTCATCTCCTCGCTaGCCACACTTCGGCTCACCA | + |
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Preference number: 4 (lower is better) Translates to: QAGSAGTGYITESTEPATSSSPR*PHFGSP Trigger: TGGTGAGCCGAAGTGTGGCCAGCGAGGAGATGAACT...GGTTGCTGGCTCGGTTGATTCAGTAATGTATCCTGTGCCTGCTGATCCGGCCTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR CCA 90 bp | GGCAAAGTCCCAGGCCTAGAGAAAGATACGAGGCCTGAGAGAGAGGCTCAGAGAAGTTCATCTCCTCGCTaGCCACACTTCGGCTCACCA | + |
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Preference number: 4 (lower is better) Translates to: GKVPGLEKDTRPEREAQRSSSPR*PHFGSP Trigger: TGGTGAGCCGAAGTGTGGCCAGCGAGGAGATGAACT...TCTCTGAGCCTCTCTCTCAGGCCTCGTATCTTTCTCTAGGCCTGGGACTTTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238182.2 |
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| CDS-3UTR TCA 90 bp | TTCCGTCGCCACCACCAATCCAATAAGGCTTCCGTAATCATAGGAAATCAGGTTGGAGCAAAGCCATCCTaGCCATGCCCGGGTCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: FRRHHQSNKASVIIGNQVGAKPS*PCPGQR Trigger: GCGCTGACCCGGGCATGGTCAGGATGGCTTTGCTCC...AACCTGATTTCCTATGATTACGGAAGCCTTATTGGATTGGTGGTGGCGACGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR TCA 90 bp | TTCCGTCGCCACCACCAATCCAATAAGGCTTCCGTAATCATAGGAAATCAGGTTCCGCTGTGTACTTGCTaGCCCCAGCCTCAGCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: FRRHHQSNKASVIIGNQVPLCTC*PQPQPP Trigger: TGGCGGCTGAGGCTGGGGTCAGCAAGTACACAGCGG...AACCTGATTTCCTATGATTACGGAAGCCTTATTGGATTGGTGGTGGCGACGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR TCA 90 bp | AAAGATGGCCACCCCTGCTGTCCGTTCGAAGGAGCACATGGCGGGATCTATGGGCATGGACTCTCCATGTaGCAAGATGAGATCCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: KDGHPCCPFEGAHGGIYGHGLSM*QDEIQH Trigger: ATGCTGGATCTCATCTTGTCACATGGAGAGTCCATG...CCCATAGATCCCGCCATGTGCTCCTTCGAACGGACAGCAGGGGTGGCCATCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR TCA 90 bp | CAGGCCGGATCAGCAGGCACAGGATACATTACTGAATCAACCGAGCCAGCAACCAAGACAGACAGTGGCTaGGCCATGGACTCTCCATGT | + |
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Preference number: 4 (lower is better) Translates to: QAGSAGTGYITESTEPATKTDSG*AMDSPC Trigger: ACATGGAGAGTCCATGGCTCAGCCACTGTCTGTCTT...GGTTGCTGGCTCGGTTGATTCAGTAATGTATCCTGTGCCTGCTGATCCGGCCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR CCA 90 bp | AGGAAATCAGGTTGTACAAAGCAGCAGCAGCAGCACAGGCCGGATCAGCAGGCATGTGGAAGAGGAAGTTaGGCCCGTTCTCGTTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: RKSGCTKQQQQHRPDQQACGRGS*ARSRCH Trigger: GTGACAACGAGAACGGGCCCAACTTCCTCTTCCACA...TGCCTGCTGATCCGGCCTGTGCTGCTGCTGCTGCTTTGTACAACCTGATTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR CCA 90 bp | GAGCCAGCAACCACCCAGGAGCCATCTTTGTCAAGGGCAAAACAAGAAGAAGCTCCGTTGCCTTGGTTGTaGAAGAGGAAGTTGGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: EPATTQEPSLSRAKQEEAPLPWL*KRKLGP Trigger: CGGGCCCAACTTCCTCTTCCACAACCAAGGCAACGG...AGCTTCTTCTTGTTTTGCCCTTGACAAAGATGGCTCCTGGGTGGTTGCTGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR CCA 90 bp | AATCATAGGAAATCAGGTTGTACAAAGCAGCAGCAGCAGCACAGGCCGGATCAGGGACAGGGGAGGGCGTaGAGAACTTGGGCGAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: NHRKSGCTKQQQQHRPDQGQGRA*RTWAKQ Trigger: TTGCTTCGCCCAAGTTCTCCACGCCCTCCCCTGTCC...CTGATCCGGCCTGTGCTGCTGCTGCTGCTTTGTACAACCTGATTTCCTATGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR CCA 90 bp | CTTCCCTTTTCAAAGATGGCCACCCCTGCTGTCCGTTCGAAGGAGCACATGGCGACAGTGGCTGAGCCATaGACTCTCCATGTGACAAGA | + |
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Preference number: 4 (lower is better) Translates to: LPFSKMATPAVRSKEHMATVAEP*TLHVTR Trigger: TCTTGTCACATGGAGAGTCCATGGCTCAGCCACTGT...CGCCATGTGCTCCTTCGAACGGACAGCAGGGGTGGCCATCTTTGAAAAGGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR TCA 90 bp | CCTTTTCAAAGATGGCCACCCCTGCTGTCCGTTCGAAGGAGCACATGGCGGGATGTCACAGAAGATATCTaGGGCACTGCTGCTGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: PFQRWPPLLSVRRSTWRDVTEDI*GTAAEN Trigger: ATTCTCAGCAGCAGTGCCTCAGATATCTTCTGTGAC...ATCCCGCCATGTGCTCCTTCGAACGGACAGCAGGGGTGGCCATCTTTGAAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR GCA 90 bp | CACAGGCCGGATCAGCAGGCACAGGATACATTACTGAATCAACCGAGCCAGCAACATAGTAGGGTGAGCTaGGCTCGTCCACCGCAATAT | + |
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Preference number: 4 (lower is better) Translates to: HRPDQQAQDTLLNQPSQQHSRVS*ARPPQY Trigger: ATATTGCGGTGGACGAGCGCAGCTCACCCTACTATG...TTGCTGGCTCGGTTGATTCAGTAATGTATCCTGTGCCTGCTGATCCGGCCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR CCA 90 bp | TTCCGTCGCCACCACCAATCCAATAAGGCTTCCGTAATCATAGGAAATCAGGTTATGGGCTCAGCCCTCTaGGATCCCCCAGTGAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: FRRHHQSNKASVIIGNQVMGSAL*DPPVRG Trigger: GCCTCTCACTGGGGGATCCCAGAGGGCTGAGCCCAT...AACCTGATTTCCTATGATTACGGAAGCCTTATTGGATTGGTGGTGGCGACGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR CCA 90 bp | CACGAAGATACAGAAATGACTGGACTCTCTTGGTTCTTCTCACGGAAGGAGGGGTGCTGGGAGAATCCTTaGCCGCACTCTAGTGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: HEDTEMTGLSWFFSRKEGCWENP*PHSSGA Trigger: AGCCCCACTAGAGTGCGGCCAAGGATTCTCCCAGCA...CCCCTCCTTCCGTGAGAAGAACCAAGAGAGTCCAGTCATTTCTGTATCTTCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR TCA 90 bp | TGTCCGTTCGAAGGAGCACATGGCGGGATCTATGGGGTGTGGAGAGAGGTAGGCTGTAGGCAATGTTGTTaGAGAAGACTTCCAGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: CPFEGAHGGIYGVWREVGCRQCC*RRLPVP Trigger: AGGAACTGGAAGTCTTCTTCAACAACATTGCCTACA...GCCTACCTCTCTCCACACCCCATAGATCCCGCCATGTGCTCCTTCGAACGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR TCA 90 bp | GATCAGCAGGCACAGGATACATTACTGAATCAACCGAGCCAGCAACCACCCAGGCTCCATGTGACAAGATaGGATCCAGCATCCCATCAC | + |
