Pregenerated sensors for CRNKL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001767Ensembl transcript IDs: ENSMUST00000001818.5
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GCCTCAGCATCCGTGAATGCAGGCCATTGTTTTCTAAACAAGCTACTACAAAACCTGGAGAATGGACCTTaGACACTGAGTTTAGTCTGC | + |
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Preference number: 2 (lower is better) Translates to: ASASVNAGHCFLNKLLQNLENGP*TLSLVC Trigger: GCAGACTAAACTCAGTGTTCAAGGTCCATTCTCCAG...GTTTTGTAGTAGCTTGTTTAGAAAACAATGGCCTGCATTCACGGATGCTGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| 3UTR-3UTR CCA 90 bp | AGTAGGGGCAGGGGAAGGTGTGCTGTTGGAACAAGATTGACATCAGCATACTCCAAAACTGAAAATCAATaGAAACGTACAGCCACCACA | + |
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Preference number: 2 (lower is better) Translates to: SRGRGRCAVGTRLTSAYSKTENQ*KRTATT Trigger: TGTGGTGGCTGTACGTTTCCATTGATTTTCAGTTTT...GGAGTATGCTGATGTCAATCTTGTTCCAACAGCACACCTTCCCCTGCCCCTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| 3UTR CAA 90 bp | GAACACCATCATGATAAACCTGTGTCTATTCCTGGAGAATGGACCTaGAACACTGAGTTTAGTCTGCAGTTCGACCCAACGTATGTGCTA | + |
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Preference number: 2 (lower is better) Translates to: EHHHDKPVSIPGEWT*NTEFSLQFDPTYVL Trigger: TAGCACATACGTTGGGTCGAACTGCAGACTAAACTCAGTGTTCAAGGTCCATTCTCCAGGAATAGACACAGGTTTATCATGATGGTGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| 3UTR-3UTR CCA 90 bp | TGCTTGTTTGAGAAAACTGAAAATCAATGGAAACGTACAGCCACCACATGGAGGACCTGTGTCTATTCCTaGAGAATGGACCTTGAACAC | + |
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Preference number: 2 (lower is better) Translates to: CLFEKTENQWKRTATTWRTCVYS*RMDLEH Trigger: GTGTTCAAGGTCCATTCTCCAGGAATAGACACAGGT...CCTCCATGTGGTGGCTGTACGTTTCCATTGATTTTCAGTTTTCTCAAACAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| 3UTR-3UTR TCA 90 bp | ACAAGATTGACATCAGCATACTCCTTTTCTAATGGAATCATCAAAATGAGGTGCTATGTGCTAAGCACATaGACTCCATCTAACAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: TRLTSAYSFSNGIIKMRCYVLST*TPSNKD Trigger: GTCTTTGTTAGATGGAGTTCATGTGCTTAGCACATA...GCACCTCATTTTGATGATTCCATTAGAAAAGGAGTATGCTGATGTCAATCTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| 3UTR-3UTR TCA 90 bp | AAACATCAGTTGTTAGAATTCACACATTCTGAGGCATGTTGGGAGATACATAGTAAACTAAAATGTTCCTaGCAAAGACTTGGGGTCAAA | + |
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Preference number: 2 (lower is better) Translates to: KHQLLEFTHSEACWEIHSKLKCS*QRLGVK Trigger: TTTGACCCCAAGTCTTTGTCAGGAACATTTTAGTTT...ACTATGTATCTCCCAACATGCCTCAGAATGTGTGAATTCTAACAACTGATGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| 3UTR TCA 72 bp | AGTCTGCAGTTCGACCCAACGTATGTGCTAAGCACATaGACTCCATCTAACAAAGACAATAGGAGCAAATGC | + |
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Preference number: 3 (lower is better) Translates to: SLQFDPTYVLST*TPSNKDNRSKC Trigger: GCATTTGCTCCTATTGTCTTTGTTAGATGGAGTTCATGTGCTTAGCACATACGTTGGGTCGAACTGCAGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| 3UTR CCA 72 bp | CACCATCATGATAAACCTGTGTCTATTCCTGGAGAATaGACCTTGAACACTGAGTTTAGTCTGCAGTTCGAC | + |
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Preference number: 3 (lower is better) Translates to: HHHDKPVSIPGE*TLNTEFSLQFD Trigger: GTCGAACTGCAGACTAAACTCAGTGTTCAAGGTCCATTCTCCAGGAATAGACACAGGTTTATCATGATGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| 3UTR-3UTR CAA 90 bp | TGCCTCAGCATCCGTGAATGCAGGCCATTGTTTTCTAAACAAGCTACTACAAAAATGGAGGTGTTAGAGTaGGACTCCAGTTTTGTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: CLSIRECRPLFSKQATTKMEVLE*DSSFVV Trigger: AACCACAAAACTGGAGTCCAACTCTAACACCTCCAT...TTTTGTAGTAGCTTGTTTAGAAAACAATGGCCTGCATTCACGGATGCTGAGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| 3UTR GCA 72 bp | ATAAATCCAATAGGACACTGCCTCAGCATCCGTGAATaGAGGCCATTGTTTTCTAAACAAGCTACTACAAAA | + |
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Preference number: 3 (lower is better) Translates to: INPIGHCLSIRE*RPLFSKQATTK Trigger: TTTTGTAGTAGCTTGTTTAGAAAACAATGGCCTGCATTCACGGATGCTGAGGCAGTGTCCTATTGGATTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| 3UTR GCA 72 bp | AACACAGACATTTACATAATAAATCCAATAGGACACTaGCTCAGCATCCGTGAATGCAGGCCATTGTTTTCT | + |
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Preference number: 3 (lower is better) Translates to: NTDIYIINPIGH*LSIRECRPLFS Trigger: AGAAAACAATGGCCTGCATTCACGGATGCTGAGGCAGTGTCCTATTGGATTTATTATGTAAATGTCTGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR TCA 90 bp | AGTAGGGGCAGGGGAAGGTGTGCTGTTGGAACAAGATTGACATCAGCATACTCCCGCGTGGCAGAGTTGTaGTGGCACGGTCCCAGATGT | + |
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Preference number: 4 (lower is better) Translates to: SRGRGRCAVGTRLTSAYSRVAEL*WHGPRC Trigger: ACATCTGGGACCGTGCCATCACAACTCTGCCACGCG...GGAGTATGCTGATGTCAATCTTGTTCCAACAGCACACCTTCCCCTGCCCCTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR CCA 90 bp | AGTAGGGGCAGGGGAAGGTGTGCTGTTGGAACAAGATTGACATCAGCATACTCCGGATGGGTGGCACATTaGCAATGGCTCTCTCATAGA | + |
