Pregenerated sensors for CRLF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007888Ensembl transcript IDs: ENSMUST00000008032.14, ENSMUST00000127983.2, ENSMUST00000132648.2
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCAACCCTACCCACACTGGGGTATATCCAAGTGTGACCATCATGTaGACCAAAGCTGTGGTTGTGGGAGCTCATTGTGCCCCAGCCTCT | + |
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Preference number: 1 (lower is better) Translates to: PNPTHTGVYPSVTIM*TKAVVVGAHCAPAS Trigger: AGAGGCTGGGGCACAATGAGCTCCCACAACCACAGCTTTGGTCCACATGATGGTCACACTTGGATATACCCCAGTGTGGGTAGGGTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGTATATCCAAGTGTGACCATCATGTGGACCAAAGCTGTGGTTGTGGGAGCTGTGAGCCTCCAGGTCTaGCCCAGCAGGAGGATGGCC | + |
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Preference number: 2 (lower is better) Translates to: GVYPSVTIMWTKAVVVGAVSLQV*PSRRMA Trigger: GGCCATCCTCCTGCTGGGTCAGACCTGGAGGCTCAC...AGCTCCCACAACCACAGCTTTGGTCCACATGATGGTCACACTTGGATATACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| 3UTR-3UTR TCA 90 bp | TATTTATTTAAAGAGACTCTTGGGAGGCCCTGCAATACCCCAACCCTACCCACAGGGTATATCCAAGTGTaGCCATCATGTGGACCAAAG | + |
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Preference number: 2 (lower is better) Translates to: YLFKETLGRPCNTPTLPTGYIQV*PSCGPK Trigger: CTTTGGTCCACATGATGGTCACACTTGGATATACCC...TGTGGGTAGGGTTGGGGTATTGCAGGGCCTCCCAAGAGTCTCTTTAAATAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| 3UTR TCA 72 bp | ACCCCAACCCTACCCACACTGGGGTATATCCAAGTGTaGCCATCATGTGGACCAAAGCTGTGGTTGTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: TPTLPTLGYIQV*PSCGPKLWLWE Trigger: CTCCCACAACCACAGCTTTGGTCCACATGATGGTCACACTTGGATATACCCCAGTGTGGGTAGGGTTGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| 3UTR-3UTR CAA 90 bp | TTATTTAAAGAGACTCTTGGGAGGCCCTGCAATACCCCAACCCTACCCACACTGGGACCAAAGCTGTGGTaGTGGGAGCTCATTGTGCCC | + |
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Preference number: 3 (lower is better) Translates to: LFKETLGRPCNTPTLPTLGPKLW*WELIVP Trigger: GGGCACAATGAGCTCCCACAACCACAGCTTTGGTCC...CAGTGTGGGTAGGGTTGGGGTATTGCAGGGCCTCCCAAGAGTCTCTTTAAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| 3UTR CCA 72 bp | ACCCACACTGGGGTATATCCAAGTGTGACCATCATGTaGACCAAAGCTGTGGTTGTGGGAGCTCATTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: THTGVYPSVTIM*TKAVVVGAHCA Trigger: GGCACAATGAGCTCCCACAACCACAGCTTTGGTCCACATGATGGTCACACTTGGATATACCCCAGTGTGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| CDS-3UTR TCA 90 bp | GGCTCCAATTCAGGTGAGCCTCCAGGTCTGACCCAGCAGGAGGATGGCCTATCCAGCCGAGGAACTGCTTaGGCTCGCGCCGCACCGGGC | + |
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Preference number: 4 (lower is better) Translates to: GSNSGEPPGLTQQEDGLSSRGTA*ARAAPG Trigger: GCCCGGTGCGGCGCGAGCTCAAGCAGTTCCTCGGCT...GGATAGGCCATCCTCCTGCTGGGTCAGACCTGGAGGCTCACCTGAATTGGAGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| CDS-3UTR GCA 90 bp | TGTGGACCAAAGCTGTGGTTGTGGGAGCTCATTGTGCCCCAGCCTCTGGTAGGTTCGCCGCACCCCGTCTaGCCGAGGGCAGGATCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CGPKLWLWELIVPQPLVGSPHPV*PRAGSP Trigger: AGGGGATCCTGCCCTCGGGCAGACGGGGTGCGGCGA...ACCTACCAGAGGCTGGGGCACAATGAGCTCCCACAACCACAGCTTTGGTCCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS-3UTR CCA 90 bp | CCATCATGTGGACCAAAGCTGTGGTTGTGGGAGCTCATTGTGCCCCAGCCTCTGGGGTGGAGGCAGCGGTaGGGTGGCTCCACTCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PSCGPKLWLWELIVPQPLGWRQR*GGSTRS Trigger: GGAGCGAGTGGAGCCACCCCACCGCTGCCTCCACCC...CAGAGGCTGGGGCACAATGAGCTCCCACAACCACAGCTTTGGTCCACATGATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| CDS-3UTR GCA 90 bp | GTTGCCCAGATGGTACAGAGGGGCTCCAATTCAGGTGAGCCTCCAGGTCTGACCAGCCAGCCGAGGAACTaGTTGAGCTCGCGCCGCACC | + |
