Pregenerated sensors for CRNN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078657Ensembl transcript IDs: ENSMUST00000107300.7, ENSMUST00000192372.2, ENSMUST00000195515.2
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CCTTTATTGATGCAATGGACAGATACCAGAGATAAAACAGCTTTGAAACCCCCTAGAGAGGTGAGTTTCTaGGAGCAGCAGGTAAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: PLLMQWTDTRDKTALKPPREVSF*EQQVRE Trigger: CTCTCTTACCTGCTGCTCTCAGAAACTCACCTCTCT...AGGGGGTTTCAAAGCTGTTTTATCTCTGGTATCTGTCCATTGCATCAATAAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000192372.2 ENSMUST00000195515.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTTATTGATGCAATGGACAGATACCAGAGATAAAACAGCTTTGAAACCCCCTTTCAGTGCAATGAGATaGCCTCCTCCACATCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: PLLMQWTDTRDKTALKPPFSAMR*PPPHLP Trigger: AGGAAGATGTGGAGGAGGTCATCTCATTGCACTGAA...AGGGGGTTTCAAAGCTGTTTTATCTCTGGTATCTGTCCATTGCATCAATAAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000192372.2 ENSMUST00000195515.2 |
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| CDS-3UTR GCA 90 bp | GATGACCTCCTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGGAAGGAGTACCAGAGTaGAGGCTACCTGGATCCTGG | + |
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Preference number: 4 (lower is better) Translates to: DDLLHIFLFLRISGKRGEEGVPE*RLPGSW Trigger: CCAGGATCCAGGTAGCCTGCACTCTGGTACTCCTTC...CTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAGGAGGTCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
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| CDS-3UTR TCA 90 bp | GACCTCCTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGTTTTCAGTCTGCCTGTCATaGCTGCTGACCTGTGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: DLLHIFLFLRISGKRGEFSVCLS*LLTCVG Trigger: CCCTACACAGGTCAGCAGTCATGACAGGCAGACTGA...AAACTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAGGAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192372.2 ENSMUST00000195515.2 |
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| CDS-3UTR TCA 90 bp | CTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGTTTCTGAGACCCACCTGTTCTGCCTaGCTGCTTTCTAGCCCATGG | + |
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Preference number: 4 (lower is better) Translates to: LHIFLFLRISGKRGEFLRPTCSA*LLSSPW Trigger: CCATGGGCTAGAAAGCAGTCAGGCAGAACAGGTGGG...TCTCAGAAACTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
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| CDS-3UTR TCA 90 bp | CTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGTTTCTGAGAATCCTGGCCCTGAGCTaGAGGAGTACCAGAGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: LHIFLFLRISGKRGEFLRILALS*RSTRVQ Trigger: CTGCACTCTGGTACTCCTTCAGCTCAGGGCCAGGAT...TCTCAGAAACTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
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| CDS-3UTR CCA 90 bp | GATGACCTCCTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGCTTGTCTTCTGTTCTTaGGGTCTGCTCCACCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: DDLLHIFLFLRISGKRGELVFCS*GLLHLS Trigger: GGACAGGTGGAGCAGACCCCAAGAACAGAAGACAAG...CTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAGGAGGTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192372.2 ENSMUST00000195515.2 |
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| CDS-3UTR TCA 90 bp | CTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGTTTCTGAGATCAGTCTGCCTGTCATaGCTGCTGACCTGTGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: LHIFLFLRISGKRGEFLRSVCLS*LLTCVG Trigger: CCCTACACAGGTCAGCAGTCATGACAGGCAGACTGA...TCTCAGAAACTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192372.2 ENSMUST00000195515.2 |
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| CDS-3UTR GCA 90 bp | CTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGTTTCTGAGACTGCCTGCTGGCTCCTaGCTTGTTCCATTGTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: LHIFLFLRISGKRGEFLRLPAGS*LVPLSE Trigger: CTCAGACAATGGAACAAGGCAGGAGCCAGCAGGCAG...TCTCAGAAACTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
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| CDS-3UTR GCA 90 bp | GATGACCTCCTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGCTACTATTTTCTGCCTaGTGGCTCCTGCCTTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: DDLLHIFLFLRISGKRGELLFSA*WLLPCS Trigger: GGAACAAGGCAGGAGCCAGCAGGCAGAAAATAGTAG...CTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAGGAGGTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
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| CDS-3UTR GCA 90 bp | CTCCTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGTTTCTGACTGGTGTCCAGCTTTaGCCCATGCATGGCTTTGTC | + |
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Preference number: 4 (lower is better) Translates to: LLHIFLFLRISGKRGEFLTGVQL*PMHGFV Trigger: GACAAAGCCATGCATGGGGCAAAGCTGGACACCAGT...CAGAAACTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
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| CDS-3UTR CCA 90 bp | GAGGTGAGTTTTGACAAGAAATCACCTTGTAGAGATGATCACTCACTCCAGCTGAGAGTGCAGGCTACCTaGATCCTGGCTTCGGATTAC | + |
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Preference number: 4 (lower is better) Translates to: EVSFDKKSPCRDDHSLQLRVQAT*ILASDY Trigger: GTAATCCGAAGCCAGGATCCAGGTAGCCTGCACTCT...CAGCTGGAGTGAGTGATCATCTCTACAAGGTGATTTCTTGTCAAAACTCACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
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| CDS-3UTR TCA 90 bp | CTCCTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGTTTCTGTTACCTGCTTGGGTCTaGGCTGTAGATCCAGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: LLHIFLFLRISGKRGEFLLPAWV*AVDPVV Trigger: CACAACTGGATCTACAGCTCAGACCCAAGCAGGTAA...CAGAAACTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
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| CDS-3UTR TCA 90 bp | GAGGTGAGTTTTGACAAGAAATCACCTTGTAGAGATGATCACTCACTCCAGCTGTGGCTTCTGTCTTGGTaGTGGCTGTTAGTTCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: EVSFDKKSPCRDDHSLQLWLLSW*WLLVPL Trigger: CAGAGGAACTAACAGCCATCACCAAGACAGAAGCCA...CAGCTGGAGTGAGTGATCATCTCTACAAGGTGATTTCTTGTCAAAACTCACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
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| CDS-3UTR GCA 90 bp | GATGACCTCCTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGACCCCTGTGTCTGGATaGTATCACTTCCTGTTTGCT | + |
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Preference number: 4 (lower is better) Translates to: DDLLHIFLFLRISGKRGETPVSG*YHFLFA Trigger: AGCAAACAGGAAGTGATAGCATCCAGACACAGGGGT...CTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAGGAGGTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
