Pregenerated sensors for CRISPLD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031825Ensembl transcript IDs: ENSMUST00000034282.16, ENSMUST00000108972.4, ENSMUST00000132583.8
Found 277 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | ACCACCAAAGAAAACATGGCAAGGAGTGTCTCAGTGAGCAGCTCCTaGGAGGAGGTGAGCCACCAGATGGGGACCGCCACCTGGCCAGCC | + |
Preference number: 1 (lower is better) Translates to: TTKENMARSVSVSSS*EEVSHQMGTATWPA Trigger: GGCTGGCCAGGTGGCGGTCCCCATCTGGTGGCTCACCTCCTCTCAGGAGCTGCTCACTGAGACACTCCTTGCCATGTTTTCTTTGGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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3UTR GCA 90 bp | TCTAGAAACCCAGAAGGGGTATGGTTTTCCTTACCACGTCAGCCTTaGCCTGCTGGCTTGGTGAAGGGTCCTACGGCAGCACTCCTTGTA | + |
Preference number: 1 (lower is better) Translates to: SRNPEGVWFSLPRQP*PAGLVKGPTAALLV Trigger: TACAAGGAGTGCTGCCGTAGGACCCTTCACCAAGCCAGCAGGGCAAGGCTGACGTGGTAAGGAAAACCATACCCCTTCTGGGTTTCTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR GCA 90 bp | ACTATTGATGAAGGTGATCGATCGAGGCTGCTAGGCCAGGCTCTGTaGCTGATGGAAGGGCAGCCAGGGAACTCAGAGAACCTCAGTACA | + |
Preference number: 1 (lower is better) Translates to: TIDEGDRSRLLGQAL*LMEGQPGNSENLST Trigger: TGTACTGAGGTTCTCTGAGTTCCCTGGCTGCCCTTCCATCAGGCACAGAGCCTGGCCTAGCAGCCTCGATCGATCACCTTCATCAATAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR CCA 90 bp | GTCCCCTTCCACAGACTGCGCAGATGTCTGCTCCAACATCTGGAGTaGAAGAGTTTATGCCCTCAAAGACACCACACCCACACCCATGAG | + |
Preference number: 1 (lower is better) Translates to: VPFHRLRRCLLQHLE*KSLCPQRHHTHTHE Trigger: CTCATGGGTGTGGGTGTGGTGTCTTTGAGGGCATAAACTCTTCCACTCCAGATGTTGGAGCAGACATCTGCGCAGTCTGTGGAAGGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR TCA 90 bp | ATGTGTGTGGTGCCTGTGGAGACCAGAGATCTCTTGAACGGCCTGTaGATAGTGAGAACTGAGCGCAGGTCCTCCGGTAGAGCAACAAGA | + |
Preference number: 1 (lower is better) Translates to: MCVVPVETRDLLNGL*IVRTERRSSGRATR Trigger: TCTTGTTGCTCTACCGGAGGACCTGCGCTCAGTTCTCACTATTCACAGGCCGTTCAAGAGATCTCTGGTCTCCACAGGCACCACACACAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR TCA 90 bp | CCTTATAGCTGTCGACTCTTGTCACCCAGACAAGAGCCCCATTCATaGCATATCTCAAACCTGTATCCTCAGGGTTCGAAAGCCTTCCCC | + |
Preference number: 1 (lower is better) Translates to: PYSCRLLSPRQEPHS*HISNLYPQGSKAFP Trigger: GGGGAAGGCTTTCGAACCCTGAGGATACAGGTTTGAGATATGTCATGAATGGGGCTCTTGTCTGGGTGACAAGAGTCGACAGCTATAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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3UTR TCA 90 bp | TTTAAGGAAGAGCTGATGGATGGACACACAGGGTCAGAAGGGCTCTaGTGTAAGGTCTTGTCATTTGTGGTTTTGTTTCCTCCAGTTTCA | + |
Preference number: 1 (lower is better) Translates to: FKEELMDGHTGSEGL*CKVLSFVVLFPPVS Trigger: TGAAACTGGAGGAAACAAAACCACAAATGACAAGACCTTACATCAGAGCCCTTCTGACCCTGTGTGTCCATCCATCAGCTCTTCCTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR-3UTR CCA 90 bp | CTCCTAAGTGATGGGAGCCAGGGCTCACCACACTCTTGGAGCCTGGGGATGCTGGGCCCCTCTTTCTGGTaGCTGGTGTGTCATGGGTGG | + |
Preference number: 2 (lower is better) Translates to: LLSDGSQGSPHSWSLGMLGPSFW*LVCHGW Trigger: CCACCCATGACACACCAGCCACCAGAAAGAGGGGCC...CAGCATCCCCAGGCTCCAAGAGTGTGGTGAGCCCTGGCTCCCATCACTTAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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3UTR-3UTR TCA 90 bp | CCACCAGGGCAGAGCCCAGGTCTTGCTCGGGGCTTCTCCCTGCAGCCCATCTGTGCCCAGGACGTTCAATaGCACCAAAAGGAAGATTCC | + |
Preference number: 2 (lower is better) Translates to: PPGQSPGLARGFSLQPICAQDVQ*HQKEDS Trigger: GGAATCTTCCTTTTGGTGTCATTGAACGTCCTGGGC...ACAGATGGGCTGCAGGGAGAAGCCCCGAGCAAGACCTGGGCTCTGCCCTGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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3UTR-3UTR TCA 90 bp | ACCGCCACCTGGCCAGCCTGGGCACTGGTTGTCCAGCCAAGAGACTCCACGGCAGCCCAGGACGTTCAATaGCACCAAAAGGAAGATTCC | + |
Preference number: 2 (lower is better) Translates to: TATWPAWALVVQPRDSTAAQDVQ*HQKEDS Trigger: GGAATCTTCCTTTTGGTGTCATTGAACGTCCTGGGC...TGCCGTGGAGTCTCTTGGCTGGACAACCAGTGCCCAGGCTGGCCAGGTGGCGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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3UTR-3UTR TCA 90 bp | CTGTATCCTCAGGGTTCGAAAGCCTTCCCCCTCCACCACCAAAGAAAACATGGCGCTCCTGAGAGGAGGTaGGCCACCAGATGGGGACCG | + |
Preference number: 2 (lower is better) Translates to: LYPQGSKAFPLHHQRKHGAPERR*ATRWGP Trigger: CGGTCCCCATCTGGTGGCTCACCTCCTCTCAGGAGC...GCCATGTTTTCTTTGGTGGTGGAGGGGGAAGGCTTTCGAACCCTGAGGATACAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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3UTR-3UTR TCA 90 bp | CACCGGCAATCTGCCCCATGCTCAGGACTGGGGTGGGATTCCACCTTCTCTAGAGATGCTGGCAGGCACTaGGGGGTTCTTCCTGTGTGT | + |
Preference number: 2 (lower is better) Translates to: HRQSAPCSGLGWDSTFSRDAGRH*GVLPVC Trigger: ACACACAGGAAGAACCCCTCAGTGCCTGCCAGCATC...TCTAGAGAAGGTGGAATCCCACCCCAGTCCTGAGCATGGGGCAGATTGCCGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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3UTR-3UTR CCA 90 bp | CTCCTAAGTGATGGGAGCCAGGGCTCACCACACTCTTGGAGCCTGGGGATGCTGCCTCACCAAAGGCCATaGAGGCCCAGGACGTTCAAT | + |
Preference number: 2 (lower is better) Translates to: LLSDGSQGSPHSWSLGMLPHQRP*RPRTFN Trigger: ATTGAACGTCCTGGGCCTCCATGGCCTTTGGTGAGG...CAGCATCCCCAGGCTCCAAGAGTGTGGTGAGCCCTGGCTCCCATCACTTAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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3UTR-3UTR TCA 90 bp | CCCAGAAGGGGTATGGTTTTCCTTACCACGTCAGCCTTGCCCTGCTGGCTTGGTCCACACCCACACCCATaGGGCAGAAACAGCCTAGTG | + |
Preference number: 2 (lower is better) Translates to: PRRGMVFLTTSALPCWLGPHPHP*GRNSLV Trigger: CACTAGGCTGTTTCTGCCTCATGGGTGTGGGTGTGG...ACCAAGCCAGCAGGGCAAGGCTGACGTGGTAAGGAAAACCATACCCCTTCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR-3UTR CCA 90 bp | CTTGCAAAGCCAAACCCCAGAGGAGGACACCTAGATCTGCTGAGGGTGGGGCAGCCTCACCAAAGGCCATaGAGGCCCAGGACGTTCAAT | + |
Preference number: 2 (lower is better) Translates to: LAKPNPRGGHLDLLRVGQPHQRP*RPRTFN Trigger: ATTGAACGTCCTGGGCCTCCATGGCCTTTGGTGAGG...CTGCCCCACCCTCAGCAGATCTAGGTGTCCTCCTCTGGGGTTTGGCTTTGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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3UTR-3UTR TCA 90 bp | ATGGTAGGGAAGGCTCCTGATGTATTGGTCCTCCATGAGACCAAAGGTCATGTGGCTCCTGAGAGGAGGTaGGCCACCAGATGGGGACCG | + |
