Pregenerated sensors for CROT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003623Ensembl transcript IDs: ENSMUST00000003720.5
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CTATTGTACAATAGTGGTTTTCCCATGAACTCTCACAGGCTGTACTCCTGTGCTTGTTCACAGAGGACTTaGAGCCTACACATGTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: LLYNSGFPMNSHRLYSCACSQRT*SLHMCQ Trigger: TTGGCACATGTGTAGGCTGCAAGTCCTCTGTGAACA...AGCACAGGAGTACAGCCTGTGAGAGTTCATGGGAAAACCACTATTGTACAATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| 3UTR-3UTR CCA 90 bp | GCTCAAAGGAGCTATTTTAGATCACTATTGTACAATAGTGGTTTTCCCATGAACTCTGACTTTGCATTGTaGTTGCAACACAGGAGACTT | + |
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Preference number: 2 (lower is better) Translates to: AQRSYFRSLLYNSGFPMNSDFAL*LQHRRL Trigger: AAGTCTCCTGTGTTGCAACCACAATGCAAAGTCAGA...GTTCATGGGAAAACCACTATTGTACAATAGTGATCTAAAATAGCTCCTTTGAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| 3UTR-3UTR GCA 90 bp | CACATGTGCCAACAAAACTATTTTAACATCAGAGTAGGATTTGCTTTGATTGAGACTTTGCATTGTGGTTaGAACACAGGAGACTTTAAG | + |
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Preference number: 2 (lower is better) Translates to: HMCQQNYFNIRVGFALIETLHCG*NTGDFK Trigger: CTTAAAGTCTCCTGTGTTGCAACCACAATGCAAAGT...CTCAATCAAAGCAAATCCTACTCTGATGTTAAAATAGTTTTGTTGGCACATGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| 3UTR GCA 72 bp | TGGTTTTCCCATGAACTCTCACAGGCTGTACTCCTGTaGTGGGTGTGGAAGGCACTGATGTCAGAGAAATTA | + |
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Preference number: 3 (lower is better) Translates to: WFSHELSQAVLL*WVWKALMSEKL Trigger: TAATTTCTCTGACATCAGTGCCTTCCACACCCAGCACAGGAGTACAGCCTGTGAGAGTTCATGGGAAAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| 3UTR CCA 72 bp | TTTTCCCATGAACTCTCACAGGCTGTACTCCTGTGCTaGGTGTGGAAGGCACTGATGTCAGAGAAATTAGCT | + |
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Preference number: 3 (lower is better) Translates to: FSHELSQAVLLC*VWKALMSEKLA Trigger: AGCTAATTTCTCTGACATCAGTGCCTTCCACACCCAGCACAGGAGTACAGCCTGTGAGAGTTCATGGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| 3UTR-3UTR CAA 90 bp | CAGAGGACTTGCAGCCTACACATGTGCCAACAAAACTATTTTAACATCAGAGTAATATCTGACTTTGCATaGTGGTTGCAACACAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: QRTCSLHMCQQNYFNIRVISDFA*WLQHRR Trigger: TCTCCTGTGTTGCAACCACAATGCAAAGTCAGATAT...TACTCTGATGTTAAAATAGTTTTGTTGGCACATGTGTAGGCTGCAAGTCCTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR CCA 90 bp | CTATTGTACAATAGTGGTTTTCCCATGAACTCTCACAGGCTGTACTCCTGTGCTGGATCCTGCATGGACTaGCACCACCTGACGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: LLYNSGFPMNSHRLYSCAGSCMD*HHLTAS Trigger: GGAGGCCGTCAGGTGGTGCCAGTCCATGCAGGATCC...AGCACAGGAGTACAGCCTGTGAGAGTTCATGGGAAAACCACTATTGTACAATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR TCA 90 bp | CTATTGTACAATAGTGGTTTTCCCATGAACTCTCACAGGCTGTACTCCTGTGCTGTCACCCCAGCGTACTaGTGGATCTCCACCAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: LLYNSGFPMNSHRLYSCAVTPAY*WISTKK Trigger: CTTCTTGGTGGAGATCCATCAGTACGCTGGGGTGAC...AGCACAGGAGTACAGCCTGTGAGAGTTCATGGGAAAACCACTATTGTACAATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR TCA 90 bp | CTATTGTACAATAGTGGTTTTCCCATGAACTCTCACAGGCTGTACTCCTGTGCTTGCAGGAACAGGCAATaGCGGAAGAGAGTCCTGGTA | + |
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Preference number: 4 (lower is better) Translates to: LLYNSGFPMNSHRLYSCACRNRQ*RKRVLV Trigger: TACCAGGACTCTCTTCCGTCATTGCCTGTTCCTGCA...AGCACAGGAGTACAGCCTGTGAGAGTTCATGGGAAAACCACTATTGTACAATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR GCA 90 bp | CTATTGTACAATAGTGGTTTTCCCATGAACTCTCACAGGCTGTACTCCTGTGCTCAAAGACAAACGCTCTaGCTCGACACAGCACGGCAA | + |
