Pregenerated sensors for CRPPA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043153Ensembl transcript IDs: ENSMUST00000062041.6, ENSMUST00000220519.2, ENSMUST00000221177.2, ENSMUST00000221452.2, ENSMUST00000221895.2, ENSMUST00000223068.2, ENSMUST00000223205.2
Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGCTGCCTGTTGTGTCTGAGAGGGAGAGGACATGCTCAGTCCCATaGTCAACCCTAGATGTCCCAGGGCTGGATAGTTCTCAAGGGGGC | + |
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Preference number: 1 (lower is better) Translates to: GLPVVSERERTCSVP*STLDVPGLDSSQGG Trigger: GCCCCCTTGAGAACTATCCAGCCCTGGGACATCTAGGGTTGAGCATGGGACTGAGCATGTCCTCTCCCTCTCAGACACAACAGGCAGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
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| 3UTR CCA 90 bp | GGGCAGTGTGGCACTGAGGGGGCACCTCAGTGGTGTGTGTGGCTTTaGGTACTACCAGACAACGCACTAAACCCTCCTGAGATCCAAGGA | + |
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Preference number: 1 (lower is better) Translates to: GQCGTEGAPQWCVWL*VLPDNALNPPEIQG Trigger: TCCTTGGATCTCAGGAGGGTTTAGTGCGTTGTCTGGTAGTACCCAAAGCCACACACACCACTGAGGTGCCCCCTCAGTGCCACACTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
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| 3UTR GCA 90 bp | AGGATGAGAACCACTGCCCAGGAGGAATGGACAGGGGATGGAGTATaGTTCAAGCCCAGAATTAGGAGAATGAAGGATCTTAGGGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: RMRTTAQEEWTGDGV*FKPRIRRMKDLRGG Trigger: TCCTCCCCTAAGATCCTTCATTCTCCTAATTCTGGGCTTGAAGCATACTCCATCCCCTGTCCATTCCTCCTGGGCAGTGGTTCTCATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
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| 3UTR CCA 90 bp | AGTCTTCCAGCGTTAGGAAGGATGAGAACCACTGCCCAGGAGGAATaGACAGGGGATGGAGTATGCTTCAAGCCCAGAATTAGGAGAATG | + |
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Preference number: 1 (lower is better) Translates to: SLPALGRMRTTAQEE*TGDGVCFKPRIRRM Trigger: CATTCTCCTAATTCTGGGCTTGAAGCATACTCCATCCCCTGTCCATTCCTCCTGGGCAGTGGTTCTCATCCTTCCTAACGCTGGAAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
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| 3UTR CCA 90 bp | TTAGCTAACTCCATAGCACTGGCATCCCTGCTTTTCAGAAGACCATaGGATGGATGGACTGAAGCGACTCAACTTTCAGGAGGCTCTCCA | + |
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Preference number: 1 (lower is better) Translates to: LANSIALASLLFRRP*DGWTEATQLSGGSP Trigger: TGGAGAGCCTCCTGAAAGTTGAGTCGCTTCAGTCCATCCATCCCATGGTCTTCTGAAAAGCAGGGATGCCAGTGCTATGGAGTTAGCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062041.6 ENSMUST00000223205.2 |
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| 3UTR CCA 90 bp | GATCTCCTACACATCCAGGATGCGGCTGAGCTTGAGAACTCTGACTaGAACCATAGAGCCTGCAGAACACAGAGAGAATTCCCTTTCTGT | + |
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Preference number: 1 (lower is better) Translates to: DLLHIQDAAELENSD*NHRACRTQREFPFC Trigger: ACAGAAAGGGAATTCTCTCTGTGTTCTGCAGGCTCTATGGTTCCAGTCAGAGTTCTCAAGCTCAGCCGCATCCTGGATGTGTAGGAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
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| 3UTR GCA 90 bp | CAGGATGCGGCTGAGCTTGAGAACTCTGACTGGAACCATAGAGCCTaGAGAACACAGAGAGAATTCCCTTTCTGTGTGCTGATTACATTC | + |
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Preference number: 1 (lower is better) Translates to: QDAAELENSDWNHRA*RTQREFPFCVLITF Trigger: GAATGTAATCAGCACACAGAAAGGGAATTCTCTCTGTGTTCTGCAGGCTCTATGGTTCCAGTCAGAGTTCTCAAGCTCAGCCGCATCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
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| 3UTR GCA 90 bp | AGTCTCACAATTACAGAGAGCTCAGCTTTCCACATGCGAGCCAACTaGTTGCCTACAACTCTAAAAGGAAGCTACACATCTGGGTCAAGG | + |
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Preference number: 1 (lower is better) Translates to: SLTITESSAFHMRAN*LPTTLKGSYTSGSR Trigger: CCTTGACCCAGATGTGTAGCTTCCTTTTAGAGTTGTAGGCAAGCAGTTGGCTCGCATGTGGAAAGCTGAGCTCTCTGTAATTGTGAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
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| 3UTR TCA 90 bp | ACCATAGAGCCTGCAGAACACAGAGAGAATTCCCTTTCTGTGTGCTaGTTACATTCCCAGCACACTAGTAAGTACTGGCTGGGTGTTAAA | + |
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Preference number: 1 (lower is better) Translates to: TIEPAEHRENSLSVC*LHSQHTSKYWLGVK Trigger: TTTAACACCCAGCCAGTACTTACTAGTGTGCTGGGAATGTAATCAGCACACAGAAAGGGAATTCTCTCTGTGTTCTGCAGGCTCTATGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
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| 3UTR TCA 90 bp | TACTCTGCTACACTTGCAAACAAGAAACCTAGCATAACTGTCTCCTaGGAAGCTTCATCCAGCAGCAGAGGCAGCCAAATATCAGATGGA | + |
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Preference number: 1 (lower is better) Translates to: YSATLANKKPSITVS*EASSSSRGSQISDG Trigger: TCCATCTGATATTTGGCTGCCTCTGCTGCTGGATGAAGCTTCTCAGGAGACAGTTATGCTAGGTTTCTTGTTTGCAAGTGTAGCAGAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
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| 3UTR GCA 90 bp | ATCTCTGATACTTATAAGAAACACAATTTACTAGTGTCTAGTATGTaGTGGCCATTAGGCCTCCAACTGTATCTGAGCCATACCTTGGGG | + |
|
Preference number: 1 (lower is better) Translates to: ISDTYKKHNLLVSSM*WPLGLQLYLSHTLG Trigger: CCCCAAGGTATGGCTCAGATACAGTTGGAGGCCTAATGGCCAGCACATACTAGACACTAGTAAATTGTGTTTCTTATAAGTATCAGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
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| 3UTR CCA 90 bp | ATAAACAGACCAAATGGAGAAACAGAGCATCACAAGAAGAAGGTATaGAGAGACCAGGAGAGTTTGCCAGAACATGACAATGAGAGAGTA | + |
|
Preference number: 1 (lower is better) Translates to: INRPNGETEHHKKKV*RDQESLPEHDNERV Trigger: TACTCTCTCATTGTCATGTTCTGGCAAACTCTCCTGGTCTCTCCATACCTTCTTCTTGTGATGCTCTGTTTCTCCATTTGGTCTGTTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
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| 3UTR CCA 90 bp | TCCCAGCACACTAGTAAGTACTGGCTGGGTGTTAAATACACTATGTaGCATCTTAAGGGCAATATAGTGATGAAAAGCAAGCATTATTCC | + |
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Preference number: 1 (lower is better) Translates to: SQHTSKYWLGVKYTM*HLKGNIVMKSKHYS Trigger: GGAATAATGCTTGCTTTTCATCACTATATTGCCCTTAAGATGCCACATAGTGTATTTAACACCCAGCCAGTACTTACTAGTGTGCTGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
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| 3UTR TCA 90 bp | CCCCCAGTATCAACATTTTTCATAAACATTCTTCTCCATCACCTCTaGTTGCCTAATAAAGATCTGATCAGAGAGTTAGCTGGGCATAAG | + |
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Preference number: 1 (lower is better) Translates to: PPVSTFFINILLHHL*LPNKDLIRELAGHK Trigger: CTTATGCCCAGCTAACTCTCTGATCAGATCTTTATTAGGCAATCAGAGGTGATGGAGAAGAATGTTTATGAAAAATGTTGATACTGGGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
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| 3UTR TCA 90 bp | TGTCTTTGTGTTATTCAAGTGTGTATTTCTGTACCTGCAGAGAGTTaGATACAGGCTAGAATTTGGTATTGTTATTTTTATGAAGCACCC | + |
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Preference number: 1 (lower is better) Translates to: CLCVIQVCISVPAES*IQARIWYCYFYEAP Trigger: GGGTGCTTCATAAAAATAACAATACCAAATTCTAGCCTGTATTCAACTCTCTGCAGGTACAGAAATACACACTTGAATAACACAAAGACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGCACTGAGGGGGCACCTCAGTGGTGTGTGTGGCTTTGGGTACTACCAGACAATGGAAGGCACTCCTTaGTGCTCTGACAGGATAGTG | + |
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Preference number: 2 (lower is better) Translates to: VALRGHLSGVCGFGYYQTMEGTP*CSDRIV Trigger: CACTATCCTGTCAGAGCATCAAGGAGTGCCTTCCAT...TGTCTGGTAGTACCCAAAGCCACACACACCACTGAGGTGCCCCCTCAGTGCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCTTGTGCTTCCAGTAGAGGAACAGGGATATCAACCTACCCATAAGACCTTCGGGGCTCCCCTTCTCTaGGAAGAAGGGCAAGGCATA | + |
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Preference number: 2 (lower is better) Translates to: SLVLPVEEQGYQPTHKTFGAPLL*EEGQGI Trigger: TATGCCTTGCCCTTCTTCTCAGAGAAGGGGAGCCCC...GAAGGTCTTATGGGTAGGTTGATATCCCTGTTCCTCTACTGGAAGCACAAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
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| 3UTR-3UTR GCA 90 bp | CTGAAGCGACTCAACTTTCAGGAGGCTCTCCAGACACTGCTGAAACGAACCCAGCCCCTTTCCTGTTTCTaGCCAGTGTTTACCAGCATG | + |
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Preference number: 2 (lower is better) Translates to: LKRLNFQEALQTLLKRTQPLSCF*PVFTSM Trigger: CATGCTGGTAAACACTGGGCAGAAACAGGAAAGGGG...CTGGGTTCGTTTCAGCAGTGTCTGGAGAGCCTCCTGAAAGTTGAGTCGCTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062041.6 ENSMUST00000223205.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGGGCATAAGAGAATAAGGAAGGACCTCCAACCTAAGTCAGGGGGTCCCATAGGAATGGACAGGGGATaGAGTATGCTTCAAGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: AGHKRIRKDLQPKSGGPIGMDRG*SMLQAQ Trigger: CTGGGCTTGAAGCATACTCCATCCCCTGTCCATTCC...TATGGGACCCCCTGACTTAGGTTGGAGGTCCTTCCTTATTCTCTTATGCCCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