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| CDS-3UTR GCA 90 bp | CTCCTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGTTTCTGTTTAACACTCTGGCTTaGCTGGTTCCTGTCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: LLHIFLFLRISGKRGEFLFNTLA*LVPVLA Trigger: GGCCAAGACAGGAACCAGGCAAGCCAGAGTGTTAAA...CAGAAACTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
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| CDS-3UTR CCA 90 bp | GATGACCTCCTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGATCTCATCTGTCTGTTaGCTACTCTGTGGTTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: DDLLHIFLFLRISGKRGEISSVC*LLCGCL Trigger: GAGGCAACCACAGAGTAGCCAACAGACAGATGAGAT...CTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAGGAGGTCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192372.2 ENSMUST00000195515.2 |
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| CDS-3UTR CCA 90 bp | GATGACCTCCTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGCTATTTTCTGCCTGCTaGCTCCTGCCTTGTTCCATT | + |
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Preference number: 4 (lower is better) Translates to: DDLLHIFLFLRISGKRGELFSAC*LLPCSI Trigger: AATGGAACAAGGCAGGAGCCAGCAGGCAGAAAATAG...CTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAGGAGGTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
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| CDS-3UTR CCA 90 bp | GACCTCCTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGTTTTGTTTTGGCCATACATaGACCCATGAGTCTGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: DLLHIFLFLRISGKRGEFCFGHT*THESGC Trigger: GCACCCAGACTCATGGGTCCATGTATGGCCAAAACA...AAACTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAGGAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
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| CDS-3UTR CCA 90 bp | GATGACCTCCTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGTTTCTTCTCCATCTGTaGTATATCCTGGCCCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: DDLLHIFLFLRISGKRGEFLLHL*YILALS Trigger: GCTCAGGGCCAGGATATACCACAGATGGAGAAGAAA...CTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAGGAGGTCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
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| CDS-3UTR TCA 90 bp | CTCCTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGTTTCTGATCATTTCCTGTGTCTaGGACTCAGTCTGCCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLHIFLFLRISGKRGEFLIISCV*DSVCLS Trigger: TGACAGGCAGACTGAGTCTCAGACACAGGAAATGAT...CAGAAACTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192372.2 ENSMUST00000195515.2 |
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| CDS-3UTR TCA 90 bp | GAGGTGAGTTTTGACAAGAAATCACCTTGTAGAGATGATCACTCACTCCAGCTGATGTGTCTGAATATATaGCTCTCCCTGTGCCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: EVSFDKKSPCRDDHSLQLMCLNI*LSLCLV Trigger: CACCAGGCACAGGGAGAGTCATATATTCAGACACAT...CAGCTGGAGTGAGTGATCATCTCTACAAGGTGATTTCTTGTCAAAACTCACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
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| CDS-3UTR GCA 90 bp | CCTTTATTGATGCAATGGACAGATACCAGAGATAAAACAGCTTTGAAACCCCCTTCTGTTCTTGGGGTCTaGTCCACCTGTCCTGTCACT | + |
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Preference number: 4 (lower is better) Translates to: PLLMQWTDTRDKTALKPPSVLGV*STCPVT Trigger: AGTGACAGGACAGGTGGAGCAGACCCCAAGAACAGA...AGGGGGTTTCAAAGCTGTTTTATCTCTGGTATCTGTCCATTGCATCAATAAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000192372.2 ENSMUST00000195515.2 |
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| CDS-3UTR GCA 90 bp | GAGGTGAGTTTTGACAAGAAATCACCTTGTAGAGATGATCACTCACTCCAGCTGTGTAGAAGCTCTGTCTaGATGGCTTCTGTCTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: EVSFDKKSPCRDDHSLQLCRSSV*MASVLV Trigger: CACCAAGACAGAAGCCATGCAGACAGAGCTTCTACA...CAGCTGGAGTGAGTGATCATCTCTACAAGGTGATTTCTTGTCAAAACTCACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
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| CDS-3UTR GCA 90 bp | CCTTTATTGATGCAATGGACAGATACCAGAGATAAAACAGCTTTGAAACCCCCTGGTGCTACTATTTTCTaGCTGCTGGCTCCTGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: PLLMQWTDTRDKTALKPPGATIF*LLAPAL Trigger: CAAGGCAGGAGCCAGCAGGCAGAAAATAGTAGCACC...AGGGGGTTTCAAAGCTGTTTTATCTCTGGTATCTGTCCATTGCATCAATAAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
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| CDS-3UTR GCA 90 bp | CTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGTTTCTGAGACCTGTTCTGCCTGACTaGTTTCTAGCCCATGGATCT | + |
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Preference number: 4 (lower is better) Translates to: LHIFLFLRISGKRGEFLRPVLPD*FLAHGS Trigger: AGATCCATGGGCTAGAAAGCAGTCAGGCAGAACAGG...TCTCAGAAACTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
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| CDS-3UTR TCA 90 bp | GACCTCCTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGTTTAGACTAGGAATTCCTTaGACTCTACAGTCCCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: DLLHIFLFLRISGKRGEFRLGIP*TLQSLC Trigger: ACACAGGGACTGTAGAGTTCAAGGAATTCCTAGTCT...AAACTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAGGAGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
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| CDS-3UTR GCA 90 bp | GAGGTGAGTTTTGACAAGAAATCACCTTGTAGAGATGATCACTCACTCCAGCTGCCACCTCTCTGTCTTTaGTCCAGCTCTTTTGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: EVSFDKKSPCRDDHSLQLPPLCL*SSSFED Trigger: ATCTTCAAAAGAGCTGGAGCAAAGACAGAGAGGTGG...CAGCTGGAGTGAGTGATCATCTCTACAAGGTGATTTCTTGTCAAAACTCACCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
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| CDS-3UTR GCA 90 bp | CCTTTATTGATGCAATGGACAGATACCAGAGATAAAACAGCTTTGAAACCCCCTCTGCTGTCTTCACAGTaGTGTGCTGCTCCGTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: PLLMQWTDTRDKTALKPPLLSSQ*CAAPSF Trigger: AAAAGACGGAGCAGCACAGCACTGTGAAGACAGCAG...AGGGGGTTTCAAAGCTGTTTTATCTCTGGTATCTGTCCATTGCATCAATAAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000192372.2 ENSMUST00000195515.2 |
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| CDS-3UTR GCA 90 bp | AAGCCTTTATTGATGCAATGGACAGATACCAGAGATAAAACAGCTTTGAAACCCTCTGTTCTTGGGGTCTaGTCCACCTGTCCTGTCACT | + |
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Preference number: 4 (lower is better) Translates to: KPLLMQWTDTRDKTALKPSVLGV*STCPVT Trigger: AGTGACAGGACAGGTGGAGCAGACCCCAAGAACAGA...GGGTTTCAAAGCTGTTTTATCTCTGGTATCTGTCCATTGCATCAATAAAGGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192372.2 ENSMUST00000195515.2 |