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Preference number: 4 (lower is better) Translates to: VAQMVQRGSNSGEPPGLTSQPRN*LSSRRT Trigger: GGTGCGGCGCGAGCTCAAGCAGTTCCTCGGCTGGCT...GGTCAGACCTGGAGGCTCACCTGAATTGGAGCCCCTCTGTACCATCTGGGCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| CDS-3UTR TCA 90 bp | GGAGCTCATTGTGCCCCAGCCTCTGGTAGGTTTCTTTGTTGCCCAGATGGTACAAGCCGAGGAACTGCTTaGGCTCGCGCCGCACCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GAHCAPASGRFLCCPDGTSRGTA*ARAAPG Trigger: GCCCGGTGCGGCGCGAGCTCAAGCAGTTCCTCGGCT...TGTACCATCTGGGCAACAAAGAAACCTACCAGAGGCTGGGGCACAATGAGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| CDS-3UTR CCA 90 bp | CATTGTGCCCCAGCCTCTGGTAGGTTTCTTTGTTGCCCAGATGGTACAGAGGGGGCTCACTTCGAGGGGTaGAGGCAGCGGTGGGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: HCAPASGRFLCCPDGTEGAHFEG*RQRWGG Trigger: GCCACCCCACCGCTGCCTCCACCCCTCGAAGTGAGC...CCCCTCTGTACCATCTGGGCAACAAAGAAACCTACCAGAGGCTGGGGCACAATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| CDS-3UTR TCA 90 bp | CCATCATGTGGACCAAAGCTGTGGTTGTGGGAGCTCATTGTGCCCCAGCCTCTGTGGGGTCCTGGGGGCTaGTTACAGCTGTGTGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: PSCGPKLWLWELIVPQPLWGPGG*LQLCGL Trigger: GAGCCCACACAGCTGTAATCAGCCCCCAGGACCCCA...CAGAGGCTGGGGCACAATGAGCTCCCACAACCACAGCTTTGGTCCACATGATGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS-3UTR TCA 90 bp | ATTGTGCCCCAGCCTCTGGTAGGTTTCTTTGTTGCCCAGATGGTACAGAGGGGCGCAGGCGGCGACCATTaGGGGTCCAGTAGAGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: IVPQPLVGFFVAQMVQRGAGGDH*GSSRAP Trigger: AGGGGCTCTACTGGACCCTCAATGGTCGCCGCCTGC...GCCCCTCTGTACCATCTGGGCAACAAAGAAACCTACCAGAGGCTGGGGCACAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS-3UTR TCA 90 bp | GTGCCCCAGCCTCTGGTAGGTTTCTTTGTTGCCCAGATGGTACAGAGGGGCTCCCTTGAGAGCTGGTGGTaGGACCCAGCGCACACTCAG | + |
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Preference number: 4 (lower is better) Translates to: VPQPLVGFFVAQMVQRGSLESWW*DPAHTQ Trigger: CTGAGTGTGCGCTGGGTCTCACCACCAGCTCTCAAG...GGAGCCCCTCTGTACCATCTGGGCAACAAAGAAACCTACCAGAGGCTGGGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS-3UTR CCA 90 bp | TACCCCAACCCTACCCACACTGGGGTATATCCAAGTGTGACCATCATGTGGACCCACGTGCACGTCGGGTaGGGGGTCCGTGGTCACCAC | + |
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Preference number: 4 (lower is better) Translates to: YPNPTHTGVYPSVTIMWTHVHVG*GVRGHH Trigger: GTGGTGACCACGGACCCCCCACCCGACGTGCACGTG...GGTCCACATGATGGTCACACTTGGATATACCCCAGTGTGGGTAGGGTTGGGGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS-3UTR CCA 90 bp | CCTGCAATACCCCAACCCTACCCACACTGGGGTATATCCAAGTGTGACCATCATGGGTGGAGGCAGCGGTaGGGTGGCTCCACTCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PAIPQPYPHWGISKCDHHGWRQR*GGSTRS Trigger: GGAGCGAGTGGAGCCACCCCACCGCTGCCTCCACCC...ATGATGGTCACACTTGGATATACCCCAGTGTGGGTAGGGTTGGGGTATTGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| CDS-3UTR CCA 90 bp | TTCTTTGTTGCCCAGATGGTACAGAGGGGCTCCAATTCAGGTGAGCCTCCAGGTGCTCACTTCGAGGGGTaGAGGCAGCGGTGGGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: FFVAQMVQRGSNSGEPPGAHFEG*RQRWGG Trigger: GCCACCCCACCGCTGCCTCCACCCCTCGAAGTGAGC...ACCTGGAGGCTCACCTGAATTGGAGCCCCTCTGTACCATCTGGGCAACAAAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| CDS-3UTR TCA 90 bp | GGCTCCAATTCAGGTGAGCCTCCAGGTCTGACCCAGCAGGAGGATGGCCTATCCGGAAGAGGAAATCCTTaGGAGCTGGTGGTGAGACCC | + |
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Preference number: 4 (lower is better) Translates to: GSNSGEPPGLTQQEDGLSGRGNP*ELVVRP Trigger: GGGTCTCACCACCAGCTCTCAAGGATTTCCTCTTCC...GGATAGGCCATCCTCCTGCTGGGTCAGACCTGGAGGCTCACCTGAATTGGAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS-3UTR GCA 90 bp | GACCATCATGTGGACCAAAGCTGTGGTTGTGGGAGCTCATTGTGCCCCAGCCTCAGGAGCCAGCCAGAATaGTGCCATCTCGGGCGTGAC | + |