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Preference number: 4 (lower is better) Translates to: DQQAQDTLLNQPSQQPPRLHVTR*DPASHH Trigger: GTGATGGGATGCTGGATCTCATCTTGTCACATGGAG...CCTGGGTGGTTGCTGGCTCGGTTGATTCAGTAATGTATCCTGTGCCTGCTGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR TCA 90 bp | CAGCAGCACAGGCCGGATCAGCAGGCACAGGATACATTACTGAATCAACCGAGCAGCTTCCATAGGTGTTaGCACATACGGGTTTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: QQHRPDQQAQDTLLNQPSSFHRC*HIRVCL Trigger: GAGACAAACCCGTATGTGTCAACACCTATGGAAGCT...GCTCGGTTGATTCAGTAATGTATCCTGTGCCTGCTGATCCGGCCTGTGCTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR GCA 90 bp | ACAACTAAGGTCCCATCAGTATCTCCCAAACTTCCCTTTTCAAAGATGGCCACCGTCACGGTTGAAATCTaGCAGGGCCACACCTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: TTKVPSVSPKLPFSKMATVTVEI*QGHTSA Trigger: GGCCGAGGTGTGGCCCTGGCAGATTTCAACCGTGAC...GGTGGCCATCTTTGAAAAGGGAAGTTTGGGAGATACTGATGGGACCTTAGTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR CCA 90 bp | GGTGTGGAGAGAGGTAGGCAGCAGGAGAGATATAGTTTTCCACAAAGGTTGTTATCACCTCCACACTGCTaGCTTCATCCCGTCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: GVERGRQQERYSFPQRLLSPPHC*LHPVPG Trigger: GCCTGGGACGGGATGAAGCCAGCAGTGTGGAGGTGA...TAACAACCTTTGTGGAAAACTATATCTCTCCTGCTGCCTACCTCTCTCCACACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR TCA 90 bp | GGTGTGGAGAGAGGTAGGCAGCAGGAGAGATATAGTTTTCCACAAAGGTTGTTACTTTGCCGTCACGGTTaGAATCTGCCAGGGCCACAC | + |
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Preference number: 4 (lower is better) Translates to: GVERGRQQERYSFPQRLLLCRHG*NLPGPH Trigger: GTGTGGCCCTGGCAGATTTCAACCGTGACGGCAAAG...TAACAACCTTTGTGGAAAACTATATCTCTCCTGCTGCCTACCTCTCTCCACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR GCA 90 bp | GAGCCAGCAACCACCCAGGAGCCATCTTTGTCAAGGGCAAAACAAGAAGAAGCTGTGGGCCGTTCCAGTTaGCATAGACGATGTCTACTT | + |
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Preference number: 4 (lower is better) Translates to: EPATTQEPSLSRAKQEEAVGRSS*HRRCLL Trigger: AAGTAGACATCGTCTATGGCAACTGGAACGGCCCAC...AGCTTCTTCTTGTTTTGCCCTTGACAAAGATGGCTCCTGGGTGGTTGCTGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR GCA 90 bp | GCAGCACAGGCCGGATCAGCAGGCACAGGATACATTACTGAATCAACCGAGCCAATTCATTGGTGTCCATaGAATGGCCATTGTCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: AAQAGSAGTGYITESTEPIHWCP*NGHCPA Trigger: AGCAGGACAATGGCCATTGCATGGACACCAATGAAT...TGGCTCGGTTGATTCAGTAATGTATCCTGTGCCTGCTGATCCGGCCTGTGCTGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR GCA 90 bp | CAGGCCGGATCAGCAGGCACAGGATACATTACTGAATCAACCGAGCCAGCAACCCAAATGGGAACTGGATaGATTCATTGGTGTCCATGC | + |
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Preference number: 4 (lower is better) Translates to: QAGSAGTGYITESTEPATQMGTG*IHWCPC Trigger: GCATGGACACCAATGAATGCATCCAGTTCCCATTTG...GGTTGCTGGCTCGGTTGATTCAGTAATGTATCCTGTGCCTGCTGATCCGGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR CCA 90 bp | GCAGCACAGGCCGGATCAGCAGGCACAGGATACATTACTGAATCAACCGAGCCAACTGGATGCATTCATTaGTGTCCATGCAATGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AAQAGSAGTGYITESTEPTGCIH*CPCNGH Trigger: ATGGCCATTGCATGGACACCAATGAATGCATCCAGT...TGGCTCGGTTGATTCAGTAATGTATCCTGTGCCTGCTGATCCGGCCTGTGCTGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR CCA 90 bp | AGGAAATCAGGTTGTACAAAGCAGCAGCAGCAGCACAGGCCGGATCAGCAGGCATCGAGGGCACACAAATaGGAACTGGATGCATTCATT | + |
|
Preference number: 4 (lower is better) Translates to: RKSGCTKQQQQHRPDQQASRAHK*ELDAFI Trigger: AATGAATGCATCCAGTTCCCATTTGTGTGCCCTCGA...TGCCTGCTGATCCGGCCTGTGCTGCTGCTGCTGCTTTGTACAACCTGATTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR CCA 90 bp | GGCAAAGTCCCAGGCCTAGAGAAAGATACGAGGCCTGAGAGAGAGGCTCAGAGAGATTGCATCTTTTATTaGTCCGGCACCTGTAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GKVPGLEKDTRPEREAQRDCIFY*SGTCSF Trigger: GAAGCTACAGGTGCCGGACCAATAAAAGATGCAATC...TCTCTGAGCCTCTCTCTCAGGCCTCGTATCTTTCTCTAGGCCTGGGACTTTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238182.2 |
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| CDS-3UTR TCA 90 bp | CACAGGCCGGATCAGCAGGCACAGGATACATTACTGAATCAACCGAGCCAGCAAAGGCGTTATTGGTGTTaGGAAAGTAGATCTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HRPDQQAQDTLLNQPSQQRRYWC*ESRSPH Trigger: GTGAGGAGATCTACTTTCTCAACACCAATAACGCCT...TTGCTGGCTCGGTTGATTCAGTAATGTATCCTGTGCCTGCTGATCCGGCCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR TCA 90 bp | ACAACTAAGGTCCCATCAGTATCTCCCAAACTTCCCTTTTCAAAGATGGCCACCCTCCACGGGCCACATTaGCGTCATCACTCAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: TTKVPSVSPKLPFSKMATLHGPH*RHHSGC Trigger: ACATCCTGAGTGATGACGTCAATGTGGCCCGTGGAG...GGTGGCCATCTTTGAAAAGGGAAGTTTGGGAGATACTGATGGGACCTTAGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR CCA 90 bp | GCTTCACCAACAACTAAGGTCCCATCAGTATCTCCCAAACTTCCCTTTTCAAAGTGTAGAGTACAACCTTaGCGCCCCTGGCAAAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ASPTTKVPSVSPKLPFSKCRVQP*RPWQRP Trigger: GGGCCTTTGCCAGGGGCGCCAAGGTTGTACTCTACA...CTTTGAAAAGGGAAGTTTGGGAGATACTGATGGGACCTTAGTTGTTGGTGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR CCA 90 bp | GGCAAAGTCCCAGGCCTAGAGAAAGATACGAGGCCTGAGAGAGAGGCTCAGAGACACACAAATGGGAACTaGATGCATTCATTGGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GKVPGLEKDTRPEREAQRHTNGN*MHSLVS Trigger: AGACACCAATGAATGCATCCAGTTCCCATTTGTGTG...TCTCTGAGCCTCTCTCTCAGGCCTCGTATCTTTCTCTAGGCCTGGGACTTTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238182.2 |