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Preference number: 4 (lower is better) Translates to: SRGRGRCAVGTRLTSAYSGWVAH*QWLSHR Trigger: TCTATGAGAGAGCCATTGCCAATGTGCCACCCATCC...GGAGTATGCTGATGTCAATCTTGTTCCAACAGCACACCTTCCCCTGCCCCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR GCA 90 bp | TGCCTCAGCATCCGTGAATGCAGGCCATTGTTTTCTAAACAAGCTACTACAAAAGCCTGCTCCTCAGGCTaGCATTCCATCCAGCGCTCA | + |
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Preference number: 4 (lower is better) Translates to: CLSIRECRPLFSKQATTKACSSG*HSIQRS Trigger: TGAGCGCTGGATGGAATGGCAGCCTGAGGAGCAGGC...TTTTGTAGTAGCTTGTTTAGAAAACAATGGCCTGCATTCACGGATGCTGAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR CCA 90 bp | TGCCTCAGCATCCGTGAATGCAGGCCATTGTTTTCTAAACAAGCTACTACAAAACAGCGCTCAAACACCTaGCGGGCACCAGCAACGTTG | + |
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Preference number: 4 (lower is better) Translates to: CLSIRECRPLFSKQATTKQRSNT*RAPATL Trigger: CAACGTTGCTGGTGCCCGCCAGGTGTTTGAGCGCTG...TTTTGTAGTAGCTTGTTTAGAAAACAATGGCCTGCATTCACGGATGCTGAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR CCA 90 bp | CACCATCATGATAAACCTGTGTCTATTCCTGGAGAATGGACCTTGAACACTGAGCAAAGCGTTCATAGATaGTGCGGGCCCGCTCCACCT | + |
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Preference number: 4 (lower is better) Translates to: HHHDKPVSIPGEWTLNTEQSVHR*CGPAPP Trigger: AGGTGGAGCGGGCCCGCACCATCTATGAACGCTTTG...CTCAGTGTTCAAGGTCCATTCTCCAGGAATAGACACAGGTTTATCATGATGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR TCA 90 bp | TGCCTCAGCATCCGTGAATGCAGGCCATTGTTTTCTAAACAAGCTACTACAAAATCTGTGATCTTCTGCTaGGGTGGAGGTGGGAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: CLSIRECRPLFSKQATTKSVIFC*GGGGRS Trigger: GCTCCTCCCACCTCCACCTCAGCAGAAGATCACAGA...TTTTGTAGTAGCTTGTTTAGAAAACAATGGCCTGCATTCACGGATGCTGAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR CCA 90 bp | TGCCTCAGCATCCGTGAATGCAGGCCATTGTTTTCTAAACAAGCTACTACAAAAGATCTTCTGCTGAGGTaGAGGTGGGAGGAGCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: CLSIRECRPLFSKQATTKDLLLR*RWEELE Trigger: CTCGAGCTCCTCCCACCTCCACCTCAGCAGAAGATC...TTTTGTAGTAGCTTGTTTAGAAAACAATGGCCTGCATTCACGGATGCTGAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR GCA 90 bp | AGTAGGGGCAGGGGAAGGTGTGCTGTTGGAACAAGATTGACATCAGCATACTCCTGTTCTTCGGACATTTaGCTATGGAAGTTCCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: SRGRGRCAVGTRLTSAYSCSSDI*LWKFPK Trigger: CTTTGGGAACTTCCATAGGCAAATGTCCGAAGAACA...GGAGTATGCTGATGTCAATCTTGTTCCAACAGCACACCTTCCCCTGCCCCTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR CCA 90 bp | GCCTCAGCATCCGTGAATGCAGGCCATTGTTTTCTAAACAAGCTACTACAAAACCTTCTCCTGGATGGGTaGCACATTGGCAATGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: ASASVNAGHCFLNKLLQNLLLDG*HIGNGS Trigger: AGAGCCATTGCCAATGTGCCACCCATCCAGGAGAAG...GTTTTGTAGTAGCTTGTTTAGAAAACAATGGCCTGCATTCACGGATGCTGAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR CCA 90 bp | TGCTTGTTTGAGAAAACTGAAAATCAATGGAAACGTACAGCCACCACATGGAGGAGCTTGAGGTTAGGCTaGTTGGCAGCATCCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: CLFEKTENQWKRTATTWRSLRLG*LAASSG Trigger: CCCAGAGGATGCTGCCAACCAGCCTAACCTCAAGCT...CCTCCATGTGGTGGCTGTACGTTTCCATTGATTTTCAGTTTTCTCAAACAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR TCA 90 bp | CACCATCATGATAAACCTGTGTCTATTCCTGGAGAATGGACCTTGAACACTGAGATTCTTCCTCATCTGTaGTCTTCTGCTGAGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HHHDKPVSIPGEWTLNTEILPHL*SSAEVE Trigger: CTCCACCTCAGCAGAAGATCACAGATGAGGAAGAAT...CTCAGTGTTCAAGGTCCATTCTCCAGGAATAGACACAGGTTTATCATGATGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR TCA 90 bp | TGCCTCAGCATCCGTGAATGCAGGCCATTGTTTTCTAAACAAGCTACTACAAAACCAAGCGTGGCTGGCTaGTGGCTAATTCATAGATTG | + |
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Preference number: 4 (lower is better) Translates to: CLSIRECRPLFSKQATTKPSVAG*WLIHRL Trigger: CAATCTATGAATTAGCCATCAGCCAGCCACGCTTGG...TTTTGTAGTAGCTTGTTTAGAAAACAATGGCCTGCATTCACGGATGCTGAGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR CCA 90 bp | AAGACAATAGGAGCAAATGCTAGAAATGCTCGGACTCAAGTAACAAAACTTAGACTGCTGAGGTGGAGGTaGGAGGAGCTCGAGTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: KTIGANARNARTQVTKLRLLRWR*EELEFS Trigger: AGAGAACTCGAGCTCCTCCCACCTCCACCTCAGCAG...TCTAAGTTTTGTTACTTGAGTCCGAGCATTTCTAGCATTTGCTCCTATTGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR CCA 90 bp | TGCTTGTTTGAGAAAACTGAAAATCAATGGAAACGTACAGCCACCACATGGAGGGTGGCACATTGGCAATaGCTCTCTCATAGACTTCCC | + |
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Preference number: 4 (lower is better) Translates to: CLFEKTENQWKRTATTWRVAHWQ*LSHRLP Trigger: GGGAAGTCTATGAGAGAGCCATTGCCAATGTGCCAC...CCTCCATGTGGTGGCTGTACGTTTCCATTGATTTTCAGTTTTCTCAAACAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| 3UTR CAA 72 bp | CATGATAAACCTGTGTCTATTCCTGGAGAATGGACCTaGAACACTGAGTTTAGTCTGCAGTTCGACCCAACG | + |