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Preference number: 4 (lower is better) Translates to: DHHVDQSCGCGSSLCPSLRSQPE*CHLGRD Trigger: GTCACGCCCGAGATGGCAGCATTCTGGCTGGCTCCT...GAGGCTGGGGCACAATGAGCTCCCACAACCACAGCTTTGGTCCACATGATGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS-3UTR TCA 90 bp | TGTGCCCCAGCCTCTGGTAGGTTTCTTTGTTGCCCAGATGGTACAGAGGGGCTCGGGATATGGCATGAGTaGGGGCCCACAGTGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: CAPASGRFLCCPDGTEGLGIWHE*GPTVWY Trigger: GTACCACACTGTGGGCCCTCACTCATGCCATATCCC...GAGCCCCTCTGTACCATCTGGGCAACAAAGAAACCTACCAGAGGCTGGGGCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS-3UTR TCA 90 bp | GTGACCATCATGTGGACCAAAGCTGTGGTTGTGGGAGCTCATTGTGCCCCAGCCAGGAGGTCTGGTTGCTaGCGTCATCCACCACCTTCC | + |
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Preference number: 4 (lower is better) Translates to: VTIMWTKAVVVGAHCAPARRSGC*RHPPPS Trigger: GGAAGGTGGTGGATGACGTCAGCAACCAGACCTCCT...GGCTGGGGCACAATGAGCTCCCACAACCACAGCTTTGGTCCACATGATGGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS-3UTR GCA 90 bp | CCCAACCCTACCCACACTGGGGTATATCCAAGTGTGACCATCATGTGGACCAAAAGCCAGCCGAGGAACTaGTTGAGCTCGCGCCGCACC | + |
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Preference number: 4 (lower is better) Translates to: PNPTHTGVYPSVTIMWTKSQPRN*LSSRRT Trigger: GGTGCGGCGCGAGCTCAAGCAGTTCCTCGGCTGGCT...TTTGGTCCACATGATGGTCACACTTGGATATACCCCAGTGTGGGTAGGGTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| CDS-3UTR GCA 90 bp | GTGCCCCAGCCTCTGGTAGGTTTCTTTGTTGCCCAGATGGTACAGAGGGGCTCCTTCGAGCAGTATGCGTaGTTCTTGAGCCAGCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: VPQPLVGFFVAQMVQRGSFEQYA*FLSQPR Trigger: CCTCGGCTGGCTCAAGAAGCACGCATACTGCTCGAA...GGAGCCCCTCTGTACCATCTGGGCAACAAAGAAACCTACCAGAGGCTGGGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| CDS-3UTR CCA 90 bp | AAGCTGTGGTTGTGGGAGCTCATTGTGCCCCAGCCTCTGGTAGGTTTCTTTGTTCAGCGCACACTCAGCTaGTCCTCCAGGCCCCCAACG | + |
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Preference number: 4 (lower is better) Translates to: KLWLWELIVPQPLVGFFVQRTLS*SSRPPT Trigger: CGTTGGGGGCCTGGAGGACCAGCTGAGTGTGCGCTG...AACAAAGAAACCTACCAGAGGCTGGGGCACAATGAGCTCCCACAACCACAGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS-3UTR GCA 90 bp | CCATCATGTGGACCAAAGCTGTGGTTGTGGGAGCTCATTGTGCCCCAGCCTCTGTTCGAGCAGTATGCGTaGTTCTTGAGCCAGCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: PSCGPKLWLWELIVPQPLFEQYA*FLSQPR Trigger: CCTCGGCTGGCTCAAGAAGCACGCATACTGCTCGAA...CAGAGGCTGGGGCACAATGAGCTCCCACAACCACAGCTTTGGTCCACATGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| CDS-3UTR TCA 90 bp | ATGTGGACCAAAGCTGTGGTTGTGGGAGCTCATTGTGCCCCAGCCTCTGGTAGGGTTTCGGGTCTTGTGTaGCTTCTGCATCCAAGCACG | + |
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Preference number: 4 (lower is better) Translates to: MWTKAVVVGAHCAPASGRVSGLV*LLHPST Trigger: CGTGCTTGGATGCAGAAGTCACACAAGACCCGAAAC...CCTACCAGAGGCTGGGGCACAATGAGCTCCCACAACCACAGCTTTGGTCCACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| CDS-3UTR GCA 90 bp | TGGGAGGCCCTGCAATACCCCAACCCTACCCACACTGGGGTATATCCAAGTGTGATAGAGCAGGTAGCTTaGAGGGAGGAGCCGATGAGA | + |
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Preference number: 4 (lower is better) Translates to: WEALQYPNPTHTGVYPSVIEQVA*REEPMR Trigger: TCTCATCGGCTCCTCCCTGCAAGCTACCTGCTCTAT...CACACTTGGATATACCCCAGTGTGGGTAGGGTTGGGGTATTGCAGGGCCTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS-3UTR TCA 90 bp | AGTGTGACCATCATGTGGACCAAAGCTGTGGTTGTGGGAGCTCATTGTGCCCCAAGATCTCATAGGGAGTaGAGAGGGCCAGGTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SVTIMWTKAVVVGAHCAPRSHRE*RGPGPW Trigger: CCAAGGACCTGGCCCTCTTCACTCCCTATGAGATCT...TGGGGCACAATGAGCTCCCACAACCACAGCTTTGGTCCACATGATGGTCACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS-3UTR TCA 90 bp | ACCATCATGTGGACCAAAGCTGTGGTTGTGGGAGCTCATTGTGCCCCAGCCTCTCCAGGACATCCAGTGTaGGGACATCAGATCTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: TIMWTKAVVVGAHCAPASPGHPV*GHQILL Trigger: CAGCAAGATCTGATGTCCTCACACTGGATGTCCTGG...AGAGGCTGGGGCACAATGAGCTCCCACAACCACAGCTTTGGTCCACATGATGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS-3UTR TCA 90 bp | TTCTTTGTTGCCCAGATGGTACAGAGGGGCTCCAATTCAGGTGAGCCTCCAGGTAGTATGCGTGCTTCTTaGGCCAGCCGAGGAACTGCT | + |