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| 3UTR CAA 72 bp | GAATCAACCGAGCCAGCAACCACCCAGGAGCCATCTTaGTCAAGGGCAAAACAAGAAGAAGCTCACGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ESTEPATTQEPS*SRAKQEEAHED Trigger: ATCTTCGTGAGCTTCTTCTTGTTTTGCCCTTGACAAAGATGGCTCCTGGGTGGTTGCTGGCTCGGTTGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR CCA 90 bp | GCTTCACCAACAACTAAGGTCCCATCAGTATCTCCCAAACTTCCCTTTTCAAAGCACGGAAGAGGCGATTaGCTGAGGAGCTTCTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASPTTKVPSVSPKLPFSKHGRGD*LRSFCR Trigger: CCTACAGAAGCTCCTCAGCCAATCGCCTCTTCCGTG...CTTTGAAAAGGGAAGTTTGGGAGATACTGATGGGACCTTAGTTGTTGGTGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR CCA 90 bp | GGTGTGGAGAGAGGTAGGCAGCAGGAGAGATATAGTTTTCCACAAAGGTTGTTAGCGCCCCACTCTTCTTaGTGTAGAGTACAACCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVERGRQQERYSFPQRLLAPHSS*CRVQPW Trigger: CCAAGGTTGTACTCTACACCAAGAAGAGTGGGGCGC...TAACAACCTTTGTGGAAAACTATATCTCTCCTGCTGCCTACCTCTCTCCACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR TCA 90 bp | GCTTCACCAACAACTAAGGTCCCATCAGTATCTCCCAAACTTCCCTTTTCAAAGGAAGAGGCGATTGGCTaGGGAGCTTCTGTAGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ASPTTKVPSVSPKLPFSKEEAIG*GASVGN Trigger: ATTGCCTACAGAAGCTCCTCAGCCAATCGCCTCTTC...CTTTGAAAAGGGAAGTTTGGGAGATACTGATGGGACCTTAGTTGTTGGTGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR TCA 90 bp | GCTTCACCAACAACTAAGGTCCCATCAGTATCTCCCAAACTTCCCTTTTCAAAGAGTGGGGCTGTGTTCTaGAGTTTGTCCTCATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASPTTKVPSVSPKLPFSKSGAVF*SLSSSW Trigger: CCAGGATGAGGACAAACTTCAGAACACAGCCCCACT...CTTTGAAAAGGGAAGTTTGGGAGATACTGATGGGACCTTAGTTGTTGGTGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR CCA 90 bp | CACGAAGATACAGAAATGACTGGACTCTCTTGGTTCTTCTCACGGAAGGAGGGGGATTGCATCTTTTATTaGTCCGGCACCTGTAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HEDTEMTGLSWFFSRKEGDCIFY*SGTCSF Trigger: GAAGCTACAGGTGCCGGACCAATAAAAGATGCAATC...CCCCTCCTTCCGTGAGAAGAACCAAGAGAGTCCAGTCATTTCTGTATCTTCGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR GCA 90 bp | GAGAGAGGTAGGCAGCAGGAGAGATATAGTTTTCCACAAAGGTTGTTAGATTTTTTCGGCTCACCATCTTaGCATCTGGCCACGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: ERGRQQERYSFPQRLLDFFGSPS*HLATSP Trigger: AGGTGACGTGGCCAGATGGCAAGATGGTGAGCCGAA...AAAATCTAACAACCTTTGTGGAAAACTATATCTCTCCTGCTGCCTACCTCTCTC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR CCA 90 bp | GGTGTGGAGAGAGGTAGGCAGCAGGAGAGATATAGTTTTCCACAAAGGTTGTTATTCACCAGCCGATTCTaGGCTCGATTGTACTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GVERGRQQERYSFPQRLLFTSRF*ARLYFR Trigger: TCTGAAGTACAATCGAGCCCAGAATCGGCTGGTGAA...TAACAACCTTTGTGGAAAACTATATCTCTCCTGCTGCCTACCTCTCTCCACACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR CCA 90 bp | AAAGAAAGGCTTCACCAACAACTAAGGTCCCATCAGTATCTCCCAAACTTCCCTACTTGTCTGTGTATGTaGCCACACCTGAGAAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KERLHQQLRSHQYLPNFPTCLCM*PHLRRR Trigger: ACGCCTTCTCAGGTGTGGCCACATACACAGACAAGT...AGGGAAGTTTGGGAGATACTGATGGGACCTTAGTTGTTGGTGAAGCCTTTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR TCA 90 bp | CCTTTATTGATGGGATTTAAAGTGCATATAACTGAAGGCAAAGTCCCAGGCCTAAGTGGGGCTGTGTTCTaGAGTTTGTCCTCATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLLMGFKVHITEGKVPGLSGAVF*SLSSSW Trigger: CCAGGATGAGGACAAACTTCAGAACACAGCCCCACT...TAGGCCTGGGACTTTGCCTTCAGTTATATGCACTTTAAATCCCATCAATAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238182.2 |
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| CDS-3UTR CCA 90 bp | AGAAGAAGCTCACGAAGATACAGAAATGACTGGACTCTCTTGGTTCTTCTCACGCACACAAATGGGAACTaGATGCATTCATTGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRSSRRYRNDWTLLVLLTHTNGN*MHSLVS Trigger: GGACACCAATGAATGCATCCAGTTCCCATTTGTGTG...CGTGAGAAGAACCAAGAGAGTCCAGTCATTTCTGTATCTTCGTGAGCTTCTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR TCA 90 bp | CCTTTATTGATGGGATTTAAAGTGCATATAACTGAAGGCAAAGTCCCAGGCCTAAGCTTCCATAGGTGTTaGCACATACGGGTTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLLMGFKVHITEGKVPGLSFHRC*HIRVCL Trigger: GAGACAAACCCGTATGTGTCAACACCTATGGAAGCT...TAGGCCTGGGACTTTGCCTTCAGTTATATGCACTTTAAATCCCATCAATAAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238182.2 |
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| CDS-3UTR TCA 90 bp | ACAACTAAGGTCCCATCAGTATCTCCCAAACTTCCCTTTTCAAAGATGGCCACCGGTTATTTCGGAATTTaGACAACTTGTCTGTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: TTKVPSVSPKLPFSKMATGYFGI*TTCLCM Trigger: CATACACAGACAAGTTGTTCAAATTCCGAAATAACC...GGTGGCCATCTTTGAAAAGGGAAGTTTGGGAGATACTGATGGGACCTTAGTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR CCA 90 bp | CCTTTATTGATGGGATTTAAAGTGCATATAACTGAAGGCAAAGTCCCAGGCCTATCGAGGGCACACAAATaGGAACTGGATGCATTCATT | + |
|
Preference number: 4 (lower is better) Translates to: PLLMGFKVHITEGKVPGLSRAHK*ELDAFI Trigger: AATGAATGCATCCAGTTCCCATTTGTGTGCCCTCGA...TAGGCCTGGGACTTTGCCTTCAGTTATATGCACTTTAAATCCCATCAATAAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238182.2 |
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| CDS CCA 90 bp | GGCAGGACTGAGTTGGTGACTGCAGTGAACATGGGCTCAGCCCTCTaGGATCCCCCAGTGAGAGGCAGAAGCCACAGGGGCGGCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GRTELVTAVNMGSAL*DPPVRGRSHRGGSR Trigger: CCTGCTGCCGCCCCTGTGGCTTCTGCCTCTCACTGGGGGATCCCAGAGGGCTGAGCCCATGTTCACTGCAGTCACCAACTCAGTCCTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS-3UTR CAA 90 bp | TGTCCGTTCGAAGGAGCACATGGCGGGATCTATGGGGTGTGGAGAGAGGTAGGCCGGCCCGCTGTGTACTaGCTGACCCCAGCCTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CPFEGAHGGIYGVWREVGRPAVY*LTPASA Trigger: GGCTGAGGCTGGGGTCAGCAAGTACACAGCGGGCCG...GCCTACCTCTCTCCACACCCCATAGATCCCGCCATGTGCTCCTTCGAACGGACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS TCA 90 bp | GACCCCGATGGCGTTCCCCTGACGGTCCCTCAGAGCATAGTAGGGTaGGCTGCGCTCGTCCACCGCAATATTCACCAGCCGATTCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: DPDGVPLTVPQSIVG*AALVHRNIHQPILG Trigger: GCCCAGAATCGGCTGGTGAATATTGCGGTGGACGAGCGCAGCTCACCCTACTATGCTCTGAGGGACCGTCAGGGGAACGCCATCGGGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS CCA 90 bp | GTTCATCTCCTCGCTGGCCACACTTCGGCTCACCATCTTGCCATCTaGCCACGTCACCTCCACACTGCTGGCTTCATCCCGTCCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VHLLAGHTSAHHLAI*PRHLHTAGFIPSQA