Preference number: 2 (lower is better) Translates to: MVGKAPDVLVLHETKGHVAPERR*ATRWGP Trigger: CGGTCCCCATCTGGTGGCTCACCTCCTCTCAGGAGC...CACATGACCTTTGGTCTCATGGAGGACCAATACATCAGGAGCCTTCCCTACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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3UTR CAA 90 bp | GGGTCCTACGGCAGCACTCCTTGTATCGGGAAGTTTCCCAGATGTTaGGTAGCAACCAGAGGTCCCCTTCCACAGACTGCGCAGATGTCT | + |
Preference number: 2 (lower is better) Translates to: GSYGSTPCIGKFPRC*VATRGPLPQTAQMS Trigger: AGACATCTGCGCAGTCTGTGGAAGGGGACCTCTGGTTGCTACCAAACATCTGGGAAACTTCCCGATACAAGGAGTGCTGCCGTAGGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR CAA 90 bp | GAAGGGGTATGGTTTTCCTTACCACGTCAGCCTTGCCCTGCTGGCTaGGTGAAGGGTCCTACGGCAGCACTCCTTGTATCGGGAAGTTTC | + |
Preference number: 2 (lower is better) Translates to: EGVWFSLPRQPCPAG*VKGPTAALLVSGSF Trigger: GAAACTTCCCGATACAAGGAGTGCTGCCGTAGGACCCTTCACCAAGCCAGCAGGGCAAGGCTGACGTGGTAAGGAAAACCATACCCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR-3UTR TCA 90 bp | ATAGACACCACCAGGGCAGAGCCCAGGTCTTGCTCGGGGCTTCTCCCTGCAGCCCAAGAGCCCCATTCATaGCATATCTCAAACCTGTAT | + |
Preference number: 2 (lower is better) Translates to: IDTTRAEPRSCSGLLPAAQEPHS*HISNLY Trigger: ATACAGGTTTGAGATATGTCATGAATGGGGCTCTTG...GGCTGCAGGGAGAAGCCCCGAGCAAGACCTGGGCTCTGCCCTGGTGGTGTCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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3UTR-3UTR TCA 90 bp | CACCGGCAATCTGCCCCATGCTCAGGACTGGGGTGGGATTCCACCTTCTCTAGAGGACTTATAAGCACGTaGCTGCCAAAAAGGTTGGGG | + |
Preference number: 2 (lower is better) Translates to: HRQSAPCSGLGWDSTFSRGLIST*LPKRLG Trigger: CCCCAACCTTTTTGGCAGTCACGTGCTTATAAGTCC...TCTAGAGAAGGTGGAATCCCACCCCAGTCCTGAGCATGGGGCAGATTGCCGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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3UTR-3UTR CCA 90 bp | CACCGGCAATCTGCCCCATGCTCAGGACTGGGGTGGGATTCCACCTTCTCTAGAGTGGCTGGTGTGTCATaGGTGGTTTTACAACCACAG | + |
Preference number: 2 (lower is better) Translates to: HRQSAPCSGLGWDSTFSRVAGVS*VVLQPQ Trigger: CTGTGGTTGTAAAACCACCCATGACACACCAGCCAC...TCTAGAGAAGGTGGAATCCCACCCCAGTCCTGAGCATGGGGCAGATTGCCGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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3UTR-3UTR TCA 90 bp | ATGGTAGGGAAGGCTCCTGATGTATTGGTCCTCCATGAGACCAAAGGTCATGTGTCAGTGAGCAGCTCCTaGGAGGAGGTGAGCCACCAG | + |
Preference number: 2 (lower is better) Translates to: MVGKAPDVLVLHETKGHVSVSSS*EEVSHQ Trigger: CTGGTGGCTCACCTCCTCTCAGGAGCTGCTCACTGA...CACATGACCTTTGGTCTCATGGAGGACCAATACATCAGGAGCCTTCCCTACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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3UTR-3UTR TCA 90 bp | CTTGCAAAGCCAAACCCCAGAGGAGGACACCTAGATCTGCTGAGGGTGGGGCAGAGACCAAAGGTCATGTaGGAAAAGGCCACACAGACA | + |
Preference number: 2 (lower is better) Translates to: LAKPNPRGGHLDLLRVGQRPKVM*EKATQT Trigger: TGTCTGTGTGGCCTTTTCTCACATGACCTTTGGTCT...CTGCCCCACCCTCAGCAGATCTAGGTGTCCTCCTCTGGGGTTTGGCTTTGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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3UTR-3UTR GCA 90 bp | ACAGAAGCATGCTTCATTTTACAGTGGGTTTGGACCAGGCTCCTAAGTGATGGGCTTGGAGCCTGGGGATaGTGGCAGGCACTGAGGGGT | + |
Preference number: 2 (lower is better) Translates to: TEACFILQWVWTRLLSDGLGAWG*WQALRG Trigger: ACCCCTCAGTGCCTGCCAGCATCCCCAGGCTCCAAG...CCCATCACTTAGGAGCCTGGTCCAAACCCACTGTAAAATGAAGCATGCTTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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3UTR-3UTR GCA 90 bp | CCCAGAAGGGGTATGGTTTTCCTTACCACGTCAGCCTTGCCCTGCTGGCTTGGTGAACCATTTGTACTTTaGTCCTGTGAATGTGTGTGG | + |
Preference number: 2 (lower is better) Translates to: PRRGMVFLTTSALPCWLGEPFVL*SCECVW Trigger: CCACACACATTCACAGGAGCAAAGTACAAATGGTTC...ACCAAGCCAGCAGGGCAAGGCTGACGTGGTAAGGAAAACCATACCCCTTCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR-3UTR CCA 90 bp | CCAGACAAGAGCCCCATTCATGACATATCTCAAACCTGTATCCTCAGGGTTCGACCTCACCAAAGGCCATaGAGGCCCAGGACGTTCAAT | + |
Preference number: 2 (lower is better) Translates to: PDKSPIHDISQTCILRVRPHQRP*RPRTFN Trigger: ATTGAACGTCCTGGGCCTCCATGGCCTTTGGTGAGG...TCGAACCCTGAGGATACAGGTTTGAGATATGTCATGAATGGGGCTCTTGTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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3UTR-3UTR CCA 90 bp | TCAAGGCCAGCCTGGACTACCATAGTGAAACTGTCTCAAACAAATAAACATTTAATGGGGACCGCCACCTaGCCAGCCTGGGCACTGGTT | + |
Preference number: 2 (lower is better) Translates to: SRPAWTTIVKLSQTNKHLMGTAT*PAWALV Trigger: AACCAGTGCCCAGGCTGGCCAGGTGGCGGTCCCCAT...TAAATGTTTATTTGTTTGAGACAGTTTCACTATGGTAGTCCAGGCTGGCCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR-3UTR TCA 90 bp | CACAGCTTAAAAACTAGGTCACCCAAACCAGGGGGAAGTGACGTTCAATTGTCAAAAGGTTGGGGAATGTaGGCACGGATAGACACCACC | + |
Preference number: 2 (lower is better) Translates to: HSLKTRSPKPGGSDVQLSKGWGM*ARIDTT Trigger: GGTGGTGTCTATCCGTGCTCACATTCCCCAACCTTT...TGACAATTGAACGTCACTTCCCCCTGGTTTGGGTGACCTAGTTTTTAAGCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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3UTR-3UTR CCA 90 bp | ACCGGCAATCTGCCCCATGCTCAGGACTGGGGTGGGATTCCACCTTCTCTAGAGGACAAGATAAATCTCTaGAGTGCTACCAACTTTAAA | + |
Preference number: 2 (lower is better) Translates to: TGNLPHAQDWGGIPPSLEDKINL*SATNFK Trigger: TTTAAAGTTGGTAGCACTCCAGAGATTTATCTTGTC...CTCTAGAGAAGGTGGAATCCCACCCCAGTCCTGAGCATGGGGCAGATTGCCGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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3UTR CAA 90 bp | AGAACCTCAGTACAGACTCACACAGCAAGTTCCCTGAAGATGGGATaGGCTGCTCATTCTAGAAACCCAGAAGGGGTATGGTTTTCCTTA | + |
Preference number: 2 (lower is better) Translates to: RTSVQTHTASSLKMG*AAHSRNPEGVWFSL Trigger: TAAGGAAAACCATACCCCTTCTGGGTTTCTAGAATGAGCAGCCAATCCCATCTTCAGGGAACTTGCTGTGTGAGTCTGTACTGAGGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR-3UTR TCA 90 bp | CAGAAGGGCTCTGATGTAAGGTCTTGTCATTTGTGGTTTTGTTTCCTCCAGTTTGGACTTATAAGCACGTaGCTGCCAAAAAGGTTGGGG | + |