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| CDS-3UTR GCA 90 bp | CCTTTATTGATGCAATGGACAGATACCAGAGATAAAACAGCTTTGAAACCCCCTTGGCTACTCTGTGGTTaGCTCTCTGACCTCTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: PLLMQWTDTRDKTALKPPWLLCG*LSDLFC Trigger: ACAGAAGAGGTCAGAGAGGCAACCACAGAGTAGCCA...AGGGGGTTTCAAAGCTGTTTTATCTCTGGTATCTGTCCATTGCATCAATAAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000192372.2 ENSMUST00000195515.2 |
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| CDS-3UTR GCA 90 bp | AAGCCTTTATTGATGCAATGGACAGATACCAGAGATAAAACAGCTTTGAAACCCCTATCACTTCCTGTTTaGTGCCCCCAGGCCTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: KPLLMQWTDTRDKTALKPLSLPV*CPQACS Trigger: AGAACAGGCCTGGGGGCAGCAAACAGGAAGTGATAG...GGGTTTCAAAGCTGTTTTATCTCTGGTATCTGTCCATTGCATCAATAAAGGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
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| CDS-3UTR CCA 90 bp | CCTTTATTGATGCAATGGACAGATACCAGAGATAAAACAGCTTTGAAACCCCCTTCTCCCTGTGCCTGGTaGTGTTCTTTAACACTCTGG | + |
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Preference number: 4 (lower is better) Translates to: PLLMQWTDTRDKTALKPPSPCAW*CSLTLW Trigger: CCAGAGTGTTAAAGAACACCACCAGGCACAGGGAGA...AGGGGGTTTCAAAGCTGTTTTATCTCTGGTATCTGTCCATTGCATCAATAAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
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| CDS-3UTR CCA 90 bp | GACCTCCTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGTTTCTGCTTTCTAGCCCATaGATCTCAGTCTCTCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: DLLHIFLFLRISGKRGEFLLSSP*ISVSLF Trigger: AAACAGAGAGACTGAGATCCATGGGCTAGAAAGCAG...AAACTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAGGAGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
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| CDS-3UTR TCA 90 bp | CCTTTATTGATGCAATGGACAGATACCAGAGATAAAACAGCTTTGAAACCCCCTCATGGGGCTTCACTATaGCGTCAGCAAACTCATGTT | + |
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Preference number: 4 (lower is better) Translates to: PLLMQWTDTRDKTALKPPHGASL*RQQTHV Trigger: AACATGAGTTTGCTGACGTCATAGTGAAGCCCCATG...AGGGGGTTTCAAAGCTGTTTTATCTCTGGTATCTGTCCATTGCATCAATAAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
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| CDS-3UTR GCA 90 bp | AAGCCTTTATTGATGCAATGGACAGATACCAGAGATAAAACAGCTTTGAAACCCCTGCTGTCTTCACAGTaGTGTGCTGCTCCGTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: KPLLMQWTDTRDKTALKPLLSSQ*CAAPSF Trigger: AAAAGACGGAGCAGCACAGCACTGTGAAGACAGCAG...GGGTTTCAAAGCTGTTTTATCTCTGGTATCTGTCCATTGCATCAATAAAGGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192372.2 ENSMUST00000195515.2 |
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| CDS-3UTR GCA 90 bp | AAGCCTTTATTGATGCAATGGACAGATACCAGAGATAAAACAGCTTTGAAACCCTGGCTACTCTGTGGTTaGCTCTCTGACCTCTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: KPLLMQWTDTRDKTALKPWLLCG*LSDLFC Trigger: ACAGAAGAGGTCAGAGAGGCAACCACAGAGTAGCCA...GGGTTTCAAAGCTGTTTTATCTCTGGTATCTGTCCATTGCATCAATAAAGGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192372.2 ENSMUST00000195515.2 |
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| CDS-3UTR CCA 90 bp | AAGCCTTTATTGATGCAATGGACAGATACCAGAGATAAAACAGCTTTGAAACCCGCTTTGCCCCATGCATaGCTTTGTCTGTGTACGTTC | + |
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Preference number: 4 (lower is better) Translates to: KPLLMQWTDTRDKTALKPALPHA*LCLCTF Trigger: GAACGTACACAGACAAAGCCATGCATGGGGCAAAGC...GGGTTTCAAAGCTGTTTTATCTCTGGTATCTGTCCATTGCATCAATAAAGGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
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| CDS-3UTR CCA 90 bp | AAGCCTTTATTGATGCAATGGACAGATACCAGAGATAAAACAGCTTTGAAACCCGTGTCTGTCTCAGTCTaGACCTGTCCTCCTATCACT | + |
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Preference number: 4 (lower is better) Translates to: KPLLMQWTDTRDKTALKPVSVSV*TCPPIT Trigger: AGTGATAGGAGGACAGGTCCAGACTGAGACAGACAC...GGGTTTCAAAGCTGTTTTATCTCTGGTATCTGTCCATTGCATCAATAAAGGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
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| CDS-3UTR TCA 90 bp | CCTTTATTGATGCAATGGACAGATACCAGAGATAAAACAGCTTTGAAACCCCCTCTGTCCTCCTATCACTaGCTCTTCTGTCTCATAGTT | + |
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Preference number: 4 (lower is better) Translates to: PLLMQWTDTRDKTALKPPLSSYH*LFCLIV Trigger: AACTATGAGACAGAAGAGTCAGTGATAGGAGGACAG...AGGGGGTTTCAAAGCTGTTTTATCTCTGGTATCTGTCCATTGCATCAATAAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
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| CDS-3UTR GCA 90 bp | CCTTTATTGATGCAATGGACAGATACCAGAGATAAAACAGCTTTGAAACCCCCTCCACCTCTCTGTCTTTaGTCCAGCTCTTTTGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: PLLMQWTDTRDKTALKPPPPLCL*SSSFED Trigger: ATCTTCAAAAGAGCTGGAGCAAAGACAGAGAGGTGG...AGGGGGTTTCAAAGCTGTTTTATCTCTGGTATCTGTCCATTGCATCAATAAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000192372.2 ENSMUST00000195515.2 |
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| CDS-3UTR CCA 90 bp | CTCCTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGTTTCTGGTCACTTGTGTTTGTTaGCTTATCATTTCCTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: LLHIFLFLRISGKRGEFLVTCVC*LIISCV Trigger: GACACAGGAAATGATAAGCCAACAAACACAAGTGAC...CAGAAACTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192372.2 ENSMUST00000195515.2 |
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| CDS-3UTR CCA 90 bp | TCTAAGCCTTTATTGATGCAATGGACAGATACCAGAGATAAAACAGCTTTGAAACTTGTCTTCTGTTCTTaGGGTCTGCTCCACCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: SKPLLMQWTDTRDKTALKLVFCS*GLLHLS Trigger: GGACAGGTGGAGCAGACCCCAAGAACAGAAGACAAG...TTTCAAAGCTGTTTTATCTCTGGTATCTGTCCATTGCATCAATAAAGGCTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192372.2 ENSMUST00000195515.2 |
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| CDS-3UTR CCA 90 bp | CTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGTTTCTGAGATCATGTTCCAAAGTCTaGGTATATGATCCTGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: LHIFLFLRISGKRGEFLRSCSKV*VYDPAC Trigger: ACAGGCAGGATCATATACCCAGACTTTGGAACATGA...TCTCAGAAACTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
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| CDS-3UTR TCA 90 bp | TCTAAGCCTTTATTGATGCAATGGACAGATACCAGAGATAAAACAGCTTTGAAAATCACTGCTTGGGTCTaGGCTGTAGATCCAGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SKPLLMQWTDTRDKTALKITAWV*AVDPVV Trigger: CACAACTGGATCTACAGCTCAGACCCAAGCAGTGAT...TTTCAAAGCTGTTTTATCTCTGGTATCTGTCCATTGCATCAATAAAGGCTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192372.2 |