Trigger: GGCCTGGGACGGGATGAAGCCAGCAGTGTGGAGGTGACGTGGCCAGATGGCAAGATGGTGAGCCGAAGTGTGGCCAGCGAGGAGATGAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS CCA 90 bp | GGGCCACACCTCGGCCATGCTGATGAGGGTCGTCTACGCCGGCACTaGCCGCAGTATCCACAAAGGTACCGTTGCCTTGGTTGTGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GPHLGHADEGRLRRH*PQYPQRYRCLGCGR Trigger: TCTTCCACAACCAAGGCAACGGTACCTTTGTGGATACTGCGGCCAGTGCCGGCGTAGACGACCCTCATCAGCATGGCCGAGGTGTGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS GCA 90 bp | CGATGGCGTTCCCCTGACGGTCCCTCAGAGCATAGTAGGGTGAGCTaGGCTCGTCCACCGCAATATTCACCAGCCGATTCTGGGCTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: RWRSPDGPSEHSRVS*ARPPQYSPADSGLD Trigger: ATCGAGCCCAGAATCGGCTGGTGAATATTGCGGTGGACGAGCGCAGCTCACCCTACTATGCTCTGAGGGACCGTCAGGGGAACGCCATCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS GCA 90 bp | ACACCGAGTTCATCTCCTCGCTGGCCACACTTCGGCTCACCATCTTaGCATCTGGCCACGTCACCTCCACACTGCTGGCTTCATCCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: TPSSSPRWPHFGSPS*HLATSPPHCWLHPV Trigger: GACGGGATGAAGCCAGCAGTGTGGAGGTGACGTGGCCAGATGGCAAGATGGTGAGCCGAAGTGTGGCCAGCGAGGAGATGAACTCGGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS TCA 90 bp | GTGGAAGAGGAAGTTGGGCCCGTTCTCGTTGTCACAGAAGATATCTaGGGCACTGCTGCTGAGAATGGGGCCTACGCTGACACCCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VEEEVGPVLVVTEDI*GTAAENGAYADTPA Trigger: GGCCGGGGTGTCAGCGTAGGCCCCATTCTCAGCAGCAGTGCCTCAGATATCTTCTGTGACAACGAGAACGGGCCCAACTTCCTCTTCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS CCA 90 bp | CATCCTGGGGGTAGAGGATCTCCAACACCGAGTTCATCTCCTCGCTaGCCACACTTCGGCTCACCATCTTGCCATCTGGCCACGTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: HPGGRGSPTPSSSPR*PHFGSPSCHLATSP Trigger: AGGTGACGTGGCCAGATGGCAAGATGGTGAGCCGAAGTGTGGCCAGCGAGGAGATGAACTCGGTGTTGGAGATCCTCTACCCCCAGGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS TCA 90 bp | CCACGGAGCGTCCCGCAAAGAGGCTGGCCACTCCACGGGCCACATTaGCGTCATCACTCAGGATGTCTTCCCACCGGTTATTTCGGAATT | + |
|
Preference number: 5 (lower is better) Translates to: PRSVPQRGWPLHGPH*RHHSGCLPTGYFGI Trigger: AATTCCGAAATAACCGGTGGGAAGACATCCTGAGTGATGACGTCAATGTGGCCCGTGGAGTGGCCAGCCTCTTTGCGGGACGCTCCGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS-3UTR CAA 90 bp | CAGCAGCACAGGCCGGATCAGCAGGCACAGGATACATTACTGAATCAACCGAGCCTTCGGCTCACCATCTaGCCATCTGGCCACGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: QQHRPDQQAQDTLLNQPSLRLTI*PSGHVT Trigger: GGTGACGTGGCCAGATGGCAAGATGGTGAGCCGAAG...GCTCGGTTGATTCAGTAATGTATCCTGTGCCTGCTGATCCGGCCTGTGCTGCTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS CCA 90 bp | TCTACGCCGGCACTGGCCGCAGTATCCACAAAGGTACCGTTGCCTTaGTTGTGGAAGAGGAAGTTGGGCCCGTTCTCGTTGTCACAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: STPALAAVSTKVPLP*LWKRKLGPFSLSQK Trigger: CTTCTGTGACAACGAGAACGGGCCCAACTTCCTCTTCCACAACCAAGGCAACGGTACCTTTGTGGATACTGCGGCCAGTGCCGGCGTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS-3UTR CAA 90 bp | AAAGATGGCCACCCCTGCTGTCCGTTCGAAGGAGCACATGGCGGGATCTATGGGTCCATGCAATGGCCATaGTCCTGCTGGGAGAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: KDGHPCCPFEGAHGGIYGSMQWP*SCWENP Trigger: AGGATTCTCCCAGCAGGACAATGGCCATTGCATGGA...CCCATAGATCCCGCCATGTGCTCCTTCGAACGGACAGCAGGGGTGGCCATCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS TCA 90 bp | AGGGTCCCCGTGCTCCCTGCGGATGACACGGAAGAGGCGATTGGCTaGGGAGCTTCTGTAGGCAATGTTGTTGAAGAAGACTTCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RVPVLPADDTEEAIG*GASVGNVVEEDFQF Trigger: GAACTGGAAGTCTTCTTCAACAACATTGCCTACAGAAGCTCCTCAGCCAATCGCCTCTTCCGTGTCATCCGCAGGGAGCACGGGGACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS TCA 90 bp | GGAAGACAGACAGTGGCTGAGCCATGGACTCTCCATGTGACAAGATaGGATCCAGCATCCCATCACCATCGAAGTCGGTCACTACGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GRQTVAEPWTLHVTR*DPASHHHRSRSLRP Trigger: GGGGCGTAGTGACCGACTTCGATGGTGATGGGATGCTGGATCTCATCTTGTCACATGGAGAGTCCATGGCTCAGCCACTGTCTGTCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS TCA 90 bp | GTGCCACAGGCTCCATTTCACACAGGTAGCCGGAACCCCCATCAATaGTCCGTAGGTGCGCCCCACTCTTCTTGGTGTAGAGTACAACCT | + |
|
Preference number: 5 (lower is better) Translates to: VPQAPFHTGSRNPHQ*SVGAPHSSWCRVQP Trigger: AGGTTGTACTCTACACCAAGAAGAGTGGGGCGCACCTACGGATCATTGATGGGGGTTCCGGCTACCTGTGTGAAATGGAGCCTGTGGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS GCA 90 bp | CGCCACAACGATCTCGAAGTCCCCATCATGGTCCACATCTGTCACTaGCACTCCATAGTTGAGCTGGGTGGGGTTGCTGTCATAGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RHNDLEVPIMVHICH*HSIVELGGVAVIVR Trigger: CCTGACTATGACAGCAACCCCACCCAGCTCAACTATGGAGTGGCAGTGACAGATGTGGACCATGATGGGGACTTCGAGATCGTTGTGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS-3UTR CAA 90 bp | GCAGCACAGGCCGGATCAGCAGGCACAGGATACATTACTGAATCAACCGAGCCAACTCCACGGGCCACATaGACGTCATCACTCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: AAQAGSAGTGYITESTEPTPRAT*TSSLRM Trigger: CATCCTGAGTGATGACGTCAATGTGGCCCGTGGAGT...TGGCTCGGTTGATTCAGTAATGTATCCTGTGCCTGCTGATCCGGCCTGTGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS CCA 90 bp | CCGGCACTGGCCGCAGTATCCACAAAGGTACCGTTGCCTTGGTTGTaGAAGAGGAAGTTGGGCCCGTTCTCGTTGTCACAGAAGATATCT | + |
|
Preference number: 5 (lower is better) Translates to: PALAAVSTKVPLPWL*KRKLGPFSLSQKIS Trigger: AGATATCTTCTGTGACAACGAGAACGGGCCCAACTTCCTCTTCCACAACCAAGGCAACGGTACCTTTGTGGATACTGCGGCCAGTGCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS TCA 90 bp | ATTTCCCCGGAAGACAGACAGTGGCTGAGCCATGGACTCTCCATGTaGCAAGATGAGATCCAGCATCCCATCACCATCGAAGTCGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: ISPEDRQWLSHGLSM*QDEIQHPITIEVGH Trigger: GTGACCGACTTCGATGGTGATGGGATGCTGGATCTCATCTTGTCACATGGAGAGTCCATGGCTCAGCCACTGTCTGTCTTCCGGGGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS-3UTR CAA 90 bp | AGGAAATCAGGTTGTACAAAGCAGCAGCAGCAGCACAGGCCGGATCAGCAGGCATCCAGTTCCTGGTCATaGTCAAAGTCGGCAGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: RKSGCTKQQQQHRPDQQASSSWS*SKSAAM Trigger: CATTGCTGCCGACTTTGACAATGACCAGGAACTGGA...TGCCTGCTGATCCGGCCTGTGCTGCTGCTGCTGCTTTGTACAACCTGATTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