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Preference number: 4 (lower is better) Translates to: FFVAQMVQRGSNSGEPPGSMRAS*ASRGTA Trigger: AGCAGTTCCTCGGCTGGCTCAAGAAGCACGCATACT...ACCTGGAGGCTCACCTGAATTGGAGCCCCTCTGTACCATCTGGGCAACAAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| CDS-3UTR CCA 90 bp | GGGGTATATCCAAGTGTGACCATCATGTGGACCAAAGCTGTGGTTGTGGGAGCTAGAAGGGTGGGGTCCTaGGGGCTGATTACAGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: GVYPSVTIMWTKAVVVGARRVGS*GLITAV Trigger: CACAGCTGTAATCAGCCCCCAGGACCCCACCCTTCT...AGCTCCCACAACCACAGCTTTGGTCCACATGATGGTCACACTTGGATATACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS-3UTR CCA 90 bp | GTATATCCAAGTGTGACCATCATGTGGACCAAAGCTGTGGTTGTGGGAGCTCATAGAGCCCCTCAGCGGTaGCCCCAGGTGTGTCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: VYPSVTIMWTKAVVVGAHRAPQR*PQVCLH Trigger: ATGGAGACACACCTGGGGCCACCGCTGAGGGGCTCT...ATGAGCTCCCACAACCACAGCTTTGGTCCACATGATGGTCACACTTGGATATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS-3UTR CCA 90 bp | GGTTTCTTTGTTGCCCAGATGGTACAGAGGGGCTCCAATTCAGGTGAGCCTCCAAGAGGGCCAGGTCCTTaGGGATATGGCATGAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: GFFVAQMVQRGSNSGEPPRGPGP*GYGMSE Trigger: CTCACTCATGCCATATCCCCAAGGACCTGGCCCTCT...TGGAGGCTCACCTGAATTGGAGCCCCTCTGTACCATCTGGGCAACAAAGAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS-3UTR TCA 90 bp | AAGCTGTGGTTGTGGGAGCTCATTGTGCCCCAGCCTCTGGTAGGTTTCTTTGTTCACCAGATTGTCTCCTaGCTGCTGCCTGGACCCATT | + |
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Preference number: 4 (lower is better) Translates to: KLWLWELIVPQPLVGFFVHQIVS*LLPGPI Trigger: AATGGGTCCAGGCAGCAGTCAGGAGACAATCTGGTG...AACAAAGAAACCTACCAGAGGCTGGGGCACAATGAGCTCCCACAACCACAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS-3UTR TCA 90 bp | AAAGCTGTGGTTGTGGGAGCTCATTGTGCCCCAGCCTCTGGTAGGTTTCTTTGTAGTATGCGTGCTTCTTaGGCCAGCCGAGGAACTGCT | + |
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Preference number: 4 (lower is better) Translates to: KAVVVGAHCAPASGRFLCSMRAS*ASRGTA Trigger: AGCAGTTCCTCGGCTGGCTCAAGAAGCACGCATACT...ACAAAGAAACCTACCAGAGGCTGGGGCACAATGAGCTCCCACAACCACAGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| CDS-3UTR TCA 90 bp | ACCAAAGCTGTGGTTGTGGGAGCTCATTGTGCCCCAGCCTCTGGTAGGTTTCTTGTTTCGGGTCTTGTGTaGCTTCTGCATCCAAGCACG | + |
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Preference number: 4 (lower is better) Translates to: TKAVVVGAHCAPASGRFLVSGLV*LLHPST Trigger: CGTGCTTGGATGCAGAAGTCACACAAGACCCGAAAC...AAGAAACCTACCAGAGGCTGGGGCACAATGAGCTCCCACAACCACAGCTTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| CDS-3UTR GCA 90 bp | GTGACCATCATGTGGACCAAAGCTGTGGTTGTGGGAGCTCATTGTGCCCCAGCCTTGTCTCCTGACTGCTaGCTGGACCCATTAAGGTTA | + |
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Preference number: 4 (lower is better) Translates to: VTIMWTKAVVVGAHCAPALSPDC*LDPLRL Trigger: TAACCTTAATGGGTCCAGGCAGCAGTCAGGAGACAA...GGCTGGGGCACAATGAGCTCCCACAACCACAGCTTTGGTCCACATGATGGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS-3UTR GCA 90 bp | TTGTGGGAGCTCATTGTGCCCCAGCCTCTGGTAGGTTTCTTTGTTGCCCAGATGAAGGTTCGAGCAGTATaGGTGCTTCTTGAGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LWELIVPQPLVGFFVAQMKVRAV*VLLEPA Trigger: GGCTGGCTCAAGAAGCACGCATACTGCTCGAACCTT...CATCTGGGCAACAAAGAAACCTACCAGAGGCTGGGGCACAATGAGCTCCCACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| CDS-3UTR GCA 90 bp | CTCATTGTGCCCCAGCCTCTGGTAGGTTTCTTTGTTGCCCAGATGGTACAGAGGAAGGTTCGAGCAGTATaGGTGCTTCTTGAGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LIVPQPLVGFFVAQMVQRKVRAV*VLLEPA Trigger: GGCTGGCTCAAGAAGCACGCATACTGCTCGAACCTT...CCTCTGTACCATCTGGGCAACAAAGAAACCTACCAGAGGCTGGGGCACAATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| CDS-3UTR CCA 90 bp | AAAGCTGTGGTTGTGGGAGCTCATTGTGCCCCAGCCTCTGGTAGGTTTCTTTGTCTGAGCCTAGGCGATTaGTGGCTTCCACCCAGATCT | + |
