Pregenerated sensors for CRKL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006134Ensembl transcript IDs: ENSMUST00000006293.5, ENSMUST00000231228.2, ENSMUST00000231629.2
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCACTGAAGAGGCCCACCCTGTCTGCTCCTGTCAGAGGCAGCGATaGCAGCAGGCCCACCCCCACCTTGGTGCTTCACAGCAAGGTACA | + |
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Preference number: 1 (lower is better) Translates to: FTEEAHPVCSCQRQR*QQAHPHLGASQQGT Trigger: TGTACCTTGCTGTGAAGCACCAAGGTGGGGGTGGGCCTGCTGTCATCGCTGCCTCTGACAGGAGCAGACAGGGTGGGCCTCTTCAGTGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR GCA 90 bp | CTGTGGACCAGCAAAGCGAGACCTTGCCAAGCCTCACCGTCTCCATaGAGACCATCAGCAGGCTTGCTTGCTCTCTCTGTCAGCCTCCAG | + |
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Preference number: 1 (lower is better) Translates to: LWTSKARPCQASPSP*RPSAGLLALSVSLQ Trigger: CTGGAGGCTGACAGAGAGAGCAAGCAAGCCTGCTGATGGTCTGCATGGAGACGGTGAGGCTTGGCAAGGTCTCGCTTTGCTGGTCCACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR GCA 90 bp | CTCCTGTCAGAGGCAGCGATGACAGCAGGCCCACCCCCACCTTGGTaGTTCACAGCAAGGTACACCATGACTGCTGCTGTGCACTGTTTG | + |
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Preference number: 1 (lower is better) Translates to: LLSEAAMTAGPPPPW*FTARYTMTAAVHCL Trigger: CAAACAGTGCACAGCAGCAGTCATGGTGTACCTTGCTGTGAAGCACCAAGGTGGGGGTGGGCCTGCTGTCATCGCTGCCTCTGACAGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR TCA 90 bp | CAGCAGGCCCACCCCCACCTTGGTGCTTCACAGCAAGGTACACCATaGCTGCTGCTGTGCACTGTTTGCCACATGGTAAACAAGGTACTG | + |
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Preference number: 1 (lower is better) Translates to: QQAHPHLGASQQGTP*LLLCTVCHMVNKVL Trigger: CAGTACCTTGTTTACCATGTGGCAAACAGTGCACAGCAGCAGTCATGGTGTACCTTGCTGTGAAGCACCAAGGTGGGGGTGGGCCTGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR TCA 90 bp | AGGCTTGCTTGCTCTCTCTGTCAGCCTCCAGTACAAACAAGGCAGTaGTGGATGGGAAGGAAGAGCTGCTCTGGGTTCCAGTCTCTACTG | + |
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Preference number: 1 (lower is better) Translates to: RLACSLCQPPVQTRQ*WMGRKSCSGFQSLL Trigger: CAGTAGAGACTGGAACCCAGAGCAGCTCTTCCTTCCCATCCATCACTGCCTTGTTTGTACTGGAGGCTGACAGAGAGAGCAAGCAAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR CCA 90 bp | TCCAGTACAAACAAGGCAGTGATGGATGGGAAGGAAGAGCTGCTCTaGGTTCCAGTCTCTACTGTGTGCTTCCACCAGTGTTTCCAGTTC | + |
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Preference number: 1 (lower is better) Translates to: SSTNKAVMDGKEELL*VPVSTVCFHQCFQF Trigger: GAACTGGAAACACTGGTGGAAGCACACAGTAGAGACTGGAACCCAGAGCAGCTCTTCCTTCCCATCCATCACTGCCTTGTTTGTACTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006293.5 ENSMUST00000231629.2 |
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| 3UTR CCA 90 bp | CTCATGATCGAGGGGCGTCTTCTTTTGCTCAGAAGCACTGTATTCTaGTTCTACTCAGGCTGTGGAACCAGAACAGACACCACTCTCAAG | + |
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Preference number: 1 (lower is better) Translates to: LMIEGRLLLLRSTVF*FYSGCGTRTDTTLK Trigger: CTTGAGAGTGGTGTCTGTTCTGGTTCCACAGCCTGAGTAGAACCAGAATACAGTGCTTCTGAGCAAAAGAAGACGCCCCTCGATCATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR GCA 90 bp | ATGGATGGGAAGGAAGAGCTGCTCTGGGTTCCAGTCTCTACTGTGTaGTTCCACCAGTGTTTCCAGTTCACAATCCACAAGAACTCTAAA | + |
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Preference number: 1 (lower is better) Translates to: MDGKEELLWVPVSTV*FHQCFQFTIHKNSK Trigger: TTTAGAGTTCTTGTGGATTGTGAACTGGAAACACTGGTGGAAGCACACAGTAGAGACTGGAACCCAGAGCAGCTCTTCCTTCCCATCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006293.5 ENSMUST00000231629.2 |
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| 3UTR CCA 90 bp | ACAGCCATAGCAAGTGGGTTTATCATCCCAGTACTTTCTACAACATaGCAGAGCAGACCACACAGCACTGATGATGAGAAAAGGAAGCCT | + |
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Preference number: 1 (lower is better) Translates to: TAIASGFIIPVLSTT*QSRPHSTDDEKRKP Trigger: AGGCTTCCTTTTCTCATCATCAGTGCTGTGTGGTCTGCTCTGCCATGTTGTAGAAAGTACTGGGATGATAAACCCACTTGCTATGGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR TCA 90 bp | TGTTTCCAGTTCACAATCCACAAGAACTCTAAATCAGCTACTCTTTaGCAGCATGACTATGATACAAATGCCGAGCCAGCGAGCAAGGCA | + |
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Preference number: 1 (lower is better) Translates to: CFQFTIHKNSKSATL*QHDYDTNAEPASKA Trigger: TGCCTTGCTCGCTGGCTCGGCATTTGTATCATAGTCATGCTGTCAAAGAGTAGCTGATTTAGAGTTCTTGTGGATTGTGAACTGGAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006293.5 ENSMUST00000231629.2 |
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| 3UTR GCA 90 bp | CCAGGGTTATGGGACATTCTGATCATGAAGTATTCCTTAGAGTCTTaGTGGTCAACAGTCTTGGGAAAAGGGAAACCCTGTTCTCAAAAA | + |
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Preference number: 1 (lower is better) Translates to: PGLWDILIMKYSLES*WSTVLGKGKPCSQK Trigger: TTTTTGAGAACAGGGTTTCCCTTTTCCCAAGACTGTTGACCAGCAAGACTCTAAGGAATACTTCATGATCAGAATGTCCCATAACCCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR TCA 90 bp | TGCTGCTTTCTATCAGTGAGAGAGATTTCCATGATTAAAAATCGATaGGCTTCTAAGTCAGAGAATTACTATTGTTGGCACGCACGCACG | + |
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Preference number: 1 (lower is better) Translates to: CCFLSVREISMIKNR*ASKSENYYCWHART Trigger: CGTGCGTGCGTGCCAACAATAGTAATTCTCTGACTTAGAAGCTCATCGATTTTTAATCATGGAAATCTCTCTCACTGATAGAAAGCAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR CCA 90 bp | ACATGTGCCAAATTAACTGATTACATAAAGCAAACTCCAGGGTTATaGGACATTCTGATCATGAAGTATTCCTTAGAGTCTTGCTGGTCA | + |
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Preference number: 1 (lower is better) Translates to: TCAKLTDYIKQTPGL*DILIMKYSLESCWS Trigger: TGACCAGCAAGACTCTAAGGAATACTTCATGATCAGAATGTCCCATAACCCTGGAGTTTGCTTTATGTAATCAGTTAATTTGGCACATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR-3UTR TCA 90 bp | CAGCAGTTAACCAGGGAGGGGTTCACTGGTTCCAGAGTGAGGAGTCCACAGAAAAGGTTCAGGCCCCAGTaGTGGGGTATCCCTTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: QQLTREGFTGSRVRSPQKRFRPQ*WGIPWG Trigger: CCCCCAAGGGATACCCCATCACTGGGGCCTGAACCT...TTTCTGTGGACTCCTCACTCTGGAACCAGTGAACCCCTCCCTGGTTAACTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR-3UTR GCA 90 bp | ACAGCTGTAGAGGAAGGCTGGCACAGTGCCAGGATCGTGCAACTTGAAAAGAGGGCCTCACCGTCTCCATaGAGACCATCAGCAGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: TAVEEGWHSARIVQLEKRASPSP*RPSAGL Trigger: CAAGCCTGCTGATGGTCTGCATGGAGACGGTGAGGC...CCTCTTTTCAAGTTGCACGATCCTGGCACTGTGCCAGCCTTCCTCTACAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR CAA 90 bp | CTTGCCAAGCCTCACCGTCTCCATGCAGACCATCAGCAGGCTTGCTaGCTCTCTCTGTCAGCCTCCAGTACAAACAAGGCAGTGATGGAT | + |