Preference number: 2 (lower is better) Translates to: QKGSDVRSCHLWFCFLQFGLIST*LPKRLG Trigger: CCCCAACCTTTTTGGCAGTCACGTGCTTATAAGTCC...AAACTGGAGGAAACAAAACCACAAATGACAAGACCTTACATCAGAGCCCTTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR-3UTR TCA 90 bp | ATGAGGTCAAGGCCAGCCTGGACTACCATAGTGAAACTGTCTCAAACAAATAAATGTACTTTGCTCCTGTaGATGTGTGTGGTGCCTGTG | + |
Preference number: 2 (lower is better) Translates to: MRSRPAWTTIVKLSQTNKCTLLL*MCVVPV Trigger: CACAGGCACCACACACATTCACAGGAGCAAAGTACA...TTTATTTGTTTGAGACAGTTTCACTATGGTAGTCCAGGCTGGCCTTGACCTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR-3UTR TCA 90 bp | ACAACCAGTGTGGCCCTGTTCATGCGAAGCACAAAAACTTACAATAAACTTTTGACACAGCAAGTTCCCTaGAGATGGGATTGGCTGCTC | + |
Preference number: 2 (lower is better) Translates to: TTSVALFMRSTKTYNKLLTQQVP*RWDWLL Trigger: GAGCAGCCAATCCCATCTTCAGGGAACTTGCTGTGT...CAAAAGTTTATTGTAAGTTTTTGTGCTTCGCATGAACAGGGCCACACTGGTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR-3UTR CCA 90 bp | GGTTTTGTTTCCTCCAGTTTCAAACTATTGATGAAGGTGATCGATCGAGGCTGCCCAGAAGGGGTGGATTaGGGAAAAGCTATCTTAGCA | + |
Preference number: 2 (lower is better) Translates to: GFVSSSFKLLMKVIDRGCPEGVD*GKAILA Trigger: TGCTAAGATAGCTTTTCCCCAATCCACCCCTTCTGG...GCAGCCTCGATCGATCACCTTCATCAATAGTTTGAAACTGGAGGAAACAAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR-3UTR CCA 90 bp | TCAAGGCCAGCCTGGACTACCATAGTGAAACTGTCTCAAACAAATAAACATTTACTGGTGTGTCATGGGTaGTTTTACAACCACAGGCCA | + |
Preference number: 2 (lower is better) Translates to: SRPAWTTIVKLSQTNKHLLVCHG*FYNHRP Trigger: TGGCCTGTGGTTGTAAAACCACCCATGACACACCAG...TAAATGTTTATTTGTTTGAGACAGTTTCACTATGGTAGTCCAGGCTGGCCTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR-3UTR CCA 90 bp | ACAACCAGTGTGGCCCTGTTCATGCGAAGCACAAAAACTTACAATAAACTTTTGAACCCAGAAGGGGTATaGTTTTCCTTACCACGTCAG | + |
Preference number: 2 (lower is better) Translates to: TTSVALFMRSTKTYNKLLNPEGV*FSLPRQ Trigger: CTGACGTGGTAAGGAAAACCATACCCCTTCTGGGTT...CAAAAGTTTATTGTAAGTTTTTGTGCTTCGCATGAACAGGGCCACACTGGTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR-3UTR GCA 90 bp | GGTTTTGTTTCCTCCAGTTTCAAACTATTGATGAAGGTGATCGATCGAGGCTGCCTGTTTACAGAAGCATaGTTCATTTTACAGTGGGTT | + |
Preference number: 2 (lower is better) Translates to: GFVSSSFKLLMKVIDRGCLFTEA*FILQWV Trigger: AACCCACTGTAAAATGAAGCATGCTTCTGTAAACAG...GCAGCCTCGATCGATCACCTTCATCAATAGTTTGAAACTGGAGGAAACAAAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR-3UTR CCA 90 bp | TCAAGGCCAGCCTGGACTACCATAGTGAAACTGTCTCAAACAAATAAACATTTAATTTTACAGTGGGTTTaGACCAGGCTCCTAAGTGAT | + |
Preference number: 2 (lower is better) Translates to: SRPAWTTIVKLSQTNKHLILQWV*TRLLSD Trigger: ATCACTTAGGAGCCTGGTCCAAACCCACTGTAAAAT...TAAATGTTTATTTGTTTGAGACAGTTTCACTATGGTAGTCCAGGCTGGCCTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR-3UTR CAA 90 bp | CTCCTAAGTGATGGGAGCCAGGGCTCACCACACTCTTGGAGCCTGGGGATGCTGGGCAGAGCCCAGGTCTaGCTCGGGGCTTCTCCCTGC | + |
Preference number: 3 (lower is better) Translates to: LLSDGSQGSPHSWSLGMLGRAQV*LGASPC Trigger: GCAGGGAGAAGCCCCGAGCAAGACCTGGGCTCTGCC...CAGCATCCCCAGGCTCCAAGAGTGTGGTGAGCCCTGGCTCCCATCACTTAGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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3UTR GCA 72 bp | GCACGGATAGACACCACCAGGGCAGAGCCCAGGTCTTaGTCGGGGCTTCTCCCTGCAGCCCATCTGTCTGAC | + |
Preference number: 3 (lower is better) Translates to: ARIDTTRAEPRS*SGLLPAAHLSD Trigger: GTCAGACAGATGGGCTGCAGGGAGAAGCCCCGAGCAAGACCTGGGCTCTGCCCTGGTGGTGTCTATCCGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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3UTR TCA 72 bp | GAAAACATGGCAAGGAGTGTCTCAGTGAGCAGCTCCTaGGAGGAGGTGAGCCACCAGATGGGGACCGCCACC | + |
Preference number: 3 (lower is better) Translates to: ENMARSVSVSSS*EEVSHQMGTAT Trigger: GGTGGCGGTCCCCATCTGGTGGCTCACCTCCTCTCAGGAGCTGCTCACTGAGACACTCCTTGCCATGTTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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3UTR GCA 72 bp | AGGGGTATGGTTTTCCTTACCACGTCAGCCTTGCCCTaGTGGCTTGGTGAAGGGTCCTACGGCAGCACTCCT | + |
Preference number: 3 (lower is better) Translates to: RGMVFLTTSALP*WLGEGSYGSTP Trigger: AGGAGTGCTGCCGTAGGACCCTTCACCAAGCCAGCAGGGCAAGGCTGACGTGGTAAGGAAAACCATACCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR GCA 72 bp | CCAGAAGGGGTATGGTTTTCCTTACCACGTCAGCCTTaGCCTGCTGGCTTGGTGAAGGGTCCTACGGCAGCA | + |
Preference number: 3 (lower is better) Translates to: PEGVWFSLPRQP*PAGLVKGPTAA Trigger: TGCTGCCGTAGGACCCTTCACCAAGCCAGCAGGGCAAGGCTGACGTGGTAAGGAAAACCATACCCCTTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR CCA 72 bp | AGGGGGAAGGTGCTCGGTCACCCTCACCAAAGGCCATaGAGGCCCAGGACGTTCAATGACACCAAAAGGAAG | + |
Preference number: 3 (lower is better) Translates to: RGKVLGHPHQRP*RPRTFNDTKRK Trigger: CTTCCTTTTGGTGTCATTGAACGTCCTGGGCCTCCATGGCCTTTGGTGAGGGTGACCGAGCACCTTCCCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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3UTR TCA 72 bp | TTTCCTTACCACGTCAGCCTTGCCCTGCTGGCTTGGTaGAGGGTCCTACGGCAGCACTCCTTGTATCGGGAA | + |
Preference number: 3 (lower is better) Translates to: FPYHVSLALLAW*RVLRQHSLYRE Trigger: TTCCCGATACAAGGAGTGCTGCCGTAGGACCCTTCACCAAGCCAGCAGGGCAAGGCTGACGTGGTAAGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR CCA 72 bp | TGTCCCGGGCCCCTCTTTCTGGTGGCTGGTGTGTCATaGGTGGTTTTACAACCACAGGCCACTCCATTAACC | + |
Preference number: 3 (lower is better) Translates to: CPGPLFLVAGVS*VVLQPQATPLT Trigger: GGTTAATGGAGTGGCCTGTGGTTGTAAAACCACCCATGACACACCAGCCACCAGAAAGAGGGGCCCGGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
||
3UTR CCA 72 bp | GGTATGGTTTTCCTTACCACGTCAGCCTTGCCCTGCTaGCTTGGTGAAGGGTCCTACGGCAGCACTCCTTGT | + |
Preference number: 3 (lower is better) Translates to: GMVFLTTSALPC*LGEGSYGSTPC Trigger: ACAAGGAGTGCTGCCGTAGGACCCTTCACCAAGCCAGCAGGGCAAGGCTGACGTGGTAAGGAAAACCATACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
||
3UTR TCA 72 bp | GTGCCTGTGGAGACCAGAGATCTCTTGAACGGCCTGTaGATAGTGAGAACTGAGCGCAGGTCCTCCGGTAGA | + |
Preference number: 3 (lower is better) Translates to: VPVETRDLLNGL*IVRTERRSSGR Trigger: TCTACCGGAGGACCTGCGCTCAGTTCTCACTATTCACAGGCCGTTCAAGAGATCTCTGGTCTCCACAGGCAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
||
3UTR TCA 72 bp | GCAGCTGGTGTGGGCGTGGTCACTTTAAGGAAGAGCTaGTGGATGGACACACAGGGTCAGAAGGGCTCTGAT | + |