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| 3UTR-3UTR TCA 90 bp | ACTTGGCTACCTAGAGAGTATGAAGGCCCCAGAAATGTGGACCTATGTAGGCCCTCCCTTTCTGTGTGCTaGTTACATTCCCAGCACACT | + |
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Preference number: 2 (lower is better) Translates to: TWLPREYEGPRNVDLCRPSLSVC*LHSQHT Trigger: AGTGTGCTGGGAATGTAATCAGCACACAGAAAGGGA...GGGCCTACATAGGTCCACATTTCTGGGGCCTTCATACTCTCTAGGTAGCCAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGCACTGAGGGGGCACCTCAGTGGTGTGTGTGGCTTTGGGTACTACCAGACAGTACAAACTATTATATaGAAGGCACTCCTTGATGCT | + |
|
Preference number: 2 (lower is better) Translates to: VALRGHLSGVCGFGYYQTVQTII*KALLDA Trigger: AGCATCAAGGAGTGCCTTCCATATAATAGTTTGTAC...TGTCTGGTAGTACCCAAAGCCACACACACCACTGAGGTGCCCCCTCAGTGCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGCACTGAGGGGGCACCTCAGTGGTGTGTGTGGCTTTGGGTACTACCAGACACTAGTAAGTACTGGCTaGGTGTTAAATACACTATGT | + |
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Preference number: 2 (lower is better) Translates to: VALRGHLSGVCGFGYYQTLVSTG*VLNTLC Trigger: ACATAGTGTATTTAACACCCAGCCAGTACTTACTAG...TGTCTGGTAGTACCCAAAGCCACACACACCACTGAGGTGCCCCCTCAGTGCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCAACTGCTTGCCTACAACTCTAAAAGGAAGCTACACATCTGGGTCAAGGGCTGGTGTGTGTGGCTTTaGGTACTACCAGACAACGCA | + |
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Preference number: 2 (lower is better) Translates to: SQLLAYNSKRKLHIWVKGWCVWL*VLPDNA Trigger: TGCGTTGTCTGGTAGTACCCAAAGCCACACACACCA...GCCCTTGACCCAGATGTGTAGCTTCCTTTTAGAGTTGTAGGCAAGCAGTTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGACAGCCTTGTGCTTCCAGTAGAGGAACAGGGATATCAACCTACCCATAAGAGCATAACTGTCTCCTaGGAAGCTTCATCCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: EDSLVLPVEEQGYQPTHKSITVS*EASSSS Trigger: GCTGCTGGATGAAGCTTCTCAGGAGACAGTTATGCT...CTTATGGGTAGGTTGATATCCCTGTTCCTCTACTGGAAGCACAAGGCTGTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCAACTGCTTGCCTACAACTCTAAAAGGAAGCTACACATCTGGGTCAAGGGCTGGAACCATAGAGCCTaGAGAACACAGAGAGAATTC | + |
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Preference number: 2 (lower is better) Translates to: SQLLAYNSKRKLHIWVKGWNHRA*RTQREF Trigger: GAATTCTCTCTGTGTTCTGCAGGCTCTATGGTTCCA...GCCCTTGACCCAGATGTGTAGCTTCCTTTTAGAGTTGTAGGCAAGCAGTTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
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| 3UTR-3UTR CCA 90 bp | GATGGACTGAAGCGACTCAACTTTCAGGAGGCTCTCCAGACACTGCTGAAACGACAGTGTTTACCAGCATaGTTTTCGTTTTCTTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: DGLKRLNFQEALQTLLKRQCLPA*FSFSSG Trigger: CCCAGAAGAAAACGAAAACCATGCTGGTAAACACTG...TCGTTTCAGCAGTGTCTGGAGAGCCTCCTGAAAGTTGAGTCGCTTCAGTCCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062041.6 ENSMUST00000223205.2 |
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| 3UTR-3UTR CCA 90 bp | TATAAACCGTTCTGGTATCTACCCCATGGCTTCTTCCGTTTTCCCAGCATTAATACTGCCCAGGAGGAATaGACAGGGGATGGAGTATGC | + |
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Preference number: 2 (lower is better) Translates to: YKPFWYLPHGFFRFPSINTAQEE*TGDGVC Trigger: GCATACTCCATCCCCTGTCCATTCCTCCTGGGCAGT...ATTAATGCTGGGAAAACGGAAGAAGCCATGGGGTAGATACCAGAACGGTTTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGACAGCCTTGTGCTTCCAGTAGAGGAACAGGGATATCAACCTACCCATAAGCAAAGTCAACAAACCTaGGGCTCACAAAGACTGAGC | + |
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Preference number: 2 (lower is better) Translates to: EDSLVLPVEEQGYQPTHKQSQQT*GSQRLS Trigger: GCTCAGTCTTTGTGAGCCCCAGGTTTGTTGACTTTG...CTTATGGGTAGGTTGATATCCCTGTTCCTCTACTGGAAGCACAAGGCTGTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
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| 3UTR CAA 90 bp | GAAACAGAGCATCACAAGAAGAAGGTATGGAGAGACCAGGAGAGTTaGCCAGAACATGACAATGAGAGAGTAGCCATGAGGACACACATG | + |
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Preference number: 2 (lower is better) Translates to: ETEHHKKKVWRDQES*PEHDNERVAMRTHM Trigger: CATGTGTGTCCTCATGGCTACTCTCTCATTGTCATGTTCTGGCAAACTCTCCTGGTCTCTCCATACCTTCTTCTTGTGATGCTCTGTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
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| 3UTR-3UTR GCA 90 bp | CTGAAGCGACTCAACTTTCAGGAGGCTCTCCAGACACTGCTGAAACGAACCCAGCGTTTCAATTTCACTTaGTGCAGTAGTGAACAGATT | + |
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Preference number: 2 (lower is better) Translates to: LKRLNFQEALQTLLKRTQRFNFT*CSSEQI Trigger: AATCTGTTCACTACTGCAGCAAGTGAAATTGAAACG...CTGGGTTCGTTTCAGCAGTGTCTGGAGAGCCTCCTGAAAGTTGAGTCGCTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062041.6 ENSMUST00000223205.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGGAGGCTCTCCAGACACTGCTGAAACGAACCCAGAAGAAGTAGAGACTCTTCAGTGTTTACCAGCATaGTTTTCGTTTTCTTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: SGGSPDTAETNPEEVETLQCLPA*FSFSSG Trigger: CCCAGAAGAAAACGAAAACCATGCTGGTAAACACTG...AAGAGTCTCTACTTCTTCTGGGTTCGTTTCAGCAGTGTCTGGAGAGCCTCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062041.6 ENSMUST00000223205.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCTTGTGCTTCCAGTAGAGGAACAGGGATATCAACCTACCCATAAGACCTTCAATGGGGCATTTGTCTaGGTATTAACAGCCTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: SLVLPVEEQGYQPTHKTFNGAFV*VLTACL Trigger: CAAGCAGGCTGTTAATACCCAGACAAATGCCCCATT...GAAGGTCTTATGGGTAGGTTGATATCCCTGTTCCTCTACTGGAAGCACAAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCTTGTGCTTCCAGTAGAGGAACAGGGATATCAACCTACCCATAAGACCTTCCACAAGAAGAAGGTATaGAGAGACCAGGAGAGTTTG | + |
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Preference number: 2 (lower is better) Translates to: SLVLPVEEQGYQPTHKTFHKKKV*RDQESL Trigger: CAAACTCTCCTGGTCTCTCCATACCTTCTTCTTGTG...GAAGGTCTTATGGGTAGGTTGATATCCCTGTTCCTCTACTGGAAGCACAAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCTTGTGCTTCCAGTAGAGGAACAGGGATATCAACCTACCCATAAGACCTTCCAGCCAAATATCAGATaGAGCTCAGAAAGTCTCGTG | + |
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Preference number: 2 (lower is better) Translates to: SLVLPVEEQGYQPTHKTFQPNIR*SSESLV Trigger: CACGAGACTTTCTGAGCTCCATCTGATATTTGGCTG...GAAGGTCTTATGGGTAGGTTGATATCCCTGTTCCTCTACTGGAAGCACAAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCTTGTGCTTCCAGTAGAGGAACAGGGATATCAACCTACCCATAAGACCTTCAGAGGAAACAGAAACTaGATGCCTGGTCAATCAATG | + |
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Preference number: 2 (lower is better) Translates to: SLVLPVEEQGYQPTHKTFRGNRN*MPGQSM Trigger: CATTGATTGACCAGGCATTCAGTTTCTGTTTCCTCT...GAAGGTCTTATGGGTAGGTTGATATCCCTGTTCCTCTACTGGAAGCACAAGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
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| 3UTR-3UTR CCA 90 bp | GCGGCTGAGCTTGAGAACTCTGACTGGAACCATAGAGCCTGCAGAACACAGAGAATGTGGTATAATAAGTaGTGTTTCACAAGCAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: AAELENSDWNHRACRTQRMWYNK*CFTSRK Trigger: TTTCCTGCTTGTGAAACACCACTTATTATACCACAT...TCTCTGTGTTCTGCAGGCTCTATGGTTCCAGTCAGAGTTCTCAAGCTCAGCCGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCAACTGCTTGCCTACAACTCTAAAAGGAAGCTACACATCTGGGTCAAGGGCCACACTAGTAAGTACTaGCTGGGTGTTAAATACACT | + |
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Preference number: 2 (lower is better) Translates to: SQLLAYNSKRKLHIWVKGHTSKY*LGVKYT Trigger: AGTGTATTTAACACCCAGCCAGTACTTACTAGTGTG...GCCCTTGACCCAGATGTGTAGCTTCCTTTTAGAGTTGTAGGCAAGCAGTTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCAACTGCTTGCCTACAACTCTAAAAGGAAGCTACACATCTGGGTCAAGGGCCTAGTAAGTACTGGCTaGGTGTTAAATACACTATGT | + |
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Preference number: 2 (lower is better) Translates to: SQLLAYNSKRKLHIWVKGLVSTG*VLNTLC Trigger: ACATAGTGTATTTAACACCCAGCCAGTACTTACTAG...GCCCTTGACCCAGATGTGTAGCTTCCTTTTAGAGTTGTAGGCAAGCAGTTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAGGGTAACTAAAACACAGTCTCACAATTACAGAGAGCTCAGCTTTCCACATCTTGAGAACTCTGACTaGAACCATAGAGCCTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: LRVTKTQSHNYRELSFPHLENSD*NHRACR Trigger: TCTGCAGGCTCTATGGTTCCAGTCAGAGTTCTCAAG...ATGTGGAAAGCTGAGCTCTCTGTAATTGTGAGACTGTGTTTTAGTTACCCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
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| 3UTR-3UTR GCA 90 bp | ATACAGGCTAGAATTTGGTATTGTTATTTTTATGAAGCACCCCCAGTATCAACAAAGGATGAGAACCACTaGCCAGGAGGAATGGACAGG | + |
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Preference number: 2 (lower is better) Translates to: IQARIWYCYFYEAPPVSTKDENH*PGGMDR Trigger: CCTGTCCATTCCTCCTGGGCAGTGGTTCTCATCCTT...TGTTGATACTGGGGGTGCTTCATAAAAATAACAATACCAAATTCTAGCCTGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCTGCAGAACACAGAGAGAATTCCCTTTCTGTGTGCTGATTACATTCCCAGCATGTGGTATAATAAGTaGTGTTTCACAAGCAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: SLQNTERIPFLCADYIPSMWYNK*CFTSRK Trigger: TTTCCTGCTTGTGAAACACCACTTATTATACCACAT...GCTGGGAATGTAATCAGCACACAGAAAGGGAATTCTCTCTGTGTTCTGCAGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAGGGTAACTAAAACACAGTCTCACAATTACAGAGAGCTCAGCTTTCCACATGCTCAGAGTCTAATTTaGAAAAGAACAGTCACCAGC | + |