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Preference number: 4 (lower is better) Translates to: LLYNSGFPMNSHRLYSCAQRQTL*LDTARQ Trigger: TTGCCGTGCTGTGTCGAGGCAGAGCGTTTGTCTTTG...AGCACAGGAGTACAGCCTGTGAGAGTTCATGGGAAAACCACTATTGTACAATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR TCA 90 bp | CTATTGTACAATAGTGGTTTTCCCATGAACTCTCACAGGCTGTACTCCTGTGCTTTTTCTCATCCACAGTaGAGACCAGCTCCTCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: LLYNSGFPMNSHRLYSCAFSHPQ*RPAPLA Trigger: TGCCAGAGGAGCTGGTCTTCACTGTGGATGAGAAAA...AGCACAGGAGTACAGCCTGTGAGAGTTCATGGGAAAACCACTATTGTACAATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR TCA 90 bp | CTATTGTACAATAGTGGTTTTCCCATGAACTCTCACAGGCTGTACTCCTGTGCTGGGCTTCCTCCTTGGTaGGCTTTTTGCCAAAAGATG | + |
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Preference number: 4 (lower is better) Translates to: LLYNSGFPMNSHRLYSCAGLPPW*AFCQKM Trigger: CATCTTTTGGCAAAAAGCTCACCAAGGAGGAAGCCC...AGCACAGGAGTACAGCCTGTGAGAGTTCATGGGAAAACCACTATTGTACAATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR GCA 90 bp | CTATTGTACAATAGTGGTTTTCCCATGAACTCTCACAGGCTGTACTCCTGTGCTATATTCTCTTGCCTTTaGCCACCGAGTTCGCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: LLYNSGFPMNSHRLYSCAIFSCL*PPSSLL Trigger: GAGGAGCGAACTCGGTGGGCAAAGGCAAGAGAATAT...AGCACAGGAGTACAGCCTGTGAGAGTTCATGGGAAAACCACTATTGTACAATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR TCA 90 bp | TTGATCCTTTTGCCTGCTCAAAGGAGCTATTTTAGATCACTATTGTACAATAGTTGGACTGGCACCACCTaGCGGCCTCCACTGTACAAG | + |
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Preference number: 4 (lower is better) Translates to: LILLPAQRSYFRSLLYNSWTGTT*RPPLYK Trigger: CTTGTACAGTGGAGGCCGTCAGGTGGTGCCAGTCCA...ACTATTGTACAATAGTGATCTAAAATAGCTCCTTTGAGCAGGCAAAAGGATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR CCA 90 bp | CTATTGTACAATAGTGGTTTTCCCATGAACTCTCACAGGCTGTACTCCTGTGCTGCAGCTTTGAGATGTTaGGCTTTGGCTTGGGATACA | + |
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Preference number: 4 (lower is better) Translates to: LLYNSGFPMNSHRLYSCAAALRC*ALAWDT Trigger: TGTATCCCAAGCCAAAGCCCAACATCTCAAAGCTGC...AGCACAGGAGTACAGCCTGTGAGAGTTCATGGGAAAACCACTATTGTACAATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR TCA 90 bp | CTATTGTACAATAGTGGTTTTCCCATGAACTCTCACAGGCTGTACTCCTGTGCTAGAGAGTCCTGGTACTaGAATGTCCGTTCTTCAACT | + |
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Preference number: 4 (lower is better) Translates to: LLYNSGFPMNSHRLYSCARESWY*NVRSST Trigger: AGTTGAAGAACGGACATTTCAGTACCAGGACTCTCT...AGCACAGGAGTACAGCCTGTGAGAGTTCATGGGAAAACCACTATTGTACAATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR TCA 90 bp | GCTCAAAGGAGCTATTTTAGATCACTATTGTACAATAGTGGTTTTCCCATGAACCCAGGTAGGCAACATTaGGCCACCATTCTTCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: AQRSYFRSLLYNSGFPMNPGRQH*ATILPA Trigger: GGCTGGAAGAATGGTGGCTCAATGTTGCCTACCTGG...GTTCATGGGAAAACCACTATTGTACAATAGTGATCTAAAATAGCTCCTTTGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR TCA 90 bp | CAGAGGACTTGCAGCCTACACATGTGCCAACAAAACTATTTTAACATCAGAGTAGTCCCGGACTTTTTCTaGACCCTTCCATCTTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: QRTCSLHMCQQNYFNIRVVPDFF*TLPSSF Trigger: GAAGGAAGATGGAAGGGTTCAGAAAAAGTCCGGGAC...TACTCTGATGTTAAAATAGTTTTGTTGGCACATGTGTAGGCTGCAAGTCCTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR GCA 90 bp | CAGAGGACTTGCAGCCTACACATGTGCCAACAAAACTATTTTAACATCAGAGTACTCTTTCTAACTGAGTaGCTTCCCTTGCAGGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: QRTCSLHMCQQNYFNIRVLFLTE*LPLQAS Trigger: ACTGGCCTGCAAGGGAAGGCACTCAGTTAGAAAGAG...TACTCTGATGTTAAAATAGTTTTGTTGGCACATGTGTAGGCTGCAAGTCCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR GCA 90 bp | CTATTGTACAATAGTGGTTTTCCCATGAACTCTCACAGGCTGTACTCCTGTGCTTGTGCCACAGCATCATaGTTCCTCTTTCTAACTGAG | + |
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Preference number: 4 (lower is better) Translates to: LLYNSGFPMNSHRLYSCACATAS*FLFLTE Trigger: CTCAGTTAGAAAGAGGAAGCATGATGCTGTGGCACA...AGCACAGGAGTACAGCCTGTGAGAGTTCATGGGAAAACCACTATTGTACAATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR GCA 90 bp | CACATGTGCCAACAAAACTATTTTAACATCAGAGTAGGATTTGCTTTGATTGAGCTAGCAGAGGGATCCTaGATGGACTGGCACCACCTG | + |