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Preference number: 4 (lower is better) Translates to: HDKPVSIPGEWT*NTEFSLQFDPT Trigger: CGTTGGGTCGAACTGCAGACTAAACTCAGTGTTCAAGGTCCATTCTCCAGGAATAGACACAGGTTTATCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR GCA 90 bp | AAACATCAGTTGTTAGAATTCACACATTCTGAGGCATGTTGGGAGATACATAGTGGGCACCAGCAACGTTaGCCAACATCTCCTCCATGT | + |
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Preference number: 4 (lower is better) Translates to: KHQLLEFTHSEACWEIHSGHQQR*PTSPPC Trigger: ACATGGAGGAGATGTTGGGCAACGTTGCTGGTGCCC...ACTATGTATCTCCCAACATGCCTCAGAATGTGTGAATTCTAACAACTGATGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR CCA 90 bp | AAGACAATAGGAGCAAATGCTAGAAATGCTCGGACTCAAGTAACAAAACTTAGAGAACTGGTTGACGCGTaGCAGAGTTGTGATGGCACG | + |
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Preference number: 4 (lower is better) Translates to: KTIGANARNARTQVTKLRELVDA*QSCDGT Trigger: CGTGCCATCACAACTCTGCCACGCGTCAACCAGTTC...TCTAAGTTTTGTTACTTGAGTCCGAGCATTTCTAGCATTTGCTCCTATTGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR CCA 90 bp | TGCCTCAGCATCCGTGAATGCAGGCCATTGTTTTCTAAACAAGCTACTACAAAATTCTCTCGGGATCCTTaGCTTCCAGCTCTTCATAGA | + |
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Preference number: 4 (lower is better) Translates to: CLSIRECRPLFSKQATTKFSRDP*LPALHR Trigger: TCTATGAAGAGCTGGAAGCCAAGGATCCCGAGAGAA...TTTTGTAGTAGCTTGTTTAGAAAACAATGGCCTGCATTCACGGATGCTGAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR TCA 90 bp | GCCTCAGCATCCGTGAATGCAGGCCATTGTTTTCTAAACAAGCTACTACAAAACGACGATAACTCAAACTaGGCAAAACTGATCCATACC | + |
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Preference number: 4 (lower is better) Translates to: ASASVNAGHCFLNKLLQNDDNSN*AKLIHT Trigger: GGTATGGATCAGTTTTGCTCAGTTTGAGTTATCGTC...GTTTTGTAGTAGCTTGTTTAGAAAACAATGGCCTGCATTCACGGATGCTGAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR CCA 90 bp | ACAAGATTGACATCAGCATACTCCTTTTCTAATGGAATCATCAAAATGAGGTGCCGGGCATGGTTGACCTaGCGGTTCTTCATCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: TRLTSAYSFSNGIIKMRCRAWLT*RFFISI Trigger: AATGGAGATGAAGAACCGCCAGGTCAACCATGCCCG...GCACCTCATTTTGATGATTCCATTAGAAAAGGAGTATGCTGATGTCAATCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR CCA 90 bp | TGCCTCAGCATCCGTGAATGCAGGCCATTGTTTTCTAAACAAGCTACTACAAAAACTTCTTCTTCATACTaGAACCTCCGTTTGCTCACG | + |
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Preference number: 4 (lower is better) Translates to: CLSIRECRPLFSKQATTKTSSSY*NLRLLT Trigger: CGTGAGCAAACGGAGGTTCCAGTATGAAGAAGAAGT...TTTTGTAGTAGCTTGTTTAGAAAACAATGGCCTGCATTCACGGATGCTGAGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR CCA 90 bp | ACAAGATTGACATCAGCATACTCCTTTTCTAATGGAATCATCAAAATGAGGTGCGTCTCTTCTCCTGGATaGGTGGCACATTGGCAATGG | + |
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Preference number: 4 (lower is better) Translates to: TRLTSAYSFSNGIIKMRCVSSPG*VAHWQW Trigger: CCATTGCCAATGTGCCACCCATCCAGGAGAAGAGAC...GCACCTCATTTTGATGATTCCATTAGAAAAGGAGTATGCTGATGTCAATCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR CCA 90 bp | TGCTTGTTTGAGAAAACTGAAAATCAATGGAAACGTACAGCCACCACATGGAGGGTTGGCAGCATCCTCTaGGAAGATGTAGTCATAGTA | + |
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Preference number: 4 (lower is better) Translates to: CLFEKTENQWKRTATTWRVGSIL*EDVVIV Trigger: TACTATGACTACATCTTCCCAGAGGATGCTGCCAAC...CCTCCATGTGGTGGCTGTACGTTTCCATTGATTTTCAGTTTTCTCAAACAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR TCA 90 bp | AAACATCAGTTGTTAGAATTCACACATTCTGAGGCATGTTGGGAGATACATAGTTCCGTTTGCTCACGATaGTGTCTTCTATACCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: KHQLLEFTHSEACWEIHSSVCSR*CLLYPS Trigger: GGAGGGGTATAGAAGACATCATCGTGAGCAAACGGA...ACTATGTATCTCCCAACATGCCTCAGAATGTGTGAATTCTAACAACTGATGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR GCA 90 bp | TGCTTGTTTGAGAAAACTGAAAATCAATGGAAACGTACAGCCACCACATGGAGGCTTCATCTCCATTTCTaGATATTTCAGCCAGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: CLFEKTENQWKRTATTWRLHLHF*IFQPEG Trigger: ACCCTCTGGCTGAAATATGCAGAAATGGAGATGAAG...CCTCCATGTGGTGGCTGTACGTTTCCATTGATTTTCAGTTTTCTCAAACAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR CCA 90 bp | TGCCTCAGCATCCGTGAATGCAGGCCATTGTTTTCTAAACAAGCTACTACAAAAAAGCACGCTCGTATATaGATCGAGCCCTTTGAATTT | + |
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Preference number: 4 (lower is better) Translates to: CLSIRECRPLFSKQATTKKHARI*IEPFEF Trigger: AAATTCAAAGGGCTCGATCCATATACGAGCGTGCTT...TTTTGTAGTAGCTTGTTTAGAAAACAATGGCCTGCATTCACGGATGCTGAGGCA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR CCA 90 bp | CACCATCATGATAAACCTGTGTCTATTCCTGGAGAATGGACCTTGAACACTGAGTTCCCAAAGCTCTTCTaGCAAATGGCAGATTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: HHHDKPVSIPGEWTLNTEFPKLF*QMADFS Trigger: AGAAAAATCTGCCATTTGCCAGAAGAGCTTTGGGAA...CTCAGTGTTCAAGGTCCATTCTCCAGGAATAGACACAGGTTTATCATGATGGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR TCA 90 bp | TGCTTGTTTGAGAAAACTGAAAATCAATGGAAACGTACAGCCACCACATGGAGGTGCAAACTTAATCCATaGGGTACAATTTTCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: CLFEKTENQWKRTATTWRCKLNP*GTIFRS Trigger: GGACCTGAAAATTGTACCTCATGGATTAAGTTTGCA...CCTCCATGTGGTGGCTGTACGTTTCCATTGATTTTCAGTTTTCTCAAACAAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR GCA 90 bp | TGCTTGTTTGAGAAAACTGAAAATCAATGGAAACGTACAGCCACCACATGGAGGCAGCTCTTCATAGAGTaGATAGTTAACCCAAAGGTA | + |