Preference number: 3 (lower is better) Translates to: AAGVGVVTLRKS*WMDTQGQKGSD Trigger: ATCAGAGCCCTTCTGACCCTGTGTGTCCATCCATCAGCTCTTCCTTAAAGTGACCACGCCCACACCAGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR TCA 72 bp | CTTCATTTTACAGTGGGTTTGGACCAGGCTCCTAAGTaGTGGGAGCCAGGGCTCACCACACTCTTGGAGCCT | + |
Preference number: 3 (lower is better) Translates to: LHFTVGLDQAPK*WEPGLTTLLEP Trigger: AGGCTCCAAGAGTGTGGTGAGCCCTGGCTCCCATCACTTAGGAGCCTGGTCCAAACCCACTGTAAAATGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
||
3UTR CCA 72 bp | GGATTGGCTGCTCATTCTAGAAACCCAGAAGGGGTATaGTTTTCCTTACCACGTCAGCCTTGCCCTGCTGGC | + |
Preference number: 3 (lower is better) Translates to: GLAAHSRNPEGV*FSLPRQPCPAG Trigger: GCCAGCAGGGCAAGGCTGACGTGGTAAGGAAAACCATACCCCTTCTGGGTTTCTAGAATGAGCAGCCAATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR GCA 72 bp | ATGTTTGGTAGCAACCAGAGGTCCCCTTCCACAGACTaGGCAGATGTCTGCTCCAACATCTGGAGTGGAAGA | + |
Preference number: 3 (lower is better) Translates to: MFGSNQRSPSTD*ADVCSNIWSGR Trigger: TCTTCCACTCCAGATGTTGGAGCAGACATCTGCGCAGTCTGTGGAAGGGGACCTCTGGTTGCTACCAAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
||
3UTR CCA 72 bp | ACTCACCGGCAATCTGCCCCATGCTCAGGACTGGGGTaGGATTCCACCTTCTCTAGAGTAAAGCTGTTTACA | + |
Preference number: 3 (lower is better) Translates to: THRQSAPCSGLG*DSTFSRVKLFT Trigger: TGTAAACAGCTTTACTCTAGAGAAGGTGGAATCCCACCCCAGTCCTGAGCATGGGGCAGATTGCCGGTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
||
3UTR CCA 72 bp | CACAGACTGCGCAGATGTCTGCTCCAACATCTGGAGTaGAAGAGTTTATGCCCTCAAAGACACCACACCCAC | + |
Preference number: 3 (lower is better) Translates to: HRLRRCLLQHLE*KSLCPQRHHTH Trigger: GTGGGTGTGGTGTCTTTGAGGGCATAAACTCTTCCACTCCAGATGTTGGAGCAGACATCTGCGCAGTCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR TCA 72 bp | AAAGCCTACAGATCATGGAGAATCGGCACACCCCTCTaGACAGACCGGGCACAGCTTGGAAGCAAATGGAAA | + |
Preference number: 3 (lower is better) Translates to: KAYRSWRIGTPL*TDRAQLGSKWK Trigger: TTTCCATTTGCTTCCAAGCTGTGCCCGGTCTGTTCAGAGGGGTGTGCCGATTCTCCATGATCTGTAGGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR GCA 72 bp | AGATGTCTGCTCCAACATCTGGAGTGGAAGAGTTTATaGCCTCAAAGACACCACACCCACACCCATGAGGCA | + |
Preference number: 3 (lower is better) Translates to: RCLLQHLEWKSL*PQRHHTHTHEA Trigger: TGCCTCATGGGTGTGGGTGTGGTGTCTTTGAGGGCATAAACTCTTCCACTCCAGATGTTGGAGCAGACATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR-3UTR CAA 90 bp | TCAAGGCCAGCCTGGACTACCATAGTGAAACTGTCTCAAACAAATAAACATTTAGGGCTCACCACACTCTaGGAGCCTGGGGATGCTGGC | + |
Preference number: 3 (lower is better) Translates to: SRPAWTTIVKLSQTNKHLGLTTL*EPGDAG Trigger: GCCAGCATCCCCAGGCTCCAAGAGTGTGGTGAGCCC...TAAATGTTTATTTGTTTGAGACAGTTTCACTATGGTAGTCCAGGCTGGCCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR-3UTR CAA 90 bp | CACAGCTTAAAAACTAGGTCACCCAAACCAGGGGGAAGTGACGTTCAATTGTCAAAGGCTCCTGATGTATaGGTCCTCCATGAGACCAAA | + |
Preference number: 3 (lower is better) Translates to: HSLKTRSPKPGGSDVQLSKAPDV*VLHETK Trigger: TTTGGTCTCATGGAGGACCAATACATCAGGAGCCTT...TGACAATTGAACGTCACTTCCCCCTGGTTTGGGTGACCTAGTTTTTAAGCTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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3UTR TCA 72 bp | TGTCGACTCTTGTCACCCAGACAAGAGCCCCATTCATaGCATATCTCAAACCTGTATCCTCAGGGTTCGAAA | + |
Preference number: 3 (lower is better) Translates to: CRLLSPRQEPHS*HISNLYPQGSK Trigger: TTTCGAACCCTGAGGATACAGGTTTGAGATATGTCATGAATGGGGCTCTTGTCTGGGTGACAAGAGTCGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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3UTR CCA 72 bp | GCCAGCCTGGGCTACATAATGAGGTCAAGGCCAGCCTaGACTACCATAGTGAAACTGTCTCAAACAAATAAA | + |
Preference number: 3 (lower is better) Translates to: ASLGYIMRSRPA*TTIVKLSQTNK Trigger: TTTATTTGTTTGAGACAGTTTCACTATGGTAGTCCAGGCTGGCCTTGACCTCATTATGTAGCCCAGGCTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR-3UTR CAA 90 bp | ACAACCAGTGTGGCCCTGTTCATGCGAAGCACAAAAACTTACAATAAACTTTTGGTAAGGTCTTGTCATTaGTGGTTTTGTTTCCTCCAG | + |
Preference number: 3 (lower is better) Translates to: TTSVALFMRSTKTYNKLLVRSCH*WFCFLQ Trigger: CTGGAGGAAACAAAACCACAAATGACAAGACCTTAC...CAAAAGTTTATTGTAAGTTTTTGTGCTTCGCATGAACAGGGCCACACTGGTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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CDS-3UTR TCA 90 bp | ACCAGATGGGGACCGCCACCTGGCCAGCCTGGGCACTGGTTGTCCAGCCAAGAGGGTGCACATGGGGCCTaGGCACCGCTCCCGGCACCG | + |
Preference number: 4 (lower is better) Translates to: TRWGPPPGQPGHWLSSQEGAHGA*APLPAP Trigger: CGGTGCCGGGAGCGGTGCTCAGGCCCCATGTGCACC...CTCTTGGCTGGACAACCAGTGCCCAGGCTGGCCAGGTGGCGGTCCCCATCTGGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR TCA 90 bp | CGCCACCTGGCCAGCCTGGGCACTGGTTGTCCAGCCAAGAGACTCCACGGCACGCCATCCCATTCCTGGTaGCATCCACCAGGCCACCTC | + |
Preference number: 4 (lower is better) Translates to: RHLASLGTGCPAKRLHGTPSHSW*HPPGHL Trigger: GAGGTGGCCTGGTGGATGTCACCAGGAATGGGATGG...CGTGCCGTGGAGTCTCTTGGCTGGACAACCAGTGCCCAGGCTGGCCAGGTGGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR GCA 90 bp | ATAGACACCACCAGGGCAGAGCCCAGGTCTTGCTCGGGGCTTCTCCCTGCAGCCAGGCCGGCGGGCCCGTaGTCCCACAGGCATCTATGT | + |
Preference number: 4 (lower is better) Translates to: IDTTRAEPRSCSGLLPAARPAGP*SHRHLC Trigger: ACATAGATGCCTGTGGGAGCACGGGCCCGCCGGCCT...GGCTGCAGGGAGAAGCCCCGAGCAAGACCTGGGCTCTGCCCTGGTGGTGTCTAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR GCA 90 bp | ACCGCCACCTGGCCAGCCTGGGCACTGGTTGTCCAGCCAAGAGACTCCACGGCACAGGAGAGCGGTACCTaGCCCAGTGCACAGCCAGGT | + |
Preference number: 4 (lower is better) Translates to: TATWPAWALVVQPRDSTAQESGT*PSAQPG Trigger: ACCTGGCTGTGCACTGGGGCAGGTACCGCTCTCCTG...TGCCGTGGAGTCTCTTGGCTGGACAACCAGTGCCCAGGCTGGCCAGGTGGCGGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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3UTR CAA 72 bp | AGATGGGGACCGCCACCTGGCCAGCCTGGGCACTGGTaGTCCAGCCAAGAGACTCCACGGCACGCTGCTCAT | + |
Preference number: 4 (lower is better) Translates to: RWGPPPGQPGHW*SSQETPRHAAH Trigger: ATGAGCAGCGTGCCGTGGAGTCTCTTGGCTGGACAACCAGTGCCCAGGCTGGCCAGGTGGCGGTCCCCATCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR TCA 90 bp | CACCAGATGGGGACCGCCACCTGGCCAGCCTGGGCACTGGTTGTCCAGCCAAGACACCTCGTCGTACCATaGCTGCACATGGAACCCAGG | + |