||
| CDS-3UTR GCA 90 bp | TCTAAGCCTTTATTGATGCAATGGACAGATACCAGAGATAAAACAGCTTTGAAAGACTTCATCCACAGTTaGAGGATCATGGGGCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SKPLLMQWTDTRDKTALKDFIHS*RIMGLH Trigger: GTGAAGCCCCATGATCCTGCAACTGTGGATGAAGTC...TTTCAAAGCTGTTTTATCTCTGGTATCTGTCCATTGCATCAATAAAGGCTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
||
| CDS-3UTR CCA 90 bp | TCTAAGCCTTTATTGATGCAATGGACAGATACCAGAGATAAAACAGCTTTGAAAGTCACTTGTGTTTGTTaGCTTATCATTTCCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SKPLLMQWTDTRDKTALKVTCVC*LIISCV Trigger: GACACAGGAAATGATAAGCCAACAAACACAAGTGAC...TTTCAAAGCTGTTTTATCTCTGGTATCTGTCCATTGCATCAATAAAGGCTTAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192372.2 ENSMUST00000195515.2 |
||
| CDS TCA 90 bp | GAGCCTCTTCAACTCCTGCCTCGTGAGTACTTTGCAGCCACCCTCTaGCCTGGCATAGCACCCGAAGGCTTCGATGATCCCGTGGATGTT | + |
|
Preference number: 5 (lower is better) Translates to: EPLQLLPREYFAATL*PGIAPEGFDDPVDV Trigger: AACATCCACGGGATCATCGAAGCCTTCGGGTGCTATGCCAGGTCAGAGGGTGGCTGCAAAGTACTCACGAGGCAGGAGTTGAAGAGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
||
| CDS TCA 90 bp | GGCGCAGGACTTCATCCACAGTTGCAGGATCATGGGGCTTCACTATaGCGTCAGCAAACTCATGTTCCAGGAGCCTCTTCAACTCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GAGLHPQLQDHGASL*RQQTHVPGASSTPA Trigger: GGCAGGAGTTGAAGAGGCTCCTGGAACATGAGTTTGCTGACGTCATAGTGAAGCCCCATGATCCTGCAACTGTGGATGAAGTCCTGCGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
||
| CDS TCA 90 bp | TGTGATTCCTTTCTTCTCCATCTGTGGTATATCCTGGCCCTGAGCTaGAGGAGTACCAGAGTGCAGGCTACCTGGATCCTGGCTTCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: CDSFLLHLWYILALS*RSTRVQATWILASD Trigger: ATCCGAAGCCAGGATCCAGGTAGCCTGCACTCTGGTACTCCTTCAGCTCAGGGCCAGGATATACCACAGATGGAGAAGAAAGGAATCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
||
| CDS GCA 90 bp | CTGCCTGTGTCTGGTAGTGTCTTGTCCCCACCTGTTCTGCCTGACTaGTTTCTAGCCCATGGATCTCAGTCTCTCTGTTTTGGCCATACA | + |
|
Preference number: 5 (lower is better) Translates to: LPVSGSVLSPPVLPD*FLAHGSQSLCFGHT Trigger: TGTATGGCCAAAACAGAGAGACTGAGATCCATGGGCTAGAAAGCAGTCAGGCAGAACAGGTGGGGACAAGACACTACCAGACACAGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
||
| CDS CCA 90 bp | TCTTCATCCAACAGGCGCAGGACTTCATCCACAGTTGCAGGATCATaGGGCTTCACTATGACGTCAGCAAACTCATGTTCCAGGAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSSNRRRTSSTVAGS*GFTMTSANSCSRSL Trigger: GAGGCTCCTGGAACATGAGTTTGCTGACGTCATAGTGAAGCCCCATGATCCTGCAACTGTGGATGAAGTCCTGCGCCTGTTGGATGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
||
| CDS CCA 90 bp | TGCTTTCTAGCCCATGGATCTCAGTCTCTCTGTTTTGGCCATACATaGACCCATGAGTCTGGGTGCTACTATTTTCTGCCTGCTGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CFLAHGSQSLCFGHT*THESGCYYFLPAGS Trigger: GGAGCCAGCAGGCAGAAAATAGTAGCACCCAGACTCATGGGTCCATGTATGGCCAAAACAGAGAGACTGAGATCCATGGGCTAGAAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
||
| CDS CCA 90 bp | TGCAGGCTACCTGGATCCTGGCTTCGGATTACTATTTCCCTTGTGTaGTCATTGACCCACTCCTCTCTAACCACTGTGGGTACTCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CRLPGSWLRITISLV*SLTHSSLTTVGTLS Trigger: AGAGAGAGTACCCACAGTGGTTAGAGAGGAGTGGGTCAATGACCACACAAGGGAAATAGTAATCCGAAGCCAGGATCCAGGTAGCCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
||
| CDS-3UTR CAA 90 bp | GATGACCTCCTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGGTGCTGCTCCGTCTTTaGCCACTTCAGCACCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: DDLLHIFLFLRISGKRGEVLLRL*PLQHHL Trigger: GAGGTGGTGCTGAAGTGGCAAAAGACGGAGCAGCAC...CTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAGGAGGTCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192372.2 ENSMUST00000195515.2 |
||
| CDS GCA 90 bp | CCCTGTGTTATCTTCATCCAACAGGCGCAGGACTTCATCCACAGTTaGAGGATCATGGGGCTTCACTATGACGTCAGCAAACTCATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PCVIFIQQAQDFIHS*RIMGLHYDVSKLMF Trigger: GAACATGAGTTTGCTGACGTCATAGTGAAGCCCCATGATCCTGCAACTGTGGATGAAGTCCTGCGCCTGTTGGATGAAGATAACACAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
||
| CDS TCA 90 bp | AGTTGTGATCTCATCTGTCTGTTGGCTACTCTGTGGTTGCCTCTCTaGCCTCTTCTGTCTGGTCCAACTCTTGTCTTCTGTTCTTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SCDLICLLATLWLPL*PLLSGPTLVFCSWG Trigger: ACCCCAAGAACAGAAGACAAGAGTTGGACCAGACAGAAGAGGTCAGAGAGGCAACCACAGAGTAGCCAACAGACAGATGAGATCACAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107300.7 ENSMUST00000192372.2 ENSMUST00000195515.2 |
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| CDS TCA 90 bp | CTGGCTCCTGCCTTGTTCCATTGTCTGAGTATGTGTCTGAATATATaGCTCTCCCTGTGCCTGGTGGTGTTCTTTAACACTCTGGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LAPALFHCLSMCLNI*LSLCLVVFFNTLAC Trigger: GCAAGCCAGAGTGTTAAAGAACACCACCAGGCACAGGGAGAGTCATATATTCAGACACATACTCAGACAATGGAACAAGGCAGGAGCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
||
| CDS-3UTR CAA 90 bp | GATGACCTCCTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGTCTTGTCTTCTGTTCTaGGGGTCTGCTCCACCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: DDLLHIFLFLRISGKRGESCLLF*GSAPPV Trigger: GACAGGTGGAGCAGACCCCAAGAACAGAAGACAAGA...CTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAGGAGGTCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192372.2 ENSMUST00000195515.2 |
||
| CDS GCA 90 bp | TGGACCCATGAGTCTGGGTGCTACTATTTTCTGCCTGCTGGCTCCTaGCTTGTTCCATTGTCTGAGTATGTGTCTGAATATATGACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: WTHESGCYYFLPAGS*LVPLSEYVSEYMTL Trigger: GAGAGTCATATATTCAGACACATACTCAGACAATGGAACAAGGCAGGAGCCAGCAGGCAGAAAATAGTAGCACCCAGACTCATGGGTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
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| CDS-3UTR CAA 90 bp | GACCTCCTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGTTTGGACTTCATCCACAGTaGCAGGATCATGGGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: DLLHIFLFLRISGKRGEFGLHPQ*QDHGAS Trigger: TGAAGCCCCATGATCCTGCAACTGTGGATGAAGTCC...AAACTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAGGAGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
||
| CDS-3UTR CAA 90 bp | CCTTTATTGATGCAATGGACAGATACCAGAGATAAAACAGCTTTGAAACCCCCTGTGCTGCTCCGTCTTTaGCCACTTCAGCACCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: PLLMQWTDTRDKTALKPPVLLRL*PLQHHL Trigger: GAGGTGGTGCTGAAGTGGCAAAAGACGGAGCAGCAC...AGGGGGTTTCAAAGCTGTTTTATCTCTGGTATCTGTCCATTGCATCAATAAAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000192372.2 ENSMUST00000195515.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTGAGTTTTGACAAGAAATCACCTTGTAGAGATGATCACTCACTCCAGCTGTGCCTGGTTCCTGTCTaGGCCATGAATCACAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: EVSFDKKSPCRDDHSLQLCLVPV*AMNHSL Trigger: GAGACTGTGATTCATGGCCAAGACAGGAACCAGGCA...CAGCTGGAGTGAGTGATCATCTCTACAAGGTGATTTCTTGTCAAAACTCACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTGAGTTTTGACAAGAAATCACCTTGTAGAGATGATCACTCACTCCAGCTGTCCCTTGTGTGGTCATaGACCCACTCCTCTCTAACC | + |
