RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CRP (Mus musculus)

Ensembl gene IDs: ENSMUSG00000037942

Ensembl transcript IDs: ENSMUST00000038495.5

Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAAGACAGAACCCTATATGAAGAGCTAGAGGTAATCAGTGGCTGCTaGGAAAAGGACAATCAGTCTTCAGGGAGGGGCCCTCCTGATAGA +
Preference number: 1 (lower is better)
Translates to: KDRTLYEELEVISGC*EKDNQSSGRGPPDR
Trigger: TCTATCAGGAGGGCCCCTCCCTGAAGACTGATTGTCCTTTTCTCAGCAGCCACTGATTACCTCTAGCTCTTCATATAGGGTTCTGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038495.5
3UTR TCA 90 bp CATCACTCTAGGTTGCCCAAACAAGACCTGCATAATGACACCAATTaGCATGCAACATGGACAGAAGAAATTTCACAAAGACAGAACCCT +
Preference number: 1 (lower is better)
Translates to: HHSRLPKQDLHNDTN*HATWTEEISQRQNP
Trigger: AGGGTTCTGTCTTTGTGAAATTTCTTCTGTCCATGTTGCATGTCAATTGGTGTCATTATGCAGGTCTTGTTTGGGCAACCTAGAGTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038495.5
3UTR-3UTR GCA 90 bp GCTGCTGAGAAAAGGACAATCAGTCTTCAGGGAGGGGCCCTCCTGATAGATTATTGTAATCCCAGGAGGTaGTTCAGGGCTCACAACAGT +
Preference number: 2 (lower is better)
Translates to: AAEKRTISLQGGALLIDYCNPRR*FRAHNS
Trigger: ACTGTTGTGAGCCCTGAAGCACCTCCTGGGATTACA...ATAATCTATCAGGAGGGCCCCTCCCTGAAGACTGATTGTCCTTTTCTCAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038495.5
3UTR-3UTR GCA 90 bp GCTGCTGAGAAAAGGACAATCAGTCTTCAGGGAGGGGCCCTCCTGATAGATTATAGAGTCCTAGTGGGATaGTTATGCTGGAAGCCTTCC +
Preference number: 2 (lower is better)
Translates to: AAEKRTISLQGGALLIDYRVLVG*LCWKPS
Trigger: GGAAGGCTTCCAGCATAAGCATCCCACTAGGACTCT...ATAATCTATCAGGAGGGCCCCTCCCTGAAGACTGATTGTCCTTTTCTCAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038495.5
3UTR TCA 72 bp ACCCTATATGAAGAGCTAGAGGTAATCAGTGGCTGCTaGGAAAAGGACAATCAGTCTTCAGGGAGGGGCCCT +
Preference number: 3 (lower is better)
Translates to: TLYEELEVISGC*EKDNQSSGRGP
Trigger: AGGGCCCCTCCCTGAAGACTGATTGTCCTTTTCTCAGCAGCCACTGATTACCTCTAGCTCTTCATATAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038495.5
3UTR GCA 72 bp CAGTGCTCCATCACTCTAGGTTGCCCAAACAAGACCTaGATAATGACACCAATTGACATGCAACATGGACAG +
Preference number: 3 (lower is better)
Translates to: QCSITLGCPNKT*IMTPIDMQHGQ
Trigger: CTGTCCATGTTGCATGTCAATTGGTGTCATTATGCAGGTCTTGTTTGGGCAACCTAGAGTGATGGAGCACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038495.5
3UTR TCA 72 bp AGGTTGCCCAAACAAGACCTGCATAATGACACCAATTaGCATGCAACATGGACAGAAGAAATTTCACAAAGA +
Preference number: 3 (lower is better)
Translates to: RLPKQDLHNDTN*HATWTEEISQR
Trigger: TCTTTGTGAAATTTCTTCTGTCCATGTTGCATGTCAATTGGTGTCATTATGCAGGTCTTGTTTGGGCAACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038495.5
CDS-3UTR GCA 90 bp GCTAAAAGGTTCATAACCCGAGACAAGGGAGAGAATGTAATCCCAGGAGGTGCTCCGCCATACGAGTCCTaGTCCTGCCCCAAGATGATG +
Preference number: 4 (lower is better)
Translates to: AKRFITRDKGENVIPGGAPPYES*SCPKMM
Trigger: CATCATCTTGGGGCAGGAGCAGGACTCGTATGGCGG...AGCACCTCCTGGGATTACATTCTCTCCCTTGTCTCGGGTTATGAACCTTTTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038495.5
CDS-3UTR TCA 90 bp GCTGCTGAGAAAAGGACAATCAGTCTTCAGGGAGGGGCCCTCCTGATAGATTATGTTCAGTGGCTTCTTTaGCTCTGCTTCCAGAGACAC +
Preference number: 4 (lower is better)
Translates to: AAEKRTISLQGGALLIDYVQWLL*LCFQRH