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Preference number: 2 (lower is better) Translates to: LRVTKTQSHNYRELSFPHAQSLI*KRTVTS Trigger: GCTGGTGACTGTTCTTTTCCAAATTAGACTCTGAGC...ATGTGGAAAGCTGAGCTCTCTGTAATTGTGAGACTGTGTTTTAGTTACCCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
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| 3UTR-3UTR TCA 90 bp | ATACAGGCTAGAATTTGGTATTGTTATTTTTATGAAGCACCCCCAGTATCAACAGGGATCACCACAGCATaGGGAACTGTACCAAAGTCT | + |
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Preference number: 2 (lower is better) Translates to: IQARIWYCYFYEAPPVSTGITTA*GTVPKS Trigger: AGACTTTGGTACAGTTCCTCATGCTGTGGTGATCCC...TGTTGATACTGGGGGTGCTTCATAAAAATAACAATACCAAATTCTAGCCTGTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCTTTTCTGGGTGGAGCCATTTTTATTAGACACATTATCTCATGGACACAAATCAAGATGGGGAAGGTaGTGCCTTAGGGAAGTATCT | + |
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Preference number: 2 (lower is better) Translates to: ILFWVEPFLLDTLSHGHKSRWGR*CLREVS Trigger: AGATACTTCCCTAAGGCACCACCTTCCCCATCTTGA...TTTGTGTCCATGAGATAATGTGTCTAATAAAAATGGCTCCACCCAGAAAAGGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000223205.2 |
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| 3UTR-3UTR TCA 90 bp | TATAAACCGTTCTGGTATCTACCCCATGGCTTCTTCCGTTTTCCCAGCATTAATAACATTTGGTTTGAGTaGTTGGTGTGCTTTTGCAAT | + |
|
Preference number: 2 (lower is better) Translates to: YKPFWYLPHGFFRFPSINNIWFE*LVCFCN Trigger: ATTGCAAAAGCACACCAATCACTCAAACCAAATGTT...ATTAATGCTGGGAAAACGGAAGAAGCCATGGGGTAGATACCAGAACGGTTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGTTGTCTTTGTGTTATTCAAGTGTGTATTTCTGTACCTGCAGAGAGTTGAATCCAGAATTAGGAGAATaGAGGATCTTAGGGGAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: RLSLCYSSVYFCTCRELNPELGE*RILGEE Trigger: TTCCTCCCCTAAGATCCTTCATTCTCCTAATTCTGG...ATTCAACTCTCTGCAGGTACAGAAATACACACTTGAATAACACAAAGACAACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| 3UTR-3UTR CCA 90 bp | TATAAACCGTTCTGGTATCTACCCCATGGCTTCTTCCGTTTTCCCAGCATTAATCATAAACAGACCAAATaGAGAAACAGAGCATCACAA | + |
|
Preference number: 2 (lower is better) Translates to: YKPFWYLPHGFFRFPSINHKQTK*RNRASQ Trigger: TTGTGATGCTCTGTTTCTCCATTTGGTCTGTTTATG...ATTAATGCTGGGAAAACGGAAGAAGCCATGGGGTAGATACCAGAACGGTTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGTTGTCTTTGTGTTATTCAAGTGTGTATTTCTGTACCTGCAGAGAGTTGAATCTTCTCCATCACCTCTaGTTGCCTAATAAAGATCTG | + |
|
Preference number: 2 (lower is better) Translates to: RLSLCYSSVYFCTCRELNLLHHL*LPNKDL Trigger: CAGATCTTTATTAGGCAATCAGAGGTGATGGAGAAG...ATTCAACTCTCTGCAGGTACAGAAATACACACTTGAATAACACAAAGACAACCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| 3UTR CCA 72 bp | GAGAGGGGGCAGTGTGGCACTGAGGGGGCACCTCAGTaGTGTGTGTGGCTTTGGGTACTACCAGACAACGCA | + |
|
Preference number: 3 (lower is better) Translates to: ERGQCGTEGAPQ*CVWLWVLPDNA Trigger: TGCGTTGTCTGGTAGTACCCAAAGCCACACACACCACTGAGGTGCCCCCTCAGTGCCACACTGCCCCCTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| 3UTR GCA 72 bp | ACTGGGCTGCCTGTTGTGTCTGAGAGGGAGAGGACATaGTCAGTCCCATGCTCAACCCTAGATGTCCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: TGLPVVSERERT*SVPCSTLDVPG Trigger: CCCTGGGACATCTAGGGTTGAGCATGGGACTGAGCATGTCCTCTCCCTCTCAGACACAACAGGCAGCCCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| 3UTR CCA 72 bp | GGCACTGAGGGGGCACCTCAGTGGTGTGTGTGGCTTTaGGTACTACCAGACAACGCACTAAACCCTCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: GTEGAPQWCVWL*VLPDNALNPPE Trigger: CTCAGGAGGGTTTAGTGCGTTGTCTGGTAGTACCCAAAGCCACACACACCACTGAGGTGCCCCCTCAGTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| 3UTR CCA 72 bp | CAGTGTGGCACTGAGGGGGCACCTCAGTGGTGTGTGTaGCTTTGGGTACTACCAGACAACGCACTAAACCCT | + |
|
Preference number: 3 (lower is better) Translates to: QCGTEGAPQWCV*LWVLPDNALNP Trigger: AGGGTTTAGTGCGTTGTCTGGTAGTACCCAAAGCCACACACACCACTGAGGTGCCCCCTCAGTGCCACACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| 3UTR TCA 72 bp | CAGGGCTGGATAGTTCTCAAGGGGGCTCCCCTTCTCTaGGAAGAAGGGCAAGGCATAATCAGGAGAGGGATC | + |
|
Preference number: 3 (lower is better) Translates to: QGWIVLKGAPLL*EEGQGIIRRGI Trigger: GATCCCTCTCCTGATTATGCCTTGCCCTTCTTCTCAGAGAAGGGGAGCCCCCTTGAGAACTATCCAGCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| 3UTR GCA 72 bp | GTTGTGTCTGAGAGGGAGAGGACATGCTCAGTCCCATaGTCAACCCTAGATGTCCCAGGGCTGGATAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: VVSERERTCSVP*STLDVPGLDSS Trigger: AGAACTATCCAGCCCTGGGACATCTAGGGTTGAGCATGGGACTGAGCATGTCCTCTCCCTCTCAGACACAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| 3UTR TCA 72 bp | GTTGGAGGCTGTCTCTTGATTCTGTTGCCTGCCAGTTaGTCCCCTTGTCTTAACTGGGCTGCCTGTTGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: VGGCLLILLPAS*SPCLNWAACCV Trigger: GACACAACAGGCAGCCCAGTTAAGACAAGGGGATCAACTGGCAGGCAACAGAATCAAGAGACAGCCTCCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| 3UTR CCA 72 bp | CTGGCATCCCTGCTTTTCAGAAGACCATGGGATGGATaGACTGAAGCGACTCAACTTTCAGGAGGCTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LASLLFRRPWDG*TEATQLSGGSP Trigger: TGGAGAGCCTCCTGAAAGTTGAGTCGCTTCAGTCCATCCATCCCATGGTCTTCTGAAAAGCAGGGATGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062041.6 ENSMUST00000223205.2 |
||
| 3UTR TCA 72 bp | ATCCCTGCTTTTCAGAAGACCATGGGATGGATGGACTaGAGCGACTCAACTTTCAGGAGGCTCTCCAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: IPAFQKTMGWMD*SDSTFRRLSRH Trigger: GTGTCTGGAGAGCCTCCTGAAAGTTGAGTCGCTTCAGTCCATCCATCCCATGGTCTTCTGAAAAGCAGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062041.6 ENSMUST00000223205.2 |
||
| 3UTR CCA 72 bp | CACATCCAGGATGCGGCTGAGCTTGAGAACTCTGACTaGAACCATAGAGCCTGCAGAACACAGAGAGAATTC | + |
|
Preference number: 3 (lower is better) Translates to: HIQDAAELENSD*NHRACRTQREF Trigger: GAATTCTCTCTGTGTTCTGCAGGCTCTATGGTTCCAGTCAGAGTTCTCAAGCTCAGCCGCATCCTGGATGTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGACAGCCTTGTGCTTCCAGTAGAGGAACAGGGATATCAACCTACCCATAAGGTTGGAGGCTGTCTCTaGATTCTGTTGCCTGCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: EDSLVLPVEEQGYQPTHKVGGCL*ILLPAS Trigger: ACTGGCAGGCAACAGAATCAAGAGACAGCCTCCAAC...CTTATGGGTAGGTTGATATCCCTGTTCCTCTACTGGAAGCACAAGGCTGTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| 3UTR GCA 72 bp | ACCACTGCCCAGGAGGAATGGACAGGGGATGGAGTATaGTTCAAGCCCAGAATTAGGAGAATGAAGGATCTT | + |
|
Preference number: 3 (lower is better) Translates to: TTAQEEWTGDGV*FKPRIRRMKDL Trigger: AAGATCCTTCATTCTCCTAATTCTGGGCTTGAAGCATACTCCATCCCCTGTCCATTCCTCCTGGGCAGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| 3UTR CCA 72 bp | AGGACACCACAAGAAGACTCACAAAGTCAACAAACCTaGGGCTCACAAAGACTGAGCCACCAACCAAAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RTPQEDSQSQQT*GSQRLSHQPKS Trigger: GCTCTTTGGTTGGTGGCTCAGTCTTTGTGAGCCCCAGGTTTGTTGACTTTGTGAGTCTTCTTGTGGTGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| 3UTR CCA 72 bp | AGCTTCATCCAGCAGCAGAGGCAGCCAAATATCAGATaGAGCTCAGAAAGTCTCGTGGAAGAGGAAGGGATA | + |
|
Preference number: 3 (lower is better) Translates to: SFIQQQRQPNIR*SSESLVEEEGI Trigger: TATCCCTTCCTCTTCCACGAGACTTTCTGAGCTCCATCTGATATTTGGCTGCCTCTGCTGCTGGATGAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| 3UTR TCA 72 bp | TACAAACTATTATATGGAAGGCACTCCTTGATGCTCTaGCAGGATAGTGCAGAGGCCAGGGACAGCCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: YKLLYGRHSLML*QDSAEARDSLP Trigger: TGGAAGGCTGTCCCTGGCCTCTGCACTATCCTGTCAGAGCATCAAGGAGTGCCTTCCATATAATAGTTTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| 3UTR CCA 72 bp | AGATTGAGAGCAATAGGAGACCAAGGGGAAGAAACCTaGAGACATCCCCTTTCCTGTTTCTGCCCAGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: RLRAIGDQGEET*RHPLSCFCPVF Trigger: AAACACTGGGCAGAAACAGGAAAGGGGATGTCTCCAGGTTTCTTCCCCTTGGTCTCCTATTGCTCTCAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062041.6 ENSMUST00000223205.2 |
||
| 3UTR TCA 72 bp | CCTGCAGAACACAGAGAGAATTCCCTTTCTGTGTGCTaGTTACATTCCCAGCACACTAGTAAGTACTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PAEHRENSLSVC*LHSQHTSKYWL Trigger: CAGCCAGTACTTACTAGTGTGCTGGGAATGTAATCAGCACACAGAAAGGGAATTCTCTCTGTGTTCTGCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| 3UTR CCA 72 bp | CTAAAATGTTGTATGCACAAGGAGGGGGCATCAAGATaGGGAAGGTGGTGCCTTAGGGAAGTATCTTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LKCCMHKEGASR*GRWCLREVSLE Trigger: TTCCAAAGATACTTCCCTAAGGCACCACCTTCCCCATCTTGATGCCCCCTCCTTGTGCATACAACATTTTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000223205.2 |
||
| 3UTR TCA 72 bp | CTAAGTTGTACAAACTATTATATGGAAGGCACTCCTTaGTGCTCTGACAGGATAGTGCAGAGGCCAGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: LSCTNYYMEGTP*CSDRIVQRPGT Trigger: TGTCCCTGGCCTCTGCACTATCCTGTCAGAGCATCAAGGAGTGCCTTCCATATAATAGTTTGTACAACTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| 3UTR TCA 72 bp | ACACTTGCAAACAAGAAACCTAGCATAACTGTCTCCTaGGAAGCTTCATCCAGCAGCAGAGGCAGCCAAATA | + |