||
| CDS-3UTR CAA 90 bp | GGCAAAGTCCCAGGCCTAGAGAAAGATACGAGGCCTGAGAGAGAGGCTCAGAGAAACTGGATGCATTCATaGGTGTCTCTAGTGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GKVPGLEKDTRPEREAQRNWMHS*VSLVGL Trigger: CAGCCCCACTAGAGACACCAATGAATGCATCCAGTT...TCTCTGAGCCTCTCTCTCAGGCCTCGTATCTTTCTCTAGGCCTGGGACTTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238182.2 |
||
| CDS TCA 90 bp | ACTTGTCTGTGTATGTGGCCACACCTGAGAAGGCGTTATTGGTGTTaGGAAAGTAGATCTCCTCACGGCCGTCCCCATCGATGTCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: TCLCMWPHLRRRYWC*ESRSPHGRPHRCHR Trigger: CCTGTGACATCGATGGGGACGGCCGTGAGGAGATCTACTTTCTCAACACCAATAACGCCTTCTCAGGTGTGGCCACATACACAGACAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
||
| CDS CCA 90 bp | CAGTATCCACAAAGGTACCGTTGCCTTGGTTGTGGAAGAGGAAGTTaGGCCCGTTCTCGTTGTCACAGAAGATATCTGAGGCACTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QYPQRYRCLGCGRGS*ARSRCHRRYLRHCC Trigger: GCAGCAGTGCCTCAGATATCTTCTGTGACAACGAGAACGGGCCCAACTTCCTCTTCCACAACCAAGGCAACGGTACCTTTGTGGATACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS-3UTR CAA 90 bp | ACAACTAAGGTCCCATCAGTATCTCCCAAACTTCCCTTTTCAAAGATGGCCACCAGGGCGTCACCAGGATaGAGCTCCTCGATGAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TTKVPSVSPKLPFSKMATRASPG*SSSMRG Trigger: CCCTCTCATCGAGGAGCTCAATCCTGGTGACGCCCT...GGTGGCCATCTTTGAAAAGGGAAGTTTGGGAGATACTGATGGGACCTTAGTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR CAA 90 bp | GCTTCACCAACAACTAAGGTCCCATCAGTATCTCCCAAACTTCCCTTTTCAAAGGAGGGCGTGGAGAACTaGGGCGAAGCAATGTCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: ASPTTKVPSVSPKLPFSKEGVEN*GEAMSR Trigger: TCGGGACATTGCTTCGCCCAAGTTCTCCACGCCCTC...CTTTGAAAAGGGAAGTTTGGGAGATACTGATGGGACCTTAGTTGTTGGTGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS TCA 90 bp | CACGGAAGAGGCGATTGGCTGAGGAGCTTCTGTAGGCAATGTTGTTaGAGAAGACTTCCAGTTCCTGGTCATTGTCAAAGTCGGCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: HGRGDWLRSFCRQCC*RRLPVPGHCQSRQQ Trigger: TTGCTGCCGACTTTGACAATGACCAGGAACTGGAAGTCTTCTTCAACAACATTGCCTACAGAAGCTCCTCAGCCAATCGCCTCTTCCGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS CCA 90 bp | TCCATAGGTGTTGACACATACGGGTTTGTCTCGAGGGCACACAAATaGGAACTGGATGCATTCATTGGTGTCTCTAGTGGGGCTGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SIGVDTYGFVSRAHK*ELDAFIGVSSGAVF Trigger: GAACACAGCCCCACTAGAGACACCAATGAATGCATCCAGTTCCCATTTGTGTGCCCTCGAGACAAACCCGTATGTGTCAACACCTATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238182.2 |
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| CDS-3UTR CAA 90 bp | GAGAGAGGTAGGCAGCAGGAGAGATATAGTTTTCCACAAAGGTTGTTAGATTTTTACTTCAGAACCAGGTaGGGGCCGGTGTACCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: ERGRQQERYSFPQRLLDFYFRTR*GPVYPA Trigger: GGCGGGGTACACCGGCCCCAACCTGGTTCTGAAGTA...AAAATCTAACAACCTTTGTGGAAAACTATATCTCTCCTGCTGCCTACCTCTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR CAA 90 bp | GAGCCAGCAACCACCCAGGAGCCATCTTTGTCAAGGGCAAAACAAGAAGAAGCTAACTGGATGCATTCATaGGTGTCCATGCAATGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: EPATTQEPSLSRAKQEEANWMHS*VSMQWP Trigger: TGGCCATTGCATGGACACCAATGAATGCATCCAGTT...AGCTTCTTCTTGTTTTGCCCTTGACAAAGATGGCTCCTGGGTGGTTGCTGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
||
| CDS TCA 90 bp | GATTGCATCTTTTATTGGTCCGGCACCTGTAGCTTCCATAGGTGTTaGCACATACGGGTTTGTCTCGAGGGCACACAAATGGGAACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: DCIFYWSGTCSFHRC*HIRVCLEGTQMGTG Trigger: TCCAGTTCCCATTTGTGTGCCCTCGAGACAAACCCGTATGTGTCAACACCTATGGAAGCTACAGGTGCCGGACCAATAAAAGATGCAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048630.8 ENSMUST00000238182.2 ENSMUST00000238290.2 |
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| CDS CCA 90 bp | TCCATAGGTGTTGACACATACGGGTTTGTCTCGAGGGCACACAAATaGGAACTGGATGCATTCATTGGTGTCCATGCAATGGCCATTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SIGVDTYGFVSRAHK*ELDAFIGVHAMAIV Trigger: GACAATGGCCATTGCATGGACACCAATGAATGCATCCAGTTCCCATTTGTGTGCCCTCGAGACAAACCCGTATGTGTCAACACCTATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS CCA 90 bp | GTGTTGACACATACGGGTTTGTCTCGAGGGCACACAAATGGGAACTaGATGCATTCATTGGTGTCTCTAGTGGGGCTGTGTTCTGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: VLTHTGLSRGHTNGN*MHSLVSLVGLCSEV Trigger: AACTTCAGAACACAGCCCCACTAGAGACACCAATGAATGCATCCAGTTCCCATTTGTGTGCCCTCGAGACAAACCCGTATGTGTCAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238182.2 |
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| CDS-3UTR CAA 90 bp | TTTGTCAAGGGCAAAACAAGAAGAAGCTCACGAAGATACAGAAATGACTGGACTGTACCGTTGCCTTGGTaGTGGAAGAGGAAGTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: FVKGKTRRSSRRYRNDWTVPLPW*WKRKLG Trigger: GCCCAACTTCCTCTTCCACAACCAAGGCAACGGTAC...AGTCCAGTCATTTCTGTATCTTCGTGAGCTTCTTCTTGTTTTGCCCTTGACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
||
| CDS-3UTR CAA 90 bp | TTCCGTCGCCACCACCAATCCAATAAGGCTTCCGTAATCATAGGAAATCAGGTTAAAGGTACCGTTGCCTaGGTTGTGGAAGAGGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: FRRHHQSNKASVIIGNQVKGTVA*VVEEEV Trigger: AACTTCCTCTTCCACAACCAAGGCAACGGTACCTTT...AACCTGATTTCCTATGATTACGGAAGCCTTATTGGATTGGTGGTGGCGACGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
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| CDS-3UTR CAA 90 bp | TTCCGTCGCCACCACCAATCCAATAAGGCTTCCGTAATCATAGGAAATCAGGTTTTGACACATACGGGTTaGTCTCGAGGGCACACAAAT | + |
|