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Preference number: 4 (lower is better) Translates to: CLFEKTENQWKRTATTWRQLFIE*IVNPKV Trigger: TACCTTTGGGTTAACTATGCACTCTATGAAGAGCTG...CCTCCATGTGGTGGCTGTACGTTTCCATTGATTTTCAGTTTTCTCAAACAAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR TCA 90 bp | AAACATCAGTTGTTAGAATTCACACATTCTGAGGCATGTTGGGAGATACATAGTTTGGGCCTCTTGTTTTaGAATCCTATCCAGGGCATA | + |
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Preference number: 4 (lower is better) Translates to: KHQLLEFTHSEACWEIHSLGLLF*NPIQGI Trigger: TATGCCCTGGATAGGATTTCAAAACAAGAGGCCCAA...ACTATGTATCTCCCAACATGCCTCAGAATGTGTGAATTCTAACAACTGATGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR GCA 90 bp | GCCTCAGCATCCGTGAATGCAGGCCATTGTTTTCTAAACAAGCTACTACAAAACTTTCATAAAGCTTCCTaGATCTGTCAAATTCTCGAA | + |
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Preference number: 4 (lower is better) Translates to: ASASVNAGHCFLNKLLQNFHKAS*ICQILE Trigger: TTCGAGAATTTGACAGATGCAGGAAGCTTTATGAAA...GTTTTGTAGTAGCTTGTTTAGAAAACAATGGCCTGCATTCACGGATGCTGAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR CCA 90 bp | AAGACAATAGGAGCAAATGCTAGAAATGCTCGGACTCAAGTAACAAAACTTAGATCGGACATTTGCCTATaGAAGTTCCCAAAGCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: KTIGANARNARTQVTKLRSDICL*KFPKLF Trigger: GAAGAGCTTTGGGAACTTCCATAGGCAAATGTCCGA...TCTAAGTTTTGTTACTTGAGTCCGAGCATTTCTAGCATTTGCTCCTATTGTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR CCA 90 bp | TGTTTGAGAAAACTGAAAATCAATGGAAACGTACAGCCACCACATGGAGGTGTTCTTCTTGACCTTTTCTaGCATGAGTTTGTCTACTCT | + |
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Preference number: 4 (lower is better) Translates to: CLRKLKINGNVQPPHGGVLLDLF*HEFVYS Trigger: AGAGTAGACAAACTCATGCCAGAAAAGGTCAAGAAG...AACACCTCCATGTGGTGGCTGTACGTTTCCATTGATTTTCAGTTTTCTCAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR TCA 90 bp | TCTAATGGAATCATCAAAATGAGGTGCCACCATACTACTGCTTGTTTGAGAAAAATGGATCGAGCCCTTTaGATTTCCTTTAGACTTTCC | + |
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Preference number: 4 (lower is better) Translates to: SNGIIKMRCHHTTACLRKMDRAL*ISFRLS Trigger: GGAAAGTCTAAAGGAAATTCAAAGGGCTCGATCCAT...TTTTCTCAAACAAGCAGTAGTATGGTGGCACCTCATTTTGATGATTCCATTAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS-3UTR TCA 90 bp | AAGACAATAGGAGCAAATGCTAGAAATGCTCGGACTCAAGTAACAAAACTTAGAAGTTCCAAAGACGCTTaGTATACCTGTCTTGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: KTIGANARNARTQVTKLRSSKDA*YTCLVL Trigger: GAGAACAAGACAGGTATATCAAGCGTCTTTGGAACT...TCTAAGTTTTGTTACTTGAGTCCGAGCATTTCTAGCATTTGCTCCTATTGTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| 3UTR CAA 72 bp | GACTCCTGTTGTTTAATGACAACTGTTAAACATCAGTaGTTAGAATTCACACATTCTGAGGCATGTTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DSCCLMTTVKHQ*LEFTHSEACWE Trigger: CTCCCAACATGCCTCAGAATGTGTGAATTCTAACAACTGATGTTTAACAGTTGTCATTAAACAACAGGAGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS-3UTR GCA 90 bp | AAACATCAGTTGTTAGAATTCACACATTCTGAGGCATGTTGGGAGATACATAGTACTTTCCTCCCATTGTaGGTATTTTATCCAGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KHQLLEFTHSEACWEIHSTFLPL*VFYPVA Trigger: AGCAACTGGATAAAATACGCACAATGGGAGGAAAGT...ACTATGTATCTCCCAACATGCCTCAGAATGTGTGAATTCTAACAACTGATGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS-3UTR GCA 90 bp | TCTAATGGAATCATCAAAATGAGGTGCCACCATACTACTGCTTGTTTGAGAAAATCAAATTCTCGAAGCTaGAGTTCCAGTTCTATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SNGIIKMRCHHTTACLRKSNSRS*SSSSMY Trigger: ATACATAGAACTGGAACTGCAGCTTCGAGAATTTGA...TTTTCTCAAACAAGCAGTAGTATGGTGGCACCTCATTTTGATGATTCCATTAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS-3UTR GCA 90 bp | AAACATCAGTTGTTAGAATTCACACATTCTGAGGCATGTTGGGAGATACATAGTCCTTGTCTGATACTGTaGCAAATTCATCTTCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KHQLLEFTHSEACWEIHSPCLIL*QIHLQN Trigger: GTTTTGAAGATGAATTTGGCACAGTATCAGACAAGG...ACTATGTATCTCCCAACATGCCTCAGAATGTGTGAATTCTAACAACTGATGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS-3UTR CCA 90 bp | AAACATCAGTTGTTAGAATTCACACATTCTGAGGCATGTTGGGAGATACATAGTTGCATCATAATTGTGTaGATTAGCCTTCACTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KHQLLEFTHSEACWEIHSCIIIV*ISLHFF Trigger: GAAGAAGTGAAGGCTAATCCACACAATTATGATGCA...ACTATGTATCTCCCAACATGCCTCAGAATGTGTGAATTCTAACAACTGATGTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS-3UTR CCA 90 bp | AAGACAATAGGAGCAAATGCTAGAAATGCTCGGACTCAAGTAACAAAACTTAGAAGCTCTTCTGGCAAATaGCAGATTTTTCTGTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: KTIGANARNARTQVTKLRSSSGK*QIFLSY Trigger: ATAAGACAGAAAAATCTGCCATTTGCCAGAAGAGCT...TCTAAGTTTTGTTACTTGAGTCCGAGCATTTCTAGCATTTGCTCCTATTGTCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS-3UTR GCA 90 bp | AAGACAATAGGAGCAAATGCTAGAAATGCTCGGACTCAAGTAACAAAACTTAGACTTCTCTTCAAATCTTaGGTACTTGATCCAGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KTIGANARNARTQVTKLRLLFKS*VLDPVF Trigger: AAAAACTGGATCAAGTACGCAAGATTTGAAGAGAAG...TCTAAGTTTTGTTACTTGAGTCCGAGCATTTCTAGCATTTGCTCCTATTGTCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS GCA 90 bp | GGTGGGAGGAGCTCGAGTTCTCTCTCTTTAGCTTCTCGGAGGAGCTaGTCGGCCGTTATCTGCACTTCGGCCGGCGCCTTGTTCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: GGRSSSSLSLASRRS*SAVICTSAGALFFT Trigger: GGTGAAGAACAAGGCGCCGGCCGAAGTGCAGATAACGGCCGAGCAGCTCCTCCGAGAAGCTAAAGAGAGAGAACTCGAGCTCCTCCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS CCA 90 bp | CAGGCCTGCTCCTCAGGCTGCCATTCCATCCAGCGCTCAAACACCTaGCGGGCACCAGCAACGTTGCCCAACATCTCCTCCATGTATGTG | + |