|
Preference number: 5 (lower is better) Translates to: EVSFDKKSPCRDDHSLQLSLVWS*THSSLT Trigger: GGTTAGAGAGGAGTGGGTCAATGACCACACAAGGGA...CAGCTGGAGTGAGTGATCATCTCTACAAGGTGATTTCTTGTCAAAACTCACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
||
| CDS TCA 90 bp | TTTTGCCACTTCAGCACCACCTCTCTGTCTTTGCTCCAGCTCTTTTaGAGATCCAGAATAGCAGCCTTCAGACTTGTCAGATATGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: FCHFSTTSLSLLQLF*RSRIAAFRLVRYAS Trigger: GCTTGCATATCTGACAAGTCTGAAGGCTGCTATTCTGGATCTTCAAAAGAGCTGGAGCAAAGACAGAGAGGTGGTGCTGAAGTGGCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
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| CDS TCA 90 bp | CAGCTTTGCCCCATGCATGGCTTTGTCTGTGTACGTTCCTTTTCTTaGGCCACAAATTTATGTGCAGACTGGCTCCCATCATGTTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QLCPMHGFVCVRSFS*ATNLCADWLPSCSK Trigger: TTTGGAACATGATGGGAGCCAGTCTGCACATAAATTTGTGGCTCAAGAAAAGGAACGTACACAGACAAAGCCATGCATGGGGCAAAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
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| CDS-3UTR CAA 90 bp | GACCTCCTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGTTTTGTCTGGTCCAACTCTaGTCTTCTGTTCTTGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: DLLHIFLFLRISGKRGEFCLVQL*SSVLGV Trigger: GACCCCAAGAACAGAAGACAAGAGTTGGACCAGACA...AAACTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAGGAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192372.2 ENSMUST00000195515.2 |
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| CDS-3UTR CAA 90 bp | GACCTCCTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGTTTGATCTCATCTGTCTGTaGGCTACTCTGTGGTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: DLLHIFLFLRISGKRGEFDLICL*ATLWLP Trigger: AGGCAACCACAGAGTAGCCAACAGACAGATGAGATC...AAACTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAGGAGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192372.2 ENSMUST00000195515.2 |
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| CDS-3UTR CAA 90 bp | GAGGTGAGTTTTGACAAGAAATCACCTTGTAGAGATGATCACTCACTCCAGCTGGATCTCATCTGTCTGTaGGCTACTCTGTGGTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: EVSFDKKSPCRDDHSLQLDLICL*ATLWLP Trigger: AGGCAACCACAGAGTAGCCAACAGACAGATGAGATC...CAGCTGGAGTGAGTGATCATCTCTACAAGGTGATTTCTTGTCAAAACTCACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
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| CDS-3UTR CAA 90 bp | GACCTCCTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGTTTTGCATGGCTTCTGTCTaGGTGATGGCTGTTAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: DLLHIFLFLRISGKRGEFCMASV*VMAVSS Trigger: GGAACTAACAGCCATCACCAAGACAGAAGCCATGCA...AAACTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAGGAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
||
| CDS-3UTR CAA 90 bp | AAGCCTTTATTGATGCAATGGACAGATACCAGAGATAAAACAGCTTTGAAACCCGCTATCACTTCCTGTTaGCTGCCCCCAGGCCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KPLLMQWTDTRDKTALKPAITSC*LPPGLF Trigger: GAACAGGCCTGGGGGCAGCAAACAGGAAGTGATAGC...GGGTTTCAAAGCTGTTTTATCTCTGGTATCTGTCCATTGCATCAATAAAGGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
||
| CDS-3UTR CAA 90 bp | CTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGTTTCTGAGACTGCTGGCTCCTGCCTaGTTCCATTGTCTGAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: LHIFLFLRISGKRGEFLRLLAPA*FHCLSM Trigger: CATACTCAGACAATGGAACAAGGCAGGAGCCAGCAG...TCTCAGAAACTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
||
| CDS CCA 90 bp | TTCTGTCTCATAGTTGCTTACTGGTGTCCAGCTTTGCCCCATGCATaGCTTTGTCTGTGTACGTTCCTTTTCTTGAGCCACAAATTTATG | + |
|
Preference number: 5 (lower is better) Translates to: FCLIVAYWCPALPHA*LCLCTFLFLSHKFM Trigger: CATAAATTTGTGGCTCAAGAAAAGGAACGTACACAGACAAAGCCATGCATGGGGCAAAGCTGGACACCAGTAAGCAACTATGAGACAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
||
| CDS-3UTR CAA 90 bp | CTCCTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGTTTCTGCACCTGTCCTGTCACTaGTGTTTGTTGGCTTATCAT | + |
|
Preference number: 5 (lower is better) Translates to: LLHIFLFLRISGKRGEFLHLSCH*CLLAYH Trigger: ATGATAAGCCAACAAACACAAGTGACAGGACAGGTG...CAGAAACTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192372.2 ENSMUST00000195515.2 |
||
| CDS-3UTR CAA 90 bp | CTCCTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGTTTCTGTCCTGCCTTGTTCCATaGTCTGAGTATGTGTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLHIFLFLRISGKRGEFLSCLVP*SEYVSE Trigger: TTCAGACACATACTCAGACAATGGAACAAGGCAGGA...CAGAAACTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
||
| CDS-3UTR CAA 90 bp | GACCTCCTCCACATCTTCCTGTTTCTGAGAATATCAGGTAAGAGAGGTGAGTTTTCCTGTCACTTGTGTTaGTTGGCTTATCATTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: DLLHIFLFLRISGKRGEFSCHLC*LAYHFL Trigger: CAGGAAATGATAAGCCAACAAACACAAGTGACAGGA...AAACTCACCTCTCTTACCTGATATTCTCAGAAACAGGAAGATGTGGAGGAGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192372.2 ENSMUST00000195515.2 |
||
| CDS-3UTR CAA 90 bp | CCTTTATTGATGCAATGGACAGATACCAGAGATAAAACAGCTTTGAAACCCCCTCACCTGTCCTGTCACTaGTGTTTGTTGGCTTATCAT | + |
|
Preference number: 5 (lower is better) Translates to: PLLMQWTDTRDKTALKPPHLSCH*CLLAYH Trigger: ATGATAAGCCAACAAACACAAGTGACAGGACAGGTG...AGGGGGTTTCAAAGCTGTTTTATCTCTGGTATCTGTCCATTGCATCAATAAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000192372.2 ENSMUST00000195515.2 |
||
| CDS-3UTR CAA 90 bp | TCTAAGCCTTTATTGATGCAATGGACAGATACCAGAGATAAAACAGCTTTGAAATCTTGTCTTCTGTTCTaGGGGTCTGCTCCACCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SKPLLMQWTDTRDKTALKSCLLF*GSAPPV Trigger: GACAGGTGGAGCAGACCCCAAGAACAGAAGACAAGA...TTTCAAAGCTGTTTTATCTCTGGTATCTGTCCATTGCATCAATAAAGGCTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192372.2 ENSMUST00000195515.2 |
||
| CDS-3UTR CAA 90 bp | TCTAAGCCTTTATTGATGCAATGGACAGATACCAGAGATAAAACAGCTTTGAAATGTCTGGTCCAACTCTaGTCTTCTGTTCTTGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SKPLLMQWTDTRDKTALKCLVQL*SSVLGV Trigger: GACCCCAAGAACAGAAGACAAGAGTTGGACCAGACA...TTTCAAAGCTGTTTTATCTCTGGTATCTGTCCATTGCATCAATAAAGGCTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192372.2 ENSMUST00000195515.2 |
||
| CDS-3UTR CAA 90 bp | CCTTTATTGATGCAATGGACAGATACCAGAGATAAAACAGCTTTGAAACCCCCTTGTACGTTCCTTTTCTaGAGCCACAAATTTATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PLLMQWTDTRDKTALKPPCTFLF*SHKFMC Trigger: GCACATAAATTTGTGGCTCAAGAAAAGGAACGTACA...AGGGGGTTTCAAAGCTGTTTTATCTCTGGTATCTGTCCATTGCATCAATAAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