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Preference number: 2 (lower is better) Translates to: LAKPHRLHADHQQAC*LSLSASSTNKAVMD Trigger: ATCCATCACTGCCTTGTTTGTACTGGAGGCTGACAGAGAGAGCAAGCAAGCCTGCTGATGGTCTGCATGGAGACGGTGAGGCTTGGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR CAA 90 bp | AGACCTTGCCAAGCCTCACCGTCTCCATGCAGACCATCAGCAGGCTaGCTTGCTCTCTCTGTCAGCCTCCAGTACAAACAAGGCAGTGAT | + |
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Preference number: 2 (lower is better) Translates to: RPCQASPSPCRPSAG*LALSVSLQYKQGSD Trigger: ATCACTGCCTTGTTTGTACTGGAGGCTGACAGAGAGAGCAAGCAAGCCTGCTGATGGTCTGCATGGAGACGGTGAGGCTTGGCAAGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR-3UTR TCA 90 bp | CAGTTAACCAGGGAGGGGTTCACTGGTTCCAGAGTGAGGAGTCCACAGAAAGCACAGAGTCTCTTCCAGTaGGCACAGAGGGTTACGTCT | + |
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Preference number: 2 (lower is better) Translates to: QLTREGFTGSRVRSPQKAQSLFQ*AQRVTS Trigger: AGACGTAACCCTCTGTGCTCACTGGAAGAGACTCTG...TGCTTTCTGTGGACTCCTCACTCTGGAACCAGTGAACCCCTCCCTGGTTAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR-3UTR GCA 90 bp | GGAAGAGCTGCTCTGGGTTCCAGTCTCTACTGTGTGCTTCCACCAGTGTTTCCAATCAGCAGGCTTGCTTaGTCTCTCTGTCAGCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: GRAALGSSLYCVLPPVFPISRLA*SLCQPP Trigger: TGGAGGCTGACAGAGAGAGCAAGCAAGCCTGCTGAT...TGGAAACACTGGTGGAAGCACACAGTAGAGACTGGAACCCAGAGCAGCTCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR-3UTR GCA 90 bp | CAGTTAACCAGGGAGGGGTTCACTGGTTCCAGAGTGAGGAGTCCACAGAAAGCAGTGGCATCAGAGCAGTaGAGAGTGACAAGCATGCCT | + |
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Preference number: 2 (lower is better) Translates to: QLTREGFTGSRVRSPQKAVASEQ*RVTSMP Trigger: AGGCATGCTTGTCACTCTGCACTGCTCTGATGCCAC...TGCTTTCTGTGGACTCCTCACTCTGGAACCAGTGAACCCCTCCCTGGTTAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR-3UTR GCA 90 bp | ACAGCTGTAGAGGAAGGCTGGCACAGTGCCAGGATCGTGCAACTTGAAAAGAGGATGGGAAGGAAGAGCTaGTCTGGGTTCCAGTCTCTA | + |
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Preference number: 2 (lower is better) Translates to: TAVEEGWHSARIVQLEKRMGRKS*SGFQSL Trigger: TAGAGACTGGAACCCAGAGCAGCTCTTCCTTCCCAT...CCTCTTTTCAAGTTGCACGATCCTGGCACTGTGCCAGCCTTCCTCTACAGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR-3UTR CCA 90 bp | GCTGCTCTGGGTTCCAGTCTCTACTGTGTGCTTCCACCAGTGTTTCCAGTTCACAAGGAAGAGCTGCTCTaGGTTCCAGTCTCTACTGTG | + |
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Preference number: 2 (lower is better) Translates to: AALGSSLYCVLPPVFPVHKEELL*VPVSTV Trigger: CACAGTAGAGACTGGAACCCAGAGCAGCTCTTCCTT...GTGAACTGGAAACACTGGTGGAAGCACACAGTAGAGACTGGAACCCAGAGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006293.5 ENSMUST00000231629.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAGCTGCTCTGGGTTCCAGTCTCTACTGTGTGCTTCCACCAGTGTTTCCAGTCAAGGCAGTGATGGATaGGAAGGAAGAGCTGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: KSCSGFQSLLCASTSVSSQGSDG*EGRAAL Trigger: CAGAGCAGCTCTTCCTTCCCATCCATCACTGCCTTG...ACTGGAAACACTGGTGGAAGCACACAGTAGAGACTGGAACCCAGAGCAGCTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006293.5 ENSMUST00000231629.2 |
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| 3UTR-3UTR GCA 90 bp | AGATCCCATCTCGGATTTCAAAAGCTTACTGGCAGCCGGTTATCTAGCACGTGTGACCATCAGCAGGCTTaGTTGCTCTCTCTGTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: RSHLGFQKLTGSRLSSTCDHQQA*LLSLSA Trigger: GGCTGACAGAGAGAGCAAGCAAGCCTGCTGATGGTC...ACACGTGCTAGATAACCGGCTGCCAGTAAGCTTTTGAAATCCGAGATGGGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR-3UTR CCA 90 bp | AGCTGCTCTGGGTTCCAGTCTCTACTGTGTGCTTCCACCAGTGTTTCCAGTTCAAAGGAAGAGCTGCTCTaGGTTCCAGTCTCTACTGTG | + |
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Preference number: 2 (lower is better) Translates to: SCSGFQSLLCASTSVSSSKEELL*VPVSTV Trigger: CACAGTAGAGACTGGAACCCAGAGCAGCTCTTCCTT...TGAACTGGAAACACTGGTGGAAGCACACAGTAGAGACTGGAACCCAGAGCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006293.5 ENSMUST00000231629.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTTAACCAGGGAGGGGTTCACTGGTTCCAGAGTGAGGAGTCCACAGAAAGCAAAAACCACTGTTCTGTaGACCAGCAAAGCGAGACCT | + |
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Preference number: 2 (lower is better) Translates to: QLTREGFTGSRVRSPQKAKTTVL*TSKARP Trigger: AGGTCTCGCTTTGCTGGTCCACAGAACAGTGGTTTT...TGCTTTCTGTGGACTCCTCACTCTGGAACCAGTGAACCCCTCCCTGGTTAACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR-3UTR CCA 90 bp | CAGTTAACCAGGGAGGGGTTCACTGGTTCCAGAGTGAGGAGTCCACAGAAAGCAACCAACACCCTTTTCTaGCCTCCTAACAAACTACCC | + |
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Preference number: 2 (lower is better) Translates to: QLTREGFTGSRVRSPQKATNTLF*PPNKLP Trigger: GGGTAGTTTGTTAGGAGGCCAGAAAAGGGTGTTGGT...TGCTTTCTGTGGACTCCTCACTCTGGAACCAGTGAACCCCTCCCTGGTTAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR CAA 90 bp | TTGAGTAAAGGTTACAAGAGCAGTGGCCATCAGTCTTGGCCCATCTaGTCTGTAAACAGCTGTAGAGGAAGGCTGGCACAGTGCCAGGAT | + |
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Preference number: 2 (lower is better) Translates to: LSKGYKSSGHQSWPI*SVNSCRGRLAQCQD Trigger: ATCCTGGCACTGTGCCAGCCTTCCTCTACAGCTGTTTACAGACAAGATGGGCCAAGACTGATGGCCACTGCTCTTGTAACCTTTACTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR-3UTR TCA 90 bp | GTCTGCTACGTTCGTTCTGTGTGGAGGTGTATCCTCATCAGGGTCCAACTGAAAGTACAAACAAGGCAGTaGTGGATGGGAAGGAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: VCYVRSVWRCILIRVQLKVQTRQ*WMGRKS Trigger: GCTCTTCCTTCCCATCCATCACTGCCTTGTTTGTAC...TTTCAGTTGGACCCTGATGAGGATACACCTCCACACAGAACGAACGTAGCAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR-3UTR CCA 90 bp | GTTCCAGAGGATCCAACCAACACCCTTTTCTGGCCTCCTAACAAACTACCCATGGGGTGGCCTCTGTGGTaGAACACAGCAATGCAATTT | + |
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Preference number: 2 (lower is better) Translates to: VPEDPTNTLFWPPNKLPMGWPLW*NTAMQF Trigger: AAATTGCATTGCTGTGTTCCACCACAGAGGCCACCC...CATGGGTAGTTTGTTAGGAGGCCAGAAAAGGGTGTTGGTTGGATCCTCTGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR-3UTR CCA 90 bp | GTCTGCTACGTTCGTTCTGTGTGGAGGTGTATCCTCATCAGGGTCCAACTGAAAGTTCTACTCAGGCTGTaGAACCAGAACAGACACCAC | + |
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Preference number: 2 (lower is better) Translates to: VCYVRSVWRCILIRVQLKVLLRL*NQNRHH Trigger: GTGGTGTCTGTTCTGGTTCCACAGCCTGAGTAGAAC...TTTCAGTTGGACCCTGATGAGGATACACCTCCACACAGAACGAACGTAGCAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR-3UTR GCA 90 bp | AGATCCCATCTCGGATTTCAAAAGCTTACTGGCAGCCGGTTATCTAGCACGTGTTCTAGAGCTCTGGTTTaGCATGTGTGGATGAGGGAT | + |
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Preference number: 2 (lower is better) Translates to: RSHLGFQKLTGSRLSSTCSRALV*HVWMRD Trigger: ATCCCTCATCCACACATGGCAAACCAGAGCTCTAGA...ACACGTGCTAGATAACCGGCTGCCAGTAAGCTTTTGAAATCCGAGATGGGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR-3UTR TCA 90 bp | GGAAGAGCTGCTCTGGGTTCCAGTCTCTACTGTGTGCTTCCACCAGTGTTTCCAAAATCAGCTACTCTTTaGCAGCATGACTATGATACA | + |