|
Preference number: 3 (lower is better) Translates to: TLANKKPSITVS*EASSSSRGSQI Trigger: TATTTGGCTGCCTCTGCTGCTGGATGAAGCTTCTCAGGAGACAGTTATGCTAGGTTTCTTGTTTGCAAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| 3UTR GCA 72 bp | ATTACAGAGAGCTCAGCTTTCCACATGCGAGCCAACTaGTTGCCTACAACTCTAAAAGGAAGCTACACATCT | + |
|
Preference number: 3 (lower is better) Translates to: ITESSAFHMRAN*LPTTLKGSYTS Trigger: AGATGTGTAGCTTCCTTTTAGAGTTGTAGGCAAGCAGTTGGCTCGCATGTGGAAAGCTGAGCTCTCTGTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| 3UTR CCA 72 bp | TGCCCAGTGTTTACCAGCATGGTTTTCGTTTTCTTCTaGGATGTCGCTCTATCCATACTAGGCAAGAGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: CPVFTSMVFVFF*DVALSILGKSL Trigger: CAAACTCTTGCCTAGTATGGATAGAGCGACATCCCAGAAGAAAACGAAAACCATGCTGGTAAACACTGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062041.6 ENSMUST00000223205.2 |
||
| 3UTR CCA 72 bp | GCTGATTACATTCCCAGCACACTAGTAAGTACTGGCTaGGTGTTAAATACACTATGTGGCATCTTAAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: ADYIPSTLVSTG*VLNTLCGILRA Trigger: TGCCCTTAAGATGCCACATAGTGTATTTAACACCCAGCCAGTACTTACTAGTGTGCTGGGAATGTAATCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| 3UTR TCA 72 bp | GGGATGGAGTATGCTTCAAGCCCAGAATTAGGAGAATaGAGGATCTTAGGGGAGGAAGAAATAGCAACATTT | + |
|
Preference number: 3 (lower is better) Translates to: GMEYASSPELGE*RILGEEEIATF Trigger: AAATGTTGCTATTTCTTCCTCCCCTAAGATCCTTCATTCTCCTAATTCTGGGCTTGAAGCATACTCCATCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| 3UTR CCA 72 bp | AAACTTGAGCGTTATCATTTTGCTCAGAGTCTAATTTaGAAAAGAACAGTCACCAGCTTCCTGTTGTCCCGA | + |
|
Preference number: 3 (lower is better) Translates to: KLERYHFAQSLI*KRTVTSFLLSR Trigger: TCGGGACAACAGGAAGCTGGTGACTGTTCTTTTCCAAATTAGACTCTGAGCAAAATGATAACGCTCAAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| 3UTR CCA 72 bp | TATAAGAAACACAATTTACTAGTGTCTAGTATGTGCTaGCCATTAGGCCTCCAACTGTATCTGAGCCATACC | + |
|
Preference number: 3 (lower is better) Translates to: YKKHNLLVSSMC*PLGLQLYLSHT Trigger: GGTATGGCTCAGATACAGTTGGAGGCCTAATGGCCAGCACATACTAGACACTAGTAAATTGTGTTTCTTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| 3UTR-3UTR CAA 90 bp | ATACAGGCTAGAATTTGGTATTGTTATTTTTATGAAGCACCCCCAGTATCAACAAGAGACCAGGAGAGTTaGCCAGAACATGACAATGAG | + |
|
Preference number: 3 (lower is better) Translates to: IQARIWYCYFYEAPPVSTRDQES*PEHDNE Trigger: CTCATTGTCATGTTCTGGCAAACTCTCCTGGTCTCT...TGTTGATACTGGGGGTGCTTCATAAAAATAACAATACCAAATTCTAGCCTGTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| 3UTR TCA 72 bp | TTGATGACTATAATCTCAGGGTGTCTAAAAATCACATaGCTACTGACTTGGCTACCTAGAGAGTATGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LMTIISGCLKIT*LLTWLPREYEG Trigger: GCCTTCATACTCTCTAGGTAGCCAAGTCAGTAGTCATGTGATTTTTAGACACCCTGAGATTATAGTCATCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| 3UTR GCA 72 bp | ACTTATAAGAAACACAATTTACTAGTGTCTAGTATGTaGTGGCCATTAGGCCTCCAACTGTATCTGAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: TYKKHNLLVSSM*WPLGLQLYLSH Trigger: ATGGCTCAGATACAGTTGGAGGCCTAATGGCCAGCACATACTAGACACTAGTAAATTGTGTTTCTTATAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| 3UTR TCA 72 bp | CCATACATTAAACAGGAGGGACCTTCCCAGGCTTATTaGAATATCAGTATATATAGTTCCCTTTCTGATAGG | + |
|
Preference number: 3 (lower is better) Translates to: PYIKQEGPSQAY*NISIYSSLSDR Trigger: CCTATCAGAAAGGGAACTATATATACTGATATTTCAATAAGCCTGGGAAGGTCCCTCCTGTTTAATGTATGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| 3UTR GCA 72 bp | TCCTCTTATAAGATTGGATTTAAGGTCATTTCCTTGTaGTTTGTCTATGTTAGGATAGACAGGGCTTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SSYKIGFKVISL*FVYVRIDRACC Trigger: ACAGCAAGCCCTGTCTATCCTAACATAGACAAAGCACAAGGAAATGACCTTAAATCCAATCTTATAAGAGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| 3UTR CCA 72 bp | ACTAGTAAGTACTGGCTGGGTGTTAAATACACTATGTaGCATCTTAAGGGCAATATAGTGATGAAAAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: TSKYWLGVKYTM*HLKGNIVMKSK Trigger: CTTGCTTTTCATCACTATATTGCCCTTAAGATGCCACATAGTGTATTTAACACCCAGCCAGTACTTACTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| 3UTR CCA 72 bp | CATTTTCTTTGGCTGATGTATCAATTTCTTCTATCATaGCTTCTACACCTGAGATTCTCTCTTCCAACTCTA | + |
|
Preference number: 3 (lower is better) Translates to: HFLWLMYQFLLS*LLHLRFSLPTL Trigger: TAGAGTTGGAAGAGAGAATCTCAGGTGTAGAAGCCATGATAGAAGAAATTGATACATCAGCCAAAGAAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGTTGTCTTTGTGTTATTCAAGTGTGTATTTCTGTACCTGCAGAGAGTTGAATATAGCAACATTTGGTTaGAGTGATTGGTGTGCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: RLSLCYSSVYFCTCRELNIATFG*SDWCAF Trigger: AAAAGCACACCAATCACTCAAACCAAATGTTGCTAT...ATTCAACTCTCTGCAGGTACAGAAATACACACTTGAATAACACAAAGACAACCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| 3UTR TCA 72 bp | AGACTGAATTTAAAACTTTACTTCTCACCCGAAACTTaGGCGTTATCATTTTGCTCAGAGTCTAATTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: RLNLKLYFSPET*ALSFCSESNLE Trigger: TTCCAAATTAGACTCTGAGCAAAATGATAACGCTCAAGTTTCGGGTGAGAAGTAAAGTTTTAAATTCAGTCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| 3UTR GCA 72 bp | AAACATAAAGCTGTCATCAAAATGGTAATAGAAGTCTaGAGTGATGGAAGATATAAACCGTTCTGGTATCTA | + |
|
Preference number: 3 (lower is better) Translates to: KHKAVIKMVIEV*SDGRYKPFWYL Trigger: TAGATACCAGAACGGTTTATATCTTCCATCACTGCAGACTTCTATTACCATTTTGATGACAGCTTTATGTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| 3UTR CCA 72 bp | GTGGTGAGTGGATTTTCTTTTCTCATCCAATATAATTaGTGTTCTGTAAGCTCCATGTATATTTATAGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: VVSGFSFLIQYN*CSVSSMYIYRH Trigger: ATGCCTATAAATATACATGGAGCTTACAGAACACCAATTATATTGGATGAGAAAAGAAAATCCACTCACCAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| CDS-3UTR GCA 90 bp | GTGGCACTGAGGGGGCACCTCAGTGGTGTGTGTGGCTTTGGGTACTACCAGACAAGAACTGCTTCGGGGTaGGGACGCCCATCCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VALRGHLSGVCGFGYYQTRTASG*GRPSFP Trigger: GGGAAAGGATGGGCGTCCGCACCCCGAAGCAGTTCT...TGTCTGGTAGTACCCAAAGCCACACACACCACTGAGGTGCCCCCTCAGTGCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220519.2 |
||
| CDS-3UTR GCA 90 bp | CTGAAGCGACTCAACTTTCAGGAGGCTCTCCAGACACTGCTGAAACGAACCCAGAGAACTGCTTCGGGGTaGGGACGCCCATCCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LKRLNFQEALQTLLKRTQRTASG*GRPSFP Trigger: GGGAAAGGATGGGCGTCCGCACCCCGAAGCAGTTCT...CTGGGTTCGTTTCAGCAGTGTCTGGAGAGCCTCCTGAAAGTTGAGTCGCTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062041.6 ENSMUST00000223205.2 |
||
| CDS-3UTR GCA 90 bp | GATGGACTGAAGCGACTCAACTTTCAGGAGGCTCTCCAGACACTGCTGAAACGAAGAACTGCTTCGGGGTaGGGACGCCCATCCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DGLKRLNFQEALQTLLKRRTASG*GRPSFP Trigger: GGGAAAGGATGGGCGTCCGCACCCCGAAGCAGTTCT...TCGTTTCAGCAGTGTCTGGAGAGCCTCCTGAAAGTTGAGTCGCTTCAGTCCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062041.6 ENSMUST00000223205.2 |
||
| CDS-3UTR TCA 90 bp | TGTTGTATGCACAAGGAGGGGGCATCAAGATGGGGAAGGTGGTGCCTTAGGGAAAGGCTTTCCATCTTCTaGGCGAGTGGCACTGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: CCMHKEGASRWGRWCLRERLSIF*ASGTDV Trigger: CACGTCAGTGCCACTCGCTCAGAAGATGGAAAGCCT...TTCCCTAAGGCACCACCTTCCCCATCTTGATGCCCCCTCCTTGTGCATACAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000223205.2 |
||
| CDS-3UTR TCA 90 bp | ATGCACAAGGAGGGGGCATCAAGATGGGGAAGGTGGTGCCTTAGGGAAGTATCTAGGCTTTCCATCTTCTaGGCGAGTGGCACTGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: MHKEGASRWGRWCLREVSRLSIF*ASGTDV Trigger: CACGTCAGTGCCACTCGCTCAGAAGATGGAAAGCCT...AGATACTTCCCTAAGGCACCACCTTCCCCATCTTGATGCCCCCTCCTTGTGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000223205.2 |
||
| CDS-3UTR TCA 90 bp | ATGCACAAGGAGGGGGCATCAAGATGGGGAAGGTGGTGCCTTAGGGAAGTATCTCAGTCCATTGAAAATTaGTCTGTGGCGCGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MHKEGASRWGRWCLREVSQSIEN*SVARGS Trigger: GGAGCCACGCGCCACAGATCAATTTTCAATGGACTG...AGATACTTCCCTAAGGCACCACCTTCCCCATCTTGATGCCCCCTCCTTGTGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000223205.2 |
||
| CDS-3UTR TCA 90 bp | GCGGCTGAGCTTGAGAACTCTGACTGGAACCATAGAGCCTGCAGAACACAGAGACAGTCCATTGAAAATTaGTCTGTGGCGCGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AAELENSDWNHRACRTQRQSIEN*SVARGS Trigger: GGAGCCACGCGCCACAGATCAATTTTCAATGGACTG...TCTCTGTGTTCTGCAGGCTCTATGGTTCCAGTCAGAGTTCTCAAGCTCAGCCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| CDS-3UTR TCA 90 bp | ATGCACAAGGAGGGGGCATCAAGATGGGGAAGGTGGTGCCTTAGGGAAGTATCTAGTGAGTGGTCTAAGTaGCCATCAGCAGAGGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: MHKEGASRWGRWCLREVSSEWSK*PSAEGL Trigger: CAGTCCCTCTGCTGATGGTCACTTAGACCACTCACT...AGATACTTCCCTAAGGCACCACCTTCCCCATCTTGATGCCCCCTCCTTGTGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 |
||