Preference number: 4 (lower is better) Translates to: HQMGTATWPAWALVVQPRHLVVP*LHMEPR Trigger: CCTGGGTTCCATGTGCAGTCATGGTACGACGAGGTG...TCTTGGCTGGACAACCAGTGCCCAGGCTGGCCAGGTGGCGGTCCCCATCTGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR GCA 90 bp | CCACCAGGGCAGAGCCCAGGTCTTGCTCGGGGCTTCTCCCTGCAGCCCATCTGTAGACCTTCGCCTTGTTaGTCAGACAGCCTGCTGGGC | + |
Preference number: 4 (lower is better) Translates to: PPGQSPGLARGFSLQPICRPSPC*SDSLLG Trigger: GCCCAGCAGGCTGTCTGAGCAACAAGGCGAAGGTCT...ACAGATGGGCTGCAGGGAGAAGCCCCGAGCAAGACCTGGGCTCTGCCCTGGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | CCACCAGGGCAGAGCCCAGGTCTTGCTCGGGGCTTCTCCCTGCAGCCCATCTGTTCCTCCGTAGCTGGATaGACACTCAGAGCAGGGACG | + |
Preference number: 4 (lower is better) Translates to: PPGQSPGLARGFSLQPICSSVAG*TLRAGT Trigger: CGTCCCTGCTCTGAGTGTCCATCCAGCTACGGAGGA...ACAGATGGGCTGCAGGGAGAAGCCCCGAGCAAGACCTGGGCTCTGCCCTGGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR TCA 90 bp | AAGCCTTCCCCCTCCACCACCAAAGAAAACATGGCAAGGAGTGTCTCAGTGAGCGGTGCACATGGGGCCTaGGCACCGCTCCCGGCACCG | + |
Preference number: 4 (lower is better) Translates to: KPSPSTTKENMARSVSVSGAHGA*APLPAP Trigger: CGGTGCCGGGAGCGGTGCTCAGGCCCCATGTGCACC...GCTCACTGAGACACTCCTTGCCATGTTTTCTTTGGTGGTGGAGGGGGAAGGCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR TCA 90 bp | CCACCAGGGCAGAGCCCAGGTCTTGCTCGGGGCTTCTCCCTGCAGCCCATCTGTTTGATCACCCTGGGCTaGACCCAGACATGGGTTTCC | + |
Preference number: 4 (lower is better) Translates to: PPGQSPGLARGFSLQPICLITLG*TQTWVS Trigger: GGAAACCCATGTCTGGGTTCAGCCCAGGGTGATCAA...ACAGATGGGCTGCAGGGAGAAGCCCCGAGCAAGACCTGGGCTCTGCCCTGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | ACCGCCACCTGGCCAGCCTGGGCACTGGTTGTCCAGCCAAGAGACTCCACGGCACACAGCCGATCTTGTTaGTGGTGGCCCAGACCATCT | + |
Preference number: 4 (lower is better) Translates to: TATWPAWALVVQPRDSTAHSRSC*WWPRPS Trigger: AGATGGTCTGGGCCACCACCAACAAGATCGGCTGTG...TGCCGTGGAGTCTCTTGGCTGGACAACCAGTGCCCAGGCTGGCCAGGTGGCGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | CTCATGAGGGGGAAGGTGCTCGGTCACCCTCACCAAAGGCCATGGAGGCCCAGGGACATGGGTTTCCTCTaGAGCAGGGGGCGATTCCAC | + |
Preference number: 4 (lower is better) Translates to: LMRGKVLGHPHQRPWRPRDMGFL*SRGRFH Trigger: GTGGAATCGCCCCCTGCTCCAGAGGAAACCCATGTC...CCTGGGCCTCCATGGCCTTTGGTGAGGGTGACCGAGCACCTTCCCCCTCATGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | CACCAGATGGGGACCGCCACCTGGCCAGCCTGGGCACTGGTTGTCCAGCCAAGACAGCCTGCTGGGCACTaGTACCTGTTACACGTGGAT | + |
Preference number: 4 (lower is better) Translates to: HQMGTATWPAWALVVQPRQPAGH*YLLHVD Trigger: ATCCACGTGTAACAGGTACCAGTGCCCAGCAGGCTG...TCTTGGCTGGACAACCAGTGCCCAGGCTGGCCAGGTGGCGGTCCCCATCTGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR TCA 90 bp | CTCATGAGGGGGAAGGTGCTCGGTCACCCTCACCAAAGGCCATGGAGGCCCAGGTTGATCACCCTGGGCTaGACCCAGACATGGGTTTCC | + |
Preference number: 4 (lower is better) Translates to: LMRGKVLGHPHQRPWRPRLITLG*TQTWVS Trigger: GGAAACCCATGTCTGGGTTCAGCCCAGGGTGATCAA...CCTGGGCCTCCATGGCCTTTGGTGAGGGTGACCGAGCACCTTCCCCCTCATGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR GCA 90 bp | ACCGCCACCTGGCCAGCCTGGGCACTGGTTGTCCAGCCAAGAGACTCCACGGCACTGCATGCTGGTATTTaGTCAGCAGCTTCTCCAGGC | + |
Preference number: 4 (lower is better) Translates to: TATWPAWALVVQPRDSTALHAGI*SAASPG Trigger: GCCTGGAGAAGCTGCTGAGCAAATACCAGCATGCAG...TGCCGTGGAGTCTCTTGGCTGGACAACCAGTGCCCAGGCTGGCCAGGTGGCGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR GCA 90 bp | CACCAGATGGGGACCGCCACCTGGCCAGCCTGGGCACTGGTTGTCCAGCCAAGAGAGTGTGGCTCTGCATaGTGGTATTTGCTCAGCAGC | + |
Preference number: 4 (lower is better) Translates to: HQMGTATWPAWALVVQPRECGSA*WYLLSS Trigger: GCTGCTGAGCAAATACCAGCATGCAGAGCCACACTC...TCTTGGCTGGACAACCAGTGCCCAGGCTGGCCAGGTGGCGGTCCCCATCTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR GCA 90 bp | CCCAGAAGGGGTATGGTTTTCCTTACCACGTCAGCCTTGCCCTGCTGGCTTGGTAGGCCGGCGGGCCCGTaGTCCCACAGGCATCTATGT | + |
Preference number: 4 (lower is better) Translates to: PRRGMVFLTTSALPCWLGRPAGP*SHRHLC Trigger: ACATAGATGCCTGTGGGAGCACGGGCCCGCCGGCCT...ACCAAGCCAGCAGGGCAAGGCTGACGTGGTAAGGAAAACCATACCCCTTCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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CDS-3UTR GCA 90 bp | ACCGGCAATCTGCCCCATGCTCAGGACTGGGGTGGGATTCCACCTTCTCTAGAGCAGGAGAGCGGTACCTaGCCCAGTGCACAGCCAGGT | + |
Preference number: 4 (lower is better) Translates to: TGNLPHAQDWGGIPPSLEQESGT*PSAQPG Trigger: ACCTGGCTGTGCACTGGGGCAGGTACCGCTCTCCTG...CTCTAGAGAAGGTGGAATCCCACCCCAGTCCTGAGCATGGGGCAGATTGCCGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | ACCAGATGGGGACCGCCACCTGGCCAGCCTGGGCACTGGTTGTCCAGCCAAGAGTACCATGACTGCACATaGAACCCAGGAGAGCGGTAC | + |
Preference number: 4 (lower is better) Translates to: TRWGPPPGQPGHWLSSQEYHDCT*NPGERY Trigger: GTACCGCTCTCCTGGGTTCCATGTGCAGTCATGGTA...CTCTTGGCTGGACAACCAGTGCCCAGGCTGGCCAGGTGGCGGTCCCCATCTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | CCACCAGGGCAGAGCCCAGGTCTTGCTCGGGGCTTCTCCCTGCAGCCCATCTGTCGATCTTGTTGGTGGTaGCCCAGACCATCTGTGTGT | + |
Preference number: 4 (lower is better) Translates to: PPGQSPGLARGFSLQPICRSCWW*PRPSVC Trigger: ACACACAGATGGTCTGGGCCACCACCAACAAGATCG...ACAGATGGGCTGCAGGGAGAAGCCCCGAGCAAGACCTGGGCTCTGCCCTGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR GCA 90 bp | ATAGACACCACCAGGGCAGAGCCCAGGTCTTGCTCGGGGCTTCTCCCTGCAGCCGAGTGTGGCTCTGCATaGTGGTATTTGCTCAGCAGC | + |
Preference number: 4 (lower is better) Translates to: IDTTRAEPRSCSGLLPAAECGSA*WYLLSS Trigger: GCTGCTGAGCAAATACCAGCATGCAGAGCCACACTC...GGCTGCAGGGAGAAGCCCCGAGCAAGACCTGGGCTCTGCCCTGGTGGTGTCTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | CTCATGAGGGGGAAGGTGCTCGGTCACCCTCACCAAAGGCCATGGAGGCCCAGGCCAGGCTCGTGGTGTTaGGAAGGAAAAAGGCCTGTA | + |
Preference number: 4 (lower is better) Translates to: LMRGKVLGHPHQRPWRPRPGSWC*EGKRPV Trigger: TACAGGCCTTTTTCCTTCCCAACACCACGAGCCTGG...CCTGGGCCTCCATGGCCTTTGGTGAGGGTGACCGAGCACCTTCCCCCTCATGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | ACCAGATGGGGACCGCCACCTGGCCAGCCTGGGCACTGGTTGTCCAGCCAAGAGTGTGGCTCTGCATGCTaGTATTTGCTCAGCAGCTTC | + |