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Preference number: 2 (lower is better) Translates to: GRAALGSSLYCVLPPVFPKSATL*QHDYDT Trigger: TGTATCATAGTCATGCTGTCAAAGAGTAGCTGATTT...TGGAAACACTGGTGGAAGCACACAGTAGAGACTGGAACCCAGAGCAGCTCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006293.5 ENSMUST00000231629.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCCAGAGGATCCAACCAACACCCTTTTCTGGCCTCCTAACAAACTACCCATGGGTGGAACACAGCAATaGAATTTAACTCACGGATCT | + |
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Preference number: 2 (lower is better) Translates to: VPEDPTNTLFWPPNKLPMGGTQQ*NLTHGS Trigger: AGATCCGTGAGTTAAATTGCATTGCTGTGTTCCACC...CATGGGTAGTTTGTTAGGAGGCCAGAAAAGGGTGTTGGTTGGATCCTCTGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR-3UTR CCA 90 bp | CTTCTTGCAGAGGACCCAGGTTCAATTCCTAGAACCCACAGAGTAACTCCACAGAGAAAACTGAGTTGGTaGCAAAACCACTGTTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: LLAEDPGSIPRTHRVTPQRKLSW*QNHCSV Trigger: CACAGAACAGTGGTTTTGCCACCAACTCAGTTTTCT...CTGTGGAGTTACTCTGTGGGTTCTAGGAATTGAACCTGGGTCCTCTGCAAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGTTAACCAGGGAGGGGTTCACTGGTTCCAGAGTGAGGAGTCCACAGAAAGACAAAGGGTTTTGTTaGTTTTGTCACCTGAATATG | + |
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Preference number: 2 (lower is better) Translates to: QQLTREGFTGSRVRSPQKDKGFC*FCHLNM Trigger: CATATTCAGGTGACAAAACCAACAAAACCCTTTGTC...TTTCTGTGGACTCCTCACTCTGGAACCAGTGAACCCCTCCCTGGTTAACTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR-3UTR TCA 90 bp | CAGCTTTCAGAGACAAAAAGAAGTAACCTCTACAGACGTGACACTCCCCATACCTCGTCCAAAGAAAACTaGGTTGGTGGCAAAACCACT | + |
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Preference number: 2 (lower is better) Translates to: QLSETKRSNLYRRDTPHTSSKEN*VGGKTT Trigger: AGTGGTTTTGCCACCAACTCAGTTTTCTTTGGACGA...GGTATGGGGAGTGTCACGTCTGTAGAGGTTACTTCTTTTTGTCTCTGAAAGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR-3UTR TCA 90 bp | CTTCTTGCAGAGGACCCAGGTTCAATTCCTAGAACCCACAGAGTAACTCCACAGAAATCAGCTACTCTTTaGCAGCATGACTATGATACA | + |
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Preference number: 2 (lower is better) Translates to: LLAEDPGSIPRTHRVTPQKSATL*QHDYDT Trigger: TGTATCATAGTCATGCTGTCAAAGAGTAGCTGATTT...CTGTGGAGTTACTCTGTGGGTTCTAGGAATTGAACCTGGGTCCTCTGCAAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR-3UTR CCA 90 bp | AGATCCCATCTCGGATTTCAAAAGCTTACTGGCAGCCGGTTATCTAGCACGTGTTTTAGTTACGTACAGTaGCTTCAGTTTGGAAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: RSHLGFQKLTGSRLSSTCFSYVQ*LQFGSS Trigger: TGAGCTTCCAAACTGAAGCCACTGTACGTAACTAAA...ACACGTGCTAGATAACCGGCTGCCAGTAAGCTTTTGAAATCCGAGATGGGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR-3UTR CCA 90 bp | TTGGGAAAAGGGAAACCCTGTTCTCAAAAATGGCTGTTTATGCTAAGCAAGGTGTACGTTCGTTCTGTGTaGAGGTGTATCCTCATCAGG | + |
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Preference number: 2 (lower is better) Translates to: LGKGKPCSQKWLFMLSKVYVRSV*RCILIR Trigger: CCTGATGAGGATACACCTCCACACAGAACGAACGTA...CACCTTGCTTAGCATAAACAGCCATTTTTGAGAACAGGGTTTCCCTTTTCCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR CAA 90 bp | TCCAGGGTTATGGGACATTCTGATCATGAAGTATTCCTTAGAGTCTaGCTGGTCAACAGTCTTGGGAAAAGGGAAACCCTGTTCTCAAAA | + |
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Preference number: 2 (lower is better) Translates to: SRVMGHSDHEVFLRV*LVNSLGKRETLFSK Trigger: TTTTGAGAACAGGGTTTCCCTTTTCCCAAGACTGTTGACCAGCAAGACTCTAAGGAATACTTCATGATCAGAATGTCCCATAACCCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR-3UTR TCA 90 bp | AGATCCCATCTCGGATTTCAAAAGCTTACTGGCAGCCGGTTATCTAGCACGTGTAGCCTGATGGACTACTaGTTTAAAGAGAAACTAATG | + |
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Preference number: 2 (lower is better) Translates to: RSHLGFQKLTGSRLSSTCSLMDY*FKEKLM Trigger: CATTAGTTTCTCTTTAAATCAGTAGTCCATCAGGCT...ACACGTGCTAGATAACCGGCTGCCAGTAAGCTTTTGAAATCCGAGATGGGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR-3UTR TCA 90 bp | GTGGTGACTCAAACCTTTATAATTTCAGCTGAGGCTGGGATGGAAATCTTGAAGGTTGGTTTTGTCACCTaGATATGTTCCATTAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: VVTQTFIISAEAGMEILKVGFVT*ICSISS Trigger: AGAACTAATGGAACATATTCAGGTGACAAAACCAAC...CTTCAAGATTTCCATCCCAGCCTCAGCTGAAATTATAAAGGTTTGAGTCACCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR CAA 90 bp | GTCTTTAAGAGAAATAAATATAGTGGACAAAGGGTTTTGTTGGTTTaGTCACCTGAATATGTTCCATTAGTTCTCAAAGCCTCAGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: VFKRNKYSGQRVLLV*SPEYVPLVLKASGL Trigger: CAGGCCTGAGGCTTTGAGAACTAATGGAACATATTCAGGTGACAAAACCAACAAAACCCTTTGTCCACTATATTTATTTCTCTTAAAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR CCA 72 bp | TCAGAGGCAGCGATGACAGCAGGCCCACCCCCACCTTaGTGCTTCACAGCAAGGTACACCATGACTGCTGCT | + |
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Preference number: 3 (lower is better) Translates to: SEAAMTAGPPPP*CFTARYTMTAA Trigger: AGCAGCAGTCATGGTGTACCTTGCTGTGAAGCACCAAGGTGGGGGTGGGCCTGCTGTCATCGCTGCCTCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR GCA 72 bp | AGCAAAGCGAGACCTTGCCAAGCCTCACCGTCTCCATaGAGACCATCAGCAGGCTTGCTTGCTCTCTCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SKARPCQASPSP*RPSAGLLALSV Trigger: GACAGAGAGAGCAAGCAAGCCTGCTGATGGTCTGCATGGAGACGGTGAGGCTTGGCAAGGTCTCGCTTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCTGTAGAGGAAGGCTGGCACAGTGCCAGGATCGTGCAACTTGAAAAGAGGCATCAGCAGGCTTGCTaGCTCTCTCTGTCAGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: TAVEEGWHSARIVQLEKRHQQAC*LSLSAS Trigger: GGAGGCTGACAGAGAGAGCAAGCAAGCCTGCTGATG...CCTCTTTTCAAGTTGCACGATCCTGGCACTGTGCCAGCCTTCCTCTACAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR GCA 72 bp | CCGCCAGCAGCTCGGTGTAACTTGCATGTGACAGAGTaGTTCCCACTTCAAAGGAGACTGACAGGCAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: PPAARCNLHVTE*FPLQRRLTGRR Trigger: CCTTCTGCCTGTCAGTCTCCTTTGAAGTGGGAAGCACTCTGTCACATGCAAGTTACACCGAGCTGCTGGCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006293.5 ENSMUST00000231629.2 |
||
| 3UTR GCA 72 bp | CTCACCGTCTCCATGCAGACCATCAGCAGGCTTGCTTaGTCTCTCTGTCAGCCTCCAGTACAAACAAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LTVSMQTISRLA*SLCQPPVQTRQ Trigger: CTGCCTTGTTTGTACTGGAGGCTGACAGAGAGAGCAAGCAAGCCTGCTGATGGTCTGCATGGAGACGGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR CCA 72 bp | AGCTGCCTGGACAAGCTAGGTCAGTACAGGAAGGGCTaGGTGGCCTCTGTGGTGGAACACAGCAATGCAATT | + |
|