| CDS-3UTR GCA 90 bp | AGCCTTGTGCTTCCAGTAGAGGAACAGGGATATCAACCTACCCATAAGACCTTCAGAACTGCTTCGGGGTaGGGACGCCCATCCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLVLPVEEQGYQPTHKTFRTASG*GRPSFP Trigger: GGGAAAGGATGGGCGTCCGCACCCCGAAGCAGTTCT...GAAGGTCTTATGGGTAGGTTGATATCCCTGTTCCTCTACTGGAAGCACAAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| 3UTR CAA 72 bp | CCAAGGATCTCCTACACATCCAGGATGCGGCTGAGCTaGAGAACTCTGACTGGAACCATAGAGCCTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PRISYTSRMRLS*RTLTGTIEPAE Trigger: TTCTGCAGGCTCTATGGTTCCAGTCAGAGTTCTCAAGCTCAGCCGCATCCTGGATGTGTAGGAGATCCTTGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| CDS-3UTR TCA 90 bp | ACTTGGCTACCTAGAGAGTATGAAGGCCCCAGAAATGTGGACCTATGTAGGCCCCAGTCCATTGAAAATTaGTCTGTGGCGCGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TWLPREYEGPRNVDLCRPQSIEN*SVARGS Trigger: GGAGCCACGCGCCACAGATCAATTTTCAATGGACTG...GGGCCTACATAGGTCCACATTTCTGGGGCCTTCATACTCTCTAGGTAGCCAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| CDS-3UTR TCA 90 bp | CTGAAGCGACTCAACTTTCAGGAGGCTCTCCAGACACTGCTGAAACGAACCCAGAGTTTACAGTCTGGCTaGTCTTCTGCCAGGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKRLNFQEALQTLLKRTQSLQSG*SSARAF Trigger: GAAAGCCCTGGCAGAAGATCAGCCAGACTGTAAACT...CTGGGTTCGTTTCAGCAGTGTCTGGAGAGCCTCCTGAAAGTTGAGTCGCTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062041.6 ENSMUST00000223205.2 |
||
| CDS-3UTR TCA 90 bp | TGTTGTATGCACAAGGAGGGGGCATCAAGATGGGGAAGGTGGTGCCTTAGGGAAAGTTTACAGTCTGGCTaGTCTTCTGCCAGGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CCMHKEGASRWGRWCLRESLQSG*SSARAF Trigger: GAAAGCCCTGGCAGAAGATCAGCCAGACTGTAAACT...TTCCCTAAGGCACCACCTTCCCCATCTTGATGCCCCCTCCTTGTGCATACAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000223205.2 |
||
| CDS-3UTR GCA 90 bp | GTGGCACTGAGGGGGCACCTCAGTGGTGTGTGTGGCTTTGGGTACTACCAGACAAATCATGGCTTCAGCTaGACACAGGTCTTGTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VALRGHLSGVCGFGYYQTNHGFS*TQVLFV Trigger: TACAAACAAGACCTGTGTGCAGCTGAAGCCATGATT...TGTCTGGTAGTACCCAAAGCCACACACACCACTGAGGTGCCCCCTCAGTGCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| CDS-3UTR GCA 90 bp | TGTATGCACAAGGAGGGGGCATCAAGATGGGGAAGGTGGTGCCTTAGGGAAGTAACAGAAGAGGAAGGCTaGTCTCTTCGAGGATACGCA | + |
|
Preference number: 4 (lower is better) Translates to: CMHKEGASRWGRWCLREVTEEEG*SLRGYA Trigger: TGCGTATCCTCGAAGAGAGCAGCCTTCCTCTTCTGT...TACTTCCCTAAGGCACCACCTTCCCCATCTTGATGCCCCCTCCTTGTGCATACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000223205.2 |
||
| CDS-3UTR GCA 90 bp | ATGCACAAGGAGGGGGCATCAAGATGGGGAAGGTGGTGCCTTAGGGAAGTATCTCATGCCACCAGGAGCTaGCCAACAAGTGCAGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: MHKEGASRWGRWCLREVSHATRS*PTSAEF Trigger: AAATTCTGCACTTGTTGGGCAGCTCCTGGTGGCATG...AGATACTTCCCTAAGGCACCACCTTCCCCATCTTGATGCCCCCTCCTTGTGCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000223205.2 |
||
| CDS-3UTR CCA 90 bp | TGTTGTATGCACAAGGAGGGGGCATCAAGATGGGGAAGGTGGTGCCTTAGGGAATTGAAAATTGATCTGTaGCGCGTGGCTCCAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CCMHKEGASRWGRWCLRELKIDL*RVAPAS Trigger: TGAGGCTGGAGCCACGCGCCACAGATCAATTTTCAA...TTCCCTAAGGCACCACCTTCCCCATCTTGATGCCCCCTCCTTGTGCATACAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000223205.2 |
||
| CDS-3UTR TCA 90 bp | GCTGGGCATAAGAGAATAAGGAAGGACCTCCAACCTAAGTCAGGGGGTCCCATAGGGCTTTCAGTCCATTaGAAATTGATCTGTGGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: AGHKRIRKDLQPKSGGPIGLSVH*KLICGA Trigger: CGCGCCACAGATCAATTTTCAATGGACTGAAAGCCC...TATGGGACCCCCTGACTTAGGTTGGAGGTCCTTCCTTATTCTCTTATGCCCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| CDS-3UTR TCA 90 bp | ACTTGGCTACCTAGAGAGTATGAAGGCCCCAGAAATGTGGACCTATGTAGGCCCGGGCTTTCAGTCCATTaGAAATTGATCTGTGGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: TWLPREYEGPRNVDLCRPGLSVH*KLICGA Trigger: CGCGCCACAGATCAATTTTCAATGGACTGAAAGCCC...GGGCCTACATAGGTCCACATTTCTGGGGCCTTCATACTCTCTAGGTAGCCAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| CDS-3UTR TCA 90 bp | TGGAGACATCCCCTTTCCTGTTTCTGCCCAGTGTTTACCAGCATGGTTTTCGTTAGGCTTTCCATCTTCTaGGCGAGTGGCACTGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: WRHPLSCFCPVFTSMVFVRLSIF*ASGTDV Trigger: CACGTCAGTGCCACTCGCTCAGAAGATGGAAAGCCT...AACGAAAACCATGCTGGTAAACACTGGGCAGAAACAGGAAAGGGGATGTCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062041.6 ENSMUST00000223205.2 |
||
| CDS-3UTR GCA 90 bp | AAATGTTGTATGCACAAGGAGGGGGCATCAAGATGGGGAAGGTGGTGCCTTAGGCATGCCACCAGGAGCTaGCCAACAAGTGCAGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: KCCMHKEGASRWGRWCLRHATRS*PTSAEF Trigger: AAATTCTGCACTTGTTGGGCAGCTCCTGGTGGCATG...CCTAAGGCACCACCTTCCCCATCTTGATGCCCCCTCCTTGTGCATACAACATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000223205.2 |
||
| CDS-3UTR TCA 90 bp | TCAGGAGGCTCTCCAGACACTGCTGAAACGAACCCAGAAGAAGTAGAGACTCTTGGGCTTTCAGTCCATTaGAAATTGATCTGTGGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: SGGSPDTAETNPEEVETLGLSVH*KLICGA Trigger: CGCGCCACAGATCAATTTTCAATGGACTGAAAGCCC...AAGAGTCTCTACTTCTTCTGGGTTCGTTTCAGCAGTGTCTGGAGAGCCTCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062041.6 ENSMUST00000223205.2 |
||
| CDS-3UTR TCA 90 bp | AGCCAACTGCTTGCCTACAACTCTAAAAGGAAGCTACACATCTGGGTCAAGGGCAGTTTACAGTCTGGCTaGTCTTCTGCCAGGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SQLLAYNSKRKLHIWVKGSLQSG*SSARAF Trigger: GAAAGCCCTGGCAGAAGATCAGCCAGACTGTAAACT...GCCCTTGACCCAGATGTGTAGCTTCCTTTTAGAGTTGTAGGCAAGCAGTTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGAGGCTCTCCAGACACTGCTGAAACGAACCCAGAAGAAGTAGAGACTCTTACAGAAGAGGAAGGCTaGTCTCTTCGAGGATACGCA | + |
|
Preference number: 4 (lower is better) Translates to: SGGSPDTAETNPEEVETLTEEEG*SLRGYA Trigger: TGCGTATCCTCGAAGAGAGCAGCCTTCCTCTTCTGT...AAGAGTCTCTACTTCTTCTGGGTTCGTTTCAGCAGTGTCTGGAGAGCCTCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062041.6 ENSMUST00000223205.2 |
||
| CDS-3UTR GCA 90 bp | GGGCATCAAGATGGGGAAGGTGGTGCCTTAGGGAAGTATCTTTGGAAGCTTAGACATGCCACCAGGAGCTaGCCAACAAGTGCAGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: GHQDGEGGALGKYLWKLRHATRS*PTSAEF Trigger: AAATTCTGCACTTGTTGGGCAGCTCCTGGTGGCATG...TCTAAGCTTCCAAAGATACTTCCCTAAGGCACCACCTTCCCCATCTTGATGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000223205.2 |
||
| CDS-3UTR CCA 90 bp | GGGCATCAAGATGGGGAAGGTGGTGCCTTAGGGAAGTATCTTTGGAAGCTTAGATTGAAAATTGATCTGTaGCGCGTGGCTCCAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GHQDGEGGALGKYLWKLRLKIDL*RVAPAS Trigger: TGAGGCTGGAGCCACGCGCCACAGATCAATTTTCAA...TCTAAGCTTCCAAAGATACTTCCCTAAGGCACCACCTTCCCCATCTTGATGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000223205.2 |
||
| 3UTR CAA 72 bp | TTCTGGGATGTCGCTCTATCCATACTAGGCAAGAGTTaGCCCACTAAGCCAATGTCCCAGCTCTCTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FWDVALSILGKS*PTKPMSQLSSS Trigger: AGAGGAAGAGAGCTGGGACATTGGCTTAGTGGGCAAACTCTTGCCTAGTATGGATAGAGCGACATCCCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062041.6 ENSMUST00000223205.2 |
||
| CDS-3UTR TCA 90 bp | AGCCTGCAGAACACAGAGAGAATTCCCTTTCTGTGTGCTGATTACATTCCCAGCGGGCTTTCAGTCCATTaGAAATTGATCTGTGGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: SLQNTERIPFLCADYIPSGLSVH*KLICGA Trigger: CGCGCCACAGATCAATTTTCAATGGACTGAAAGCCC...GCTGGGAATGTAATCAGCACACAGAAAGGGAATTCTCTCTGTGTTCTGCAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| CDS-3UTR TCA 90 bp | GATCTCCGTGGCTGCCAAACATCTGTCCACCTAAAATGTCTGGGATTTAACTGTAGTGAGTGGTCTAAGTaGCCATCAGCAGAGGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: DLRGCQTSVHLKCLGFNCSEWSK*PSAEGL Trigger: CAGTCCCTCTGCTGATGGTCACTTAGACCACTCACT...ACAGTTAAATCCCAGACATTTTAGGTGGACAGATGTTTGGCAGCCACGGAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| CDS-3UTR GCA 90 bp | ATGCACAAGGAGGGGGCATCAAGATGGGGAAGGTGGTGCCTTAGGGAAGTATCTAATCATGGCTTCAGCTaGACACAGGTCTTGTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: MHKEGASRWGRWCLREVSNHGFS*TQVLFV Trigger: TACAAACAAGACCTGTGTGCAGCTGAAGCCATGATT...AGATACTTCCCTAAGGCACCACCTTCCCCATCTTGATGCCCCCTCCTTGTGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000223205.2 |
||
| 3UTR CAA 72 bp | CAACCTGGAAAATCAGTAGTTGAGACAGTAATCTCCTaGCTGCTCACACTGCCCCTCTCCCTAAGCAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: QPGKSVVETVIS*LLTLPLSLSNA Trigger: TGCATTGCTTAGGGAGAGGGGCAGTGTGAGCAGCAAGGAGATTACTGTCTCAACTACTGATTTTCCAGGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| CDS-3UTR TCA 90 bp | GGCTCACCTGAGCGTTTCAATTTCACTTGCTGCAGTAGTGAACAGATTCTTTACCAGTCCATTGAAAATTaGTCTGTGGCGCGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSPERFNFTCCSSEQILYQSIEN*SVARGS Trigger: GGAGCCACGCGCCACAGATCAATTTTCAATGGACTG...GTAAAGAATCTGTTCACTACTGCAGCAAGTGAAATTGAAACGCTCAGGTGAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062041.6 ENSMUST00000223205.2 |
||