||
| CDS-3UTR CAA 90 bp | TCTAAGCCTTTATTGATGCAATGGACAGATACCAGAGATAAAACAGCTTTGAAAAAGACTAGGAATTCCTaGAACTCTACAGTCCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SKPLLMQWTDTRDKTALKKTRNS*NSTVPV Trigger: CACAGGGACTGTAGAGTTCAAGGAATTCCTAGTCTT...TTTCAAAGCTGTTTTATCTCTGGTATCTGTCCATTGCATCAATAAAGGCTTAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195515.2 |
||
| CDS TCA 72 bp | CAACTCCTGCCTCGTGAGTACTTTGCAGCCACCCTCTaGCCTGGCATAGCACCCGAAGGCTTCGATGATCCC | + |
|
Preference number: 6 (lower is better) Translates to: QLLPREYFAATL*PGIAPEGFDDP Trigger: GGGATCATCGAAGCCTTCGGGTGCTATGCCAGGTCAGAGGGTGGCTGCAAAGTACTCACGAGGCAGGAGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
||
| CDS GCA 72 bp | GCTGCTGTCTTCACAGTGCTGTGCTGCTCCGTCTTTTaGCACTTCAGCACCACCTCTCTGTCTTTGCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: AAVFTVLCCSVF*HFSTTSLSLLQ Trigger: CTGGAGCAAAGACAGAGAGGTGGTGCTGAAGTGGCAAAAGACGGAGCAGCACAGCACTGTGAAGACAGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107300.7 ENSMUST00000192372.2 ENSMUST00000195515.2 |
||
| CDS GCA 72 bp | TCTCTGTCCACAGCTGCTGTCTTCACAGTGCTGTGCTaGTCCGTCTTTTGCCACTTCAGCACCACCTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLSTAAVFTVLC*SVFCHFSTTSL Trigger: CAGAGAGGTGGTGCTGAAGTGGCAAAAGACGGAGCAGCACAGCACTGTGAAGACAGCAGCTGTGGACAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107300.7 ENSMUST00000192372.2 ENSMUST00000195515.2 |
||
| CDS TCA 72 bp | GTATGTGTCCCAACCCTGTCCTGTCCTCTAGAAGCCTaGTCTCTCTGTCCACAGCTGCTGTCTTCACAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: VCVPTLSCPLEA*SLCPQLLSSQC Trigger: GCACTGTGAAGACAGCAGCTGTGGACAGAGAGATCAGGCTTCTAGAGGACAGGACAGGGTTGGGACACATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107300.7 ENSMUST00000192372.2 ENSMUST00000195515.2 |
||
| CDS GCA 72 bp | ATCTCTCTGTCCACAGCTGCTGTCTTCACAGTGCTGTaGTGCTCCGTCTTTTGCCACTTCAGCACCACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ISLSTAAVFTVL*CSVFCHFSTTS Trigger: AGAGGTGGTGCTGAAGTGGCAAAAGACGGAGCAGCACAGCACTGTGAAGACAGCAGCTGTGGACAGAGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107300.7 ENSMUST00000192372.2 ENSMUST00000195515.2 |
||
| CDS CAA 72 bp | AGCTGCTGTCTTCACAGTGCTGTGCTGCTCCGTCTTTaGCCACTTCAGCACCACCTCTCTGTCTTTGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SCCLHSAVLLRL*PLQHHLSVFAP Trigger: TGGAGCAAAGACAGAGAGGTGGTGCTGAAGTGGCAAAAGACGGAGCAGCACAGCACTGTGAAGACAGCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107300.7 ENSMUST00000192372.2 ENSMUST00000195515.2 |
||
| CDS CAA 72 bp | GGTTGCCTCTCTGACCTCTTCTGTCTGGTCCAACTCTaGTCTTCTGTTCTTGGGGTCTGCTCCACCTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GCLSDLFCLVQL*SSVLGVCSTCP Trigger: AGGACAGGTGGAGCAGACCCCAAGAACAGAAGACAAGAGTTGGACCAGACAGAAGAGGTCAGAGAGGCAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107300.7 ENSMUST00000192372.2 ENSMUST00000195515.2 |
||
| CDS CAA 72 bp | GATAGACCCCTGTGTCTGGATGCTATCACTTCCTGTTaGCTGCCCCCAGGCCTGTTCTACCATCTGTGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: DRPLCLDAITSC*LPPGLFYHLCV Trigger: CACACACAGATGGTAGAACAGGCCTGGGGGCAGCAAACAGGAAGTGATAGCATCCAGACACAGGGGTCTATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
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| CDS TCA 72 bp | TTTCTTCTCCATCTGTGGTATATCCTGGCCCTGAGCTaGAGGAGTACCAGAGTGCAGGCTACCTGGATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: FLLHLWYILALS*RSTRVQATWIL Trigger: CAGGATCCAGGTAGCCTGCACTCTGGTACTCCTTCAGCTCAGGGCCAGGATATACCACAGATGGAGAAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
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| CDS GCA 72 bp | TCCCTGTGCCTGGTGGTGTTCTTTAACACTCTGGCTTaGCTGGTTCCTGTCTTGGCCATGAATCACAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SLCLVVFFNTLA*LVPVLAMNHSL Trigger: GAGACTGTGATTCATGGCCAAGACAGGAACCAGGCAAGCCAGAGTGTTAAAGAACACCACCAGGCACAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
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| CDS CCA 72 bp | GGCTACTCTGTGGTTGCCTCTCTGACCTCTTCTGTCTaGTCCAACTCTTGTCTTCTGTTCTTGGGGTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GYSVVASLTSSV*SNSCLLFLGSA Trigger: AGCAGACCCCAAGAACAGAAGACAAGAGTTGGACCAGACAGAAGAGGTCAGAGAGGCAACCACAGAGTAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107300.7 ENSMUST00000192372.2 ENSMUST00000195515.2 |
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| CDS CAA 90 bp | GCCTCTCTGACCTCTTCTGTCTGGTCCAACTCTTGTCTTCTGTTCTaGGGGTCTGCTCCACCTGTCCTGTCACTTGTGTTTGTTGGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: ASLTSSVWSNSCLLF*GSAPPVLSLVFVGL Trigger: TAAGCCAACAAACACAAGTGACAGGACAGGTGGAGCAGACCCCAAGAACAGAAGACAAGAGTTGGACCAGACAGAAGAGGTCAGAGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107300.7 ENSMUST00000192372.2 ENSMUST00000195515.2 |
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| CDS CAA 90 bp | CTGGTCATAGATAGACCCCTGTGTCTGGATGCTATCACTTCCTGTTaGCTGCCCCCAGGCCTGTTCTACCATCTGTGTGTGTATCTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: LVIDRPLCLDAITSC*LPPGLFYHLCVYLS Trigger: ACTCAGATACACACACAGATGGTAGAACAGGCCTGGGGGCAGCAAACAGGAAGTGATAGCATCCAGACACAGGGGTCTATCTATGACCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
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| CDS CAA 90 bp | TGCCTGGTGGTGTTCTTTAACACTCTGGCTTGCCTGGTTCCTGTCTaGGCCATGAATCACAGTCTCAGTGCTCTGGTCATAGATAGACCC | + |
|
Preference number: 6 (lower is better) Translates to: CLVVFFNTLACLVPV*AMNHSLSALVIDRP Trigger: GGGTCTATCTATGACCAGAGCACTGAGACTGTGATTCATGGCCAAGACAGGAACCAGGCAAGCCAGAGTGTTAAAGAACACCACCAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
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| CDS CAA 90 bp | CTACCTGGATCCTGGCTTCGGATTACTATTTCCCTTGTGTGGTCATaGACCCACTCCTCTCTAACCACTGTGGGTACTCTCTCTACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LPGSWLRITISLVWS*THSSLTTVGTLSTC Trigger: GCAGGTAGAGAGAGTACCCACAGTGGTTAGAGAGGAGTGGGTCAATGACCACACAAGGGAAATAGTAATCCGAAGCCAGGATCCAGGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
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| CDS TCA 72 bp | AGACTGGCTCCCATCATGTTCCAAAGTCTGGGTATATaGTCCTGCCTGTGTCTGGTAGTGTCTTGTCCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: RLAPIMFQSLGI*SCLCLVVSCPH Trigger: GTGGGGACAAGACACTACCAGACACAGGCAGGATCATATACCCAGACTTTGGAACATGATGGGAGCCAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
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| CDS CCA 72 bp | AACAGGCGCAGGACTTCATCCACAGTTGCAGGATCATaGGGCTTCACTATGACGTCAGCAAACTCATGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: NRRRTSSTVAGS*GFTMTSANSCS Trigger: GGAACATGAGTTTGCTGACGTCATAGTGAAGCCCCATGATCCTGCAACTGTGGATGAAGTCCTGCGCCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