Preference number: 3 (lower is better) Translates to: SCLDKLGQYRKG*VASVVEHSNAI Trigger: AATTGCATTGCTGTGTTCCACCACAGAGGCCACCCAGCCCTTCCTGTACTGACCTAGCTTGTCCAGGCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR TCA 72 bp | CACCCCCACCTTGGTGCTTCACAGCAAGGTACACCATaGCTGCTGCTGTGCACTGTTTGCCACATGGTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: HPHLGASQQGTP*LLLCTVCHMVN Trigger: GTTTACCATGTGGCAAACAGTGCACAGCAGCAGTCATGGTGTACCTTGCTGTGAAGCACCAAGGTGGGGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR TCA 72 bp | AGAGGAAGGCTGGCACAGTGCCAGGATCGTGCAACTTaGAAAGAGGGCAGAGTCTCTTCCAGTGAGCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: RGRLAQCQDRAT*KEGRVSSSEHR Trigger: TCTGTGCTCACTGGAAGAGACTCTGCCCTCTTTTCAAGTTGCACGATCCTGGCACTGTGCCAGCCTTCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR GCA 72 bp | CAAGGCCACTGTCCTCCTGTCTCAGAACTGTCCTCCTaGTCCTTCAGAATATACAAGCAGCTCAGCGTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: QGHCPPVSELSS*SFRIYKQLSVH Trigger: GTGGACGCTGAGCTGCTTGTATATTCTGAAGGAGCAGGAGGACAGTTCTGAGACAGGAGGACAGTGGCCTTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR TCA 72 bp | GGATCTAGTAAGCCCACAGACTTCAAACGTTTTCACTaGAGAGGCCCACCCTGTCTGCTCCTGTCAGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GSSKPTDFKRFH*RGPPCLLLSEA Trigger: TGCCTCTGACAGGAGCAGACAGGGTGGGCCTCTTCAGTGAAAACGTTTGAAGTCTGTGGGCTTACTAGATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR GCA 72 bp | GAAGGGCTGGGTGGCCTCTGTGGTGGAACACAGCAATaGAATTTAACTCACGGATCTAGTAAGCCCACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: EGLGGLCGGTQQ*NLTHGSSKPTD Trigger: GTCTGTGGGCTTACTAGATCCGTGAGTTAAATTGCATTGCTGTGTTCCACCACAGAGGCCACCCAGCCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR CCA 72 bp | AACAAGGCAGTGATGGATGGGAAGGAAGAGCTGCTCTaGGTTCCAGTCTCTACTGTGTGCTTCCACCAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: NKAVMDGKEELL*VPVSTVCFHQC Trigger: ACACTGGTGGAAGCACACAGTAGAGACTGGAACCCAGAGCAGCTCTTCCTTCCCATCCATCACTGCCTTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006293.5 ENSMUST00000231629.2 |
||
| 3UTR CCA 72 bp | GCTCAGAAGCACTGTATTCTGGTTCTACTCAGGCTGTaGAACCAGAACAGACACCACTCTCAAGCTGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: AQKHCILVLLRL*NQNRHHSQAAW Trigger: CCAGGCAGCTTGAGAGTGGTGTCTGTTCTGGTTCCACAGCCTGAGTAGAACCAGAATACAGTGCTTCTGAGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR CCA 72 bp | TCCACGCTCACAGCAGTTAACCAGGGAGGGGTTCACTaGTTCCAGAGTGAGGAGTCCACAGAAAGCATTAGT | + |
|
Preference number: 3 (lower is better) Translates to: STLTAVNQGGVH*FQSEESTESIS Trigger: ACTAATGCTTTCTGTGGACTCCTCACTCTGGAACCAGTGAACCCCTCCCTGGTTAACTGCTGTGAGCGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAGTTAACCAGGGAGGGGTTCACTGGTTCCAGAGTGAGGAGTCCACAGAAAGTATTCCTTAGAGTCTaGCTGGTCAACAGTCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: QQLTREGFTGSRVRSPQKVFLRV*LVNSLG Trigger: CCCAAGACTGTTGACCAGCAAGACTCTAAGGAATAC...TTTCTGTGGACTCCTCACTCTGGAACCAGTGAACCCCTCCCTGGTTAACTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR-3UTR CAA 90 bp | CAGTTAACCAGGGAGGGGTTCACTGGTTCCAGAGTGAGGAGTCCACAGAAAGCACAGTCTTGGCCCATCTaGTCTGTAAACAGCTGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: QLTREGFTGSRVRSPQKAQSWPI*SVNSCR Trigger: TCTACAGCTGTTTACAGACAAGATGGGCCAAGACTG...TGCTTTCTGTGGACTCCTCACTCTGGAACCAGTGAACCCCTCCCTGGTTAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGCTGCTCTGGGTTCCAGTCTCTACTGTGTGCTTCCACCAGTGTTTCCAGTCACCTCGCCTTCCCATaGGCCATTGATATTCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: KSCSGFQSLLCASTSVSSHLAFP*AIDIHP Trigger: AGGATGAATATCAATGGCCAATGGGAAGGCGAGGTG...ACTGGAAACACTGGTGGAAGCACACAGTAGAGACTGGAACCCAGAGCAGCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231629.2 |
||
| 3UTR CCA 72 bp | GAGGGGCGTCTTCTTTTGCTCAGAAGCACTGTATTCTaGTTCTACTCAGGCTGTGGAACCAGAACAGACACC | + |
|
Preference number: 3 (lower is better) Translates to: EGRLLLLRSTVF*FYSGCGTRTDT Trigger: GGTGTCTGTTCTGGTTCCACAGCCTGAGTAGAACCAGAATACAGTGCTTCTGAGCAAAAGAAGACGCCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR-3UTR CAA 90 bp | GTCTGCTACGTTCGTTCTGTGTGGAGGTGTATCCTCATCAGGGTCCAACTGAAAGAGGGGCGTCTTCTTTaGCTCAGAAGCACTGTATTC | + |
|
Preference number: 3 (lower is better) Translates to: VCYVRSVWRCILIRVQLKEGRLL*LRSTVF Trigger: GAATACAGTGCTTCTGAGCAAAAGAAGACGCCCCTC...TTTCAGTTGGACCCTGATGAGGATACACCTCCACACAGAACGAACGTAGCAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTGACTCAAACCTTTATAATTTCAGCTGAGGCTGGGATGGAAATCTTGAAGGTGATGGGGTATCCCTaGGGGGTTGTGCCCTCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: VVTQTFIISAEAGMEILKVMGYP*GVVPSV Trigger: CACTGAGGGCACAACCCCCAAGGGATACCCCATCAC...CTTCAAGATTTCCATCCCAGCCTCAGCTGAAATTATAAAGGTTTGAGTCACCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR TCA 72 bp | GCTGGGTGTGGTGACTCAAACCTTTATAATTTCAGCTaGGGCTGGGATGGAAATCTTGAAGCCAGCATGGGC | + |
|
Preference number: 3 (lower is better) Translates to: AGCGDSNLYNFS*GWDGNLEASMG Trigger: GCCCATGCTGGCTTCAAGATTTCCATCCCAGCCTCAGCTGAAATTATAAAGGTTTGAGTCACCACACCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR GCA 72 bp | AAGGAAGAGCTGCTCTGGGTTCCAGTCTCTACTGTGTaGTTCCACCAGTGTTTCCAGTTCACAATCCACAAG | + |
|
Preference number: 3 (lower is better) Translates to: KEELLWVPVSTV*FHQCFQFTIHK Trigger: CTTGTGGATTGTGAACTGGAAACACTGGTGGAAGCACACAGTAGAGACTGGAACCCAGAGCAGCTCTTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006293.5 ENSMUST00000231629.2 |
||
| 3UTR-3UTR CAA 90 bp | AGATCCCATCTCGGATTTCAAAAGCTTACTGGCAGCCGGTTATCTAGCACGTGTTACAGTGGCTTCAGTTaGGAAGCTCAGAGACATGGA | + |
|
Preference number: 3 (lower is better) Translates to: RSHLGFQKLTGSRLSSTCYSGFS*EAQRHG Trigger: TCCATGTCTCTGAGCTTCCAAACTGAAGCCACTGTA...ACACGTGCTAGATAACCGGCTGCCAGTAAGCTTTTGAAATCCGAGATGGGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCTGTAGAGGAAGGCTGGCACAGTGCCAGGATCGTGCAACTTGAAAAGAGGGGACAAAGGGTTTTGTaGGTTTTGTCACCTGAATAT | + |
|
Preference number: 3 (lower is better) Translates to: TAVEEGWHSARIVQLEKRGQRVL*VLSPEY Trigger: ATATTCAGGTGACAAAACCAACAAAACCCTTTGTCC...CCTCTTTTCAAGTTGCACGATCCTGGCACTGTGCCAGCCTTCCTCTACAGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR CCA 72 bp | TTTACTTCCTCTGTCGTCCAAAGAAAACTGAGTTGGTaGCAAAACCACTGTTCTGTGGACCAGCAAAGCGAG | + |
|
Preference number: 3 (lower is better) Translates to: FTSSVVQRKLSW*QNHCSVDQQSE Trigger: CTCGCTTTGCTGGTCCACAGAACAGTGGTTTTGCCACCAACTCAGTTTTCTTTGGACGACAGAGGAAGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTGACTCAAACCTTTATAATTTCAGCTGAGGCTGGGATGGAAATCTTGAAGGAAAACCAGCCAGACTaGAGGAGTTCGGGACAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: VVTQTFIISAEAGMEILKENQPD*RSSGQN Trigger: ATTCTGTCCCGAACTCCTCAAGTCTGGCTGGTTTTC...CTTCAAGATTTCCATCCCAGCCTCAGCTGAAATTATAAAGGTTTGAGTCACCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR-3UTR CAA 90 bp | TTGGGAAAAGGGAAACCCTGTTCTCAAAAATGGCTGTTTATGCTAAGCAAGGTGGCTGGGATGGAAATCTaGAAGCCAGCATGGGCAATT | + |
|