Preference number: 4 (lower is better) Translates to: TRWGPPPGQPGHWLSSQECGSAC*YLLSSF Trigger: GAAGCTGCTGAGCAAATACCAGCATGCAGAGCCACA...CTCTTGGCTGGACAACCAGTGCCCAGGCTGGCCAGGTGGCGGTCCCCATCTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | CACCAGATGGGGACCGCCACCTGGCCAGCCTGGGCACTGGTTGTCCAGCCAAGATCATGTGTTCCATGTTaGAGGCAGGGGGATACACCT | + |
Preference number: 4 (lower is better) Translates to: HQMGTATWPAWALVVQPRSCVPC*RQGDTP Trigger: AGGTGTATCCCCCTGCCTCCAACATGGAACACATGA...TCTTGGCTGGACAACCAGTGCCCAGGCTGGCCAGGTGGCGGTCCCCATCTGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | CTCCTAAGTGATGGGAGCCAGGGCTCACCACACTCTTGGAGCCTGGGGATGCTGTCCTCCGTAGCTGGATaGACACTCAGAGCAGGGACG | + |
Preference number: 4 (lower is better) Translates to: LLSDGSQGSPHSWSLGMLSSVAG*TLRAGT Trigger: CGTCCCTGCTCTGAGTGTCCATCCAGCTACGGAGGA...CAGCATCCCCAGGCTCCAAGAGTGTGGTGAGCCCTGGCTCCCATCACTTAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR TCA 90 bp | CACCAGATGGGGACCGCCACCTGGCCAGCCTGGGCACTGGTTGTCCAGCCAAGACGTCTCTGTCACTTTTaGCACAGTGAAGGAGCTAGA | + |
Preference number: 4 (lower is better) Translates to: HQMGTATWPAWALVVQPRRLCHF*HSEGAR Trigger: TCTAGCTCCTTCACTGTGTCAAAAGTGACAGAGACG...TCTTGGCTGGACAACCAGTGCCCAGGCTGGCCAGGTGGCGGTCCCCATCTGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR GCA 90 bp | AAGCCTTCCCCCTCCACCACCAAAGAAAACATGGCAAGGAGTGTCTCAGTGAGCAGGCCGGCGGGCCCGTaGTCCCACAGGCATCTATGT | + |
Preference number: 4 (lower is better) Translates to: KPSPSTTKENMARSVSVSRPAGP*SHRHLC Trigger: ACATAGATGCCTGTGGGAGCACGGGCCCGCCGGCCT...GCTCACTGAGACACTCCTTGCCATGTTTTCTTTGGTGGTGGAGGGGGAAGGCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | ATAGACACCACCAGGGCAGAGCCCAGGTCTTGCTCGGGGCTTCTCCCTGCAGCCTCATGTGTTCCATGTTaGAGGCAGGGGGATACACCT | + |
Preference number: 4 (lower is better) Translates to: IDTTRAEPRSCSGLLPAASCVPC*RQGDTP Trigger: AGGTGTATCCCCCTGCCTCCAACATGGAACACATGA...GGCTGCAGGGAGAAGCCCCGAGCAAGACCTGGGCTCTGCCCTGGTGGTGTCTAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | CTCCTAAGTGATGGGAGCCAGGGCTCACCACACTCTTGGAGCCTGGGGATGCTGAGCCGATCTTGTTGGTaGTGGCCCAGACCATCTGTG | + |
Preference number: 4 (lower is better) Translates to: LLSDGSQGSPHSWSLGMLSRSCW*WPRPSV Trigger: CACAGATGGTCTGGGCCACCACCAACAAGATCGGCT...CAGCATCCCCAGGCTCCAAGAGTGTGGTGAGCCCTGGCTCCCATCACTTAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | AAGGAGTGTCTCAGTGAGCAGCTCCTGAGAGGAGGTGAGCCACCAGATGGGGACAGCCTCCTCCGTAGCTaGATGGACACTCAGAGCAGG | + |
Preference number: 4 (lower is better) Translates to: KECLSEQLLRGGEPPDGDSLLRS*MDTQSR Trigger: CCTGCTCTGAGTGTCCATCCAGCTACGGAGGAGGCT...GTCCCCATCTGGTGGCTCACCTCCTCTCAGGAGCTGCTCACTGAGACACTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR TCA 90 bp | CGCCACCTGGCCAGCCTGGGCACTGGTTGTCCAGCCAAGAGACTCCACGGCACGTCCATGCCATTTTTCTaGGACTTGACAAAGAAGGGT | + |
Preference number: 4 (lower is better) Translates to: RHLASLGTGCPAKRLHGTSMPFF*DLTKKG Trigger: ACCCTTCTTTGTCAAGTCTCAGAAAAATGGCATGGA...CGTGCCGTGGAGTCTCTTGGCTGGACAACCAGTGCCCAGGCTGGCCAGGTGGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR TCA 90 bp | ATAGACACCACCAGGGCAGAGCCCAGGTCTTGCTCGGGGCTTCTCCCTGCAGCCCGTCTCTGTCACTTTTaGCACAGTGAAGGAGCTAGA | + |
Preference number: 4 (lower is better) Translates to: IDTTRAEPRSCSGLLPAARLCHF*HSEGAR Trigger: TCTAGCTCCTTCACTGTGTCAAAAGTGACAGAGACG...GGCTGCAGGGAGAAGCCCCGAGCAAGACCTGGGCTCTGCCCTGGTGGTGTCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR GCA 90 bp | GGAGGCCCAGGACGTTCAATGACACCAAAAGGAAGATTCCTGACTCTCTGTCACCGGTACCTGCCCCAGTaGACAGCCAGGTTCTGCCCG | + |
Preference number: 4 (lower is better) Translates to: GGPGRSMTPKGRFLTLCHRYLPQ*TARFCP Trigger: CGGGCAGAACCTGGCTGTGCACTGGGGCAGGTACCG...GTGACAGAGAGTCAGGAATCTTCCTTTTGGTGTCATTGAACGTCCTGGGCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR GCA 90 bp | ACCGCCACCTGGCCAGCCTGGGCACTGGTTGTCCAGCCAAGAGACTCCACGGCACCTTGGGAGAATAATTaGAGACGAGATACACGGCAT | + |
Preference number: 4 (lower is better) Translates to: TATWPAWALVVQPRDSTAPWENN*RRDTRH Trigger: ATGCCGTGTATCTCGTCTGCAATTATTCTCCCAAGG...TGCCGTGGAGTCTCTTGGCTGGACAACCAGTGCCCAGGCTGGCCAGGTGGCGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR GCA 90 bp | ACCAGATGGGGACCGCCACCTGGCCAGCCTGGGCACTGGTTGTCCAGCCAAGAGCCTTGGGAGAATAATTaGAGACGAGATACACGGCAT | + |
Preference number: 4 (lower is better) Translates to: TRWGPPPGQPGHWLSSQEPWENN*RRDTRH Trigger: ATGCCGTGTATCTCGTCTGCAATTATTCTCCCAAGG...CTCTTGGCTGGACAACCAGTGCCCAGGCTGGCCAGGTGGCGGTCCCCATCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR GCA 90 bp | ACCGCCACCTGGCCAGCCTGGGCACTGGTTGTCCAGCCAAGAGACTCCACGGCATACACGTGGATCCTTTaGATGAGTCCTTCATCTTGG | + |
Preference number: 4 (lower is better) Translates to: TATWPAWALVVQPRDSTAYTWIL*MSPSSW Trigger: CCAAGATGAAGGACTCATGCAAAGGATCCACGTGTA...TGCCGTGGAGTCTCTTGGCTGGACAACCAGTGCCCAGGCTGGCCAGGTGGCGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | CTCCTAAGTGATGGGAGCCAGGGCTCACCACACTCTTGGAGCCTGGGGATGCTGTACCATGACTGCACATaGAACCCAGGAGAGCGGTAC | + |
Preference number: 4 (lower is better) Translates to: LLSDGSQGSPHSWSLGMLYHDCT*NPGERY Trigger: GTACCGCTCTCCTGGGTTCCATGTGCAGTCATGGTA...CAGCATCCCCAGGCTCCAAGAGTGTGGTGAGCCCTGGCTCCCATCACTTAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | CGCCACCTGGCCAGCCTGGGCACTGGTTGTCCAGCCAAGAGACTCCACGGCACGCAATCCAGTTTCCCTTaGGAGAATAATTGCAGACGA | + |
Preference number: 4 (lower is better) Translates to: RHLASLGTGCPAKRLHGTQSSFP*ENNCRR Trigger: TCGTCTGCAATTATTCTCCCAAGGGAAACTGGATTG...CGTGCCGTGGAGTCTCTTGGCTGGACAACCAGTGCCCAGGCTGGCCAGGTGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | CTTGCAAAGCCAAACCCCAGAGGAGGACACCTAGATCTGCTGAGGGTGGGGCAGCAGCCTGCTGGGCACTaGTACCTGTTACACGTGGAT | + |
Preference number: 4 (lower is better) Translates to: LAKPNPRGGHLDLLRVGQQPAGH*YLLHVD Trigger: ATCCACGTGTAACAGGTACCAGTGCCCAGCAGGCTG...CTGCCCCACCCTCAGCAGATCTAGGTGTCCTCCTCTGGGGTTTGGCTTTGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | ACCAGATGGGGACCGCCACCTGGCCAGCCTGGGCACTGGTTGTCCAGCCAAGAGTATCAGCATAGATGTTaGTTCCATACACAGGAGCCC | + |
Preference number: 4 (lower is better) Translates to: TRWGPPPGQPGHWLSSQEYQHRC*FHTQEP Trigger: GGGCTCCTGTGTATGGAACCAACATCTATGCTGATA...CTCTTGGCTGGACAACCAGTGCCCAGGCTGGCCAGGTGGCGGTCCCCATCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR TCA 90 bp | CACACCCCTCTGAACAGACCGGGCACAGCTTGGAAGCAAATGGAAACTCTCACCCACCTCGTCGTACCATaGCTGCACATGGAACCCAGG | + |