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Preference number: 4 (lower is better) Translates to: KAVVVGAHCAPASGRFLCLSLGD*WLPPRS Trigger: AGATCTGGGTGGAAGCCACCAATCGCCTAGGCTCAG...ACAAAGAAACCTACCAGAGGCTGGGGCACAATGAGCTCCCACAACCACAGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS-3UTR CCA 90 bp | TTCTTTGTTGCCCAGATGGTACAGAGGGGCTCCAATTCAGGTGAGCCTCCAGGTAGCGGATCTGGTACTTaGCTTGGAAGAGGAAATCCT | + |
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Preference number: 4 (lower is better) Translates to: FFVAQMVQRGSNSGEPPGSGSGT*LGRGNP Trigger: AGGATTTCCTCTTCCAAGCCAAGTACCAGATCCGCT...ACCTGGAGGCTCACCTGAATTGGAGCCCCTCTGTACCATCTGGGCAACAAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS-3UTR CCA 90 bp | GTATATCCAAGTGTGACCATCATGTGGACCAAAGCTGTGGTTGTGGGAGCTCATAGCCTAGGCGATTGGTaGCTTCCACCCAGATCTCAT | + |
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Preference number: 4 (lower is better) Translates to: VYPSVTIMWTKAVVVGAHSLGDW*LPPRSH Trigger: ATGAGATCTGGGTGGAAGCCACCAATCGCCTAGGCT...ATGAGCTCCCACAACCACAGCTTTGGTCCACATGATGGTCACACTTGGATATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS-3UTR TCA 90 bp | GCAATACCCCAACCCTACCCACACTGGGGTATATCCAAGTGTGACCATCATGTGACCTCAGCTTGTACTTaGGGGAGTAGTTGGTATGTA | + |
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Preference number: 4 (lower is better) Translates to: AIPQPYPHWGISKCDHHVTSACT*GSSWYV Trigger: TACATACCAACTACTCCCTCAAGTACAAGCTGAGGT...CACATGATGGTCACACTTGGATATACCCCAGTGTGGGTAGGGTTGGGGTATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS-3UTR TCA 90 bp | TATTTATTTAAAGAGACTCTTGGGAGGCCCTGCAATACCCCAACCCTACCCACATCACATGTGTTATCCTaGCCGTACCACCTCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: YLFKETLGRPCNTPTLPTSHVLS*PYHLSL Trigger: CAAGCTGAGGTGGTACGGTCAGGATAACACATGTGA...TGTGGGTAGGGTTGGGGTATTGCAGGGCCTCCCAAGAGTCTCTTTAAATAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS CCA 90 bp | CGCCGCCCGGGCCCGGGCGCTCACTTCGAGGGGTGGAGGCAGCGGTaGGGTGGCTCCACTCGCTCCAGATTCCCGCCTTTTTCGACCCAT | + |
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Preference number: 5 (lower is better) Translates to: RRPGPGAHFEGWRQR*GGSTRSRFPPFSTH Trigger: ATGGGTCGAAAAAGGCGGGAATCTGGAGCGAGTGGAGCCACCCCACCGCTGCCTCCACCCCTCGAAGTGAGCGCCCGGGCCCGGGCGGCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| CDS CCA 90 bp | CAGCTGGTCCTCCAGGCCCCCAACGCGGCTCACGTGCACGTCGGGTaGGGGGTCCGTGGTCACCACGTCCAGGACATCCAGTGTGAGGAC | + |
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Preference number: 5 (lower is better) Translates to: QLVLQAPNAAHVHVG*GVRGHHVQDIQCED Trigger: GTCCTCACACTGGATGTCCTGGACGTGGTGACCACGGACCCCCCACCCGACGTGCACGTGAGCCGCGTTGGGGGCCTGGAGGACCAGCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS CCA 90 bp | AGGAAATCCTTGAGAGCTGGTGGTGAGACCCAGCGCACACTCAGCTaGTCCTCCAGGCCCCCAACGCGGCTCACGTGCACGTCGGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: RKSLRAGGETQRTLS*SSRPPTRLTCTSGG Trigger: CCCACCCGACGTGCACGTGAGCCGCGTTGGGGGCCTGGAGGACCAGCTGAGTGTGCGCTGGGTCTCACCACCAGCTCTCAAGGATTTCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS-3UTR CAA 90 bp | GTGACCATCATGTGGACCAAAGCTGTGGTTGTGGGAGCTCATTGTGCCCCAGCCCAGCCGAGGAACTGCTaGAGCTCGCGCCGCACCGGG | + |
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Preference number: 5 (lower is better) Translates to: VTIMWTKAVVVGAHCAPAQPRNC*SSRRTG Trigger: CCCGGTGCGGCGCGAGCTCAAGCAGTTCCTCGGCTG...GGCTGGGGCACAATGAGCTCCCACAACCACAGCTTTGGTCCACATGATGGTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| CDS-3UTR CAA 90 bp | TGTGACCATCATGTGGACCAAAGCTGTGGTTGTGGGAGCTCATTGTGCCCCAGCCAGCCGAGGAACTGCTaGAGCTCGCGCCGCACCGGG | + |