Preference number: 3 (lower is better) Translates to: LGKGKPCSQKWLFMLSKVAGMEI*KPAWAI Trigger: AATTGCCCATGCTGGCTTCAAGATTTCCATCCCAGC...CACCTTGCTTAGCATAAACAGCCATTTTTGAGAACAGGGTTTCCCTTTTCCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR GCA 72 bp | GGGTCTTCCCAGAAGAGTGGGACTTGGGGAAGATGCTaGTTTCTATCAGTGAGAGAGATTTCCATGATTAAA | + |
|
Preference number: 3 (lower is better) Translates to: GSSQKSGTWGRC*FLSVREISMIK Trigger: TTTAATCATGGAAATCTCTCTCACTGATAGAAAGCAGCATCTTCCCCAAGTCCCACTCTTCTGGGAAGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR CCA 72 bp | TCAGCTGAGGCTGGGATGGAAATCTTGAAGCCAGCATaGGCAATTTATAGAGATCCCATCTCGGATTTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SAEAGMEILKPA*AIYRDPISDFK Trigger: TTTGAAATCCGAGATGGGATCTCTATAAATTGCCCATGCTGGCTTCAAGATTTCCATCCCAGCCTCAGCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR CCA 72 bp | GCAAGTGGGTTTATCATCCCAGTACTTTCTACAACATaGCAGAGCAGACCACACAGCACTGATGATGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: ASGFIIPVLSTT*QSRPHSTDDEK Trigger: TTTCTCATCATCAGTGCTGTGTGGTCTGCTCTGCCATGTTGTAGAAAGTACTGGGATGATAAACCCACTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR TCA 72 bp | AACTGTGTAACTGGCCAGAAGGCAAGTCTTAAATCTTaGTTTAGGCAGAGTCTGGGGCCTGAACACTTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: NCVTGQKASLKS*FRQSLGPEHLS Trigger: ACTTAAGTGTTCAGGCCCCAGACTCTGCCTAAATCAAGATTTAAGACTTGCCTTCTGGCCAGTTACACAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR TCA 72 bp | TTCACAATCCACAAGAACTCTAAATCAGCTACTCTTTaGCAGCATGACTATGATACAAATGCCGAGCCAGCG | + |
|
Preference number: 3 (lower is better) Translates to: FTIHKNSKSATL*QHDYDTNAEPA Trigger: CGCTGGCTCGGCATTTGTATCATAGTCATGCTGTCAAAGAGTAGCTGATTTAGAGTTCTTGTGGATTGTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006293.5 ENSMUST00000231629.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTGACTCAAACCTTTATAATTTCAGCTGAGGCTGGGATGGAAATCTTGAAGAGTGGACAAAGGGTTTaGTTGGTTTTGTCACCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: VVTQTFIISAEAGMEILKSGQRV*LVLSPE Trigger: TTCAGGTGACAAAACCAACAAAACCCTTTGTCCACT...CTTCAAGATTTCCATCCCAGCCTCAGCTGAAATTATAAAGGTTTGAGTCACCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR TCA 72 bp | AACACCCTTTTCTGGCCTCCTAACAAACTACCCATGTaGTACACATACATACATGTAGTGGAAACACCCATA | + |
|
Preference number: 3 (lower is better) Translates to: NTLFWPPNKLPM*YTYIHVVETPI Trigger: TATGGGTGTTTCCACTACATGTATGTATGTGTATCACATGGGTAGTTTGTTAGGAGGCCAGAAAAGGGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR TCA 72 bp | GGAAGCTGCATAGACATTTACATGTGCCAAATTAACTaGTTACATAAAGCAAACTCCAGGGTTATGGGACAT | + |
|
Preference number: 3 (lower is better) Translates to: GSCIDIYMCQIN*LHKANSRVMGH Trigger: ATGTCCCATAACCCTGGAGTTTGCTTTATGTAATCAGTTAATTTGGCACATGTAAATGTCTATGCAGCTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR TCA 72 bp | CTATCAGTGAGAGAGATTTCCATGATTAAAAATCGATaGGCTTCTAAGTCAGAGAATTACTATTGTTGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LSVREISMIKNR*ASKSENYYCWH Trigger: GTGCCAACAATAGTAATTCTCTGACTTAGAAGCTCATCGATTTTTAATCATGGAAATCTCTCTCACTGATAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR CAA 72 bp | GTCAGAGGCAGCGATGACAGCAGGCCCACCCCCACCTaGGTGCTTCACAGCAAGGTACACCATGACTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VRGSDDSRPTPT*VLHSKVHHDCC Trigger: GCAGCAGTCATGGTGTACCTTGCTGTGAAGCACCAAGGTGGGGGTGGGCCTGCTGTCATCGCTGCCTCTGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| CDS-3UTR GCA 90 bp | GGGAAAAGCCCCTTGCGCCCATTCACCTCGCCTTCCCATTGGCCATTGATATTCCCTTGGAGACGAGTCTaGGCCTCCTGGCGAGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: GKSPLRPFTSPSHWPLIFPWRRV*ASWRVT Trigger: AGTGACTCGCCAGGAGGCGCAGACTCGTCTCCAAGG...GAATATCAATGGCCAATGGGAAGGCGAGGTGAATGGGCGCAAGGGGCTTTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231629.2 |
||
| CDS-3UTR GCA 90 bp | CGGTGTAACTTGCATGTGACAGAGTGCTTCCCACTTCAAAGGAGACTGACAGGCCCCGGCCGTCCTTGTTaGGGGCACTCCACCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RCNLHVTECFPLQRRLTGPGRPC*GHSTTA Trigger: AGCAGTGGTGGAGTGCCCGCAACAAGGACGGCCGGG...GCCTGTCAGTCTCCTTTGAAGTGGGAAGCACTCTGTCACATGCAAGTTACACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| CDS-3UTR CCA 90 bp | CGGTGTAACTTGCATGTGACAGAGTGCTTCCCACTTCAAAGGAGACTGACAGGCCCATGGCGCTGGCCTTaGAGACGAGTCTGCGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RCNLHVTECFPLQRRLTGPWRWP*RRVCAS Trigger: GGAGGCGCAGACTCGTCTCCAAGGCCAGCGCCATGG...GCCTGTCAGTCTCCTTTGAAGTGGGAAGCACTCTGTCACATGCAAGTTACACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006293.5 ENSMUST00000231629.2 |
||
| CDS-3UTR GCA 90 bp | GCATGTGACAGAGTGCTTCCCACTTCAAAGGAGACTGACAGGCAGAAGGAGGCACCTTGGAGACGAGTCTaGGCCTCCTGGCGAGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: ACDRVLPTSKETDRQKEAPWRRV*ASWRVT Trigger: AGTGACTCGCCAGGAGGCGCAGACTCGTCTCCAAGG...TGCCTCCTTCTGCCTGTCAGTCTCCTTTGAAGTGGGAAGCACTCTGTCACATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006293.5 ENSMUST00000231629.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTTGCAGAGGACCCAGGTTCAATTCCTAGAACCCACAGAGTAACTCCACAGCGAGTCTGCGCCTCCTaGCGAGTCACTGGCCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LLAEDPGSIPRTHRVTPQRVCAS*RVTGPM Trigger: CATGGGGCCAGTGACTCGCCAGGAGGCGCAGACTCG...CTGTGGAGTTACTCTGTGGGTTCTAGGAATTGAACCTGGGTCCTCTGCAAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| CDS-3UTR CCA 90 bp | CAGCTACTCTTTGACAGCATGACTATGATACAAATGCCGAGCCAGCGAGCAAGGCGAGTCTGCGCCTCCTaGCGAGTCACTGGCCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: QLLFDSMTMIQMPSQRARRVCAS*RVTGPM Trigger: CATGGGGCCAGTGACTCGCCAGGAGGCGCAGACTCG...CCTTGCTCGCTGGCTCGGCATTTGTATCATAGTCATGCTGTCAAAGAGTAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006293.5 ENSMUST00000231629.2 |
||
| CDS-3UTR CCA 90 bp | TTGCGCCCATTCACCTCGCCTTCCCATTGGCCATTGATATTCATCCTTGTGACTCCATGGCGCTGGCCTTaGAGACGAGTCTGCGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRPFTSPSHWPLIFILVTPWRWP*RRVCAS Trigger: GGAGGCGCAGACTCGTCTCCAAGGCCAGCGCCATGG...AGTCACAAGGATGAATATCAATGGCCAATGGGAAGGCGAGGTGAATGGGCGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231629.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGCAGGGACAGCACAGCAATCACTCGTTGTCATCGGGGTTCTGAGGGTCAAAACAAGGCCGGCAAATaGTCAAACTCCTGGTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSRDSTAITRCHRGSEGQNKAGK*SNSWSP Trigger: CGGGGACCAGGAGTTTGACCATTTGCCGGCCTTGTT...TTGACCCTCAGAACCCCGATGACAACGAGTGATTGCTGTGCTGTCCCTGCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000231629.2 |
||