Preference number: 5 (lower is better) Translates to: FRRHHQSNKASVIIGNQVLTHTG*SRGHTN Trigger: ATTTGTGTGCCCTCGAGACAAACCCGTATGTGTCAA...AACCTGATTTCCTATGATTACGGAAGCCTTATTGGATTGGTGGTGGCGACGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
||
| CDS-3UTR CAA 90 bp | CAACCACCCAGGAGCCATCTTTGTCAAGGGCAAAACAAGAAGAAGCTCACGAAGCGGTTATTTCGGAATTaGAACAACTTGTCTGTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: QPPRSHLCQGQNKKKLTKRLFRN*NNLSVY Trigger: ATACACAGACAAGTTGTTCAAATTCCGAAATAACCG...CTTCGTGAGCTTCTTCTTGTTTTGCCCTTGACAAAGATGGCTCCTGGGTGGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
||
| CDS-3UTR CAA 90 bp | TTTGTCAAGGGCAAAACAAGAAGAAGCTCACGAAGATACAGAAATGACTGGACTTTGGGCCCGTTCTCGTaGTCACAGAAGATATCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FVKGKTRRSSRRYRNDWTLGPFS*SQKISE Trigger: CTCAGATATCTTCTGTGACAACGAGAACGGGCCCAA...AGTCCAGTCATTTCTGTATCTTCGTGAGCTTCTTCTTGTTTTGCCCTTGACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
||
| CDS-3UTR CAA 90 bp | CCTTTATTGATGGGATTTAAAGTGCATATAACTGAAGGCAAAGTCCCAGGCCTATTGACACATACGGGTTaGTCTCGAGGGCACACAAAT | + |
|
Preference number: 5 (lower is better) Translates to: PLLMGFKVHITEGKVPGLLTHTG*SRGHTN Trigger: ATTTGTGTGCCCTCGAGACAAACCCGTATGTGTCAA...TAGGCCTGGGACTTTGCCTTCAGTTATATGCACTTTAAATCCCATCAATAAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238182.2 |
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| CDS GCA 72 bp | CTTGCTGACCCCAGCCTCAGCCGCCACGTCCCTGAGTaGCAGGATCCCCCGGGACAGGTCACTGGCCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LADPSLSRHVPE*QDPPGQVTGLR Trigger: CCTGAGGCCAGTGACCTGTCCCGGGGGATCCTGGCACTCAGGGACGTGGCGGCTGAGGCTGGGGTCAGCAAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS CAA 72 bp | GTACCCCGGCCCTCAGGCTCTAGGGCGTCACCAGGATaGAGCTCCTCGATGAGAGGGTCCCCGTGCTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: VPRPSGSRASPG*SSSMRGSPCSL Trigger: CAGGGAGCACGGGGACCCTCTCATCGAGGAGCTCAATCCTGGTGACGCCCTAGAGCCTGAGGGCCGGGGTAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS TCA 72 bp | GGCGTTCCCCTGACGGTCCCTCAGAGCATAGTAGGGTaGGCTGCGCTCGTCCACCGCAATATTCACCAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: GVPLTVPQSIVG*AALVHRNIHQP Trigger: CGGCTGGTGAATATTGCGGTGGACGAGCGCAGCTCACCCTACTATGCTCTGAGGGACCGTCAGGGGAACGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS GCA 72 bp | GGCCCGGTGACTGGCCGAGAGTCCCCACACAGGCTGTaGCGTCTTCATTGGGTTCATAGCCCCGATTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: GPVTGRESPHRL*RLHWVHSPDCI Trigger: GATGCAATCGGGGCTATGAACCCAATGAAGACGGCACAGCCTGTGTGGGGACTCTCGGCCAGTCACCGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238290.2 |
||
| CDS CCA 72 bp | GAGTTGGTGACTGCAGTGAACATGGGCTCAGCCCTCTaGGATCCCCCAGTGAGAGGCAGAAGCCACAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ELVTAVNMGSAL*DPPVRGRSHRG Trigger: GCCCCTGTGGCTTCTGCCTCTCACTGGGGGATCCCAGAGGGCTGAGCCCATGTTCACTGCAGTCACCAACTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS GCA 72 bp | TCACCAGGATTGAGCTCCTCGATGAGAGGGTCCCCGTaGTCCCTGCGGATGACACGGAAGAGGCGATTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SPGLSSSMRGSP*SLRMTRKRRLA Trigger: AGCCAATCGCCTCTTCCGTGTCATCCGCAGGGAGCACGGGGACCCTCTCATCGAGGAGCTCAATCCTGGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS CCA 72 bp | CACTCTTCTTGGTGTAGAGTACAACCTTGGCGCCCCTaGCAAAGGCCCCGAACCGGGTGCGAGGTACCACAC | + |
|
Preference number: 6 (lower is better) Translates to: HSSWCRVQPWRP*QRPRTGCEVPH Trigger: GTGTGGTACCTCGCACCCGGTTCGGGGCCTTTGCCAGGGGCGCCAAGGTTGTACTCTACACCAAGAAGAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS CAA 72 bp | CGTCCCGCAAAGAGGCTGGCCACTCCACGGGCCACATaGACGTCATCACTCAGGATGTCTTCCCACCGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: RPAKRLATPRAT*TSSLRMSSHRL Trigger: TAACCGGTGGGAAGACATCCTGAGTGATGACGTCAATGTGGCCCGTGGAGTGGCCAGCCTCTTTGCGGGACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS CAA 72 bp | TTCATCTCCTCGCTGGCCACACTTCGGCTCACCATCTaGCCATCTGGCCACGTCACCTCCACACTGCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: FISSLATLRLTI*PSGHVTSTLLA Trigger: AGCCAGCAGTGTGGAGGTGACGTGGCCAGATGGCAAGATGGTGAGCCGAAGTGTGGCCAGCGAGGAGATGAA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS CAA 90 bp | GCCACGGAGCGTCCCGCAAAGAGGCTGGCCACTCCACGGGCCACATaGACGTCATCACTCAGGATGTCTTCCCACCGGTTATTTCGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: ATERPAKRLATPRAT*TSSLRMSSHRLFRN Trigger: ATTCCGAAATAACCGGTGGGAAGACATCCTGAGTGATGACGTCAATGTGGCCCGTGGAGTGGCCAGCCTCTTTGCGGGACGCTCCGTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS CAA 90 bp | GGGTCGTCTACGCCGGCACTGGCCGCAGTATCCACAAAGGTACCGTaGCCTTGGTTGTGGAAGAGGAAGTTGGGCCCGTTCTCGTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: GSSTPALAAVSTKVP*PWLWKRKLGPFSLS Trigger: TGACAACGAGAACGGGCCCAACTTCCTCTTCCACAACCAAGGCAACGGTACCTTTGTGGATACTGCGGCCAGTGCCGGCGTAGACGACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS CAA 90 bp | AACACCGAGTTCATCTCCTCGCTGGCCACACTTCGGCTCACCATCTaGCCATCTGGCCACGTCACCTCCACACTGCTGGCTTCATCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: NTEFISSLATLRLTI*PSGHVTSTLLASSR Trigger: ACGGGATGAAGCCAGCAGTGTGGAGGTGACGTGGCCAGATGGCAAGATGGTGAGCCGAAGTGTGGCCAGCGAGGAGATGAACTCGGTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS TCA 72 bp | GTCCCGCAAAGAGGCTGGCCACTCCACGGGCCACATTaGCGTCATCACTCAGGATGTCTTCCCACCGGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: VPQRGWPLHGPH*RHHSGCLPTGY Trigger: ATAACCGGTGGGAAGACATCCTGAGTGATGACGTCAATGTGGCCCGTGGAGTGGCCAGCCTCTTTGCGGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS GCA 72 bp | TCCCCTGACGGTCCCTCAGAGCATAGTAGGGTGAGCTaGGCTCGTCCACCGCAATATTCACCAGCCGATTCT | + |
|
Preference number: 6 (lower is better) Translates to: SPDGPSEHSRVS*ARPPQYSPADS Trigger: AGAATCGGCTGGTGAATATTGCGGTGGACGAGCGCAGCTCACCCTACTATGCTCTGAGGGACCGTCAGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS GCA 72 bp | CACACTGCTGGCTTCATCCCGTCCCAGGCCAAAATGTaGCACAGGCTCCATTTCACACAGGTAGCCGGAACC | + |