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Preference number: 4 (lower is better) Translates to: HMCQQNYFNIRVGFALIELAEGS*MDWHHL Trigger: CAGGTGGTGCCAGTCCATGCAGGATCCCTCTGCTAG...CTCAATCAAAGCAAATCCTACTCTGATGTTAAAATAGTTTTGTTGGCACATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR TCA 90 bp | CTATTGTACAATAGTGGTTTTCCCATGAACTCTCACAGGCTGTACTCCTGTGCTCTTTCAAGTAACTTCTaGTGCAATCTTTTGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LLYNSGFPMNSHRLYSCALSSNF*CNLLPA Trigger: AGCTGGCAAAAGATTGCATCAGAAGTTACTTGAAAG...AGCACAGGAGTACAGCCTGTGAGAGTTCATGGGAAAACCACTATTGTACAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR TCA 90 bp | CAGAGGACTTGCAGCCTACACATGTGCCAACAAAACTATTTTAACATCAGAGTAGTTCACATTCAGTTGTaGTGGAATACGTACGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: QRTCSLHMCQQNYFNIRVVHIQL*WNTYVQ Trigger: CTGGACGTACGTATTCCATCACAACTGAATGTGAAC...TACTCTGATGTTAAAATAGTTTTGTTGGCACATGTGTAGGCTGCAAGTCCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR GCA 90 bp | CAGAGGACTTGCAGCCTACACATGTGCCAACAAAACTATTTTAACATCAGAGTAAATCAGATATTCTCTTaGCTTTGCCCACCGAGTTCG | + |
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Preference number: 4 (lower is better) Translates to: QRTCSLHMCQQNYFNIRVNQIFS*LCPPSS Trigger: CGAACTCGGTGGGCAAAGGCAAGAGAATATCTGATT...TACTCTGATGTTAAAATAGTTTTGTTGGCACATGTGTAGGCTGCAAGTCCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR CCA 90 bp | CAGAGGACTTGCAGCCTACACATGTGCCAACAAAACTATTTTAACATCAGAGTATTGTCTGAGAAGTTCTaGTGGGGTGATCAAACATCC | + |
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Preference number: 4 (lower is better) Translates to: QRTCSLHMCQQNYFNIRVLSEKF*WGDQTS Trigger: GGATGTTTGATCACCCCACCAGAACTTCTCAGACAA...TACTCTGATGTTAAAATAGTTTTGTTGGCACATGTGTAGGCTGCAAGTCCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR CCA 90 bp | GCTCAAAGGAGCTATTTTAGATCACTATTGTACAATAGTGGTTTTCCCATGAACCACCTCCTCCACTTCTaGAGAAAAGTGGGTCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: AQRSYFRSLLYNSGFPMNHLLHF*RKVGPQ Trigger: TTGAGGACCCACTTTTCTCCAGAAGTGGAGGAGGTG...GTTCATGGGAAAACCACTATTGTACAATAGTGATCTAAAATAGCTCCTTTGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR CCA 90 bp | CTATTGTACAATAGTGGTTTTCCCATGAACTCTCACAGGCTGTACTCCTGTGCTAACAACATTCGGAATTaGTTCATGTCTAGAGGAGTA | + |
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Preference number: 4 (lower is better) Translates to: LLYNSGFPMNSHRLYSCANNIRN*FMSRGV Trigger: TACTCCTCTAGACATGAACCAATTCCGAATGTTGTT...AGCACAGGAGTACAGCCTGTGAGAGTTCATGGGAAAACCACTATTGTACAATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR CCA 90 bp | GCTCAAAGGAGCTATTTTAGATCACTATTGTACAATAGTGGTTTTCCCATGAACTCTGAGAAGTTCTGGTaGGGTGATCAAACATCCCTC | + |
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Preference number: 4 (lower is better) Translates to: AQRSYFRSLLYNSGFPMNSEKFW*GDQTSL Trigger: GAGGGATGTTTGATCACCCCACCAGAACTTCTCAGA...GTTCATGGGAAAACCACTATTGTACAATAGTGATCTAAAATAGCTCCTTTGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR TCA 90 bp | CACATGTGCCAACAAAACTATTTTAACATCAGAGTAGGATTTGCTTTGATTGAGGTGCAATGTTCACCATaGCCATTGCATCGTAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: HMCQQNYFNIRVGFALIEVQCSP*PLHRKE Trigger: CTCCTTACGATGCAATGGTCATGGTGAACATTGCAC...CTCAATCAAAGCAAATCCTACTCTGATGTTAAAATAGTTTTGTTGGCACATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR GCA 90 bp | CACATGTGCCAACAAAACTATTTTAACATCAGAGTAGGATTTGCTTTGATTGAGATGTGGGTTGGACAATaGCCTTCACTCTCAGTCTTA | + |
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Preference number: 4 (lower is better) Translates to: HMCQQNYFNIRVGFALIEMWVGQ*PSLSVL Trigger: TAAGACTGAGAGTGAAGGGCATTGTCCAACCCACAT...CTCAATCAAAGCAAATCCTACTCTGATGTTAAAATAGTTTTGTTGGCACATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR GCA 90 bp | CAGAGGACTTGCAGCCTACACATGTGCCAACAAAACTATTTTAACATCAGAGTACTCATCAACATAATGTaGAATGTTCACCATGACCAT | + |
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Preference number: 4 (lower is better) Translates to: QRTCSLHMCQQNYFNIRVLINIM*NVHHDH Trigger: ATGGTCATGGTGAACATTGCACATTATGTTGATGAG...TACTCTGATGTTAAAATAGTTTTGTTGGCACATGTGTAGGCTGCAAGTCCTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR CCA 90 bp | TTGATCCTTTTGCCTGCTCAAAGGAGCTATTTTAGATCACTATTGTACAATAGTCTGAGAATATTCTTCTaGGGTTGCATGTGGACTGCT | + |