Preference number: 4 (lower is better) Translates to: HTPLNRPGTAWKQMETLTHLVVP*LHMEPR Trigger: CCTGGGTTCCATGTGCAGTCATGGTACGACGAGGTG...GGTGAGAGTTTCCATTTGCTTCCAAGCTGTGCCCGGTCTGTTCAGAGGGGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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CDS-3UTR TCA 90 bp | CTGTATCCTCAGGGTTCGAAAGCCTTCCCCCTCCACCACCAAAGAAAACATGGCCCATCCCATTCCTGGTaGCATCCACCAGGCCACCTC | + |
Preference number: 4 (lower is better) Translates to: LYPQGSKAFPLHHQRKHGPSHSW*HPPGHL Trigger: GAGGTGGCCTGGTGGATGTCACCAGGAATGGGATGG...GCCATGTTTTCTTTGGTGGTGGAGGGGGAAGGCTTTCGAACCCTGAGGATACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR TCA 90 bp | ACCGCCACCTGGCCAGCCTGGGCACTGGTTGTCCAGCCAAGAGACTCCACGGCATCCATGCCATTTTTCTaGGACTTGACAAAGAAGGGT | + |
Preference number: 4 (lower is better) Translates to: TATWPAWALVVQPRDSTASMPFF*DLTKKG Trigger: ACCCTTCTTTGTCAAGTCTCAGAAAAATGGCATGGA...TGCCGTGGAGTCTCTTGGCTGGACAACCAGTGCCCAGGCTGGCCAGGTGGCGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR GCA 90 bp | GAGGCAGCCCTTATTCTAAGAAGTGAGAAGACATCTGAGACCTGGAGCCTCTTGCGGTACCTGCCCCAGTaGACAGCCAGGTTCTGCCCG | + |
Preference number: 4 (lower is better) Translates to: EAALILRSEKTSETWSLLRYLPQ*TARFCP Trigger: CGGGCAGAACCTGGCTGTGCACTGGGGCAGGTACCG...CAAGAGGCTCCAGGTCTCAGATGTCTTCTCACTTCTTAGAATAAGGGCTGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR GCA 90 bp | ACCGGCAATCTGCCCCATGCTCAGGACTGGGGTGGGATTCCACCTTCTCTAGAGTCGTCGTACCATGACTaGACATGGAACCCAGGAGAG | + |
Preference number: 4 (lower is better) Translates to: TGNLPHAQDWGGIPPSLESSYHD*TWNPGE Trigger: CTCTCCTGGGTTCCATGTGCAGTCATGGTACGACGA...CTCTAGAGAAGGTGGAATCCCACCCCAGTCCTGAGCATGGGGCAGATTGCCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | CACACCCCTCTGAACAGACCGGGCACAGCTTGGAAGCAAATGGAAACTCTCACCTCCTCCGTAGCTGGATaGACACTCAGAGCAGGGACG | + |
Preference number: 4 (lower is better) Translates to: HTPLNRPGTAWKQMETLTSSVAG*TLRAGT Trigger: CGTCCCTGCTCTGAGTGTCCATCCAGCTACGGAGGA...GGTGAGAGTTTCCATTTGCTTCCAAGCTGTGCCCGGTCTGTTCAGAGGGGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR CAA 72 bp | ACTAGGTCACCCAAACCAGGGGGAAGTGACGTTCAATaGTCACTCTTGACGGCGGCTGGGAGGCAGCCCTTA | + |
Preference number: 4 (lower is better) Translates to: TRSPKPGGSDVQ*SLLTAAGRQPL Trigger: TAAGGGCTGCCTCCCAGCCGCCGTCAAGAGTGACAATTGAACGTCACTTCCCCCTGGTTTGGGTGACCTAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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3UTR CAA 72 bp | TGGTTTTCCTTACCACGTCAGCCTTGCCCTGCTGGCTaGGTGAAGGGTCCTACGGCAGCACTCCTTGTATCG | + |
Preference number: 4 (lower is better) Translates to: WFSLPRQPCPAG*VKGPTAALLVS Trigger: CGATACAAGGAGTGCTGCCGTAGGACCCTTCACCAAGCCAGCAGGGCAAGGCTGACGTGGTAAGGAAAACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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3UTR CAA 72 bp | GAATCGGCACACCCCTCTGAACAGACCGGGCACAGCTaGGAAGCAAATGGAAACTCTCACCCAACGCAGGAC | + |
Preference number: 4 (lower is better) Translates to: ESAHPSEQTGHS*EANGNSHPTQD Trigger: GTCCTGCGTTGGGTGAGAGTTTCCATTTGCTTCCAAGCTGTGCCCGGTCTGTTCAGAGGGGTGTGCCGATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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CDS-3UTR TCA 90 bp | AAGGAGTGTCTCAGTGAGCAGCTCCTGAGAGGAGGTGAGCCACCAGATGGGGACTCTGGTTTATGCTTGTaGGGCTTTTCTGCTCGGTGG | + |
Preference number: 4 (lower is better) Translates to: KECLSEQLLRGGEPPDGDSGLCL*GFSARW Trigger: CCACCGAGCAGAAAAGCCTCACAAGCATAAACCAGA...GTCCCCATCTGGTGGCTCACCTCCTCTCAGGAGCTGCTCACTGAGACACTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034282.16 |
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CDS-3UTR TCA 90 bp | AAGCCTTCCCCCTCCACCACCAAAGAAAACATGGCAAGGAGTGTCTCAGTGAGCGGGTCTTCTTGGTCTTaGTCACCCTGGGCTGAACCC | + |
Preference number: 4 (lower is better) Translates to: KPSPSTTKENMARSVSVSGSSWS*SPWAEP Trigger: GGGTTCAGCCCAGGGTGATCAAGACCAAGAAGACCC...GCTCACTGAGACACTCCTTGCCATGTTTTCTTTGGTGGTGGAGGGGGAAGGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR TCA 90 bp | CAACCACAGGCCACTCCATTAACCCCCATGAGGAATGTGCCAGGAATCTACTCCGGGTCTTCTTGGTCTTaGTCACCCTGGGCTGAACCC | + |
Preference number: 4 (lower is better) Translates to: QPQATPLTPMRNVPGIYSGSSWS*SPWAEP Trigger: GGGTTCAGCCCAGGGTGATCAAGACCAAGAAGACCC...GGAGTAGATTCCTGGCACATTCCTCATGGGGGTTAATGGAGTGGCCTGTGGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR TCA 90 bp | ACCGGCAATCTGCCCCATGCTCAGGACTGGGGTGGGATTCCACCTTCTCTAGAGCGTGGATCCTTTGCATaGGTCCTTCATCTTGGTGTC | + |
Preference number: 4 (lower is better) Translates to: TGNLPHAQDWGGIPPSLERGSFA*VLHLGV Trigger: GACACCAAGATGAAGGACTCATGCAAAGGATCCACG...CTCTAGAGAAGGTGGAATCCCACCCCAGTCCTGAGCATGGGGCAGATTGCCGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR TCA 90 bp | CTCATGAGGGGGAAGGTGCTCGGTCACCCTCACCAAAGGCCATGGAGGCCCAGGCATTTTTCTGAGACTTaGCAAAGAAGGGTACCATCC | + |
Preference number: 4 (lower is better) Translates to: LMRGKVLGHPHQRPWRPRHFSET*QRRVPS Trigger: GGATGGTACCCTTCTTTGTCAAGTCTCAGAAAAATG...CCTGGGCCTCCATGGCCTTTGGTGAGGGTGACCGAGCACCTTCCCCCTCATGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR GCA 90 bp | GAGGCAGCCCTTATTCTAAGAAGTGAGAAGACATCTGAGACCTGGAGCCTCTTGCAGGAGAGCGGTACCTaGCCCAGTGCACAGCCAGGT | + |
Preference number: 4 (lower is better) Translates to: EAALILRSEKTSETWSLLQESGT*PSAQPG Trigger: ACCTGGCTGTGCACTGGGGCAGGTACCGCTCTCCTG...CAAGAGGCTCCAGGTCTCAGATGTCTTCTCACTTCTTAGAATAAGGGCTGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | CTTGCAAAGCCAAACCCCAGAGGAGGACACCTAGATCTGCTGAGGGTGGGGCAGTGTGGCTCTGCATGCTaGTATTTGCTCAGCAGCTTC | + |
Preference number: 4 (lower is better) Translates to: LAKPNPRGGHLDLLRVGQCGSAC*YLLSSF Trigger: GAAGCTGCTGAGCAAATACCAGCATGCAGAGCCACA...CTGCCCCACCCTCAGCAGATCTAGGTGTCCTCCTCTGGGGTTTGGCTTTGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | AAGCCTTCCCCCTCCACCACCAAAGAAAACATGGCAAGGAGTGTCTCAGTGAGCGACATGGGTTTCCTCTaGAGCAGGGGGCGATTCCAC | + |
Preference number: 4 (lower is better) Translates to: KPSPSTTKENMARSVSVSDMGFL*SRGRFH Trigger: GTGGAATCGCCCCCTGCTCCAGAGGAAACCCATGTC...GCTCACTGAGACACTCCTTGCCATGTTTTCTTTGGTGGTGGAGGGGGAAGGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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3UTR CAA 72 bp | GGCAGCACTCCTTGTATCGGGAAGTTTCCCAGATGTTaGGTAGCAACCAGAGGTCCCCTTCCACAGACTGCG | + |