| 3UTR CAA 72 bp | CCTCACCGTCTCCATGCAGACCATCAGCAGGCTTGCTaGCTCTCTCTGTCAGCCTCCAGTACAAACAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PHRLHADHQQAC*LSLSASSTNKA Trigger: TGCCTTGTTTGTACTGGAGGCTGACAGAGAGAGCAAGCAAGCCTGCTGATGGTCTGCATGGAGACGGTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| CDS-3UTR CCA 90 bp | ACAGCTGTAGAGGAAGGCTGGCACAGTGCCAGGATCGTGCAACTTGAAAAGAGGAACAAGGCCGGCAAATaGTCAAACTCCTGGTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TAVEEGWHSARIVQLEKRNKAGK*SNSWSP Trigger: CGGGGACCAGGAGTTTGACCATTTGCCGGCCTTGTT...CCTCTTTTCAAGTTGCACGATCCTGGCACTGTGCCAGCCTTCCTCTACAGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR CAA 72 bp | CAAGCCTCACCGTCTCCATGCAGACCATCAGCAGGCTaGCTTGCTCTCTCTGTCAGCCTCCAGTACAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: QASPSPCRPSAG*LALSVSLQYKQ Trigger: TTGTTTGTACTGGAGGCTGACAGAGAGAGCAAGCAAGCCTGCTGATGGTCTGCATGGAGACGGTGAGGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| 3UTR CAA 72 bp | GGTTACAAGAGCAGTGGCCATCAGTCTTGGCCCATCTaGTCTGTAAACAGCTGTAGAGGAAGGCTGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GYKSSGHQSWPI*SVNSCRGRLAQ Trigger: CTGTGCCAGCCTTCCTCTACAGCTGTTTACAGACAAGATGGGCCAAGACTGATGGCCACTGCTCTTGTAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
||
| CDS-3UTR GCA 90 bp | AATCAGCTACTCTTTGACAGCATGACTATGATACAAATGCCGAGCCAGCGAGCACCCGGACTAGGAACATaGCATGGCGCTGGCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NQLLFDSMTMIQMPSQRAPGLGT*HGAGLG Trigger: TCCAAGGCCAGCGCCATGGCATGTTCCTAGTCCGGG...TGCTCGCTGGCTCGGCATTTGTATCATAGTCATGCTGTCAAAGAGTAGCTGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006293.5 ENSMUST00000231629.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGAGCTGCTCTGGGTTCCAGTCTCTACTGTGTGCTTCCACCAGTGTTTCCATCCATTCTGTGTGGATaGCAAAGGGTTGATCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GRAALGSSLYCVLPPVFPSILCG*QRVDRC Trigger: GCAGCGATCAACCCTTTGCCATCCACACAGAATGGA...TGGAAACACTGGTGGAAGCACACAGTAGAGACTGGAACCCAGAGCAGCTCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| CDS-3UTR TCA 90 bp | CAGTCTCTACTGTGTGCTTCCACCAGTGTTTCCAGTTCACAATCCACAAGAACTTGGATGGCAAAGGGTTaGTCGCTGCCCCAGGAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QSLLCASTSVSSSQSTRTWMAKG*SLPQEY Trigger: GTACTCCTGGGGCAGCGATCAACCCTTTGCCATCCA...AGTTCTTGTGGATTGTGAACTGGAAACACTGGTGGAAGCACACAGTAGAGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| CDS-3UTR CCA 90 bp | GCCTCCAGTACAAACAAGGCAGTGATGGATGGGAAGGAAGAGCTGCTCTGGGTTAAATGGTCAAACTCCTaGTCCCCGATCTTAAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ASSTNKAVMDGKEELLWVKWSNS*SPILKR Trigger: CCGCTTTAAGATCGGGGACCAGGAGTTTGACCATTT...AACCCAGAGCAGCTCTTCCTTCCCATCCATCACTGCCTTGTTTGTACTGGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006293.5 ENSMUST00000231629.2 |
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| CDS-3UTR CCA 90 bp | CAGTTAACCAGGGAGGGGTTCACTGGTTCCAGAGTGAGGAGTCCACAGAAAGCACGCATGAGCAGGTTCTaGGATGCCATAACTGTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: QLTREGFTGSRVRSPQKARMSRF*DAITVR Trigger: TCTAACAGTTATGGCATCCCAGAACCTGCTCATGCG...TGCTTTCTGTGGACTCCTCACTCTGGAACCAGTGAACCCCTCCCTGGTTAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR CAA 72 bp | CCCCTGAAACCAAGGGTCTTCCCAGAAGAGTGGGACTaGGGGAAGATGCTGCTTTCTATCAGTGAGAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PLKPRVFPEEWD*GKMLLSISERD Trigger: ATCTCTCTCACTGATAGAAAGCAGCATCTTCCCCAAGTCCCACTCTTCTGGGAAGACCCTTGGTTTCAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| CDS-3UTR CCA 90 bp | CTGCTCTGGGTTCCAGTCTCTACTGTGTGCTTCCACCAGTGTTTCCAGTTCACATCCATGCTTTCCATGTaGCGAAGACCTCACAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLWVPVSTVCFHQCFQFTSMLSM*RRPHKL Trigger: AAGCTTGTGAGGTCTTCGCCACATGGAAAGCATGGA...TGTGAACTGGAAACACTGGTGGAAGCACACAGTAGAGACTGGAACCCAGAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR CAA 72 bp | TGGGGCTCAAGAAATGGCTCAGTGGTTAAGGTCTTCTaGCAGAGGACCCAGGTTCAATTCCTAGAACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: WGSRNGSVVKVF*QRTQVQFLEPT Trigger: TGTGGGTTCTAGGAATTGAACCTGGGTCCTCTGCAAGAAGACCTTAACCACTGAGCCATTTCTTGAGCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| CDS-3UTR GCA 90 bp | AGTGTTTCCAGTTCACAATCCACAAGAACTCTAAATCAGCTACTCTTTGACAGCCCCGGACTAGGAACATaGCATGGCGCTGGCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SVSSSQSTRTLNQLLFDSPGLGT*HGAGLG Trigger: TCCAAGGCCAGCGCCATGGCATGTTCCTAGTCCGGG...GCTGTCAAAGAGTAGCTGATTTAGAGTTCTTGTGGATTGTGAACTGGAAACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006293.5 ENSMUST00000231629.2 |
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| CDS-3UTR GCA 90 bp | TCTGGGTTCCAGTCTCTACTGTGTGCTTCCACCAGTGTTTCCAGTTCACAATCCGTCACCAACCTCCAATaGCAAGGCAGTCTTGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: SGFQSLLCASTSVSSSQSVTNLQ*QGSLVI Trigger: TATGACAAGACTGCCTTGGCATTGGAGGTTGGTGAC...GGATTGTGAACTGGAAACACTGGTGGAAGCACACAGTAGAGACTGGAACCCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR CAA 72 bp | ACAGCAAGGTACACCATGACTGCTGCTGTGCACTGTTaGCCACATGGTAAACAAGGTACTGTGGCAACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TARYTMTAAVHC*PHGKQGTVATK Trigger: TTTGGTTGCCACAGTACCTTGTTTACCATGTGGCAAACAGTGCACAGCAGCAGTCATGGTGTACCTTGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| CDS-3UTR CCA 90 bp | GGAAGAGCTGCTCTGGGTTCCAGTCTCTACTGTGTGCTTCCACCAGTGTTTCCACAAGGTACTCTCTTCTaGATTGCTTTTGCAAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GRAALGSSLYCVLPPVFPQGTLF*IAFAKT Trigger: TGTCTTTGCAAAAGCAATCCAGAAGAGAGTACCTTG...TGGAAACACTGGTGGAAGCACACAGTAGAGACTGGAACCCAGAGCAGCTCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| CDS-3UTR CCA 90 bp | TCTGGGTTCCAGTCTCTACTGTGTGCTTCCACCAGTGTTTCCAGTTCACAATCCACCTCGCCTTCCCATTaGCCATTGATATTCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGFQSLLCASTSVSSSQSTSPSH*PLIFIL Trigger: AAGGATGAATATCAATGGCCAATGGGAAGGCGAGGT...GGATTGTGAACTGGAAACACTGGTGGAAGCACACAGTAGAGACTGGAACCCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| CDS-3UTR GCA 90 bp | GTTTCCAGTTCACAATCCACAAGAACTCTAAATCAGCTACTCTTTGACAGCATGCAAAGGGTTGATCGCTaGCCCAGGAGTACTGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VSSSQSTRTLNQLLFDSMQRVDR*PRSTGN Trigger: GTTGCCAGTACTCCTGGGGCAGCGATCAACCCTTTG...CATGCTGTCAAAGAGTAGCTGATTTAGAGTTCTTGTGGATTGTGAACTGGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| CDS-3UTR GCA 90 bp | GTTCCAGAGGATCCAACCAACACCCTTTTCTGGCCTCCTAACAAACTACCCATGCTTCTGGATTGCTTTTaGAAAGACAGGTCCATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VPEDPTNTLFWPPNKLPMLLDCF*KDRSIL Trigger: CAGAATGGACCTGTCTTTGCAAAAGCAATCCAGAAG...CATGGGTAGTTTGTTAGGAGGCCAGAAAAGGGTGTTGGTTGGATCCTCTGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR CAA 72 bp | AAGGAAAAATGGCTCATGATCGAGGGGCGTCTTCTTTaGCTCAGAAGCACTGTATTCTGGTTCTACTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KEKWLMIEGRLL*LRSTVFWFYSG Trigger: GCCTGAGTAGAACCAGAATACAGTGCTTCTGAGCAAAAGAAGACGCCCCTCGATCATGAGCCATTTTTCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| CDS-3UTR GCA 90 bp | TTGCTCAGAAGCACTGTATTCTGGTTCTACTCAGGCTGTGGAACCAGAACAGACGAATTCCTATTTCCATaGTTTCCATGTGGCGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLRSTVFWFYSGCGTRTDEFLFP*FPCGED