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Preference number: 4 (lower is better) Translates to: LILLPAQRSYFRSLLYNSLRIFF*GCMWTA Trigger: AGCAGTCCACATGCAACCCCAGAAGAATATTCTCAG...ACTATTGTACAATAGTGATCTAAAATAGCTCCTTTGAGCAGGCAAAAGGATCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR CCA 90 bp | TTGATCCTTTTGCCTGCTCAAAGGAGCTATTTTAGATCACTATTGTACAATAGTATCCATTGTGTACCATaGGAACCACAACACCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: LILLPAQRSYFRSLLYNSIHCVP*EPQHPE Trigger: TTCAGGGTGTTGTGGTTCCCATGGTACACAATGGAT...ACTATTGTACAATAGTGATCTAAAATAGCTCCTTTGAGCAGGCAAAAGGATCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR TCA 90 bp | TTGATCCTTTTGCCTGCTCAAAGGAGCTATTTTAGATCACTATTGTACAATAGTACCAACCAAACTTGTTaGGAGCACAAAATTTCCACC | + |
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Preference number: 4 (lower is better) Translates to: LILLPAQRSYFRSLLYNSTNQTC*EHKIST Trigger: GGTGGAAATTTTGTGCTCTCAACAAGTTTGGTTGGT...ACTATTGTACAATAGTGATCTAAAATAGCTCCTTTGAGCAGGCAAAAGGATCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR GCA 90 bp | CACATGTGCCAACAAAACTATTTTAACATCAGAGTAGGATTTGCTTTGATTGAGGGGTTGCATGTGGACTaGTATCTTCTATGGAATACA | + |
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Preference number: 4 (lower is better) Translates to: HMCQQNYFNIRVGFALIEGLHVD*YLLWNT Trigger: TGTATTCCATAGAAGATAGCAGTCCACATGCAACCC...CTCAATCAAAGCAAATCCTACTCTGATGTTAAAATAGTTTTGTTGGCACATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR GCA 90 bp | TTGATCCTTTTGCCTGCTCAAAGGAGCTATTTTAGATCACTATTGTACAATAGTATATTCTTCTGGGGTTaGATGTGGACTGCTATCTTC | + |
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Preference number: 4 (lower is better) Translates to: LILLPAQRSYFRSLLYNSIFFWG*MWTAIF Trigger: GAAGATAGCAGTCCACATGCAACCCCAGAAGAATAT...ACTATTGTACAATAGTGATCTAAAATAGCTCCTTTGAGCAGGCAAAAGGATCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR TCA 90 bp | TTGATCCTTTTGCCTGCTCAAAGGAGCTATTTTAGATCACTATTGTACAATAGTAGCATTTCAAAGACCTaGGAATATTCTTCTGGGGTT | + |
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Preference number: 4 (lower is better) Translates to: LILLPAQRSYFRSLLYNSSISKT*EYSSGV Trigger: AACCCCAGAAGAATATTCTCAGGTCTTTGAAATGCT...ACTATTGTACAATAGTGATCTAAAATAGCTCCTTTGAGCAGGCAAAAGGATCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR GCA 90 bp | GCTCAAAGGAGCTATTTTAGATCACTATTGTACAATAGTGGTTTTCCCATGAACTTCATCATCTTATTATaGTTGGCAAAAGCTTCTAGC | + |
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Preference number: 4 (lower is better) Translates to: AQRSYFRSLLYNSGFPMNFIILL*LAKASS Trigger: GCTAGAAGCTTTTGCCAAGCATAATAAGATGATGAA...GTTCATGGGAAAACCACTATTGTACAATAGTGATCTAAAATAGCTCCTTTGAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR CCA 90 bp | CACATGTGCCAACAAAACTATTTTAACATCAGAGTAGGATTTGCTTTGATTGAGTTCGAGCACTTCTTGTaGATATATGTCAATTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: HMCQQNYFNIRVGFALIEFEHFL*IYVNCL Trigger: CAGACAATTGACATATATCCACAAGAAGTGCTCGAA...CTCAATCAAAGCAAATCCTACTCTGATGTTAAAATAGTTTTGTTGGCACATGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR CCA 90 bp | GCTCAAAGGAGCTATTTTAGATCACTATTGTACAATAGTGGTTTTCCCATGAACTCATCTTATTATGCTTaGCAAAAGCTTCTAGCATCT | + |
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Preference number: 4 (lower is better) Translates to: AQRSYFRSLLYNSGFPMNSSYYA*QKLLAS Trigger: AGATGCTAGAAGCTTTTGCCAAGCATAATAAGATGA...GTTCATGGGAAAACCACTATTGTACAATAGTGATCTAAAATAGCTCCTTTGAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR CCA 90 bp | CACATGTGCCAACAAAACTATTTTAACATCAGAGTAGGATTTGCTTTGATTGAGGACTGCTATCTTCTATaGAATACACAAATAAACTGG | + |
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Preference number: 4 (lower is better) Translates to: HMCQQNYFNIRVGFALIEDCYLL*NTQINW Trigger: CCAGTTTATTTGTGTATTCCATAGAAGATAGCAGTC...CTCAATCAAAGCAAATCCTACTCTGATGTTAAAATAGTTTTGTTGGCACATGTG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS GCA 90 bp | AGTTCAAGTTGTGCCACAGCATCATGCTTCCTCTTTCTAACTGAGTaGCTTCCCTTGCAGGCCAGTAGTGCTCAAAATGAGGACACGGAC | + |