|
Preference number: 5 (lower is better) Translates to: QACSSGCHSIQRSNT*RAPATLPNISSMYV Trigger: CACATACATGGAGGAGATGTTGGGCAACGTTGCTGGTGCCCGCCAGGTGTTTGAGCGCTGGATGGAATGGCAGCCTGAGGAGCAGGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS CCA 90 bp | GGCCATGGCCAGGAGCTTGAGGTTAGGCTGGTTGGCAGCATCCTCTaGGAAGATGTAGTCATAGTATTCTTCCCACCCGGCGTCAGACCC | + |
|
Preference number: 5 (lower is better) Translates to: GHGQELEVRLVGSIL*EDVVIVFFPPGVRP Trigger: GGGTCTGACGCCGGGTGGGAAGAATACTATGACTACATCTTCCCAGAGGATGCTGCCAACCAGCCTAACCTCAAGCTCCTGGCCATGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS GCA 90 bp | AGTTCTCTCTCTTTAGCTTCTCGGAGGAGCTGCTCGGCCGTTATCTaGACTTCGGCCGGCGCCTTGTTCTTCACCTTGGCCACTTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSLSLASRRSCSAVI*TSAGALFFTLATLG Trigger: TCCTAAAGTGGCCAAGGTGAAGAACAAGGCGCCGGCCGAAGTGCAGATAACGGCCGAGCAGCTCCTCCGAGAAGCTAAAGAGAGAGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS CCA 90 bp | AGCGCTTCCAGTGTCTCTTCTCCTGGATGGGTGGCACATTGGCAATaGCTCTCTCATAGACTTCCCGCACAGTGTCAGCTTCCGCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: SASSVSSPGWVAHWQ*LSHRLPAQCQLPHH Trigger: GTGATGCGGAAGCTGACACTGTGCGGGAAGTCTATGAGAGAGCCATTGCCAATGTGCCACCCATCCAGGAGAAGAGACACTGGAAGCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS CCA 90 bp | AGATGTAGCGCTTCCAGTGTCTCTTCTCCTGGATGGGTGGCACATTaGCAATGGCTCTCTCATAGACTTCCCGCACAGTGTCAGCTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: RCSASSVSSPGWVAH*QWLSHRLPAQCQLP Trigger: CGGAAGCTGACACTGTGCGGGAAGTCTATGAGAGAGCCATTGCCAATGTGCCACCCATCCAGGAGAAGAGACACTGGAAGCGCTACATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS CCA 90 bp | CCAAAGGTAGATGTAGCGCTTCCAGTGTCTCTTCTCCTGGATGGGTaGCACATTGGCAATGGCTCTCTCATAGACTTCCCGCACAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PKVDVALPVSLLLDG*HIGNGSLIDFPHSV Trigger: GACACTGTGCGGGAAGTCTATGAGAGAGCCATTGCCAATGTGCCACCCATCCAGGAGAAGAGACACTGGAAGCGCTACATCTACCTTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS-3UTR CAA 90 bp | TGCCTCAGCATCCGTGAATGCAGGCCATTGTTTTCTAAACAAGCTACTACAAAAACTTCGGCCGGCGCCTaGTTCTTCACCTTGGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: CLSIRECRPLFSKQATTKTSAGA*FFTLAT Trigger: AGTGGCCAAGGTGAAGAACAAGGCGCCGGCCGAAGT...TTTTGTAGTAGCTTGTTTAGAAAACAATGGCCTGCATTCACGGATGCTGAGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS-3UTR CAA 90 bp | GCCTCAGCATCCGTGAATGCAGGCCATTGTTTTCTAAACAAGCTACTACAAAACTGTTTCTTCCACAGCTaGGCCATGGCCAGGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ASASVNAGHCFLNKLLQNCFFHS*AMARSL Trigger: CAAGCTCCTGGCCATGGCCAAGCTGTGGAAGAAACA...GTTTTGTAGTAGCTTGTTTAGAAAACAATGGCCTGCATTCACGGATGCTGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS GCA 90 bp | CTGTCTTGTTCTCTCGGGATCCTTGGCTTCCAGCTCTTCATAGAGTaGATAGTTAACCCAAAGGTAGATGTAGCGCTTCCAGTGTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LSCSLGILGFQLFIE*IVNPKVDVALPVSL Trigger: AAGAGACACTGGAAGCGCTACATCTACCTTTGGGTTAACTATGCACTCTATGAAGAGCTGGAAGCCAAGGATCCCGAGAGAACAAGACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS-3UTR CAA 90 bp | TGCCTCAGCATCCGTGAATGCAGGCCATTGTTTTCTAAACAAGCTACTACAAAAGCCCGCTCCACCTCTTaGTATCTCAGCTCGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CLSIRECRPLFSKQATTKARSTS*YLSSKL Trigger: CAACTTCGAGCTGAGATACAAAGAGGTGGAGCGGGC...TTTTGTAGTAGCTTGTTTAGAAAACAATGGCCTGCATTCACGGATGCTGAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS-3UTR CAA 90 bp | AGTAGGGGCAGGGGAAGGTGTGCTGTTGGAACAAGATTGACATCAGCATACTCCTGGCTAATTCATAGATaGCCCGAGCTCTCTCAATAT | + |
|
Preference number: 5 (lower is better) Translates to: SRGRGRCAVGTRLTSAYSWLIHR*PELSQY Trigger: ATATTGAGAGAGCTCGGGCAATCTATGAATTAGCCA...GGAGTATGCTGATGTCAATCTTGTTCCAACAGCACACCTTCCCCTGCCCCTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS TCA 90 bp | GCGCATGAGCAAAGTAAGCATGCTTCTCTTCAAATCTTGCGTACTTaGTCCAGTTTTTCACAGCAGGGTGCACGAGCACAAAGCGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: AHEQSKHASLQILRT*SSFSQQGARAQSVH Trigger: ATGAACGCTTTGTGCTCGTGCACCCTGCTGTGAAAAACTGGATCAAGTACGCAAGATTTGAAGAGAAGCATGCTTACTTTGCTCATGCGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS GCA 90 bp | GACTTTCCGCGCATGAGCAAAGTAAGCATGCTTCTCTTCAAATCTTaGGTACTTGATCCAGTTTTTCACAGCAGGGTGCACGAGCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: DFPRMSKVSMLLFKS*VLDPVFHSRVHEHK Trigger: TTTGTGCTCGTGCACCCTGCTGTGAAAAACTGGATCAAGTACGCAAGATTTGAAGAGAAGCATGCTTACTTTGCTCATGCGCGGAAAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS-3UTR CAA 90 bp | TCTAATGGAATCATCAAAATGAGGTGCCACCATACTACTGCTTGTTTGAGAAAACGGGCACCAGCAACGTaGCCCAACATCTCCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: SNGIIKMRCHHTTACLRKRAPAT*PNISSM Trigger: CATGGAGGAGATGTTGGGCAACGTTGCTGGTGCCCG...TTTTCTCAAACAAGCAGTAGTATGGTGGCACCTCATTTTGATGATTCCATTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS-3UTR CAA 90 bp | TGTTTGAGAAAACTGAAAATCAATGGAAACGTACAGCCACCACATGGAGGTGTTTTGAGGTTAGGCTGGTaGGCAGCATCCTCTGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CLRKLKINGNVQPPHGGVLRLGW*AASSGK Trigger: CTTCCCAGAGGATGCTGCCAACCAGCCTAACCTCAA...AACACCTCCATGTGGTGGCTGTACGTTTCCATTGATTTTCAGTTTTCTCAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS TCA 90 bp | TATATGATTTCCAAAGTACCTCTGGCATATCCAAGCGTGGCTGGCTaGTGGCTAATTCATAGATTGCCCGAGCTCTCTCAATATCACCAA | + |
|
Preference number: 5 (lower is better) Translates to: YMISKVPLAYPSVAG*WLIHRLPELSQYHQ Trigger: TTGGTGATATTGAGAGAGCTCGGGCAATCTATGAATTAGCCATCAGCCAGCCACGCTTGGATATGCCAGAGGTACTTTGGAAATCATATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS-3UTR CAA 90 bp | CACCATCATGATAAACCTGTGTCTATTCCTGGAGAATGGACCTTGAACACTGAGTTGTTCTTCGGACATTaGCCTATGGAAGTTCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: HHHDKPVSIPGEWTLNTELFFGH*PMEVPK Trigger: TTTGGGAACTTCCATAGGCAAATGTCCGAAGAACAA...CTCAGTGTTCAAGGTCCATTCTCCAGGAATAGACACAGGTTTATCATGATGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS-3UTR CAA 90 bp | TGCTTGTTTGAGAAAACTGAAAATCAATGGAAACGTACAGCCACCACATGGAGGTGTTCGCTGAAGCAATaGTCGGTAAAGGTTTCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: CLFEKTENQWKRTATTWRCSLKQ*SVKVSC Trigger: ACACGAAACCTTTACCGACAATTGCTTCAGCGAACA...CCTCCATGTGGTGGCTGTACGTTTCCATTGATTTTCAGTTTTCTCAAACAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS TCA 90 bp | CTTCTTGACCTTTTCTGGCATGAGTTTGTCTACTCTCTCCTTGTCTaGTACTGTGCCAAATTCATCTTCAAAACTTCTCCAGGATTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLDLFWHEFVYSLLV*YCAKFIFKTSPGFQ Trigger: CTGGAATCCTGGAGAAGTTTTGAAGATGAATTTGGCACAGTATCAGACAAGGAGAGAGTAGACAAACTCATGCCAGAAAAGGTCAAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS-3UTR CAA 90 bp | TGCCTCAGCATCCGTGAATGCAGGCCATTGTTTTCTAAACAAGCTACTACAAAATTGTCTACTCTCTCCTaGTCTGATACTGTGCCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: CLSIRECRPLFSKQATTKLSTLS*SDTVPN Trigger: ATTTGGCACAGTATCAGACAAGGAGAGAGTAGACAA...TTTTGTAGTAGCTTGTTTAGAAAACAATGGCCTGCATTCACGGATGCTGAGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS-3UTR CAA 90 bp | CACCATCATGATAAACCTGTGTCTATTCCTGGAGAATGGACCTTGAACACTGAGGCGTATTTTATCCAGTaGCTAATCACAGTCCTATTT | + |
|
Preference number: 5 (lower is better) Translates to: HHHDKPVSIPGEWTLNTEAYFIQ*LITVLF Trigger: AAATAGGACTGTGATTAGCAACTGGATAAAATACGC...CTCAGTGTTCAAGGTCCATTCTCCAGGAATAGACACAGGTTTATCATGATGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS-3UTR CAA 90 bp | CACCATCATGATAAACCTGTGTCTATTCCTGGAGAATGGACCTTGAACACTGAGTATCCTTTGAATAACTaGTTCTTCGGACATTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: HHHDKPVSIPGEWTLNTEYPLNN*FFGHLP Trigger: AGGCAAATGTCCGAAGAACAAGTTATTCAAAGGATA...CTCAGTGTTCAAGGTCCATTCTCCAGGAATAGACACAGGTTTATCATGATGGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS-3UTR CAA 90 bp | TCTAATGGAATCATCAAAATGAGGTGCCACCATACTACTGCTTGTTTGAGAAAATTTTCTGGCATGAGTTaGTCTACTCTCTCCTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SNGIIKMRCHHTTACLRKFSGMS*STLSLS Trigger: AGACAAGGAGAGAGTAGACAAACTCATGCCAGAAAA...TTTTCTCAAACAAGCAGTAGTATGGTGGCACCTCATTTTGATGATTCCATTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS TCA 90 bp | CTCAAAGATGGTATAGTTTTTAAAGAGTTCTTGGGCCTCTTGTTTTaGAATCCTATCCAGGGCATATTTGTAGATAACTCGTACCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LKDGIVFKEFLGLLF*NPIQGIFVDNSYPF Trigger: GAAAGGGTACGAGTTATCTACAAATATGCCCTGGATAGGATTTCAAAACAAGAGGCCCAAGAACTCTTTAAAAACTATACCATCTTTGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS-3UTR CAA 90 bp | TCTAATGGAATCATCAAAATGAGGTGCCACCATACTACTGCTTGTTTGAGAAAACAATATCACCAAGGATaGTCTCTAATTCTGCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: SNGIIKMRCHHTTACLRKQYHQG*SLILQT Trigger: AGTTTGCAGAATTAGAGACAATCCTTGGTGATATTG...TTTTCTCAAACAAGCAGTAGTATGGTGGCACCTCATTTTGATGATTCCATTAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS CAA 90 bp | TGCTCGGCCGTTATCTGCACTTCGGCCGGCGCCTTGTTCTTCACCTaGGCCACTTTAGGAATGCGCTGTTTCCCGGCCGCCGTGGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CSAVICTSAGALFFT*ATLGMRCFPAAVEA Trigger: AGCCTCCACGGCGGCCGGGAAACAGCGCATTCCTAAAGTGGCCAAGGTGAAGAACAAGGCGCCGGCCGAAGTGCAGATAACGGCCGAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS CAA 90 bp | TCTCGGAGGAGCTGCTCGGCCGTTATCTGCACTTCGGCCGGCGCCTaGTTCTTCACCTTGGCCACTTTAGGAATGCGCTGTTTCCCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SRRSCSAVICTSAGA*FFTLATLGMRCFPA Trigger: GGCCGGGAAACAGCGCATTCCTAAAGTGGCCAAGGTGAAGAACAAGGCGCCGGCCGAAGTGCAGATAACGGCCGAGCAGCTCCTCCGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS CCA 