| CDS-3UTR TCA 90 bp | CTGCAGAACACAGAGAGAATTCCCTTTCTGTGTGCTGATTACATTCCCAGCACAAGTTTACAGTCTGGCTaGTCTTCTGCCAGGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LQNTERIPFLCADYIPSTSLQSG*SSARAF Trigger: GAAAGCCCTGGCAGAAGATCAGCCAGACTGTAAACT...TGTGCTGGGAATGTAATCAGCACACAGAAAGGGAATTCTCTCTGTGTTCTGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| CDS-3UTR TCA 90 bp | TGTTGTATGCACAAGGAGGGGGCATCAAGATGGGGAAGGTGGTGCCTTAGGGAACATCTTTTGTGTTCATaGCCACACAAATCTCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CCMHKEGASRWGRWCLREHLLCS*PHKSLV Trigger: CACAAGAGATTTGTGTGGTCATGAACACAAAAGATG...TTCCCTAAGGCACCACCTTCCCCATCTTGATGCCCCCTCCTTGTGCATACAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000223205.2 |
||
| CDS-3UTR GCA 90 bp | GGCTCACCTGAGCGTTTCAATTTCACTTGCTGCAGTAGTGAACAGATTCTTTACTCGAATTGCTCCTGCTaGCCCATGTTCCTTAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GSPERFNFTCCSSEQILYSNCSC*PMFLSC Trigger: GCAGCTAAGGAACATGGGGCAGCAGGAGCAATTCGA...GTAAAGAATCTGTTCACTACTGCAGCAAGTGAAATTGAAACGCTCAGGTGAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062041.6 |
||
| CDS-3UTR GCA 90 bp | AAATGTTGTATGCACAAGGAGGGGGCATCAAGATGGGGAAGGTGGTGCCTTAGGAATCATGGCTTCAGCTaGACACAGGTCTTGTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KCCMHKEGASRWGRWCLRNHGFS*TQVLFV Trigger: TACAAACAAGACCTGTGTGCAGCTGAAGCCATGATT...CCTAAGGCACCACCTTCCCCATCTTGATGCCCCCTCCTTGTGCATACAACATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000223205.2 |
||
| CDS-3UTR GCA 90 bp | AAATGTTGTATGCACAAGGAGGGGGCATCAAGATGGGGAAGGTGGTGCCTTAGGGAGCTGCCCAACAAGTaGAGAATTTCTTTCCTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: KCCMHKEGASRWGRWCLRELPNK*RISFLN Trigger: GTTAAGGAAAGAAATTCTGCACTTGTTGGGCAGCTC...CCTAAGGCACCACCTTCCCCATCTTGATGCCCCCTCCTTGTGCATACAACATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000223205.2 |
||
| CDS-3UTR TCA 90 bp | TATAAACCGTTCTGGTATCTACCCCATGGCTTCTTCCGTTTTCCCAGCATTAATCAGTCCATTGAAAATTaGTCTGTGGCGCGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YKPFWYLPHGFFRFPSINQSIEN*SVARGS Trigger: GGAGCCACGCGCCACAGATCAATTTTCAATGGACTG...ATTAATGCTGGGAAAACGGAAGAAGCCATGGGGTAGATACCAGAACGGTTTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| CDS-3UTR TCA 90 bp | CAGTGTTTACCAGCATGGTTTTCGTTTTCTTCTGGGATGTCGCTCTATCCATACAGTTTACAGTCTGGCTaGTCTTCTGCCAGGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QCLPAWFSFSSGMSLYPYSLQSG*SSARAF Trigger: GAAAGCCCTGGCAGAAGATCAGCCAGACTGTAAACT...GTATGGATAGAGCGACATCCCAGAAGAAAACGAAAACCATGCTGGTAAACACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062041.6 ENSMUST00000223205.2 |
||
| CDS-3UTR TCA 90 bp | GGTGGTGCCTTAGGGAAGTATCTTTGGAAGCTTAGAGATGATTTTTGTCTGTGTAGTGAGTGGTCTAAGTaGCCATCAGCAGAGGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: GGALGKYLWKLRDDFCLCSEWSK*PSAEGL Trigger: CAGTCCCTCTGCTGATGGTCACTTAGACCACTCACT...ACACAGACAAAAATCATCTCTAAGCTTCCAAAGATACTTCCCTAAGGCACCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 |
||
| CDS-3UTR TCA 90 bp | AAATGTTGTATGCACAAGGAGGGGGCATCAAGATGGGGAAGGTGGTGCCTTAGGCATCTTTTGTGTTCATaGCCACACAAATCTCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KCCMHKEGASRWGRWCLRHLLCS*PHKSLV Trigger: CACAAGAGATTTGTGTGGTCATGAACACAAAAGATG...CCTAAGGCACCACCTTCCCCATCTTGATGCCCCCTCCTTGTGCATACAACATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000223205.2 |
||
| CDS-3UTR TCA 90 bp | CTGAAGCGACTCAACTTTCAGGAGGCTCTCCAGACACTGCTGAAACGAACCCAGCAACATTCACACAGATaGAACTGTAACATTGCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LKRLNFQEALQTLLKRTQQHSHR*NCNIAL Trigger: TAGAGCAATGTTACAGTTTCATCTGTGTGAATGTTG...CTGGGTTCGTTTCAGCAGTGTCTGGAGAGCCTCCTGAAAGTTGAGTCGCTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062041.6 ENSMUST00000223205.2 |
||
| CDS-3UTR GCA 90 bp | CTTTTCAGAAGACCATGGGATGGATGGACTGAAGCGACTCAACTTTCAGGAGGCAATCATGGCTTCAGCTaGACACAGGTCTTGTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LFRRPWDGWTEATQLSGGNHGFS*TQVLFV Trigger: TACAAACAAGACCTGTGTGCAGCTGAAGCCATGATT...GCCTCCTGAAAGTTGAGTCGCTTCAGTCCATCCATCCCATGGTCTTCTGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062041.6 ENSMUST00000223205.2 |
||
| CDS-3UTR TCA 90 bp | GGTGGTGCCTTAGGGAAGTATCTTTGGAAGCTTAGAGATGATTTTTGTCTGTGTGGGCTTTCAGTCCATTaGAAATTGATCTGTGGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: GGALGKYLWKLRDDFCLCGLSVH*KLICGA Trigger: CGCGCCACAGATCAATTTTCAATGGACTGAAAGCCC...ACACAGACAAAAATCATCTCTAAGCTTCCAAAGATACTTCCCTAAGGCACCACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000223205.2 |
||
| CDS-3UTR TCA 90 bp | GGACCTAAAACAGGAAAGAAAGAGCATAGAAATGCCCAGCAGTTATTTGAGAACAGTGAGTGGTCTAAGTaGCCATCAGCAGAGGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: GPKTGKKEHRNAQQLFENSEWSK*PSAEGL Trigger: CAGTCCCTCTGCTGATGGTCACTTAGACCACTCACT...GTTCTCAAATAACTGCTGGGCATTTCTATGCTCTTTCTTTCCTGTTTTAGGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| CDS-3UTR TCA 90 bp | GGGCATCAAGATGGGGAAGGTGGTGCCTTAGGGAAGTATCTTTGGAAGCTTAGACATCTTTTGTGTTCATaGCCACACAAATCTCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GHQDGEGGALGKYLWKLRHLLCS*PHKSLV Trigger: CACAAGAGATTTGTGTGGTCATGAACACAAAAGATG...TCTAAGCTTCCAAAGATACTTCCCTAAGGCACCACCTTCCCCATCTTGATGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000223205.2 |
||
| CDS-3UTR TCA 90 bp | AAATGTTGTATGCACAAGGAGGGGGCATCAAGATGGGGAAGGTGGTGCCTTAGGCAACATTCACACAGATaGAACTGTAACATTGCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: KCCMHKEGASRWGRWCLRQHSHR*NCNIAL Trigger: TAGAGCAATGTTACAGTTTCATCTGTGTGAATGTTG...CCTAAGGCACCACCTTCCCCATCTTGATGCCCCCTCCTTGTGCATACAACATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000223205.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGGGTAACTAAAACACAGTCTCACAATTACAGAGAGCTCAGCTTTCCACATTTGAAAATTGATCTGTaGCGCGTGGCTCCAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRVTKTQSHNYRELSFPHLKIDL*RVAPAS Trigger: TGAGGCTGGAGCCACGCGCCACAGATCAATTTTCAA...ATGTGGAAAGCTGAGCTCTCTGTAATTGTGAGACTGTGTTTTAGTTACCCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| CDS-3UTR TCA 90 bp | GAAGACAGCCTTGTGCTTCCAGTAGAGGAACAGGGATATCAACCTACCCATAAGCATCTTTTGTGTTCATaGCCACACAAATCTCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: EDSLVLPVEEQGYQPTHKHLLCS*PHKSLV Trigger: CACAAGAGATTTGTGTGGTCATGAACACAAAAGATG...CTTATGGGTAGGTTGATATCCCTGTTCCTCTACTGGAAGCACAAGGCTGTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| CDS-3UTR GCA 90 bp | AGCCAACTGCTTGCCTACAACTCTAAAAGGAAGCTACACATCTGGGTCAAGGGCTATTTTAGAGCCAACTaGAAGCACTCTGTTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SQLLAYNSKRKLHIWVKGYFRAN*KHSVPN Trigger: ATTTGGAACAGAGTGCTTGCAGTTGGCTCTAAAATA...GCCCTTGACCCAGATGTGTAGCTTCCTTTTAGAGTTGTAGGCAAGCAGTTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| CDS-3UTR CCA 90 bp | GGACCTAAAACAGGAAAGAAAGAGCATAGAAATGCCCAGCAGTTATTTGAGAACTTGAAAATTGATCTGTaGCGCGTGGCTCCAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GPKTGKKEHRNAQQLFENLKIDL*RVAPAS Trigger: TGAGGCTGGAGCCACGCGCCACAGATCAATTTTCAA...GTTCTCAAATAACTGCTGGGCATTTCTATGCTCTTTCTTTCCTGTTTTAGGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| CDS-3UTR TCA 90 bp | CAATATAGTGATGAAAAGCAAGCATTATTCCCAAATACACGGTCATGTTCCTTGAGTGAGTGGTCTAAGTaGCCATCAGCAGAGGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: QYSDEKQALFPNTRSCSLSEWSK*PSAEGL Trigger: CAGTCCCTCTGCTGATGGTCACTTAGACCACTCACT...CAAGGAACATGACCGTGTATTTGGGAATAATGCTTGCTTTTCATCACTATATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| CDS-3UTR TCA 90 bp | TGGAGACATCCCCTTTCCTGTTTCTGCCCAGTGTTTACCAGCATGGTTTTCGTTCAACATTCACACAGATaGAACTGTAACATTGCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: WRHPLSCFCPVFTSMVFVQHSHR*NCNIAL Trigger: TAGAGCAATGTTACAGTTTCATCTGTGTGAATGTTG...AACGAAAACCATGCTGGTAAACACTGGGCAGAAACAGGAAAGGGGATGTCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062041.6 ENSMUST00000223205.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGACATCCCCTTTCCTGTTTCTGCCCAGTGTTTACCAGCATGGTTTTCGTTTATTTTAGAGCCAACTaGAAGCACTCTGTTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: WRHPLSCFCPVFTSMVFVYFRAN*KHSVPN Trigger: ATTTGGAACAGAGTGCTTGCAGTTGGCTCTAAAATA...AACGAAAACCATGCTGGTAAACACTGGGCAGAAACAGGAAAGGGGATGTCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062041.6 ENSMUST00000223205.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGTTTACCAGCATGGTTTTCGTTTTCTTCTGGGATGTCGCTCTATCCATACGAGCTGCCCAACAAGTaGAGAATTTCTTTCCTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: QCLPAWFSFSSGMSLYPYELPNK*RISFLN Trigger: GTTAAGGAAAGAAATTCTGCACTTGTTGGGCAGCTC...GTATGGATAGAGCGACATCCCAGAAGAAAACGAAAACCATGCTGGTAAACACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062041.6 ENSMUST00000223205.2 |
||
| 3UTR CAA 72 bp | AGGATCTTAGGGGAGGAAGAAATAGCAACATTTGGTTaGAGTGATTGGTGTGCTTTTGCAATGATGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RILGEEEIATFG*SDWCAFAMMLP Trigger: AGGCAGCATCATTGCAAAAGCACACCAATCACTCAAACCAAATGTTGCTATTTCTTCCTCCCCTAAGATCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| CDS-3UTR TCA 90 bp | AGGTTGTCTTTGTGTTATTCAAGTGTGTATTTCTGTACCTGCAGAGAGTTGAATAGTTTACAGTCTGGCTaGTCTTCTGCCAGGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RLSLCYSSVYFCTCRELNSLQSG*SSARAF Trigger: GAAAGCCCTGGCAGAAGATCAGCCAGACTGTAAACT...ATTCAACTCTCTGCAGGTACAGAAATACACACTTGAATAACACAAAGACAACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| CDS-3UTR GCA 90 bp | ATCCTTTTCTGGGTGGAGCCATTTTTATTAGACACATTATCTCATGGACACAAAACAGAAGAGGAAGGCTaGTCTCTTCGAGGATACGCA | + |