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Preference number: 5 (lower is better) Translates to: SSSCATASCFLFLTE*LPLQASSAQNEDTD Trigger: GTCCGTGTCCTCATTTTGAGCACTACTGGCCTGCAAGGGAAGGCACTCAGTTAGAAAGAGGAAGCATGATGCTGTGGCACAACTTGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS GCA 90 bp | CTCTTCTTAGCAGCTGCCAGTAGTTCAAGTTGTGCCACAGCATCATaGTTCCTCTTTCTAACTGAGTGCCTTCCCTTGCAGGCCAGTAGT | + |
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Preference number: 5 (lower is better) Translates to: LFLAAASSSSCATAS*FLFLTECLPLQASS Trigger: ACTACTGGCCTGCAAGGGAAGGCACTCAGTTAGAAAGAGGAAGCATGATGCTGTGGCACAACTTGAACTACTGGCAGCTGCTAAGAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS TCA 90 bp | GTGCTCAAAATGAGGACACGGACCCACAAAGTTCACATTCAGTTGTaGTGGAATACGTACGTCCAGGTAGGCAACATTGAGCCACCATTC | + |
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Preference number: 5 (lower is better) Translates to: VLKMRTRTHKVHIQL*WNTYVQVGNIEPPF Trigger: GAATGGTGGCTCAATGTTGCCTACCTGGACGTACGTATTCCATCACAACTGAATGTGAACTTTGTGGGTCCGTGTCCTCATTTTGAGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS TCA 90 bp | GGGCTTTGGCTTGGGATACATCATTCAGTATTTTCTCATCCACAGTaGAGACCAGCTCCTCTGGCAATGGTATGTCCCGGACTTTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: GLWLGIHHSVFSHPQ*RPAPLAMVCPGLFL Trigger: CAGAAAAAGTCCGGGACATACCATTGCCAGAGGAGCTGGTCTTCACTGTGGATGAGAAAATACTGAATGATGTATCCCAAGCCAAAGCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR CAA 90 bp | CTATTGTACAATAGTGGTTTTCCCATGAACTCTCACAGGCTGTACTCCTGTGCTCGCAGCTTTGAGATGTaGGGCTTTGGCTTGGGATAC | + |
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Preference number: 5 (lower is better) Translates to: LLYNSGFPMNSHRLYSCARSFEM*GFGLGY Trigger: GTATCCCAAGCCAAAGCCCAACATCTCAAAGCTGCG...AGCACAGGAGTACAGCCTGTGAGAGTTCATGGGAAAACCACTATTGTACAATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS TCA 90 bp | CCCCAGCGTACTGATGGATCTCCACCAAGAAGCATTTCAAAGACCTaGGAATATTCTTCTGGGGTTGCATGTGGACTGCTATCTTCTATG | + |
|
Preference number: 5 (lower is better) Translates to: PQRTDGSPPRSISKT*EYSSGVACGLLSSM Trigger: CATAGAAGATAGCAGTCCACATGCAACCCCAGAAGAATATTCTCAGGTCTTTGAAATGCTTCTTGGTGGAGATCCATCAGTACGCTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS GCA 90 bp | TTGGTGAGCTTTTTGCCAAAAGATGTGAAGGTAGATGCTGCTATCTaGAGATCTGACGCAGCTTTGAGATGTTGGGCTTTGGCTTGGGAT | + |
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Preference number: 5 (lower is better) Translates to: LVSFLPKDVKVDAAI*RSDAALRCWALAWD Trigger: ATCCCAAGCCAAAGCCCAACATCTCAAAGCTGCGTCAGATCTGCAGATAGCAGCATCTACCTTCACATCTTTTGGCAAAAAGCTCACCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR CAA 90 bp | CAGAGGACTTGCAGCCTACACATGTGCCAACAAAACTATTTTAACATCAGAGTAACTGAGTGCCTTCCCTaGCAGGCCAGTAGTGCTCAA | + |
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Preference number: 5 (lower is better) Translates to: QRTCSLHMCQQNYFNIRVTECLP*QASSAQ Trigger: TTGAGCACTACTGGCCTGCAAGGGAAGGCACTCAGT...TACTCTGATGTTAAAATAGTTTTGTTGGCACATGTGTAGGCTGCAAGTCCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS TCA 90 bp | GACATGACCTCCAGGATGAACATGCCACCACAAACCTGTCATCTCTaGTGTGGTAGAAAAATCCATATCCATTGTGTACCATGGGAACCA | + |
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Preference number: 5 (lower is better) Translates to: DMTSRMNMPPQTCHL*CGRKIHIHCVPWEP Trigger: TGGTTCCCATGGTACACAATGGATATGGATTTTTCTACCACATCAGAGATGACAGGTTTGTGGTGGCATGTTCATCCTGGAGGTCATGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS CCA 90 bp | AATGCCGCTATACTGGGTCCAACAGGTTCGTTCGAGCACTTCTTGTaGATATATGTCAATTGTCTGAGAAGTTCTGGTGGGGTGATCAAA | + |
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Preference number: 5 (lower is better) Translates to: NAAILGPTGSFEHFL*IYVNCLRSSGGVIK Trigger: TTTGATCACCCCACCAGAACTTCTCAGACAATTGACATATATCCACAAGAAGTGCTCGAACGAACCTGTTGGACCCAGTATAGCGGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS CCA 90 bp | ATCAAAGACAAACGCTCTGCCTCGACACAGCACGGCAATGTGGGTTaGACAATGCCCTTCACTCTCAGTCTTAAAATAATTCATAATCGA | + |