Trigger: GTCTTCGCCACATGGAAAGCATGGAAATAGGAATTC...GTCTGTTCTGGTTCCACAGCCTGAGTAGAACCAGAATACAGTGCTTCTGAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR CAA 72 bp | ATGGGACATTCTGATCATGAAGTATTCCTTAGAGTCTaGCTGGTCAACAGTCTTGGGAAAAGGGAAACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MGHSDHEVFLRV*LVNSLGKRETL Trigger: CAGGGTTTCCCTTTTCCCAAGACTGTTGACCAGCAAGACTCTAAGGAATACTTCATGATCAGAATGTCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR CAA 72 bp | ACCTTTATAATTTCAGCTGAGGCTGGGATGGAAATCTaGAAGCCAGCATGGGCAATTTATAGAGATCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: TFIISAEAGMEI*KPAWAIYRDPI Trigger: GATGGGATCTCTATAAATTGCCCATGCTGGCTTCAAGATTTCCATCCCAGCCTCAGCTGAAATTATAAAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| 3UTR CAA 72 bp | AGAAATAAATATAGTGGACAAAGGGTTTTGTTGGTTTaGTCACCTGAATATGTTCCATTAGTTCTCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RNKYSGQRVLLV*SPEYVPLVLKA Trigger: GGCTTTGAGAACTAATGGAACATATTCAGGTGACAAAACCAACAAAACCCTTTGTCCACTATATTTATTTCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| CDS CCA 90 bp | CCGGGGCAGGTAGATGAGTCCCGGACTAGGAACATGCCATGGCGCTaGCCTTGGAGACGAGTCTGCGCCTCCTGGCGAGTCACTGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PGQVDESRTRNMPWR*PWRRVCASWRVTGP Trigger: GGGGCCAGTGACTCGCCAGGAGGCGCAGACTCGTCTCCAAGGCCAGCGCCATGGCATGTTCCTAGTCCGGGACTCATCTACCTGCCCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006293.5 ENSMUST00000231228.2 ENSMUST00000231629.2 |
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| CDS GCA 90 bp | TCCCGGACTAGGAACATGCCATGGCGCTGGCCTTGGAGACGAGTCTaGGCCTCCTGGCGAGTCACTGGCCCCATGTACCAGGCAGAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SRTRNMPWRWPWRRV*ASWRVTGPMYQAER Trigger: CCGCTCTGCCTGGTACATGGGGCCAGTGACTCGCCAGGAGGCGCAGACTCGTCTCCAAGGCCAGCGCCATGGCATGTTCCTAGTCCGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006293.5 ENSMUST00000231228.2 ENSMUST00000231629.2 |
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| CDS CCA 90 bp | AGGAACATGCCATGGCGCTGGCCTTGGAGACGAGTCTGCGCCTCCTaGCGAGTCACTGGCCCCATGTACCAGGCAGAGCGGTCTGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RNMPWRWPWRRVCAS*RVTGPMYQAERSEE Trigger: TTCTTCAGACCGCTCTGCCTGGTACATGGGGCCAGTGACTCGCCAGGAGGCGCAGACTCGTCTCCAAGGCCAGCGCCATGGCATGTTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006293.5 ENSMUST00000231228.2 ENSMUST00000231629.2 |
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| CDS CCA 90 bp | CAGGTAGATGAGTCCCGGACTAGGAACATGCCATGGCGCTGGCCTTaGAGACGAGTCTGCGCCTCCTGGCGAGTCACTGGCCCCATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: QVDESRTRNMPWRWP*RRVCASWRVTGPMY Trigger: GTACATGGGGCCAGTGACTCGCCAGGAGGCGCAGACTCGTCTCCAAGGCCAGCGCCATGGCATGTTCCTAGTCCGGGACTCATCTACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006293.5 ENSMUST00000231228.2 ENSMUST00000231629.2 |
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| CDS-3UTR CAA 90 bp | GTCAGCCTCCAGTACAAACAAGGCAGTGATGGATGGGAAGGAAGAGCTGCTCTGACCCGGCCGTCCTTGTaGCGGGCACTCCACCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: VSLQYKQGSDGWEGRAALTRPSL*RALHHC Trigger: GCAGTGGTGGAGTGCCCGCAACAAGGACGGCCGGGT...CAGAGCAGCTCTTCCTTCCCATCCATCACTGCCTTGTTTGTACTGGAGGCTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| CDS-3UTR CAA 90 bp | GTCAGCCTCCAGTACAAACAAGGCAGTGATGGATGGGAAGGAAGAGCTGCTCTGCCAACCCGGCCGTCCTaGTTGCGGGCACTCCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: VSLQYKQGSDGWEGRAALPTRPS*LRALHH Trigger: GTGGTGGAGTGCCCGCAACAAGGACGGCCGGGTTGG...CAGAGCAGCTCTTCCTTCCCATCCATCACTGCCTTGTTTGTACTGGAGGCTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| CDS-3UTR CAA 90 bp | CTGCTCTGGGTTCCAGTCTCTACTGTGTGCTTCCACCAGTGTTTCCAGTTCACAGCCATGGCGCTGGCCTaGGAGACGAGTCTGCGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLWVPVSTVCFHQCFQFTAMALA*ETSLRL Trigger: GAGGCGCAGACTCGTCTCCAAGGCCAGCGCCATGGC...TGTGAACTGGAAACACTGGTGGAAGCACACAGTAGAGACTGGAACCCAGAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006293.5 ENSMUST00000231629.2 |
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| CDS-3UTR CAA 90 bp | GTCTGCTACGTTCGTTCTGTGTGGAGGTGTATCCTCATCAGGGTCCAACTGAAAGCCATGGCGCTGGCCTaGGAGACGAGTCTGCGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VCYVRSVWRCILIRVQLKAMALA*ETSLRL Trigger: GAGGCGCAGACTCGTCTCCAAGGCCAGCGCCATGGC...TTTCAGTTGGACCCTGATGAGGATACACCTCCACACAGAACGAACGTAGCAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| CDS-3UTR CAA 90 bp | CAGCAGTTAACCAGGGAGGGGTTCACTGGTTCCAGAGTGAGGAGTCCACAGAAAATCTTAAAGCGGCGGTaGGGCAGGGAGTTGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: QQLTREGFTGSRVRSPQKILKRR*GRELMM Trigger: CATCATCAACTCCCTGCCCAACCGCCGCTTTAAGAT...TTTCTGTGGACTCCTCACTCTGGAACCAGTGAACCCCTCCCTGGTTAACTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| CDS-3UTR CAA 90 bp | GCATGTGACAGAGTGCTTCCCACTTCAAAGGAGACTGACAGGCAGAAGGAGGCAATCTTAAAGCGGCGGTaGGGCAGGGAGTTGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: ACDRVLPTSKETDRQKEAILKRR*GRELMM Trigger: CATCATCAACTCCCTGCCCAACCGCCGCTTTAAGAT...TGCCTCCTTCTGCCTGTCAGTCTCCTTTGAAGTGGGAAGCACTCTGTCACATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006293.5 ENSMUST00000231629.2 |
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| CDS-3UTR CAA 90 bp | GCTGCTCTGGGTTCCAGTCTCTACTGTGTGCTTCCACCAGTGTTTCCAGTTCACAGTTGTGGTCTGAGGTaGAGCATACGCATGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AALGSSLYCVLPPVFPVHSCGLR*SIRMSR Trigger: CCTGCTCATGCGTATGCTCAACCTCAGACCACAACT...GTGAACTGGAAACACTGGTGGAAGCACACAGTAGAGACTGGAACCCAGAGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| CDS GCA 90 bp | GGAATCATCCCAACCCGGCCGTCCTTGTTGCGGGCACTCCACCACTaGTCTTCAGGCTTTTCTATTATCACTAGAAGCTCGCCCTTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: GIIPTRPSLLRALHH*SSGFSIITRSSPFL Trigger: TAAAAAGGGCGAGCTTCTAGTGATAATAGAAAAGCCTGAAGAGCAGTGGTGGAGTGCCCGCAACAAGGACGGCCGGGTTGGGATGATTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| CDS-3UTR CAA 90 bp | CTGCTCTGGGTTCCAGTCTCTACTGTGTGCTTCCACCAGTGTTTCCAGTTCACACACCTCGCCTTCCCATaGGCCATTGATATTCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLWVPVSTVCFHQCFQFTHLAFP*AIDIHP Trigger: AGGATGAATATCAATGGCCAATGGGAAGGCGAGGTG...TGTGAACTGGAAACACTGGTGGAAGCACACAGTAGAGACTGGAACCCAGAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| CDS-3UTR CAA 90 bp | GCATGTGACAGAGTGCTTCCCACTTCAAAGGAGACTGACAGGCAGAAGGAGGCAGTACTCTCTTCTGGATaGCTTTTGCAAAGACAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ACDRVLPTSKETDRQKEAVLSSG*LLQRQV Trigger: GACCTGTCTTTGCAAAAGCAATCCAGAAGAGAGTAC...TGCCTCCTTCTGCCTGTCAGTCTCCTTTGAAGTGGGAAGCACTCTGTCACATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| CDS-3UTR CAA 90 bp | TTGGGAAAAGGGAAACCCTGTTCTCAAAAATGGCTGTTTATGCTAAGCAAGGTGGTGGATGGCAAAGGGTaGATCGCTGCCCCAGGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: LGKGKPCSQKWLFMLSKVVDGKG*IAAPGV Trigger: TACTCCTGGGGCAGCGATCAACCCTTTGCCATCCAC...CACCTTGCTTAGCATAAACAGCCATTTTTGAGAACAGGGTTTCCCTTTTCCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| CDS GCA 90 bp | TGCCAAGGCAGTCTTGTCATAAGCACAAGGTACTCTCTTCTGGATTaGTTTTGCAAAGACAGGTCCATTCTGTGTGGATGGCAAAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: CQGSLVISTRYSLLD*FCKDRSILCGWQRV Trigger: AACCCTTTGCCATCCACACAGAATGGACCTGTCTTTGCAAAAGCAATCCAGAAGAGAGTACCTTGTGCTTATGACAAGACTGCCTTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| CDS-3UTR CAA 90 bp | AGTGTTTCCAGTTCACAATCCACAAGAACTCTAAATCAGCTACTCTTTGACAGCTCTGCTGTAGGTAAGTaGGGTGCTGAGACAGAACCC | + |