|
Preference number: 5 (lower is better) Translates to: CDHHVDQSCGCGSSLCPSQPRNC*SSRRTG Trigger: CCCGGTGCGGCGCGAGCTCAAGCAGTTCCTCGGCTG...GCTGGGGCACAATGAGCTCCCACAACCACAGCTTTGGTCCACATGATGGTCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| CDS TCA 90 bp | AGCCAGAATGCTGCCATCTCGGGCGTGACACACCAGATTGTCTCCTaGCTGCTGCCTGGACCCATTAAGGTTAGCCAGGGCCAGGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SQNAAISGVTHQIVS*LLPGPIKVSQGQGQ Trigger: CTGGCCCTGGCCCTGGCTAACCTTAATGGGTCCAGGCAGCAGTCAGGAGACAATCTGGTGTGTCACGCCCGAGATGGCAGCATTCTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS GCA 90 bp | AGCACGCCACTGGTCGTACAGGCGGAAACTAAGGTTCGAGCAGTATaGGTGCTTCTTGAGCCAGCCGAGGAACTGCTTGAGCTCGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: STPLVVQAETKVRAV*VLLEPAEELLELAP Trigger: CGGCGCGAGCTCAAGCAGTTCCTCGGCTGGCTCAAGAAGCACGCATACTGCTCGAACCTTAGTTTCCGCCTGTACGACCAGTGGCGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| CDS TCA 90 bp | CTGAGCCTAGGCGATTGGTGGCTTCCACCCAGATCTCATAGGGAGTaGAGAGGGCCAGGTCCTTGGGGATATGGCATGAGTGAGGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSLGDWWLPPRSHRE*RGPGPWGYGMSEGP Trigger: TGGGCCCTCACTCATGCCATATCCCCAAGGACCTGGCCCTCTTCACTCCCTATGAGATCTGGGTGGAAGCCACCAATCGCCTAGGCTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000132648.2 |
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| CDS TCA 90 bp | CCACGCGGTAGCGGATCTGGTACTTGGCTTGGAAGAGGAAATCCTTaGGAGCTGGTGGTGAGACCCAGCGCACACTCAGCTGGTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PRGSGSGTWLGRGNP*ELVVRPSAHSAGPP Trigger: TGGAGGACCAGCTGAGTGTGCGCTGGGTCTCACCACCAGCTCTCAAGGATTTCCTCTTCCAAGCCAAGTACCAGATCCGCTACCGCGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS GCA 90 bp | GCTTCTCAGGGGGCAAGCCAACATAGAGGCAGGAGCCAGCCAGAATaGTGCCATCTCGGGCGTGACACACCAGATTGTCTCCTGACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ASQGASQHRGRSQPE*CHLGRDTPDCLLTA Trigger: AGCAGTCAGGAGACAATCTGGTGTGTCACGCCCGAGATGGCAGCATTCTGGCTGGCTCCTGCCTCTATGTTGGCTTGCCCCCTGAGAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS GCA 90 bp | GAGGGCAGGATCCCCTCGTCCTGGTTTCGGGTCTTGTGTGACTTCTaGATCCAAGCACGCCACTGGTCGTACAGGCGGAAACTAAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: EGRIPSSWFRVLCDF*IQARHWSYRRKLRF Trigger: GAACCTTAGTTTCCGCCTGTACGACCAGTGGCGTGCTTGGATGCAGAAGTCACACAAGACCCGAAACCAGGACGAGGGGATCCTGCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS CCA 90 bp | CCACTCGCTCCAGATTCCCGCCTTTTTCGACCCATAGATCCCGAATaGGTTACAACGCACTTGGACGAAGTAAACGGTGCCGGGCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PLAPDSRLFRPIDPE*VTTHLDEVNGAGLQ Trigger: CTGAAGCCCGGCACCGTTTACTTCGTCCAAGTGCGTTGTAACCCATTCGGGATCTATGGGTCGAAAAAGGCGGGAATCTGGAGCGAGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| CDS CCA 90 bp | TCCTGGTTTCGGGTCTTGTGTGACTTCTGCATCCAAGCACGCCACTaGTCGTACAGGCGGAAACTAAGGTTCGAGCAGTATGCGTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SWFRVLCDFCIQARH*SYRRKLRFEQYACF Trigger: GAAGCACGCATACTGCTCGAACCTTAGTTTCCGCCTGTACGACCAGTGGCGTGCTTGGATGCAGAAGTCACACAAGACCCGAAACCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS CCA 90 bp | ACCTGGTTTCGGGTCTTGTGTGACTTCTGCATCCAAGCACGCCACTaGTCGTACAGGCGGAAACTAAGGTTCGAGCAGTATGCGTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TWFRVLCDFCIQARH*SYRRKLRFEQYACF Trigger: GAAGCACGCATACTGCTCGAACCTTAGTTTCCGCCTGTACGACCAGTGGCGTGCTTGGATGCAGAAGTCACACAAGACCCGAAACCAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127983.2 |