|
Preference number: 6 (lower is better) Translates to: HTAGFIPSQAKM*HRLHFTQVAGT Trigger: GGTTCCGGCTACCTGTGTGAAATGGAGCCTGTGGCACATTTTGGCCTGGGACGGGATGAAGCCAGCAGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS CCA 72 bp | GCCGATTCTGGGCTCGATTGTACTTCAGAACCAGGTTaGGGCCGGTGTACCCCGCCACAACGATCTCGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: ADSGLDCTSEPG*GRCTPPQRSRS Trigger: ACTTCGAGATCGTTGTGGCGGGGTACACCGGCCCCAACCTGGTTCTGAAGTACAATCGAGCCCAGAATCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS CCA 72 bp | CTGCGCTCGTCCACCGCAATATTCACCAGCCGATTCTaGGCTCGATTGTACTTCAGAACCAGGTTGGGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LRSSTAIFTSRF*ARLYFRTRLGP Trigger: CGGCCCCAACCTGGTTCTGAAGTACAATCGAGCCCAGAATCGGCTGGTGAATATTGCGGTGGACGAGCGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS CCA 72 bp | GGTAGAGGATCTCCAACACCGAGTTCATCTCCTCGCTaGCCACACTTCGGCTCACCATCTTGCCATCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GRGSPTPSSSPR*PHFGSPSCHLA Trigger: GGCCAGATGGCAAGATGGTGAGCCGAAGTGTGGCCAGCGAGGAGATGAACTCGGTGTTGGAGATCCTCTACC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS TCA 72 bp | CTTCCAGTTCCTGGTCATTGTCAAAGTCGGCAGCAATaGCAGTCCGGACAGGGGAGGGCGTGGAGAACTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LPVPGHCQSRQQ*QSGQGRAWRTW Trigger: CCAAGTTCTCCACGCCCTCCCCTGTCCGGACTGTCATTGCTGCCGACTTTGACAATGACCAGGAACTGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS CCA 72 bp | GCACTGGCCGCAGTATCCACAAAGGTACCGTTGCCTTaGTTGTGGAAGAGGAAGTTGGGCCCGTTCTCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: ALAAVSTKVPLP*LWKRKLGPFSL Trigger: CAACGAGAACGGGCCCAACTTCCTCTTCCACAACCAAGGCAACGGTACCTTTGTGGATACTGCGGCCAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS CAA 90 bp | ACGCCGGCACTGGCCGCAGTATCCACAAAGGTACCGTTGCCTTGGTaGTGGAAGAGGAAGTTGGGCCCGTTCTCGTTGTCACAGAAGATA | + |
|
Preference number: 6 (lower is better) Translates to: TPALAAVSTKVPLPW*WKRKLGPFSLSQKI Trigger: TATCTTCTGTGACAACGAGAACGGGCCCAACTTCCTCTTCCACAACCAAGGCAACGGTACCTTTGTGGATACTGCGGCCAGTGCCGGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS TCA 72 bp | CATCATGGTCCACATCTGTCACTGCCACTCCATAGTTaGGCTGGGTGGGGTTGCTGTCATAGTCAGGGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: HHGPHLSLPLHS*AGWGCCHSQGA Trigger: TGCCCCCTGACTATGACAGCAACCCCACCCAGCTCAACTATGGAGTGGCAGTGACAGATGTGGACCATGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS TCA 72 bp | GAAGTTGGGCCCGTTCTCGTTGTCACAGAAGATATCTaGGGCACTGCTGCTGAGAATGGGGCCTACGCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: EVGPVLVVTEDI*GTAAENGAYAD Trigger: GTCAGCGTAGGCCCCATTCTCAGCAGCAGTGCCTCAGATATCTTCTGTGACAACGAGAACGGGCCCAACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS TCA 72 bp | GCTCCATTTCACACAGGTAGCCGGAACCCCCATCAATaGTCCGTAGGTGCGCCCCACTCTTCTTGGTGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: APFHTGSRNPHQ*SVGAPHSSWCR Trigger: TCTACACCAAGAAGAGTGGGGCGCACCTACGGATCATTGATGGGGGTTCCGGCTACCTGTGTGAAATGGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS GCA 72 bp | GATCTCGAAGTCCCCATCATGGTCCACATCTGTCACTaGCACTCCATAGTTGAGCTGGGTGGGGTTGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: DLEVPIMVHICH*HSIVELGGVAV Trigger: GACAGCAACCCCACCCAGCTCAACTATGGAGTGGCAGTGACAGATGTGGACCATGATGGGGACTTCGAGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS TCA 72 bp | AGTTGCCATAGACGATGTCTACTTTGCCGTCACGGTTaGAATCTGCCAGGGCCACACCTCGGCCATGCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: SCHRRCLLCRHG*NLPGPHLGHAD Trigger: ATCAGCATGGCCGAGGTGTGGCCCTGGCAGATTTCAACCGTGACGGCAAAGTAGACATCGTCTATGGCAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
||
| CDS GCA 72 bp | ATGCATTCATTGGTGTCCATGCAATGGCCATTGTCCTaGTGGGAGAATCCTTGGCCGCACTCTAGTGGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: MHSLVSMQWPLS*WENPWPHSSGA Trigger: AGCCCCACTAGAGTGCGGCCAAGGATTCTCCCAGCAGGACAATGGCCATTGCATGGACACCAATGAATGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS GCA 72 bp | ACCCACCTAAAAAGGCCACTTGAGCCACACAGGCTGTaGCGTCTTCATTGGGTTCATAGCCCCGATTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: THLKRPLEPHRL*RLHWVHSPDCI Trigger: GATGCAATCGGGGCTATGAACCCAATGAAGACGGCACAGCCTGTGTGGCTCAAGTGGCCTTTTTAGGTGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048630.8 |
||
| CDS TCA 72 bp | TGTATGTGGCCACACCTGAGAAGGCGTTATTGGTGTTaGGAAAGTAGATCTCCTCACGGCCGTCCCCATCGA | + |
|
Preference number: 6 (lower is better) Translates to: CMWPHLRRRYWC*ESRSPHGRPHR Trigger: TCGATGGGGACGGCCGTGAGGAGATCTACTTTCTCAACACCAATAACGCCTTCTCAGGTGTGGCCACATACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
||
| CDS TCA 72 bp | ACAGTGGCTGAGCCATGGACTCTCCATGTGACAAGATaGGATCCAGCATCCCATCACCATCGAAGTCGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: TVAEPWTLHVTR*DPASHHHRSRS Trigger: TGACCGACTTCGATGGTGATGGGATGCTGGATCTCATCTTGTCACATGGAGAGTCCATGGCTCAGCCACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
||
| CDS CCA 72 bp | AGGCCACTTGAGCCACACAGGCTGTGCCGTCTTCATTaGGTTCATAGCCCCGATTGCATCTTTTATTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RPLEPHRLCRLH*VHSPDCIFYWS Trigger: GGACCAATAAAAGATGCAATCGGGGCTATGAACCCAATGAAGACGGCACAGCCTGTGTGGCTCAAGTGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238182.2 |
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| CDS CAA 90 bp | GCAGTATCCACAAAGGTACCGTTGCCTTGGTTGTGGAAGAGGAAGTaGGGCCCGTTCTCGTTGTCACAGAAGATATCTGAGGCACTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AVSTKVPLPWLWKRK*GPFSLSQKISEALL Trigger: CAGCAGTGCCTCAGATATCTTCTGTGACAACGAGAACGGGCCCAACTTCCTCTTCCACAACCAAGGCAACGGTACCTTTGTGGATACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
||
| CDS TCA 72 bp | GAAGACAGACAGTGGCTGAGCCATGGACTCTCCATGTaGCAAGATGAGATCCAGCATCCCATCACCATCGAA | + |
|