Trigger: GTGTCTCTGGAAGCAGAGTCAAAGAAGCCACTGAAC...ATAATCTATCAGGAGGGCCCCTCCCTGAAGACTGATTGTCCTTTTCTCAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038495.5
CDS-3UTR GCA 90 bp GCTAAAAGGTTCATAACCCGAGACAAGGGAGAGAATGTAATCCCAGGAGGTGCTTACGAGTCCTGCTCCTaGCCCAAGATGATGCTTGCA +
Preference number: 4 (lower is better)
Translates to: AKRFITRDKGENVIPGGAYESCS*PKMMLA
Trigger: TGCAAGCATCATCTTGGGGCAGGAGCAGGACTCGTA...AGCACCTCCTGGGATTACATTCTCTCCCTTGTCTCGGGTTATGAACCTTTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038495.5
CDS-3UTR GCA 90 bp GCTGCTGAGAAAAGGACAATCAGTCTTCAGGGAGGGGCCCTCCTGATAGATTATCACCAAAGACTGCTTTaGATCAAAGTCACCGCCATA +
Preference number: 4 (lower is better)
Translates to: AAEKRTISLQGGALLIDYHQRLL*IKVTAI
Trigger: TATGGCGGTGACTTTGATGCAAAGCAGTCTTTGGTG...ATAATCTATCAGGAGGGCCCCTCCCTGAAGACTGATTGTCCTTTTCTCAGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038495.5
CDS-3UTR GCA 90 bp GCTAAAAGGTTCATAACCCGAGACAAGGGAGAGAATGTAATCCCAGGAGGTGCTAAACACATCACCCTGTaGTTTATAGTTCAGTGCCCG +
Preference number: 4 (lower is better)
Translates to: AKRFITRDKGENVIPGGAKHITL*FIVQCP
Trigger: CGGGCACTGAACTATAAAGCACAGGGTGATGTGTTT...AGCACCTCCTGGGATTACATTCTCTCCCTTGTCTCGGGTTATGAACCTTTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038495.5
CDS-3UTR TCA 90 bp GCTGCTGAGAAAAGGACAATCAGTCTTCAGGGAGGGGCCCTCCTGATAGATTATTTAAACATGTCTTCATaGCCAAAAGTCCGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: AAEKRTISLQGGALLIDYLNMSS*PKVREK
Trigger: CTTCTCTCGGACTTTTGGTCATGAAGACATGTTTAA...ATAATCTATCAGGAGGGCCCCTCCCTGAAGACTGATTGTCCTTTTCTCAGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000038495.5
CDS-3UTR TCA 90 bp GCTAAAAGGTTCATAACCCGAGACAAGGGAGAGAATGTAATCCCAGGAGGTGCTCACATAGGAAGTATCTaGCTCCTTGGGAAATACAAA +
Preference number: 4 (lower is better)
Translates to: AKRFITRDKGENVIPGGAHIGSI*LLGKYK
Trigger: TTTGTATTTCCCAAGGAGTCAGATACTTCCTATGTG...AGCACCTCCTGGGATTACATTCTCTCCCTTGTCTCGGGTTATGAACCTTTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038495.5
CDS-3UTR GCA 90 bp GCTAAAAGGTTCATAACCCGAGACAAGGGAGAGAATGTAATCCCAGGAGGTGCTTGCTTTATAGTTCAGTaGCCGCCAGTTCAAAACATT +
Preference number: 4 (lower is better)
Translates to: AKRFITRDKGENVIPGGACFIVQ*PPVQNI
Trigger: AATGTTTTGAACTGGCGGGCACTGAACTATAAAGCA...AGCACCTCCTGGGATTACATTCTCTCCCTTGTCTCGGGTTATGAACCTTTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038495.5
CDS-3UTR CAA 90 bp GCTGCTGAGAAAAGGACAATCAGTCTTCAGGGAGGGGCCCTCCTGATAGATTATTGGCACAGATGTGTGTaGGAGCCTCAGGAATCTCTG +
Preference number: 5 (lower is better)
Translates to: AAEKRTISLQGGALLIDYWHRCV*EPQESL
Trigger: CAGAGATTCCTGAGGCTCCAACACACATCTGTGCCA...ATAATCTATCAGGAGGGCCCCTCCCTGAAGACTGATTGTCCTTTTCTCAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038495.5
CDS-3UTR CAA 90 bp GCTGCTGAGAAAAGGACAATCAGTCTTCAGGGAGGGGCCCTCCTGATAGATTATAGACTTTTCCGCACCTaGGGTTTCCCATCAATCCAG +
Preference number: 5 (lower is better)
Translates to: AAEKRTISLQGGALLIDYRLFRT*GFPSIQ
Trigger: CTGGATTGATGGGAAACCCAAGGTGCGGAAAAGTCT...ATAATCTATCAGGAGGGCCCCTCCCTGAAGACTGATTGTCCTTTTCTCAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000038495.5
CDS-3UTR CAA 90 bp GCTGCTGAGAAAAGGACAATCAGTCTTCAGGGAGGGGCCCTCCTGATAGATTATCCACCAAAGACTGCTTaGCATCAAAGTCACCGCCAT +
Preference number: 5 (lower is better)