|
Preference number: 5 (lower is better) Translates to: IKDKRSASTQHGNVG*TMPFTLSLKIIHNR Trigger: TCGATTATGAATTATTTTAAGACTGAGAGTGAAGGGCATTGTCCAACCCACATTGCCGTGCTGTGTCGAGGCAGAGCGTTTGTCTTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS TCA 90 bp | CTGTCTCTAGGACTCTCTCATCAACATAATGTGCAATGTTCACCATaGCCATTGCATCGTAAGGAGCATGATCACAGCAACAGCCAAATA | + |
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Preference number: 5 (lower is better) Translates to: LSLGLSHQHNVQCSP*PLHRKEHDHSNSQI Trigger: TATTTGGCTGTTGCTGTGATCATGCTCCTTACGATGCAATGGTCATGGTGAACATTGCACATTATGTTGATGAGAGAGTCCTAGAGACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR CAA 90 bp | CTATTGTACAATAGTGGTTTTCCCATGAACTCTCACAGGCTGTACTCCTGTGCTGTGGATATATGTCAATaGTCTGAGAAGTTCTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: LLYNSGFPMNSHRLYSCAVDICQ*SEKFWW Trigger: CCACCAGAACTTCTCAGACAATTGACATATATCCAC...AGCACAGGAGTACAGCCTGTGAGAGTTCATGGGAAAACCACTATTGTACAATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR CAA 90 bp | GCTCAAAGGAGCTATTTTAGATCACTATTGTACAATAGTGGTTTTCCCATGAACGATATTCTCTTGCCTTaGCCCACCGAGTTCGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: AQRSYFRSLLYNSGFPMNDILLP*PTEFAP Trigger: AGGAGCGAACTCGGTGGGCAAAGGCAAGAGAATATC...GTTCATGGGAAAACCACTATTGTACAATAGTGATCTAAAATAGCTCCTTTGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR CAA 90 bp | CTATTGTACAATAGTGGTTTTCCCATGAACTCTCACAGGCTGTACTCCTGTGCTTATACTCGTCTTCATTaGCGAATGGTTTCACTGATT | + |
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Preference number: 5 (lower is better) Translates to: LLYNSGFPMNSHRLYSCAYTRLH*RMVSLI Trigger: AATCAGTGAAACCATTCGCAAATGAAGACGAGTATA...AGCACAGGAGTACAGCCTGTGAGAGTTCATGGGAAAACCACTATTGTACAATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR CAA 90 bp | CTATTGTACAATAGTGGTTTTCCCATGAACTCTCACAGGCTGTACTCCTGTGCTTTTGCCAGCTCCTTCTaGAAACTTTTGAACTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLYNSGFPMNSHRLYSCAFASSF*KLLNYF Trigger: GAAATAGTTCAAAAGTTTCAAGAAGGAGCTGGCAAA...AGCACAGGAGTACAGCCTGTGAGAGTTCATGGGAAAACCACTATTGTACAATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS TCA 90 bp | ATTAGCAAAGGAAATCAAATTATAGGACTTGTCACCCCAGCGTACTaGTGGATCTCCACCAAGAAGCATTTCAAAGACCTGAGAATATTC | + |
|
Preference number: 5 (lower is better) Translates to: ISKGNQIIGLVTPAY*WISTKKHFKDLRIF Trigger: GAATATTCTCAGGTCTTTGAAATGCTTCTTGGTGGAGATCCATCAGTACGCTGGGGTGACAAGTCCTATAATTTGATTTCCTTTGCTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR CAA 90 bp | CAGAGGACTTGCAGCCTACACATGTGCCAACAAAACTATTTTAACATCAGAGTAGTAATTCCTGGAACCTaGCAGGTAGAAAACAACATT | + |
|
Preference number: 5 (lower is better) Translates to: QRTCSLHMCQQNYFNIRVVIPGT*QVENNI Trigger: AATGTTGTTTTCTACCTGCAAGGTTCCAGGAATTAC...TACTCTGATGTTAAAATAGTTTTGTTGGCACATGTGTAGGCTGCAAGTCCTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS CCA 90 bp | CTAGTAATTCCTGGAACCTTGCAGGTAGAAAACAACATTCGGAATTaGTTCATGTCTAGAGGAGTATTTCCAGATTTATGTACAGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: LVIPGTLQVENNIRN*FMSRGVFPDLCTGN Trigger: ATTGCCTGTACATAAATCTGGAAATACTCCTCTAGACATGAACCAATTCCGAATGTTGTTTTCTACCTGCAAGGTTCCAGGAATTACTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR CAA 90 bp | TTGATCCTTTTGCCTGCTCAAAGGAGCTATTTTAGATCACTATTGTACAATAGTTCCTTGGTGAGCTTTTaGCCAAAAGATGTGAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LILLPAQRSYFRSLLYNSSLVSF*PKDVKV Trigger: TACCTTCACATCTTTTGGCAAAAAGCTCACCAAGGA...ACTATTGTACAATAGTGATCTAAAATAGCTCCTTTGAGCAGGCAAAAGGATCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR CAA 90 bp | TTGATCCTTTTGCCTGCTCAAAGGAGCTATTTTAGATCACTATTGTACAATAGTTCGTTCGAGCACTTCTaGTGGATATATGTCAATTGT | + |
|