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| CDS CCA 72 bp | CCTCTTCTGTCTGGTCCAACTCTTGTCTTCTGTTCTTaGGGTCTGCTCCACCTGTCCTGTCACTTGTGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: PLLSGPTLVFCS*GLLHLSCHLCL Trigger: CAAACACAAGTGACAGGACAGGTGGAGCAGACCCCAAGAACAGAAGACAAGAGTTGGACCAGACAGAAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107300.7 ENSMUST00000192372.2 ENSMUST00000195515.2 |
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| CDS CCA 72 bp | TGTGGGTACTCTCTCTACCTGCCTGGCTGTCGGGCTTaGGTGATTCTCTATAATAGTGTCTGTCTCAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: CGYSLYLPGCRA*VILYNSVCLSL Trigger: CAGACTGAGACAGACACTATTATAGAGAATCACCCAAGCCCGACAGCCAGGCAGGTAGAGAGAGTACCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
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| CDS CCA 72 bp | CCTGGATCCTGGCTTCGGATTACTATTTCCCTTGTGTaGTCATTGACCCACTCCTCTCTAACCACTGTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PGSWLRITISLV*SLTHSSLTTVG Trigger: ACCCACAGTGGTTAGAGAGGAGTGGGTCAATGACCACACAAGGGAAATAGTAATCCGAAGCCAGGATCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
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| CDS CCA 72 bp | GCTGAAGGAGTACCAGAGTGCAGGCTACCTGGATCCTaGCTTCGGATTACTATTTCCCTTGTGTGGTCATTG | + |
|
Preference number: 6 (lower is better) Translates to: AEGVPECRLPGS*LRITISLVWSL Trigger: CAATGACCACACAAGGGAAATAGTAATCCGAAGCCAGGATCCAGGTAGCCTGCACTCTGGTACTCCTTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
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| CDS CAA 90 bp | GTCTTCTGTTCTTGGGGTCTGCTCCACCTGTCCTGTCACTTGTGTTaGTTGGCTTATCATTTCCTGTGTCTGAGACTCAGTCTGCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VFCSWGLLHLSCHLC*LAYHFLCLRLSLPV Trigger: GACAGGCAGACTGAGTCTCAGACACAGGAAATGATAAGCCAACAAACACAAGTGACAGGACAGGTGGAGCAGACCCCAAGAACAGAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107300.7 ENSMUST00000192372.2 ENSMUST00000195515.2 |
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| CDS CAA 90 bp | CTGTGTGTGTATCTGAGTATGAGACCCTGCCTGTGTCTGGTAGTGTaGTGTAGAAGCTCTGTCTGCATGGCTTCTGTCTTGGTGATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LCVYLSMRPCLCLVV*CRSSVCMASVLVMA Trigger: AGCCATCACCAAGACAGAAGCCATGCAGACAGAGCTTCTACACAACACTACCAGACACAGGCAGGGTCTCATACTCAGATACACACACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
||
| CDS TCA 72 bp | CTTCATCCACAGTTGCAGGATCATGGGGCTTCACTATaGCGTCAGCAAACTCATGTTCCAGGAGCCTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LHPQLQDHGASL*RQQTHVPGASS Trigger: TGAAGAGGCTCCTGGAACATGAGTTTGCTGACGTCATAGTGAAGCCCCATGATCCTGCAACTGTGGATGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
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| CDS TCA 72 bp | ATCTCAGTCTCTCTGTTTTGGCCATACATGGACCCATaGGTCTGGGTGCTACTATTTTCTGCCTGCTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ISVSLFWPYMDP*VWVLLFSACWL Trigger: GAGCCAGCAGGCAGAAAATAGTAGCACCCAGACTCATGGGTCCATGTATGGCCAAAACAGAGAGACTGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
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| CDS GCA 72 bp | ATCTTCATCCAACAGGCGCAGGACTTCATCCACAGTTaGAGGATCATGGGGCTTCACTATGACGTCAGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: IFIQQAQDFIHS*RIMGLHYDVSK Trigger: TTTGCTGACGTCATAGTGAAGCCCCATGATCCTGCAACTGTGGATGAAGTCCTGCGCCTGTTGGATGAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
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| CDS GCA 72 bp | TGTCTGGTCCAACTCTTGTCTTCTGTTCTTGGGGTCTaGTCCACCTGTCCTGTCACTTGTGTTTGTTGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: CLVQLLSSVLGV*STCPVTCVCWL Trigger: AAGCCAACAAACACAAGTGACAGGACAGGTGGAGCAGACCCCAAGAACAGAAGACAAGAGTTGGACCAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107300.7 ENSMUST00000192372.2 ENSMUST00000195515.2 |
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| CDS GCA 72 bp | GTTGTGATCTCATCTGTCTGTTGGCTACTCTGTGGTTaGCTCTCTGACCTCTTCTGTCTGGTCCAACTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VVISSVCWLLCG*LSDLFCLVQLL Trigger: CAAGAGTTGGACCAGACAGAAGAGGTCAGAGAGGCAACCACAGAGTAGCCAACAGACAGATGAGATCACAAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107300.7 ENSMUST00000192372.2 ENSMUST00000195515.2 |
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| CDS GCA 72 bp | TGCCTGTGTCTGGTAGTGTTGTGTAGAAGCTCTGTCTaGATGGCTTCTGTCTTGGTGATGGCTGTTAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: CLCLVVLCRSSV*MASVLVMAVSS Trigger: GGAACTAACAGCCATCACCAAGACAGAAGCCATGCAGACAGAGCTTCTACACAACACTACCAGACACAGGCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
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| CDS GCA 72 bp | TCTGGTAGTGTCTTGTCCCCACCTGTTCTGCCTGACTaGTTTCTAGCCCATGGATCTCAGTCTCTCTGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SGSVLSPPVLPD*FLAHGSQSLCF Trigger: AAAACAGAGAGACTGAGATCCATGGGCTAGAAAGCAGTCAGGCAGAACAGGTGGGGACAAGACACTACCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
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| CDS CCA 72 bp | GCCCATGGATCTCAGTCTCTCTGTTTTGGCCATACATaGACCCATGAGTCTGGGTGCTACTATTTTCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: AHGSQSLCFGHT*THESGCYYFLP Trigger: AGGCAGAAAATAGTAGCACCCAGACTCATGGGTCCATGTATGGCCAAAACAGAGAGACTGAGATCCATGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
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| CDS CAA 72 bp | TGGGGTCTGCTCCACCTGTCCTGTCACTTGTGTTTGTaGGCTTATCATTTCCTGTGTCTGAGACTCAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: WGLLHLSCHLCL*AYHFLCLRLSL Trigger: CAGACTGAGTCTCAGACACAGGAAATGATAAGCCAACAAACACAAGTGACAGGACAGGTGGAGCAGACCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107300.7 ENSMUST00000192372.2 ENSMUST00000195515.2 |
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| CDS CAA 72 bp | ACCTCTTCTGTCTGGTCCAACTCTTGTCTTCTGTTCTaGGGGTCTGCTCCACCTGTCCTGTCACTTGTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: TSSVWSNSCLLF*GSAPPVLSLVF Trigger: AAACACAAGTGACAGGACAGGTGGAGCAGACCCCAAGAACAGAAGACAAGAGTTGGACCAGACAGAAGAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107300.7 ENSMUST00000192372.2 ENSMUST00000195515.2 |
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| CDS CAA 72 bp | GTCACAGGTAGACCCCTGTGTGTAGAAGTTACCTGCTaGGGTCTGAGCTGTAGATCCAGTTGTGATCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: VTGRPLCVEVTC*GLSCRSSCDLI Trigger: GATGAGATCACAACTGGATCTACAGCTCAGACCCAAGCAGGTAACTTCTACACACAGGGGTCTACCTGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