Translates to: AAEKRTISLQGGALLIDYPPKTA*HQSHRH
Trigger: ATGGCGGTGACTTTGATGCAAAGCAGTCTTTGGTGG...ATAATCTATCAGGAGGGCCCCTCCCTGAAGACTGATTGTCCTTTTCTCAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038495.5
CDS TCA 90 bp AGACTCCCAGCTGGCACAGATGTGTGTTGGAGCCTCAGGAATCTCTaGAACCATGAATCGTACTTCAGCACCACCCACTCCAAAAGTATA +
Preference number: 5 (lower is better)
Translates to: RLPAGTDVCWSLRNL*NHESYFSTTHSKSI
Trigger: TATACTTTTGGAGTGGGTGGTGCTGAAGTACGATTCATGGTTTCAGAGATTCCTGAGGCTCCAACACACATCTGTGCCAGCTGGGAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038495.5
CDS GCA 90 bp CAGCTGCGGCTTAATAAACACATCACCCTGTGCTTTATAGTTCAGTaGCCGCCAGTTCAAAACATTGGGGCTGAGTGTCCCACCAACATA +
Preference number: 5 (lower is better)
Translates to: QLRLNKHITLCFIVQ*PPVQNIGAECPTNI
Trigger: TATGTTGGTGGGACACTCAGCCCCAATGTTTTGAACTGGCGGGCACTGAACTATAAAGCACAGGGTGATGTGTTTATTAAGCCGCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038495.5
CDS-3UTR CAA 90 bp GCTGCTGAGAAAAGGACAATCAGTCTTCAGGGAGGGGCCCTCCTGATAGATTATGAAGTATCTGACTCCTaGGGAAATACAAAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: AAEKRTISLQGGALLIDYEVSDS*GNTKAF
Trigger: AAAGGCCTTTGTATTTCCCAAGGAGTCAGATACTTC...ATAATCTATCAGGAGGGCCCCTCCCTGAAGACTGATTGTCCTTTTCTCAGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038495.5
CDS TCA 90 bp TCTGACTCCTTGGGAAATACAAAGGCCTTTTTAAACATGTCTTCATaGCCAAAAGTCCGAGAGAAGCTGATCATGATCAGAAGGCACCAG +
Preference number: 5 (lower is better)
Translates to: SDSLGNTKAFLNMSS*PKVREKLIMIRRHQ
Trigger: CTGGTGCCTTCTGATCATGATCAGCTTCTCTCGGACTTTTGGTCATGAAGACATGTTTAAAAAGGCCTTTGTATTTCCCAAGGAGTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000038495.5
CDS GCA 72 bp GACTGCTTTGCATCAAAGTCACCGCCATACGAGTCCTaGTCCTGCCCCAAGATGATGCTTGCATCTGGCCCC +
Preference number: 6 (lower is better)
Translates to: DCFASKSPPYES*SCPKMMLASGP
Trigger: GGGGCCAGATGCAAGCATCATCTTGGGGCAGGAGCAGGACTCGTATGGCGGTGACTTTGATGCAAAGCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038495.5
CDS GCA 72 bp TTTGCATCAAAGTCACCGCCATACGAGTCCTGCTCCTaGCCCAAGATGATGCTTGCATCTGGCCCCACAGTG +
Preference number: 6 (lower is better)
Translates to: FASKSPPYESCS*PKMMLASGPTV
Trigger: CACTGTGGGGCCAGATGCAAGCATCATCTTGGGGCAGGAGCAGGACTCGTATGGCGGTGACTTTGATGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038495.5
CDS TCA 72 bp GCTGGCACAGATGTGTGTTGGAGCCTCAGGAATCTCTaGAACCATGAATCGTACTTCAGCACCACCCACTCC +
Preference number: 6 (lower is better)
Translates to: AGTDVCWSLRNL*NHESYFSTTHS
Trigger: GGAGTGGGTGGTGCTGAAGTACGATTCATGGTTTCAGAGATTCCTGAGGCTCCAACACACATCTGTGCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038495.5
CDS CCA 72 bp CCACAGTGTAGCCCTTGTGCAGACTTTTCCGCACCTTaGGTTTCCCATCAATCCAGAACTCTACAATCCCCG +
Preference number: 6 (lower is better)
Translates to: PQCSPCADFSAP*VSHQSRTLQSP
Trigger: CGGGGATTGTAGAGTTCTGGATTGATGGGAAACCCAAGGTGCGGAAAAGTCTGCACAAGGGCTACACTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038495.5
CDS GCA 72 bp CTTAATAAACACATCACCCTGTGCTTTATAGTTCAGTaGCCGCCAGTTCAAAACATTGGGGCTGAGTGTCCC +
Preference number: 6 (lower is better)
Translates to: LNKHITLCFIVQ*PPVQNIGAECP
Trigger: GGGACACTCAGCCCCAATGTTTTGAACTGGCGGGCACTGAACTATAAAGCACAGGGTGATGTGTTTATTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038495.5