Preference number: 5 (lower is better) Translates to: LILLPAQRSYFRSLLYNSSFEHF*WIYVNC Trigger: ACAATTGACATATATCCACAAGAAGTGCTCGAACGA...ACTATTGTACAATAGTGATCTAAAATAGCTCCTTTGAGCAGGCAAAAGGATCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR CAA 90 bp | GCTCAAAGGAGCTATTTTAGATCACTATTGTACAATAGTGGTTTTCCCATGAACATCATCTTATTATGCTaGGCAAAAGCTTCTAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: AQRSYFRSLLYNSGFPMNIILLC*AKASSI Trigger: GATGCTAGAAGCTTTTGCCAAGCATAATAAGATGAT...GTTCATGGGAAAACCACTATTGTACAATAGTGATCTAAAATAGCTCCTTTGAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS-3UTR CAA 90 bp | TTGATCCTTTTGCCTGCTCAAAGGAGCTATTTTAGATCACTATTGTACAATAGTAAAAATCCATATCCATaGTGTACCATGGGAACCACA | + |
|
Preference number: 5 (lower is better) Translates to: LILLPAQRSYFRSLLYNSKNPYP*CTMGTT Trigger: TGTGGTTCCCATGGTACACAATGGATATGGATTTTT...ACTATTGTACAATAGTGATCTAAAATAGCTCCTTTGAGCAGGCAAAAGGATCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS CCA 90 bp | ACTCTCAGTCTTAAAATAATTCATAATCGAATCTCTAGTAATTCCTaGAACCTTGCAGGTAGAAAACAACATTCGGAATTGGTTCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: TLSLKIIHNRISSNS*NLAGRKQHSELVHV Trigger: GACATGAACCAATTCCGAATGTTGTTTTCTACCTGCAAGGTTCCAGGAATTACTAGAGATTCGATTATGAATTATTTTAAGACTGAGAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS CCA 72 bp | CGTTCAAGGAGACTAGCAGAGGGATCCTGCATGGACTaGCACCACCTGACGGCCTCCACTGTACAAGATCGC | + |
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Preference number: 6 (lower is better) Translates to: RSRRLAEGSCMD*HHLTASTVQDR Trigger: GCGATCTTGTACAGTGGAGGCCGTCAGGTGGTGCCAGTCCATGCAGGATCCCTCTGCTAGTCTCCTTGAACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS CAA 90 bp | TGTGCCACAGCATCATGCTTCCTCTTTCTAACTGAGTGCCTTCCCTaGCAGGCCAGTAGTGCTCAAAATGAGGACACGGACCCACAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: CATASCFLFLTECLP*QASSAQNEDTDPQS Trigger: ACTTTGTGGGTCCGTGTCCTCATTTTGAGCACTACTGGCCTGCAAGGGAAGGCACTCAGTTAGAAAGAGGAAGCATGATGCTGTGGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS GCA 72 bp | GCAGCTGCCAGTAGTTCAAGTTGTGCCACAGCATCATaGTTCCTCTTTCTAACTGAGTGCCTTCCCTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: AAASSSSCATAS*FLFLTECLPLQ Trigger: CTGCAAGGGAAGGCACTCAGTTAGAAAGAGGAAGCATGATGCTGTGGCACAACTTGAACTACTGGCAGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS CAA 72 bp | GCATCATGCTTCCTCTTTCTAACTGAGTGCCTTCCCTaGCAGGCCAGTAGTGCTCAAAATGAGGACACGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ASCFLFLTECLP*QASSAQNEDTD Trigger: GTCCGTGTCCTCATTTTGAGCACTACTGGCCTGCAAGGGAAGGCACTCAGTTAGAAAGAGGAAGCATGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS TCA 72 bp | GTTGTGATGGAATACGTACGTCCAGGTAGGCAACATTaGGCCACCATTCTTCCAGCCAGTTTCGTTTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: VVMEYVRPGRQH*ATILPASFVFL Trigger: GAGGAAAACGAAACTGGCTGGAAGAATGGTGGCTCAATGTTGCCTACCTGGACGTACGTATTCCATCACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS GCA 72 bp | AACATCCCTCATGTAGTACATCAAAGACAAACGCTCTaGCTCGACACAGCACGGCAATGTGGGTTGGACAAT | + |
|
Preference number: 6 (lower is better) Translates to: NIPHVVHQRQTL*LDTARQCGLDN Trigger: ATTGTCCAACCCACATTGCCGTGCTGTGTCGAGGCAGAGCGTTTGTCTTTGATGTACTACATGAGGGATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS CAA 90 bp | GTTAATGCCGCTATACTGGGTCCAACAGGTTCGTTCGAGCACTTCTaGTGGATATATGTCAATTGTCTGAGAAGTTCTGGTGGGGTGATC | + |
|
Preference number: 6 (lower is better) Translates to: VNAAILGPTGSFEHF*WIYVNCLRSSGGVI Trigger: GATCACCCCACCAGAACTTCTCAGACAATTGACATATATCCACAAGAAGTGCTCGAACGAACCTGTTGGACCCAGTATAGCGGCATTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS TCA 72 bp | CTTGGGATACATCATTCAGTATTTTCTCATCCACAGTaGAGACCAGCTCCTCTGGCAATGGTATGTCCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: LGIHHSVFSHPQ*RPAPLAMVCPG Trigger: TCCGGGACATACCATTGCCAGAGGAGCTGGTCTTCACTGTGGATGAGAAAATACTGAATGATGTATCCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS TCA 72 bp | AAAAGATGTGAAGGTAGATGCTGCTATCTGCAGATCTaGCGCAGCTTTGAGATGTTGGGCTTTGGCTTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: KRCEGRCCYLQI*RSFEMLGFGLG Trigger: TCCCAAGCCAAAGCCCAACATCTCAAAGCTGCGTCAGATCTGCAGATAGCAGCATCTACCTTCACATCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS CCA 72 bp | AAACGCTCTGCCTCGACACAGCACGGCAATGTGGGTTaGACAATGCCCTTCACTCTCAGTCTTAAAATAATT | + |
|