72 bp | TCCTCAGGCTGCCATTCCATCCAGCGCTCAAACACCTaGCGGGCACCAGCAACGTTGCCCAACATCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSGCHSIQRSNT*RAPATLPNISS Trigger: GGAGGAGATGTTGGGCAACGTTGCTGGTGCCCGCCAGGTGTTTGAGCGCTGGATGGAATGGCAGCCTGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS GCA 72 bp | AGCTCGAGTTCTCTCTCTTTAGCTTCTCGGAGGAGCTaGTCGGCCGTTATCTGCACTTCGGCCGGCGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSSSLSLASRRS*SAVICTSAGAL Trigger: CAAGGCGCCGGCCGAAGTGCAGATAACGGCCGAGCAGCTCCTCCGAGAAGCTAAAGAGAGAGAACTCGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS CAA 72 bp | GTTATCTGCACTTCGGCCGGCGCCTTGTTCTTCACCTaGGCCACTTTAGGAATGCGCTGTTTCCCGGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: VICTSAGALFFT*ATLGMRCFPAA Trigger: GGCGGCCGGGAAACAGCGCATTCCTAAAGTGGCCAAGGTGAAGAACAAGGCGCCGGCCGAAGTGCAGATAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS GCA 72 bp | CAGCAGGGTGCACGAGCACAAAGCGTTCATAGATGGTaGGGGCCCGCTCCACCTCTTTGTATCTCAGCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: QQGARAQSVHRW*GPAPPLCISAR Trigger: TCGAGCTGAGATACAAAGAGGTGGAGCGGGCCCGCACCATCTATGAACGCTTTGTGCTCGTGCACCCTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS CAA 72 bp | AGCTGCTCGGCCGTTATCTGCACTTCGGCCGGCGCCTaGTTCTTCACCTTGGCCACTTTAGGAATGCGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SCSAVICTSAGA*FFTLATLGMRC Trigger: ACAGCGCATTCCTAAAGTGGCCAAGGTGAAGAACAAGGCGCCGGCCGAAGTGCAGATAACGGCCGAGCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS CCA 72 bp | TCACAGCAGGGTGCACGAGCACAAAGCGTTCATAGATaGTGCGGGCCCGCTCCACCTCTTTGTATCTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SQQGARAQSVHR*CGPAPPLCISA Trigger: AGCTGAGATACAAAGAGGTGGAGCGGGCCCGCACCATCTATGAACGCTTTGTGCTCGTGCACCCTGCTGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS CCA 72 bp | GCTTCCAGTGTCTCTTCTCCTGGATGGGTGGCACATTaGCAATGGCTCTCTCATAGACTTCCCGCACAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: ASSVSSPGWVAH*QWLSHRLPAQC Trigger: ACACTGTGCGGGAAGTCTATGAGAGAGCCATTGCCAATGTGCCACCCATCCAGGAGAAGAGACACTGGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS CCA 72 bp | AGAGTTGTGATGGCACGGTCCCAGATGTTTCGGGCATaGTTGACCTGGCGGTTCTTCATCTCCATTTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RVVMARSQMFRA*LTWRFFISISA Trigger: TGCAGAAATGGAGATGAAGAACCGCCAGGTCAACCATGCCCGAAACATCTGGGACCGTGCCATCACAACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS CCA 72 bp | AGTGTCTCTTCTCCTGGATGGGTGGCACATTGGCAATaGCTCTCTCATAGACTTCCCGCACAGTGTCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SVSSPGWVAHWQ*LSHRLPAQCQL Trigger: AAGCTGACACTGTGCGGGAAGTCTATGAGAGAGCCATTGCCAATGTGCCACCCATCCAGGAGAAGAGACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS CAA 72 bp | ATCCAGCGCTCAAACACCTGGCGGGCACCAGCAACGTaGCCCAACATCTCCTCCATGTATGTGTACTTATAC | + |
|
Preference number: 6 (lower is better) Translates to: IQRSNTWRAPAT*PNISSMYVYLY Trigger: GTATAAGTACACATACATGGAGGAGATGTTGGGCAACGTTGCTGGTGCCCGCCAGGTGTTTGAGCGCTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS CAA 90 bp | CACCCGGCGTCAGACCCATCGTCGGCCTGGACCTTTCTTCTCTTCTaGACCTTTTCTGGCATGAGTTTGTCTACTCTCTCCTTGTCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: HPASDPSSAWTFLLF*TFSGMSLSTLSLSD Trigger: ATCAGACAAGGAGAGAGTAGACAAACTCATGCCAGAAAAGGTCAAGAAGAGAAGAAAGGTCCAGGCCGACGATGGGTCTGACGCCGGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS CCA 72 bp | GGTAGATGTAGCGCTTCCAGTGTCTCTTCTCCTGGATaGGTGGCACATTGGCAATGGCTCTCTCATAGACTT | + |
|
Preference number: 6 (lower is better) Translates to: GRCSASSVSSPG*VAHWQWLSHRL Trigger: AAGTCTATGAGAGAGCCATTGCCAATGTGCCACCCATCCAGGAGAAGAGACACTGGAAGCGCTACATCTACC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS CAA 72 bp | GTTGTGATGGCACGGTCCCAGATGTTTCGGGCATGGTaGACCTGGCGGTTCTTCATCTCCATTTCTGCATAT | + |
|
Preference number: 6 (lower is better) Translates to: VVMARSQMFRAW*TWRFFISISAY Trigger: ATATGCAGAAATGGAGATGAAGAACCGCCAGGTCAACCATGCCCGAAACATCTGGGACCGTGCCATCACAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
||
| CDS TCA 72 bp | TCCAAAGTACCTCTGGCATATCCAAGCGTGGCTGGCTaGTGGCTAATTCATAGATTGCCCGAGCTCTCTCAA | + |
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Preference number: 6 (lower is better) Translates to: SKVPLAYPSVAG*WLIHRLPELSQ Trigger: TTGAGAGAGCTCGGGCAATCTATGAATTAGCCATCAGCCAGCCACGCTTGGATATGCCAGAGGTACTTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS CCA 72 bp | CATGTATGTGTACTTATACCAGAACTGGTTGACGCGTaGCAGAGTTGTGATGGCACGGTCCCAGATGTTTCG | + |
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Preference number: 6 (lower is better) Translates to: HVCVLIPELVDA*QSCDGTVPDVS Trigger: CGAAACATCTGGGACCGTGCCATCACAACTCTGCCACGCGTCAACCAGTTCTGGTATAAGTACACATACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS CAA 90 bp | TTGTGTGGATTAGCCTTCACTTCTTCTTCATACTGGAACCTCCGTTaGCTCACGATGATGTCTTCTATACCCCTCCGGTCACCAAACTTC | + |
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Preference number: 6 (lower is better) Translates to: LCGLAFTSSSYWNLR*LTMMSSIPLRSPNF Trigger: GAAGTTTGGTGACCGGAGGGGTATAGAAGACATCATCGTGAGCAAACGGAGGTTCCAGTATGAAGAAGAAGTGAAGGCTAATCCACACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS TCA 72 bp | CTTCTTCTTCATACTGGAACCTCCGTTTGCTCACGATaGTGTCTTCTATACCCCTCCGGTCACCAAACTTCT | + |