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| CDS-3UTR CAA 90 bp | ATCATGTGGACCAAAGCTGTGGTTGTGGGAGCTCATTGTGCCCCAGCCTCTGGTGATCTGGTACTTGGCTaGGAAGAGGAAATCCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: IMWTKAVVVGAHCAPASGDLVLG*EEEILE Trigger: CTCAAGGATTTCCTCTTCCAAGCCAAGTACCAGATC...ACCAGAGGCTGGGGCACAATGAGCTCCCACAACCACAGCTTTGGTCCACATGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS-3UTR CAA 90 bp | GTATATCCAAGTGTGACCATCATGTGGACCAAAGCTGTGGTTGTGGGAGCTCATTATAGAGCAGGTAGCTaGCAGGGAGGAGCCGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: VYPSVTIMWTKAVVVGAHYRAGS*QGGADE Trigger: CTCATCGGCTCCTCCCTGCAAGCTACCTGCTCTATA...ATGAGCTCCCACAACCACAGCTTTGGTCCACATGATGGTCACACTTGGATATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS CCA 72 bp | CTCCAGGCCCCCAACGCGGCTCACGTGCACGTCGGGTaGGGGGTCCGTGGTCACCACGTCCAGGACATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LQAPNAAHVHVG*GVRGHHVQDIQ Trigger: CTGGATGTCCTGGACGTGGTGACCACGGACCCCCCACCCGACGTGCACGTGAGCCGCGTTGGGGGCCTGGAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS GCA 72 bp | GAGCAGTATGCGTGCTTCTTGAGCCAGCCGAGGAACTaGTTGAGCTCGCGCCGCACCGGGCCCGAGCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: EQYACFLSQPRN*LSSRRTGPELG Trigger: GCCCAGCTCGGGCCCGGTGCGGCGCGAGCTCAAGCAGTTCCTCGGCTGGCTCAAGAAGCACGCATACTGCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| CDS CAA 72 bp | CAGTATGCGTGCTTCTTGAGCCAGCCGAGGAACTGCTaGAGCTCGCGCCGCACCGGGCCCGAGCTGGGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: QYACFLSQPRNC*SSRRTGPELGS Trigger: CGAGCCCAGCTCGGGCCCGGTGCGGCGCGAGCTCAAGCAGTTCCTCGGCTGGCTCAAGAAGCACGCATACTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| CDS CCA 72 bp | TTGAGAGCTGGTGGTGAGACCCAGCGCACACTCAGCTaGTCCTCCAGGCCCCCAACGCGGCTCACGTGCACG | + |
|
Preference number: 6 (lower is better) Translates to: LRAGGETQRTLS*SSRPPTRLTCT Trigger: CGTGCACGTGAGCCGCGTTGGGGGCCTGGAGGACCAGCTGAGTGTGCGCTGGGTCTCACCACCAGCTCTCAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS TCA 72 bp | GCTTCAGGCCCGCGAGACGGCAGGAGGTCTGGTTGCTaGCGTCATCCACCACCTTCCAGTCCACGCTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: ASGPRDGRRSGC*RHPPPSSPRCP Trigger: AGGACAGCGTGGACTGGAAGGTGGTGGATGACGTCAGCAACCAGACCTCCTGCCGTCTCGCGGGCCTGAAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS TCA 72 bp | AGGCAGGAGCCAGCCAGAATGCTGCCATCTCGGGCGTaGCACACCAGATTGTCTCCTGACTGCTGCCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: RQEPARMLPSRA*HTRLSPDCCLD Trigger: GTCCAGGCAGCAGTCAGGAGACAATCTGGTGTGTCACGCCCGAGATGGCAGCATTCTGGCTGGCTCCTGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS GCA 72 bp | GCCCCAGGTGTGTCTCCATGTATAGAGCAGGTAGCTTaGAGGGAGGAGCCGATGAGAAGGGTGGGGTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: APGVSPCIEQVA*REEPMRRVGSW Trigger: CCAGGACCCCACCCTTCTCATCGGCTCCTCCCTGCAAGCTACCTGCTCTATACATGGAGACACACCTGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS TCA 72 bp | GCTGCCATCTCGGGCGTGACACACCAGATTGTCTCCTaGCTGCTGCCTGGACCCATTAAGGTTAGCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: AAISGVTHQIVS*LLPGPIKVSQG Trigger: GCCCTGGCTAACCTTAATGGGTCCAGGCAGCAGTCAGGAGACAATCTGGTGTGTCACGCCCGAGATGGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS TCA 72 bp | GGGCAGGATCCCCTCGTCCTGGTTTCGGGTCTTGTGTaGCTTCTGCATCCAAGCACGCCACTGGTCGTACAG | + |
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Preference number: 6 (lower is better) Translates to: GQDPLVLVSGLV*LLHPSTPLVVQ Trigger: CTGTACGACCAGTGGCGTGCTTGGATGCAGAAGTCACACAAGACCCGAAACCAGGACGAGGGGATCCTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS GCA 72 bp | GGGGCAAGCCAACATAGAGGCAGGAGCCAGCCAGAATaGTGCCATCTCGGGCGTGACACACCAGATTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: GASQHRGRSQPE*CHLGRDTPDCL Trigger: GAGACAATCTGGTGTGTCACGCCCGAGATGGCAGCATTCTGGCTGGCTCCTGCCTCTATGTTGGCTTGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS GCA 72 bp | GCCGGCAGGACCTGGTTTCGGGTCTTGTGTGACTTCTaGATCCAAGCACGCCACTGGTCGTACAGGCGGAAA | + |