|
Preference number: 4 (lower is better) Translates to: ILFWVEPFLLDTLSHGHKTEEEG*SLRGYA Trigger: TGCGTATCCTCGAAGAGAGCAGCCTTCCTCTTCTGT...TTTGTGTCCATGAGATAATGTGTCTAATAAAAATGGCTCCACCCAGAAAAGGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000223205.2 |
||
| CDS-3UTR CCA 90 bp | CAATATAGTGATGAAAAGCAAGCATTATTCCCAAATACACGGTCATGTTCCTTGTTGAAAATTGATCTGTaGCGCGTGGCTCCAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QYSDEKQALFPNTRSCSLLKIDL*RVAPAS Trigger: TGAGGCTGGAGCCACGCGCCACAGATCAATTTTCAA...CAAGGAACATGACCGTGTATTTGGGAATAATGCTTGCTTTTCATCACTATATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| CDS-3UTR GCA 90 bp | AAACAGGAAAGAAAGAGCATAGAAATGCCCAGCAGTTATTTGAGAACAAGAGGGAATCATGGCTTCAGCTaGACACAGGTCTTGTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KQERKSIEMPSSYLRTRGNHGFS*TQVLFV Trigger: TACAAACAAGACCTGTGTGCAGCTGAAGCCATGATT...CCCTCTTGTTCTCAAATAACTGCTGGGCATTTCTATGCTCTTTCTTTCCTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| CDS-3UTR GCA 90 bp | GGTGGTGCCTTAGGGAAGTATCTTTGGAAGCTTAGAGATGATTTTTGTCTGTGTTATTTTAGAGCCAACTaGAAGCACTCTGTTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GGALGKYLWKLRDDFCLCYFRAN*KHSVPN Trigger: ATTTGGAACAGAGTGCTTGCAGTTGGCTCTAAAATA...ACACAGACAAAAATCATCTCTAAGCTTCCAAAGATACTTCCCTAAGGCACCACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000223205.2 |
||
| 3UTR CAA 72 bp | CACTTCCTCCTCAAAGGCCTCTATCCTCTTATAAGATaGGATTTAAGGTCATTTCCTTGTGCTTTGTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: HFLLKGLYPLIR*DLRSFPCALSM Trigger: CATAGACAAAGCACAAGGAAATGACCTTAAATCCAATCTTATAAGAGGATAGAGGCCTTTGAGGAGGAAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| CDS-3UTR GCA 90 bp | ATCCTTTTCTGGGTGGAGCCATTTTTATTAGACACATTATCTCATGGACACAAAGAGCTGCCCAACAAGTaGAGAATTTCTTTCCTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: ILFWVEPFLLDTLSHGHKELPNK*RISFLN Trigger: GTTAAGGAAAGAAATTCTGCACTTGTTGGGCAGCTC...TTTGTGTCCATGAGATAATGTGTCTAATAAAAATGGCTCCACCCAGAAAAGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000223205.2 |
||
| 3UTR CAA 72 bp | CTATCCTCTTATAAGATTGGATTTAAGGTCATTTCCTaGTGCTTTGTCTATGTTAGGATAGACAGGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSSYKIGFKVIS*CFVYVRIDRAC Trigger: GCAAGCCCTGTCTATCCTAACATAGACAAAGCACAAGGAAATGACCTTAAATCCAATCTTATAAGAGGATAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| CDS-3UTR GCA 90 bp | ATCCTTTTCTGGGTGGAGCCATTTTTATTAGACACATTATCTCATGGACACAAATATTTTAGAGCCAACTaGAAGCACTCTGTTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ILFWVEPFLLDTLSHGHKYFRAN*KHSVPN Trigger: ATTTGGAACAGAGTGCTTGCAGTTGGCTCTAAAATA...TTTGTGTCCATGAGATAATGTGTCTAATAAAAATGGCTCCACCCAGAAAAGGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000223205.2 |
||
| CDS-3UTR GCA 90 bp | ATACAGGCTAGAATTTGGTATTGTTATTTTTATGAAGCACCCCCAGTATCAACATATTTTAGAGCCAACTaGAAGCACTCTGTTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: IQARIWYCYFYEAPPVSTYFRAN*KHSVPN Trigger: ATTTGGAACAGAGTGCTTGCAGTTGGCTCTAAAATA...TGTTGATACTGGGGGTGCTTCATAAAAATAACAATACCAAATTCTAGCCTGTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| CDS-3UTR CAA 90 bp | GTGGCACTGAGGGGGCACCTCAGTGGTGTGTGTGGCTTTGGGTACTACCAGACATCGCTTGCCCTATGCTaGGCACGGTCCAGTGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VALRGHLSGVCGFGYYQTSLALC*ARSSEW Trigger: CCACTCACTGGACCGTGCCAAGCATAGGGCAAGCGA...TGTCTGGTAGTACCCAAAGCCACACACACCACTGAGGTGCCCCCTCAGTGCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| CDS-3UTR CAA 90 bp | ATGCACAAGGAGGGGGCATCAAGATGGGGAAGGTGGTGCCTTAGGGAAGTATCTTCGCTTGCCCTATGCTaGGCACGGTCCAGTGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: MHKEGASRWGRWCLREVSSLALC*ARSSEW Trigger: CCACTCACTGGACCGTGCCAAGCATAGGGCAAGCGA...AGATACTTCCCTAAGGCACCACCTTCCCCATCTTGATGCCCCCTCCTTGTGCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 |
||
| CDS-3UTR CAA 90 bp | GATGGATGGACTGAAGCGACTCAACTTTCAGGAGGCTCTCCAGACACTGCTGAATCGCTTGCCCTATGCTaGGCACGGTCCAGTGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: DGWTEATQLSGGSPDTAESLALC*ARSSEW Trigger: CCACTCACTGGACCGTGCCAAGCATAGGGCAAGCGA...TTCAGCAGTGTCTGGAGAGCCTCCTGAAAGTTGAGTCGCTTCAGTCCATCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062041.6 |
||
| CDS TCA 90 bp | ATTTCGCTTGCCCTATGCTTGGCACGGTCCAGTGAGTGGTCTAAGTaGCCATCAGCAGAGGGACTGATGACAGTGGACACCAGAGGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: ISLALCLARSSEWSK*PSAEGLMTVDTRGR Trigger: TCGACCTCTGGTGTCCACTGTCATCAGTCCCTCTGCTGATGGTCACTTAGACCACTCACTGGACCGTGCCAAGCATAGGGCAAGCGAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000062041.6 ENSMUST00000220519.2 ENSMUST00000221177.2 ENSMUST00000221452.2 ENSMUST00000221895.2 ENSMUST00000223068.2 |
||
| CDS-3UTR CAA 90 bp | TGTTGTATGCACAAGGAGGGGGCATCAAGATGGGGAAGGTGGTGCCTTAGGGAAACACCAGAGGTCGAATaGCTCCTGCTGCCCCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: CCMHKEGASRWGRWCLRETPEVE*LLLPHV Trigger: AACATGGGGCAGCAGGAGCAATTCGACCTCTGGTGT...TTCCCTAAGGCACCACCTTCCCCATCTTGATGCCCCCTCCTTGTGCATACAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 |
||
| CDS-3UTR CAA 90 bp | AGCCAACTGCTTGCCTACAACTCTAAAAGGAAGCTACACATCTGGGTCAAGGGCTCGCTTGCCCTATGCTaGGCACGGTCCAGTGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SQLLAYNSKRKLHIWVKGSLALC*ARSSEW Trigger: CCACTCACTGGACCGTGCCAAGCATAGGGCAAGCGA...GCCCTTGACCCAGATGTGTAGCTTCCTTTTAGAGTTGTAGGCAAGCAGTTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| CDS-3UTR CAA 90 bp | AAATGTTGTATGCACAAGGAGGGGGCATCAAGATGGGGAAGGTGGTGCCTTAGGACACCAGAGGTCGAATaGCTCCTGCTGCCCCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: KCCMHKEGASRWGRWCLRTPEVE*LLLPHV Trigger: AACATGGGGCAGCAGGAGCAATTCGACCTCTGGTGT...CCTAAGGCACCACCTTCCCCATCTTGATGCCCCCTCCTTGTGCATACAACATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 |
||
| CDS GCA 90 bp | GCTGACAGTCACAAGGTTGAACACACCTTTAATCATGGCTTCAGCTaGACACAGGTCTTGTTTGTAGGTCACCTTCCAGAGGGCAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ADSHKVEHTFNHGFS*TQVLFVGHLPEGRG Trigger: CCCCCTGCCCTCTGGAAGGTGACCTACAAACAAGACCTGTGTGCAGCTGAAGCCATGATTAAAGGTGTGTTCAACCTTGTGACTGTCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
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| CDS-3UTR CAA 90 bp | GAAGACAGCCTTGTGCTTCCAGTAGAGGAACAGGGATATCAACCTACCCATAAGACACCAGAGGTCGAATaGCTCCTGCTGCCCCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: EDSLVLPVEEQGYQPTHKTPEVE*LLLPHV Trigger: AACATGGGGCAGCAGGAGCAATTCGACCTCTGGTGT...CTTATGGGTAGGTTGATATCCCTGTTCCTCTACTGGAAGCACAAGGCTGTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| CDS-3UTR CAA 90 bp | AGCCTGCAGAACACAGAGAGAATTCCCTTTCTGTGTGCTGATTACATTCCCAGCACACCAGAGGTCGAATaGCTCCTGCTGCCCCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: SLQNTERIPFLCADYIPSTPEVE*LLLPHV Trigger: AACATGGGGCAGCAGGAGCAATTCGACCTCTGGTGT...GCTGGGAATGTAATCAGCACACAGAAAGGGAATTCTCTCTGTGTTCTGCAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| CDS-3UTR CAA 90 bp | GATGGATGGACTGAAGCGACTCAACTTTCAGGAGGCTCTCCAGACACTGCTGAAAGCTGCACACAGGTCTaGTTTGTAGGTCACCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: DGWTEATQLSGGSPDTAESCTQV*FVGHLP Trigger: TGGAAGGTGACCTACAAACAAGACCTGTGTGCAGCT...TTCAGCAGTGTCTGGAGAGCCTCCTGAAAGTTGAGTCGCTTCAGTCCATCCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062041.6 ENSMUST00000223205.2 |
||
| CDS-3UTR CAA 90 bp | GATCTCCGTGGCTGCCAAACATCTGTCCACCTAAAATGTCTGGGATTTAACTGTACACCAGAGGTCGAATaGCTCCTGCTGCCCCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: DLRGCQTSVHLKCLGFNCTPEVE*LLLPHV Trigger: AACATGGGGCAGCAGGAGCAATTCGACCTCTGGTGT...ACAGTTAAATCCCAGACATTTTAGGTGGACAGATGTTTGGCAGCCACGGAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
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| CDS TCA 90 bp | ACTTCCTTTGCTAACCCCCTAATCCACACCAGGCTTTCCATCTTCTaGGCGAGTGGCACTGACGTGAAGTCAAAGCAGTGTACCAAAACA | + |
|
Preference number: 5 (lower is better) Translates to: TSFANPLIHTRLSIF*ASGTDVKSKQCTKT Trigger: TGTTTTGGTACACTGCTTTGACTTCACGTCAGTGCCACTCGCTCAGAAGATGGAAAGCCTGGTGTGGATTAGGGGGTTAGCAAAGGAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000221452.2 ENSMUST00000223205.2 |
||
| CDS-3UTR CAA 90 bp | GGACCTAAAACAGGAAAGAAAGAGCATAGAAATGCCCAGCAGTTATTTGAGAACTCGCTTGCCCTATGCTaGGCACGGTCCAGTGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GPKTGKKEHRNAQQLFENSLALC*ARSSEW Trigger: CCACTCACTGGACCGTGCCAAGCATAGGGCAAGCGA...GTTCTCAAATAACTGCTGGGCATTTCTATGCTCTTTCTTTCCTGTTTTAGGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| CDS-3UTR CAA 90 bp | TGTTGTATGCACAAGGAGGGGGCATCAAGATGGGGAAGGTGGTGCCTTAGGGAAGCCCTTCTACAAGTTTaGCTTTCCTGTGACAGTATT | + |
|