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Preference number: 6 (lower is better) Translates to: LLLHTGTSVCSR*CLLYPSGHQTS Trigger: AGAAGTTTGGTGACCGGAGGGGTATAGAAGACATCATCGTGAGCAAACGGAGGTTCCAGTATGAAGAAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS GCA 72 bp | GGCATGGTTGACCTGGCGGTTCTTCATCTCCATTTCTaGATATTTCAGCCAGAGGGTAATATTTCGGTAGTC | + |
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Preference number: 6 (lower is better) Translates to: GMVDLAVLHLHF*IFQPEGNISVV Trigger: GACTACCGAAATATTACCCTCTGGCTGAAATATGCAGAAATGGAGATGAAGAACCGCCAGGTCAACCATGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS CAA 72 bp | TTAGCCTTCACTTCTTCTTCATACTGGAACCTCCGTTaGCTCACGATGATGTCTTCTATACCCCTCCGGTCA | + |
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Preference number: 6 (lower is better) Translates to: LAFTSSSYWNLR*LTMMSSIPLRS Trigger: TGACCGGAGGGGTATAGAAGACATCATCGTGAGCAAACGGAGGTTCCAGTATGAAGAAGAAGTGAAGGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS CAA 72 bp | GAGGAATTAGTTCCAAAGACGCTTGATATACCTGTCTaGTTCTCTCGGGATCCTTGGCTTCCAGCTCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: EELVPKTLDIPV*FSRDPWLPALH Trigger: ATGAAGAGCTGGAAGCCAAGGATCCCGAGAGAACAAGACAGGTATATCAAGCGTCTTTGGAACTAATTCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS TCA 72 bp | CAAAGTAAGCATGCTTCTCTTCAAATCTTGCGTACTTaGTCCAGTTTTTCACAGCAGGGTGCACGAGCACAA | + |
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Preference number: 6 (lower is better) Translates to: QSKHASLQILRT*SSFSQQGARAQ Trigger: TTGTGCTCGTGCACCCTGCTGTGAAAAACTGGATCAAGTACGCAAGATTTGAAGAGAAGCATGCTTACTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS CAA 90 bp | ACTTTTTGTGAGGAATTAGTTCCAAAGACGCTTGATATACCTGTCTaGTTCTCTCGGGATCCTTGGCTTCCAGCTCTTCATAGAGTGCAT | + |
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Preference number: 6 (lower is better) Translates to: TFCEELVPKTLDIPV*FSRDPWLPALHRVH Trigger: ATGCACTCTATGAAGAGCTGGAAGCCAAGGATCCCGAGAGAACAAGACAGGTATATCAAGCGTCTTTGGAACTAATTCCTCACAAAAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS CAA 72 bp | GATCCATACCTTGACATGCTGTGTTCGCTGAAGCAATaGTCGGTAAAGGTTTCGTGTTCTTTCAGTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: DPYLDMLCSLKQ*SVKVSCSFSFF Trigger: GAAGAAACTGAAAGAACACGAAACCTTTACCGACAATTGCTTCAGCGAACACAGCATGTCAAGGTATGGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS CCA 72 bp | TATTTCGGTAGTCGACATCTAAAGCACGCTCGTATATaGATCGAGCCCTTTGAATTTCCTTTAGACTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: YFGSRHLKHARI*IEPFEFPLDFP Trigger: AGGAAAGTCTAAAGGAAATTCAAAGGGCTCGATCCATATACGAGCGTGCTTTAGATGTCGACTACCGAAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS CAA 90 bp | AATTCTCGAAGCTGCAGTTCCAGTTCTATGTATCCTTTGAATAACTaGTTCTTCGGACATTTGCCTATGGAAGTTCCCAAAGCTCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: NSRSCSSSSMYPLNN*FFGHLPMEVPKALL Trigger: CAGAAGAGCTTTGGGAACTTCCATAGGCAAATGTCCGAAGAACAAGTTATTCAAAGGATACATAGAACTGGAACTGCAGCTTCGAGAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS CAA 90 bp | CTTCTCTTCTTGACCTTTTCTGGCATGAGTTTGTCTACTCTCTCCTaGTCTGATACTGTGCCAAATTCATCTTCAAAACTTCTCCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: LLFLTFSGMSLSTLS*SDTVPNSSSKLLQD Trigger: ATCCTGGAGAAGTTTTGAAGATGAATTTGGCACAGTATCAGACAAGGAGAGAGTAGACAAACTCATGCCAGAAAAGGTCAAGAAGAGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS CCA 72 bp | TCGGACATTTGCCTATGGAAGTTCCCAAAGCTCTTCTaGCAAATGGCAGATTTTTCTGTCTTATTTCAAACT | + |
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Preference number: 6 (lower is better) Translates to: SDICLWKFPKLF*QMADFSVLFQT Trigger: AGTTTGAAATAAGACAGAAAAATCTGCCATTTGCCAGAAGAGCTTTGGGAACTTCCATAGGCAAATGTCCGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS CAA 72 bp | AGCTGCAGTTCCAGTTCTATGTATCCTTTGAATAACTaGTTCTTCGGACATTTGCCTATGGAAGTTCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: SCSSSSMYPLNN*FFGHLPMEVPK Trigger: TTTGGGAACTTCCATAGGCAAATGTCCGAAGAACAAGTTATTCAAAGGATACATAGAACTGGAACTGCAGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS CAA 72 bp | TCTATGTATCCTTTGAATAACTTGTTCTTCGGACATTaGCCTATGGAAGTTCCCAAAGCTCTTCTGGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: SMYPLNNLFFGH*PMEVPKALLAN Trigger: ATTTGCCAGAAGAGCTTTGGGAACTTCCATAGGCAAATGTCCGAAGAACAAGTTATTCAAAGGATACATAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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| CDS CAA 72 bp | TTGACCTTTTCTGGCATGAGTTTGTCTACTCTCTCCTaGTCTGATACTGTGCCAAATTCATCTTCAAAACTT | + |
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Preference number: 6 (lower is better) Translates to: LTFSGMSLSTLS*SDTVPNSSSKL Trigger: AAGTTTTGAAGATGAATTTGGCACAGTATCAGACAAGGAGAGAGTAGACAAACTCATGCCAGAAAAGGTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001818.5 |
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