|
Preference number: 5 (lower is better) Translates to: SVSSSQSTRTLNQLLFDSSAVGK*GAETEP Trigger: GGGTTCTGTCTCAGCACCCAACTTACCTACAGCAGA...GCTGTCAAAGAGTAGCTGATTTAGAGTTCTTGTGGATTGTGAACTGGAAACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| CDS CCA 90 bp | TGGGATGCCATAACTGTTAGAATTCCTATTTCCATGCTTTCCATGTaGCGAAGACCTCACAAGCTTTTCAACGTAAGGGACAGGAATCAT | + |
|
Preference number: 5 (lower is better) Translates to: WDAITVRIPISMLSM*RRPHKLFNVRDRNH Trigger: ATGATTCCTGTCCCTTACGTTGAAAAGCTTGTGAGGTCTTCGCCACATGGAAAGCATGGAAATAGGAATTCTAACAGTTATGGCATCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| CDS CCA 72 bp | CCATGGCGCTGGCCTTGGAGACGAGTCTGCGCCTCCTaGCGAGTCACTGGCCCCATGTACCAGGCAGAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PWRWPWRRVCAS*RVTGPMYQAER Trigger: CCGCTCTGCCTGGTACATGGGGCCAGTGACTCGCCAGGAGGCGCAGACTCGTCTCCAAGGCCAGCGCCATGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006293.5 ENSMUST00000231228.2 ENSMUST00000231629.2 |
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| CDS CCA 72 bp | GAGTCCCGGACTAGGAACATGCCATGGCGCTGGCCTTaGAGACGAGTCTGCGCCTCCTGGCGAGTCACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ESRTRNMPWRWP*RRVCASWRVTG Trigger: GCCAGTGACTCGCCAGGAGGCGCAGACTCGTCTCCAAGGCCAGCGCCATGGCATGTTCCTAGTCCGGGACTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006293.5 ENSMUST00000231228.2 ENSMUST00000231629.2 |
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| CDS GCA 72 bp | AGGAACATGCCATGGCGCTGGCCTTGGAGACGAGTCTaGGCCTCCTGGCGAGTCACTGGCCCCATGTACCAG | + |
|
Preference number: 6 (lower is better) Translates to: RNMPWRWPWRRV*ASWRVTGPMYQ Trigger: CTGGTACATGGGGCCAGTGACTCGCCAGGAGGCGCAGACTCGTCTCCAAGGCCAGCGCCATGGCATGTTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006293.5 ENSMUST00000231228.2 ENSMUST00000231629.2 |
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| CDS CCA 72 bp | GGGCAGGTAGATGAGTCCCGGACTAGGAACATGCCATaGCGCTGGCCTTGGAGACGAGTCTGCGCCTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GQVDESRTRNMP*RWPWRRVCASW Trigger: CCAGGAGGCGCAGACTCGTCTCCAAGGCCAGCGCCATGGCATGTTCCTAGTCCGGGACTCATCTACCTGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006293.5 ENSMUST00000231228.2 ENSMUST00000231629.2 |
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| CDS CCA 72 bp | GTAGATGAGTCCCGGACTAGGAACATGCCATGGCGCTaGCCTTGGAGACGAGTCTGCGCCTCCTGGCGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: VDESRTRNMPWR*PWRRVCASWRV Trigger: GACTCGCCAGGAGGCGCAGACTCGTCTCCAAGGCCAGCGCCATGGCATGTTCCTAGTCCGGGACTCATCTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006293.5 ENSMUST00000231228.2 ENSMUST00000231629.2 |
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| CDS GCA 72 bp | CCAACCCGGCCGTCCTTGTTGCGGGCACTCCACCACTaGTCTTCAGGCTTTTCTATTATCACTAGAAGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: PTRPSLLRALHH*SSGFSIITRSS Trigger: CGAGCTTCTAGTGATAATAGAAAAGCCTGAAGAGCAGTGGTGGAGTGCCCGCAACAAGGACGGCCGGGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| CDS CAA 72 bp | GCAAAGACAGGTCCATTCTGTGTGGATGGCAAAGGGTaGATCGCTGCCCCAGGAGTACTGGCAACTGTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: AKTGPFCVDGKG*IAAPGVLATVG Trigger: ACCTACAGTTGCCAGTACTCCTGGGGCAGCGATCAACCCTTTGCCATCCACACAGAATGGACCTGTCTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| CDS CAA 90 bp | ATTGCTTTTGCAAAGACAGGTCCATTCTGTGTGGATGGCAAAGGGTaGATCGCTGCCCCAGGAGTACTGGCAACTGTAGGTAGAGGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: IAFAKTGPFCVDGKG*IAAPGVLATVGRGV Trigger: AACTCCTCTACCTACAGTTGCCAGTACTCCTGGGGCAGCGATCAACCCTTTGCCATCCACACAGAATGGACCTGTCTTTGCAAAAGCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| CDS CAA 90 bp | GGGAAAAGCCCCTTGCGCCCATTCACCTCGCCTTCCCATTGGCCATaGATATTCATCCTTGTGACTTTCACAATGTCACCAACCTCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: GKSPLRPFTSPSHWP*IFILVTFTMSPTSN Trigger: ATTGGAGGTTGGTGACATTGTGAAAGTCACAAGGATGAATATCAATGGCCAATGGGAAGGCGAGGTGAATGGGCGCAAGGGGCTTTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| CDS CAA 72 bp | GAAAAGCCCCTTGCGCCCATTCACCTCGCCTTCCCATaGGCCATTGATATTCATCCTTGTGACTTTCACAAT | + |
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Preference number: 6 (lower is better) Translates to: EKPLAPIHLAFP*AIDIHPCDFHN Trigger: ATTGTGAAAGTCACAAGGATGAATATCAATGGCCAATGGGAAGGCGAGGTGAATGGGCGCAAGGGGCTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| CDS CAA 90 bp | ATGCCAAGGCAGTCTTGTCATAAGCACAAGGTACTCTCTTCTGGATaGCTTTTGCAAAGACAGGTCCATTCTGTGTGGATGGCAAAGGGT | + |
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Preference number: 6 (lower is better) Translates to: MPRQSCHKHKVLSSG*LLQRQVHSVWMAKG Trigger: ACCCTTTGCCATCCACACAGAATGGACCTGTCTTTGCAAAAGCAATCCAGAAGAGAGTACCTTGTGCTTATGACAAGACTGCCTTGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| CDS CCA 72 bp | TGTGGTCTGAGGTTGAGCATACGCATGAGCAGGTTCTaGGATGCCATAACTGTTAGAATTCCTATTTCCATG | + |
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Preference number: 6 (lower is better) Translates to: CGLRLSIRMSRF*DAITVRIPISM Trigger: CATGGAAATAGGAATTCTAACAGTTATGGCATCCCAGAACCTGCTCATGCGTATGCTCAACCTCAGACCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| CDS CAA 72 bp | CAGTCTTGTCATAAGCACAAGGTACTCTCTTCTGGATaGCTTTTGCAAAGACAGGTCCATTCTGTGTGGATG | + |
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Preference number: 6 (lower is better) Translates to: QSCHKHKVLSSG*LLQRQVHSVWM Trigger: CATCCACACAGAATGGACCTGTCTTTGCAAAAGCAATCCAGAAGAGAGTACCTTGTGCTTATGACAAGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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| CDS CCA 72 bp | ATAACTGTTAGAATTCCTATTTCCATGCTTTCCATGTaGCGAAGACCTCACAAGCTTTTCAACGTAAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: ITVRIPISMLSM*RRPHKLFNVRD Trigger: GTCCCTTACGTTGAAAAGCTTGTGAGGTCTTCGCCACATGGAAAGCATGGAAATAGGAATTCTAACAGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006293.5 |
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