Preference number: 5 (lower is better) Translates to: CCMHKEGASRWGRWCLREALLQV*LSCDSI Trigger: AATACTGTCACAGGAAAGCAAAACTTGTAGAAGGGC...TTCCCTAAGGCACCACCTTCCCCATCTTGATGCCCCCTCCTTGTGCATACAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000223205.2 |
||
| CDS-3UTR CAA 90 bp | GCGGCTGAGCTTGAGAACTCTGACTGGAACCATAGAGCCTGCAGAACACAGAGAGCCCTTCTACAAGTTTaGCTTTCCTGTGACAGTATT | + |
|
Preference number: 5 (lower is better) Translates to: AAELENSDWNHRACRTQRALLQV*LSCDSI Trigger: AATACTGTCACAGGAAAGCAAAACTTGTAGAAGGGC...TCTCTGTGTTCTGCAGGCTCTATGGTTCCAGTCAGAGTTCTCAAGCTCAGCCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| CDS-3UTR CAA 90 bp | AGCCTGCAGAACACAGAGAGAATTCCCTTTCTGTGTGCTGATTACATTCCCAGCAGCTGCACACAGGTCTaGTTTGTAGGTCACCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLQNTERIPFLCADYIPSSCTQV*FVGHLP Trigger: TGGAAGGTGACCTACAAACAAGACCTGTGTGCAGCT...GCTGGGAATGTAATCAGCACACAGAAAGGGAATTCTCTCTGTGTTCTGCAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| CDS-3UTR CAA 90 bp | GCCTGCAGAACACAGAGAGAATTCCCTTTCTGTGTGCTGATTACATTCCCAGCAAGCTGCACACAGGTCTaGTTTGTAGGTCACCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ACRTQREFPFCVLITFPASCTQV*FVGHLP Trigger: TGGAAGGTGACCTACAAACAAGACCTGTGTGCAGCT...TGCTGGGAATGTAATCAGCACACAGAAAGGGAATTCTCTCTGTGTTCTGCAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| CDS-3UTR CAA 90 bp | GGGCATCAAGATGGGGAAGGTGGTGCCTTAGGGAAGTATCTTTGGAAGCTTAGAGCCCTTCTACAAGTTTaGCTTTCCTGTGACAGTATT | + |
|
Preference number: 5 (lower is better) Translates to: GHQDGEGGALGKYLWKLRALLQV*LSCDSI Trigger: AATACTGTCACAGGAAAGCAAAACTTGTAGAAGGGC...TCTAAGCTTCCAAAGATACTTCCCTAAGGCACCACCTTCCCCATCTTGATGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000223205.2 |
||
| CDS-3UTR CAA 90 bp | TGGAGACATCCCCTTTCCTGTTTCTGCCCAGTGTTTACCAGCATGGTTTTCGTTGCCCTTCTACAAGTTTaGCTTTCCTGTGACAGTATT | + |
|
Preference number: 5 (lower is better) Translates to: WRHPLSCFCPVFTSMVFVALLQV*LSCDSI Trigger: AATACTGTCACAGGAAAGCAAAACTTGTAGAAGGGC...AACGAAAACCATGCTGGTAAACACTGGGCAGAAACAGGAAAGGGGATGTCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062041.6 ENSMUST00000223205.2 |
||
| CDS-3UTR CAA 90 bp | GGTGGTGCCTTAGGGAAGTATCTTTGGAAGCTTAGAGATGATTTTTGTCTGTGTAGCTGCACACAGGTCTaGTTTGTAGGTCACCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GGALGKYLWKLRDDFCLCSCTQV*FVGHLP Trigger: TGGAAGGTGACCTACAAACAAGACCTGTGTGCAGCT...ACACAGACAAAAATCATCTCTAAGCTTCCAAAGATACTTCCCTAAGGCACCACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000223205.2 |
||
| CDS TCA 90 bp | TCATGGATAATCACCACTTCTGGCTTAGTGAGTTTACAGTCTGGCTaGTCTTCTGCCAGGGCTTTCAGTCCATTGAAAATTGATCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SWIITTSGLVSLQSG*SSARAFSPLKIDLW Trigger: CCACAGATCAATTTTCAATGGACTGAAAGCCCTGGCAGAAGATCAGCCAGACTGTAAACTCACTAAGCCAGAAGTGGTGATTATCCATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000062041.6 ENSMUST00000220519.2 ENSMUST00000221177.2 ENSMUST00000221452.2 ENSMUST00000221895.2 ENSMUST00000223068.2 ENSMUST00000223205.2 |
||
| CDS GCA 90 bp | AGCAGTGTACCAAAACAACAACTACAGGATACAGAAGAGGAAGGCTaGTCTCTTCGAGGATACGCAGTAACTTCCTGGTTTCTTGACTAT | + |
|
Preference number: 5 (lower is better) Translates to: SSVPKQQLQDTEEEG*SLRGYAVTSWFLDY Trigger: ATAGTCAAGAAACCAGGAAGTTACTGCGTATCCTCGAAGAGAGCAGCCTTCCTCTTCTGTATCCTGTAGTTGTTGTTTTGGTACACTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000221452.2 ENSMUST00000223205.2 |
||
| CDS-3UTR CAA 90 bp | CTGCAGAACACAGAGAGAATTCCCTTTCTGTGTGCTGATTACATTCCCAGCACAGCCCTTCTACAAGTTTaGCTTTCCTGTGACAGTATT | + |
|
Preference number: 5 (lower is better) Translates to: LQNTERIPFLCADYIPSTALLQV*LSCDSI Trigger: AATACTGTCACAGGAAAGCAAAACTTGTAGAAGGGC...TGTGCTGGGAATGTAATCAGCACACAGAAAGGGAATTCTCTCTGTGTTCTGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
||
| CDS-3UTR CAA 90 bp | GGACCTAAAACAGGAAAGAAAGAGCATAGAAATGCCCAGCAGTTATTTGAGAACGCCCTTCTACAAGTTTaGCTTTCCTGTGACAGTATT | + |
|
Preference number: 5 (lower is better) Translates to: GPKTGKKEHRNAQQLFENALLQV*LSCDSI Trigger: AATACTGTCACAGGAAAGCAAAACTTGTAGAAGGGC...GTTCTCAAATAACTGCTGGGCATTTCTATGCTCTTTCTTTCCTGTTTTAGGTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| CDS-3UTR CAA 90 bp | ATACAGGCTAGAATTTGGTATTGTTATTTTTATGAAGCACCCCCAGTATCAACAAGCTGCACACAGGTCTaGTTTGTAGGTCACCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: IQARIWYCYFYEAPPVSTSCTQV*FVGHLP Trigger: TGGAAGGTGACCTACAAACAAGACCTGTGTGCAGCT...TGTTGATACTGGGGGTGCTTCATAAAAATAACAATACCAAATTCTAGCCTGTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000221895.2 |
||
| CDS GCA 72 bp | CGCGTGGCTCCAGCCTCAGCTAGTGAGATGCGCTTATaGCCATACCTCTGGATGATACTTCTCATTGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: RVAPASASEMRL*PYLWMILLIAS Trigger: GGAAGCAATGAGAAGTATCATCCAGAGGTATGGGCATAAGCGCATCTCACTAGCTGAGGCTGGAGCCACGCG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000062041.6 ENSMUST00000220519.2 ENSMUST00000221177.2 ENSMUST00000221452.2 ENSMUST00000221895.2 ENSMUST00000223068.2 ENSMUST00000223205.2 |
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| CDS CCA 72 bp | AGAGAAAAGCCTGGGGCATTTCGCTTGCCCTATGCTTaGCACGGTCCAGTGAGTGGTCTAAGTGACCATCAG | + |
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Preference number: 6 (lower is better) Translates to: REKPGAFRLPYA*HGPVSGLSDHQ Trigger: CTGATGGTCACTTAGACCACTCACTGGACCGTGCCAAGCATAGGGCAAGCGAAATGCCCCAGGCTTTTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000062041.6 ENSMUST00000220519.2 ENSMUST00000221177.2 ENSMUST00000221452.2 ENSMUST00000221895.2 ENSMUST00000223068.2 |
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| CDS CCA 72 bp | GCCTCAGCTAGTGAGATGCGCTTATGCCCATACCTCTaGATGATACTTCTCATTGCTTCCATGTTCTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: ASASEMRLCPYL*MILLIASMFSP Trigger: AGGGGAGAACATGGAAGCAATGAGAAGTATCATCCAGAGGTATGGGCATAAGCGCATCTCACTAGCTGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000062041.6 ENSMUST00000220519.2 ENSMUST00000221452.2 ENSMUST00000221895.2 ENSMUST00000223205.2 |
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| CDS TCA 72 bp | CAGCTAGTGAGATGCGCTTATGCCCATACCTCTGGATaGTACTTCTCATTGCTTCCATGTTCTCCCCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: QLVRCAYAHTSG*YFSLLPCSPLS Trigger: TGACAGGGGAGAACATGGAAGCAATGAGAAGTATCATCCAGAGGTATGGGCATAAGCGCATCTCACTAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000062041.6 ENSMUST00000220519.2 ENSMUST00000221452.2 ENSMUST00000221895.2 ENSMUST00000223205.2 |
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| CDS GCA 72 bp | CACAAGGTTGAACACACCTTTAATCATGGCTTCAGCTaGACACAGGTCTTGTTTGTAGGTCACCTTCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: HKVEHTFNHGFS*TQVLFVGHLPE Trigger: CTCTGGAAGGTGACCTACAAACAAGACCTGTGTGCAGCTGAAGCCATGATTAAAGGTGTGTTCAACCTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220519.2 ENSMUST00000223068.2 |
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| CDS CCA 72 bp | AAAAGGTCTCACGGCGTCATGGATAATCACCACTTCTaGCTTAGTGAGTTTACAGTCTGGCTGATCTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: KRSHGVMDNHHF*LSEFTVWLIFC Trigger: GCAGAAGATCAGCCAGACTGTAAACTCACTAAGCCAGAAGTGGTGATTATCCATGACGCCGTGAGACCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000062041.6 ENSMUST00000220519.2 ENSMUST00000221177.2 ENSMUST00000221452.2 ENSMUST00000221895.2 ENSMUST00000223068.2 ENSMUST00000223205.2 |
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| CDS GCA 72 bp | CCAAAACAACAACTACAGGATACAGAAGAGGAAGGCTaGTCTCTTCGAGGATACGCAGTAACTTCCTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: PKQQLQDTEEEG*SLRGYAVTSWF Trigger: AAACCAGGAAGTTACTGCGTATCCTCGAAGAGAGCAGCCTTCCTCTTCTGTATCCTGTAGTTGTTGTTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000221452.2 ENSMUST00000223205.2 |
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| CDS CCA 72 bp | AGGATATCTTCCTCAACAAAAGGTCTCACGGCGTCATaGATAATCACCACTTCTGGCTTAGTGAGTTTACAG | + |
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Preference number: 6 (lower is better) Translates to: RISSSTKGLTAS*IITTSGLVSLQ Trigger: CTGTAAACTCACTAAGCCAGAAGTGGTGATTATCCATGACGCCGTGAGACCTTTTGTTGAGGAAGATATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000062041.6 ENSMUST00000220519.2 ENSMUST00000221177.2 ENSMUST00000221452.2 ENSMUST00000221895.2 ENSMUST00000223068.2 ENSMUST00000223205.2 |
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| CDS CAA 90 bp | TTGACTATCAGGGGACACAACATTCACACAGATGAAACTGTAACATaGCTCTATGAAGTTCCTAATGTCTCCGCCTATGTGATCCATAAC | + |
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Preference number: 6 (lower is better) Translates to: LTIRGHNIHTDETVT*LYEVPNVSAYVIHN Trigger: GTTATGGATCACATAGGCGGAGACATTAGGAACTTCATAGAGCAATGTTACAGTTTCATCTGTGTGAATGTTGTGTCCCCTGATAGTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062041.6 ENSMUST00000221177.2 ENSMUST00000221452.2 ENSMUST00000223205.2 |
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