Preference number: 6 (lower is better) Translates to: KRSASTQHGNVG*TMPFTLSLKII Trigger: AATTATTTTAAGACTGAGAGTGAAGGGCATTGTCCAACCCACATTGCCGTGCTGTGTCGAGGCAGAGCGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS CAA 72 bp | AAGGTAGATGCTGCTATCTGCAGATCTGACGCAGCTTaGAGATGTTGGGCTTTGGCTTGGGATACATCATTC | + |
|
Preference number: 6 (lower is better) Translates to: KVDAAICRSDAA*RCWALAWDTSF Trigger: GAATGATGTATCCCAAGCCAAAGCCCAACATCTCAAAGCTGCGTCAGATCTGCAGATAGCAGCATCTACCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS CAA 90 bp | GATGCTGCTATCTGCAGATCTGACGCAGCTTTGAGATGTTGGGCTTaGGCTTGGGATACATCATTCAGTATTTTCTCATCCACAGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: DAAICRSDAALRCWA*AWDTSFSIFSSTVK Trigger: CTTCACTGTGGATGAGAAAATACTGAATGATGTATCCCAAGCCAAAGCCCAACATCTCAAAGCTGCGTCAGATCTGCAGATAGCAGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS CCA 72 bp | ATACTGGGTCCAACAGGTTCGTTCGAGCACTTCTTGTaGATATATGTCAATTGTCTGAGAAGTTCTGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: ILGPTGSFEHFL*IYVNCLRSSGG Trigger: CCCACCAGAACTTCTCAGACAATTGACATATATCCACAAGAAGTGCTCGAACGAACCTGTTGGACCCAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS CCA 72 bp | GCTGCTATCTGCAGATCTGACGCAGCTTTGAGATGTTaGGCTTTGGCTTGGGATACATCATTCAGTATTTTC | + |
|
Preference number: 6 (lower is better) Translates to: AAICRSDAALRC*ALAWDTSFSIF Trigger: GAAAATACTGAATGATGTATCCCAAGCCAAAGCCCAACATCTCAAAGCTGCGTCAGATCTGCAGATAGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS TCA 72 bp | ACTGATGGATCTCCACCAAGAAGCATTTCAAAGACCTaGGAATATTCTTCTGGGGTTGCATGTGGACTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: TDGSPPRSISKT*EYSSGVACGLL Trigger: TAGCAGTCCACATGCAACCCCAGAAGAATATTCTCAGGTCTTTGAAATGCTTCTTGGTGGAGATCCATCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS TCA 72 bp | GGAAATCAAATTATAGGACTTGTCACCCCAGCGTACTaGTGGATCTCCACCAAGAAGCATTTCAAAGACCTG | + |
|
Preference number: 6 (lower is better) Translates to: GNQIIGLVTPAY*WISTKKHFKDL Trigger: CAGGTCTTTGAAATGCTTCTTGGTGGAGATCCATCAGTACGCTGGGGTGACAAGTCCTATAATTTGATTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS TCA 72 bp | GGACTCTCTCATCAACATAATGTGCAATGTTCACCATaGCCATTGCATCGTAAGGAGCATGATCACAGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: GLSHQHNVQCSP*PLHRKEHDHSN Trigger: GTTGCTGTGATCATGCTCCTTACGATGCAATGGTCATGGTGAACATTGCACATTATGTTGATGAGAGAGTCC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS TCA 72 bp | TTATTATGCTTGGCAAAAGCTTCTAGCATCTTTTGCTaGCGTTCAAGGAGACTAGCAGAGGGATCCTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: LLCLAKASSIFC*RSRRLAEGSCM Trigger: CATGCAGGATCCCTCTGCTAGTCTCCTTGAACGTCAGCAAAAGATGCTAGAAGCTTTTGCCAAGCATAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS GCA 72 bp | TTTTTGCCAAAAGATGTGAAGGTAGATGCTGCTATCTaGAGATCTGACGCAGCTTTGAGATGTTGGGCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: FLPKDVKVDAAI*RSDAALRCWAL Trigger: CAAAGCCCAACATCTCAAAGCTGCGTCAGATCTGCAGATAGCAGCATCTACCTTCACATCTTTTGGCAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS CAA 72 bp | GCTATACTGGGTCCAACAGGTTCGTTCGAGCACTTCTaGTGGATATATGTCAATTGTCTGAGAAGTTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: AILGPTGSFEHF*WIYVNCLRSSG Trigger: ACCAGAACTTCTCAGACAATTGACATATATCCACAAGAAGTGCTCGAACGAACCTGTTGGACCCAGTATAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS GCA 72 bp | CTCATCAACATAATGTGCAATGTTCACCATGACCATTaGATCGTAAGGAGCATGATCACAGCAACAGCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LINIMCNVHHDH*IVRSMITATAK Trigger: TTTGGCTGTTGCTGTGATCATGCTCCTTACGATGCAATGGTCATGGTGAACATTGCACATTATGTTGATGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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| CDS CCA 72 bp | CCTGGAACCTTGCAGGTAGAAAACAACATTCGGAATTaGTTCATGTCTAGAGGAGTATTTCCAGATTTATGT | + |
|
Preference number: 6 (lower is better) Translates to: PGTLQVENNIRN*FMSRGVFPDLC Trigger: ACATAAATCTGGAAATACTCCTCTAGACATGAACCAATTCCGAATGTTGTTTTCTACCTGCAAGGTTCCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003720.5 |
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