Preference number: 6 (lower is better) Translates to: EDRQWLSHGLSM*QDEIQHPITIE Trigger: TTCGATGGTGATGGGATGCTGGATCTCATCTTGTCACATGGAGAGTCCATGGCTCAGCCACTGTCTGTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
||
| CDS GCA 72 bp | CGGGTTTGTCTCGAGGGCACACAAATGGGAACTGGATaGATTCATTGGTGTCCATGCAATGGCCATTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: RVCLEGTQMGTG*IHWCPCNGHCP Trigger: AGGACAATGGCCATTGCATGGACACCAATGAATGCATCCAGTTCCCATTTGTGTGCCCTCGAGACAAACCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS GCA 72 bp | AGGCTGTGCCGTCTTCATTGGGTTCATAGCCCCGATTaGATCTTTTATTGGTCCGGCACCTGTAGCTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: RLCRLHWVHSPD*IFYWSGTCSFH Trigger: ATGGAAGCTACAGGTGCCGGACCAATAAAAGATGCAATCGGGGCTATGAACCCAATGAAGACGGCACAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048630.8 ENSMUST00000238182.2 ENSMUST00000238290.2 |
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| CDS CCA 72 bp | CAAAGGTACCGTTGCCTTGGTTGTGGAAGAGGAAGTTaGGCCCGTTCTCGTTGTCACAGAAGATATCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: QRYRCLGCGRGS*ARSRCHRRYLR Trigger: CCTCAGATATCTTCTGTGACAACGAGAACGGGCCCAACTTCCTCTTCCACAACCAAGGCAACGGTACCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS CCA 72 bp | CATACGGGTTTGTCTCGAGGGCACACAAATGGGAACTaGATGCATTCATTGGTGTCTCTAGTGGGGCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: HTGLSRGHTNGN*MHSLVSLVGLC Trigger: ACACAGCCCCACTAGAGACACCAATGAATGCATCCAGTTCCCATTTGTGTGCCCTCGAGACAAACCCGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238182.2 |
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| CDS CCA 72 bp | CATACGGGTTTGTCTCGAGGGCACACAAATGGGAACTaGATGCATTCATTGGTGTCCATGCAATGGCCATTG | + |
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Preference number: 6 (lower is better) Translates to: HTGLSRGHTNGN*MHSLVSMQWPL Trigger: CAATGGCCATTGCATGGACACCAATGAATGCATCCAGTTCCCATTTGTGTGCCCTCGAGACAAACCCGTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS CCA 72 bp | GTTGACACATACGGGTTTGTCTCGAGGGCACACAAATaGGAACTGGATGCATTCATTGGTGTCTCTAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: VDTYGFVSRAHK*ELDAFIGVSSG Trigger: CCCACTAGAGACACCAATGAATGCATCCAGTTCCCATTTGTGTGCCCTCGAGACAAACCCGTATGTGTCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238182.2 |
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| CDS CAA 72 bp | ACAAAGGTACCGTTGCCTTGGTTGTGGAAGAGGAAGTaGGGCCCGTTCTCGTTGTCACAGAAGATATCTGAG | + |
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Preference number: 6 (lower is better) Translates to: TKVPLPWLWKRK*GPFSLSQKISE Trigger: CTCAGATATCTTCTGTGACAACGAGAACGGGCCCAACTTCCTCTTCCACAACCAAGGCAACGGTACCTTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS CAA 72 bp | GCAATGTTGTTGAAGAAGACTTCCAGTTCCTGGTCATaGTCAAAGTCGGCAGCAATGACAGTCCGGACAGGG | + |
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Preference number: 6 (lower is better) Translates to: AMLLKKTSSSWS*SKSAAMTVRTG Trigger: CCCTGTCCGGACTGTCATTGCTGCCGACTTTGACAATGACCAGGAACTGGAAGTCTTCTTCAACAACATTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS TCA 72 bp | TTTTATTGGTCCGGCACCTGTAGCTTCCATAGGTGTTaGCACATACGGGTTTGTCTCGAGGGCACACAAATG | + |
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Preference number: 6 (lower is better) Translates to: FYWSGTCSFHRC*HIRVCLEGTQM Trigger: CATTTGTGTGCCCTCGAGACAAACCCGTATGTGTCAACACCTATGGAAGCTACAGGTGCCGGACCAATAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048630.8 ENSMUST00000238182.2 ENSMUST00000238290.2 |
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| CDS CCA 72 bp | GTTGACACATACGGGTTTGTCTCGAGGGCACACAAATaGGAACTGGATGCATTCATTGGTGTCCATGCAATG | + |
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Preference number: 6 (lower is better) Translates to: VDTYGFVSRAHK*ELDAFIGVHAM Trigger: CATTGCATGGACACCAATGAATGCATCCAGTTCCCATTTGTGTGCCCTCGAGACAAACCCGTATGTGTCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS CAA 90 bp | TCACTCAGGATGTCTTCCCACCGGTTATTTCGGAATTTGAACAACTaGTCTGTGTATGTGGCCACACCTGAGAAGGCGTTATTGGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: SLRMSSHRLFRNLNN*SVYVATPEKALLVL Trigger: CAACACCAATAACGCCTTCTCAGGTGTGGCCACATACACAGACAAGTTGTTCAAATTCCGAAATAACCGGTGGGAAGACATCCTGAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS CAA 90 bp | TTGACGTCATCACTCAGGATGTCTTCCCACCGGTTATTTCGGAATTaGAACAACTTGTCTGTGTATGTGGCCACACCTGAGAAGGCGTTA | + |
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Preference number: 6 (lower is better) Translates to: LTSSLRMSSHRLFRN*NNLSVYVATPEKAL Trigger: TAACGCCTTCTCAGGTGTGGCCACATACACAGACAAGTTGTTCAAATTCCGAAATAACCGGTGGGAAGACATCCTGAGTGATGACGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS TCA 72 bp | CACTCAGGATGTCTTCCCACCGGTTATTTCGGAATTTaGACAACTTGTCTGTGTATGTGGCCACACCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: HSGCLPTGYFGI*TTCLCMWPHLR Trigger: TCTCAGGTGTGGCCACATACACAGACAAGTTGTTCAAATTCCGAAATAACCGGTGGGAAGACATCCTGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS CAA 72 bp | TCACTCAGGATGTCTTCCCACCGGTTATTTCGGAATTaGAACAACTTGTCTGTGTATGTGGCCACACCTGAG | + |
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Preference number: 6 (lower is better) Translates to: SLRMSSHRLFRN*NNLSVYVATPE Trigger: CTCAGGTGTGGCCACATACACAGACAAGTTGTTCAAATTCCGAAATAACCGGTGGGAAGACATCCTGAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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| CDS CAA 72 bp | ATGTCTTCCCACCGGTTATTTCGGAATTTGAACAACTaGTCTGTGTATGTGGCCACACCTGAGAAGGCGTTA | + |
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Preference number: 6 (lower is better) Translates to: MSSHRLFRNLNN*SVYVATPEKAL Trigger: TAACGCCTTCTCAGGTGTGGCCACATACACAGACAAGTTGTTCAAATTCCGAAATAACCGGTGGGAAGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048630.8 ENSMUST00000238290.2 |
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