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Preference number: 6 (lower is better) Translates to: AGRTWFRVLCDF*IQARHWSYRRK Trigger: TTTCCGCCTGTACGACCAGTGGCGTGCTTGGATGCAGAAGTCACACAAGACCCGAAACCAGGTCCTGCCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127983.2 |
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| CDS CAA 72 bp | AGGCGGAAACTAAGGTTCGAGCAGTATGCGTGCTTCTaGAGCCAGCCGAGGAACTGCTTGAGCTCGCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RRKLRFEQYACF*SQPRNCLSSRR Trigger: GCGGCGCGAGCTCAAGCAGTTCCTCGGCTGGCTCAAGAAGCACGCATACTGCTCGAACCTTAGTTTCCGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| CDS CAA 90 bp | TCCCGCCTTTTTCGACCCATAGATCCCGAATGGGTTACAACGCACTaGGACGAAGTAAACGGTGCCGGGCTTCAGGCCCGCGAGACGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SRLFRPIDPEWVTTH*DEVNGAGLQARETA Trigger: TGCCGTCTCGCGGGCCTGAAGCCCGGCACCGTTTACTTCGTCCAAGTGCGTTGTAACCCATTCGGGATCTATGGGTCGAAAAAGGCGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| CDS TCA 72 bp | GGGAGTGAAGAGGGCCAGGTCCTTGGGGATATGGCATaGGTGAGGGCCCACAGTGTGGTACTCCTCACATGT | + |
|
Preference number: 6 (lower is better) Translates to: GSEEGQVLGDMA*VRAHSVVLLTC Trigger: ACATGTGAGGAGTACCACACTGTGGGCCCTCACTCATGCCATATCCCCAAGGACCTGGCCCTCTTCACTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000132648.2 |
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| CDS TCA 72 bp | GAGTTTAGCCGGCAGGACCTGGTTTCGGGTCTTGTGTaGCTTCTGCATCCAAGCACGCCACTGGTCGTACAG | + |
|
Preference number: 6 (lower is better) Translates to: EFSRQDLVSGLV*LLHPSTPLVVQ Trigger: CTGTACGACCAGTGGCGTGCTTGGATGCAGAAGTCACACAAGACCCGAAACCAGGTCCTGCCGGCTAAACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127983.2 |
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| CDS GCA 72 bp | ATCCCCTCGTCCTGGTTTCGGGTCTTGTGTGACTTCTaGATCCAAGCACGCCACTGGTCGTACAGGCGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: IPSSWFRVLCDF*IQARHWSYRRK Trigger: TTTCCGCCTGTACGACCAGTGGCGTGCTTGGATGCAGAAGTCACACAAGACCCGAAACCAGGACGAGGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008032.14 |
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| CDS CAA 72 bp | TTTCGACCCATAGATCCCGAATGGGTTACAACGCACTaGGACGAAGTAAACGGTGCCGGGCTTCAGGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: FRPIDPEWVTTH*DEVNGAGLQAR Trigger: GCGGGCCTGAAGCCCGGCACCGTTTACTTCGTCCAAGTGCGTTGTAACCCATTCGGGATCTATGGGTCGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| CDS TCA 72 bp | GTGAAGAGGGCCAGGTCCTTGGGGATATGGCATGAGTaGGGGCCCACAGTGTGGTACTCCTCACATGTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: VKRARSLGIWHE*GPTVWYSSHVL Trigger: TAACACATGTGAGGAGTACCACACTGTGGGCCCTCACTCATGCCATATCCCCAAGGACCTGGCCCTCTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000132648.2 |
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| CDS GCA 72 bp | TCGTACAGGCGGAAACTAAGGTTCGAGCAGTATGCGTaGTTCTTGAGCCAGCCGAGGAACTGCTTGAGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SYRRKLRFEQYA*FLSQPRNCLSS Trigger: CGAGCTCAAGCAGTTCCTCGGCTGGCTCAAGAAGCACGCATACTGCTCGAACCTTAGTTTCCGCCTGTACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| CDS CCA 72 bp | CGGGTCTTGTGTGACTTCTGCATCCAAGCACGCCACTaGTCGTACAGGCGGAAACTAAGGTTCGAGCAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: RVLCDFCIQARH*SYRRKLRFEQY Trigger: ATACTGCTCGAACCTTAGTTTCCGCCTGTACGACCAGTGGCGTGCTTGGATGCAGAAGTCACACAAGACCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000127983.2 |
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| CDS TCA 72 bp | ATGTGTTATCCTGACCGTACCACCTCAGCTTGTACTTaGGGGAGTAGTTGGTATGTAAGAATGTCTCCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: MCYPDRTTSACT*GSSWYVRMSPR Trigger: ACGGGGAGACATTCTTACATACCAACTACTCCCTCAAGTACAAGCTGAGGTGGTACGGTCAGGATAACACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008032.14 ENSMUST00000132648.2 |
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