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| CDS CAA 72 bp | TCCTGGCTTCGGATTACTATTTCCCTTGTGTGGTCATaGACCCACTCCTCTCTAACCACTGTGGGTACTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SWLRITISLVWS*THSSLTTVGTL Trigger: GAGAGTACCCACAGTGGTTAGAGAGGAGTGGGTCAATGACCACACAAGGGAAATAGTAATCCGAAGCCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
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| CDS CAA 90 bp | TTCTGTTCTTGGGGTCTGCTCCACCTGTCCTGTCACTTGTGTTTGTaGGCTTATCATTTCCTGTGTCTGAGACTCAGTCTGCCTGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: FCSWGLLHLSCHLCL*AYHFLCLRLSLPVM Trigger: CATGACAGGCAGACTGAGTCTCAGACACAGGAAATGATAAGCCAACAAACACAAGTGACAGGACAGGTGGAGCAGACCCCAAGAACAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107300.7 ENSMUST00000192372.2 ENSMUST00000195515.2 |
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| CDS CAA 90 bp | TCTGGGTGCTACTATTTTCTGCCTGCTGGCTCCTGCCTTGTTCCATaGTCTGAGTATGTGTCTGAATATATGACTCTCCCTGTGCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SGCYYFLPAGSCLVP*SEYVSEYMTLPVPG Trigger: ACCAGGCACAGGGAGAGTCATATATTCAGACACATACTCAGACAATGGAACAAGGCAGGAGCCAGCAGGCAGAAAATAGTAGCACCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
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| CDS CCA 72 bp | ATAGTTGCTTACTGGTGTCCAGCTTTGCCCCATGCATaGCTTTGTCTGTGTACGTTCCTTTTCTTGAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: IVAYWCPALPHA*LCLCTFLFLSH Trigger: GTGGCTCAAGAAAAGGAACGTACACAGACAAAGCCATGCATGGGGCAAAGCTGGACACCAGTAAGCAACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
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| CDS CAA 72 bp | TCTTGGGGTCTGCTCCACCTGTCCTGTCACTTGTGTTaGTTGGCTTATCATTTCCTGTGTCTGAGACTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SWGLLHLSCHLC*LAYHFLCLRLS Trigger: ACTGAGTCTCAGACACAGGAAATGATAAGCCAACAAACACAAGTGACAGGACAGGTGGAGCAGACCCCAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107300.7 ENSMUST00000192372.2 ENSMUST00000195515.2 |
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| CDS CAA 72 bp | GTGTTCTTTAACACTCTGGCTTGCCTGGTTCCTGTCTaGGCCATGAATCACAGTCTCAGTGCTCTGGTCATA | + |
|
Preference number: 6 (lower is better) Translates to: VFFNTLACLVPV*AMNHSLSALVI Trigger: TATGACCAGAGCACTGAGACTGTGATTCATGGCCAAGACAGGAACCAGGCAAGCCAGAGTGTTAAAGAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
||
| CDS CAA 72 bp | CCCCATGCATGGCTTTGTCTGTGTACGTTCCTTTTCTaGAGCCACAAATTTATGTGCAGACTGGCTCCCATC | + |
|
Preference number: 6 (lower is better) Translates to: PHAWLCLCTFLF*SHKFMCRLAPI Trigger: GATGGGAGCCAGTCTGCACATAAATTTGTGGCTCAAGAAAAGGAACGTACACAGACAAAGCCATGCATGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
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| CDS CAA 72 bp | CTCTTCTGTCTCATAGTTGCTTACTGGTGTCCAGCTTaGCCCCATGCATGGCTTTGTCTGTGTACGTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LFCLIVAYWCPA*PHAWLCLCTFL Trigger: AAGGAACGTACACAGACAAAGCCATGCATGGGGCAAAGCTGGACACCAGTAAGCAACTATGAGACAGAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
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| CDS CAA 90 bp | ACTCTTGTCTTCTGTTCTTGGGGTCTGCTCCACCTGTCCTGTCACTaGTGTTTGTTGGCTTATCATTTCCTGTGTCTGAGACTCAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: TLVFCSWGLLHLSCH*CLLAYHFLCLRLSL Trigger: CAGACTGAGTCTCAGACACAGGAAATGATAAGCCAACAAACACAAGTGACAGGACAGGTGGAGCAGACCCCAAGAACAGAAGACAAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107300.7 ENSMUST00000192372.2 ENSMUST00000195515.2 |
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| CDS CAA 90 bp | CTTTTGCCACTTCAGCACCACCTCTCTGTCTTTGCTCCAGCTCTTTaGAAGATCCAGAATAGCAGCCTTCAGACTTGTCAGATATGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LLPLQHHLSVFAPAL*KIQNSSLQTCQICK Trigger: CTTGCATATCTGACAAGTCTGAAGGCTGCTATTCTGGATCTTCAAAAGAGCTGGAGCAAAGACAGAGAGGTGGTGCTGAAGTGGCAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
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| CDS CAA 90 bp | TCTGTTATAGTCACAGGTAGACCCCTGTGTGTAGAAGTTACCTGCTaGGGTCTGAGCTGTAGATCCAGTTGTGATCTCATCTGTCTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SVIVTGRPLCVEVTC*GLSCRSSCDLICLL Trigger: CAACAGACAGATGAGATCACAACTGGATCTACAGCTCAGACCCAAGCAGGTAACTTCTACACACAGGGGTCTACCTGTGACTATAACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
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| CDS GCA 72 bp | TTCTACCATCTGTGTGTGTATCTGAGTATGAGACCCTaGCTGTGTCTGGTAGTGTTGTGTAGAAGCTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: FYHLCVYLSMRP*LCLVVLCRSSV Trigger: GACAGAGCTTCTACACAACACTACCAGACACAGGCAGGGTCTCATACTCAGATACACACACAGATGGTAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
||
| CDS GCA 72 bp | GAGTCTGGGTGCTACTATTTTCTGCCTGCTGGCTCCTaGCTTGTTCCATTGTCTGAGTATGTGTCTGAATAT | + |
|
Preference number: 6 (lower is better) Translates to: ESGCYYFLPAGS*LVPLSEYVSEY Trigger: ATATTCAGACACATACTCAGACAATGGAACAAGGCAGGAGCCAGCAGGCAGAAAATAGTAGCACCCAGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
||
| CDS CAA 90 bp | TTAAAGCAAGCCCGTGCAACTTTAAACACCAAGACTAGGAATTCCTaGAACTCTACAGTCCCTGTGTTATCTTCATCCAACAGGCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LKQARATLNTKTRNS*NSTVPVLSSSNRRR Trigger: CCTGCGCCTGTTGGATGAAGATAACACAGGGACTGTAGAGTTCAAGGAATTCCTAGTCTTGGTGTTTAAAGTTGCACGGGCTTGCTTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
||
| CDS TCA 72 bp | GCTCTGTCTTCAAGTAGGTATATAGTCCCTTGGCTGTaGTTCCTTTCTTCTCCATCTGTGGTATATCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ALSSSRYIVPWL*FLSSPSVVYPG Trigger: GCCAGGATATACCACAGATGGAGAAGAAAGGAATCACAGCCAAGGGACTATATACCTACTTGAAGACAGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
||
| CDS TCA 72 bp | GCCTTGTTCCATTGTCTGAGTATGTGTCTGAATATATaGCTCTCCCTGTGCCTGGTGGTGTTCTTTAACACT | + |
|
Preference number: 6 (lower is better) Translates to: ALFHCLSMCLNI*LSLCLVVFFNT Trigger: AGTGTTAAAGAACACCACCAGGCACAGGGAGAGTCATATATTCAGACACATACTCAGACAATGGAACAAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
||
| CDS CAA 72 bp | GCCCGTGCAACTTTAAACACCAAGACTAGGAATTCCTaGAACTCTACAGTCCCTGTGTTATCTTCATCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: ARATLNTKTRNS*NSTVPVLSSSN Trigger: GTTGGATGAAGATAACACAGGGACTGTAGAGTTCAAGGAATTCCTAGTCTTGGTGTTTAAAGTTGCACGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
||
| CDS CAA 72 bp | TACTATTTTCTGCCTGCTGGCTCCTGCCTTGTTCCATaGTCTGAGTATGTGTCTGAATATATGACTCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: YYFLPAGSCLVP*SEYVSEYMTLP Trigger: AGGGAGAGTCATATATTCAGACACATACTCAGACAATGGAACAAGGCAGGAGCCAGCAGGCAGAAAATAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107300.7 ENSMUST00000195515.2 |
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