Preference number: 4 (lower is better) Translates to: GSTPCIGKFPRC*VATRGPLPQTA Trigger: CGCAGTCTGTGGAAGGGGACCTCTGGTTGCTACCAAACATCTGGGAAACTTCCCGATACAAGGAGTGCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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CDS-3UTR TCA 90 bp | GGAGGCCCAGGACGTTCAATGACACCAAAAGGAAGATTCCTGACTCTCTGTCACCACCTCGTCGTACCATaGCTGCACATGGAACCCAGG | + |
Preference number: 4 (lower is better) Translates to: GGPGRSMTPKGRFLTLCHHLVVP*LHMEPR Trigger: CCTGGGTTCCATGTGCAGTCATGGTACGACGAGGTG...GTGACAGAGAGTCAGGAATCTTCCTTTTGGTGTCATTGAACGTCCTGGGCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR TCA 90 bp | GGGTCCTACGGCAGCACTCCTTGTATCGGGAAGTTTCCCAGATGTTTGGTAGCATTGATCACCCTGGGCTaGACCCAGACATGGGTTTCC | + |
Preference number: 4 (lower is better) Translates to: GSYGSTPCIGKFPRCLVALITLG*TQTWVS Trigger: GGAAACCCATGTCTGGGTTCAGCCCAGGGTGATCAA...TGCTACCAAACATCTGGGAAACTTCCCGATACAAGGAGTGCTGCCGTAGGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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CDS-3UTR TCA 90 bp | AAGGAGTGTCTCAGTGAGCAGCTCCTGAGAGGAGGTGAGCCACCAGATGGGGACCGTCTCTGTCACTTTTaGCACAGTGAAGGAGCTAGA | + |
Preference number: 4 (lower is better) Translates to: KECLSEQLLRGGEPPDGDRLCHF*HSEGAR Trigger: TCTAGCTCCTTCACTGTGTCAAAAGTGACAGAGACG...GTCCCCATCTGGTGGCTCACCTCCTCTCAGGAGCTGCTCACTGAGACACTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR GCA 90 bp | CACAGCTTAAAAACTAGGTCACCCAAACCAGGGGGAAGTGACGTTCAATTGTCACGGTACCTGCCCCAGTaGACAGCCAGGTTCTGCCCG | + |
Preference number: 4 (lower is better) Translates to: HSLKTRSPKPGGSDVQLSRYLPQ*TARFCP Trigger: CGGGCAGAACCTGGCTGTGCACTGGGGCAGGTACCG...TGACAATTGAACGTCACTTCCCCCTGGTTTGGGTGACCTAGTTTTTAAGCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR GCA 90 bp | CCATGGAGGCCCAGGACGTTCAATGACACCAAAAGGAAGATTCCTGACTCTCTGAGACCTTCGCCTTGTTaGTCAGACAGCCTGCTGGGC | + |
Preference number: 4 (lower is better) Translates to: PWRPRTFNDTKRKIPDSLRPSPC*SDSLLG Trigger: GCCCAGCAGGCTGTCTGAGCAACAAGGCGAAGGTCT...CAGAGAGTCAGGAATCTTCCTTTTGGTGTCATTGAACGTCCTGGGCCTCCATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | CACACCCCTCTGAACAGACCGGGCACAGCTTGGAAGCAAATGGAAACTCTCACCCCAGGCTCGTGGTGTTaGGAAGGAAAAAGGCCTGTA | + |
Preference number: 4 (lower is better) Translates to: HTPLNRPGTAWKQMETLTPGSWC*EGKRPV Trigger: TACAGGCCTTTTTCCTTCCCAACACCACGAGCCTGG...GGTGAGAGTTTCCATTTGCTTCCAAGCTGTGCCCGGTCTGTTCAGAGGGGTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | CTCAGGGTTCGAAAGCCTTCCCCCTCCACCACCAAAGAAAACATGGCAAGGAGTCACAGCCGATCTTGTTaGTGGTGGCCCAGACCATCT | + |
Preference number: 4 (lower is better) Translates to: LRVRKPSPSTTKENMARSHSRSC*WWPRPS Trigger: AGATGGTCTGGGCCACCACCAACAAGATCGGCTGTG...ACTCCTTGCCATGTTTTCTTTGGTGGTGGAGGGGGAAGGCTTTCGAACCCTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | CACCGGCAATCTGCCCCATGCTCAGGACTGGGGTGGGATTCCACCTTCTCTAGAGGTACCTGTTACACGTaGATCCTTTGCATGAGTCCT | + |
Preference number: 4 (lower is better) Translates to: HRQSAPCSGLGWDSTFSRGTCYT*ILCMSP Trigger: AGGACTCATGCAAAGGATCCACGTGTAACAGGTACC...TCTAGAGAAGGTGGAATCCCACCCCAGTCCTGAGCATGGGGCAGATTGCCGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | AAGCCTTCCCCCTCCACCACCAAAGAAAACATGGCAAGGAGTGTCTCAGTGAGCCAGCCTGCTGGGCACTaGTACCTGTTACACGTGGAT | + |
Preference number: 4 (lower is better) Translates to: KPSPSTTKENMARSVSVSQPAGH*YLLHVD Trigger: ATCCACGTGTAACAGGTACCAGTGCCCAGCAGGCTG...GCTCACTGAGACACTCCTTGCCATGTTTTCTTTGGTGGTGGAGGGGGAAGGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR TCA 90 bp | GAGGCAGCCCTTATTCTAAGAAGTGAGAAGACATCTGAGACCTGGAGCCTCTTGGGGTCTTCTTGGTCTTaGTCACCCTGGGCTGAACCC | + |
Preference number: 4 (lower is better) Translates to: EAALILRSEKTSETWSLLGSSWS*SPWAEP Trigger: GGGTTCAGCCCAGGGTGATCAAGACCAAGAAGACCC...CAAGAGGCTCCAGGTCTCAGATGTCTTCTCACTTCTTAGAATAAGGGCTGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR TCA 90 bp | CTCCTAAGTGATGGGAGCCAGGGCTCACCACACTCTTGGAGCCTGGGGATGCTGTCCATGCCATTTTTCTaGGACTTGACAAAGAAGGGT | + |
Preference number: 4 (lower is better) Translates to: LLSDGSQGSPHSWSLGMLSMPFF*DLTKKG Trigger: ACCCTTCTTTGTCAAGTCTCAGAAAAATGGCATGGA...CAGCATCCCCAGGCTCCAAGAGTGTGGTGAGCCCTGGCTCCCATCACTTAGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR GCA 90 bp | CAACCACAGGCCACTCCATTAACCCCCATGAGGAATGTGCCAGGAATCTACTCCTCGTCGTACCATGACTaGACATGGAACCCAGGAGAG | + |
Preference number: 4 (lower is better) Translates to: QPQATPLTPMRNVPGIYSSSYHD*TWNPGE Trigger: CTCTCCTGGGTTCCATGTGCAGTCATGGTACGACGA...GGAGTAGATTCCTGGCACATTCCTCATGGGGGTTAATGGAGTGGCCTGTGGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR GCA 90 bp | GGAGGCCCAGGACGTTCAATGACACCAAAAGGAAGATTCCTGACTCTCTGTCACGTTGCTCAGACAGCCTaGTGGGCACTGGTACCTGTT | + |
Preference number: 4 (lower is better) Translates to: GGPGRSMTPKGRFLTLCHVAQTA*WALVPV Trigger: AACAGGTACCAGTGCCCAGCAGGCTGTCTGAGCAAC...GTGACAGAGAGTCAGGAATCTTCCTTTTGGTGTCATTGAACGTCCTGGGCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR GCA 90 bp | ATGGTAGGGAAGGCTCCTGATGTATTGGTCCTCCATGAGACCAAAGGTCATGTGAGACCTTCGCCTTGTTaGTCAGACAGCCTGCTGGGC | + |
Preference number: 4 (lower is better) Translates to: MVGKAPDVLVLHETKGHVRPSPC*SDSLLG Trigger: GCCCAGCAGGCTGTCTGAGCAACAAGGCGAAGGTCT...CACATGACCTTTGGTCTCATGGAGGACCAATACATCAGGAGCCTTCCCTACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | CTCAGGGTTCGAAAGCCTTCCCCCTCCACCACCAAAGAAAACATGGCAAGGAGTTACCATGACTGCACATaGAACCCAGGAGAGCGGTAC | + |
Preference number: 4 (lower is better) Translates to: LRVRKPSPSTTKENMARSYHDCT*NPGERY Trigger: GTACCGCTCTCCTGGGTTCCATGTGCAGTCATGGTA...ACTCCTTGCCATGTTTTCTTTGGTGGTGGAGGGGGAAGGCTTTCGAACCCTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | CTCCTAAGTGATGGGAGCCAGGGCTCACCACACTCTTGGAGCCTGGGGATGCTGCAATCCAGTTTCCCTTaGGAGAATAATTGCAGACGA | + |
Preference number: 4 (lower is better) Translates to: LLSDGSQGSPHSWSLGMLQSSFP*ENNCRR Trigger: TCGTCTGCAATTATTCTCCCAAGGGAAACTGGATTG...CAGCATCCCCAGGCTCCAAGAGTGTGGTGAGCCCTGGCTCCCATCACTTAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | CTTGCAAAGCCAAACCCCAGAGGAGGACACCTAGATCTGCTGAGGGTGGGGCAGTATCAGCATAGATGTTaGTTCCATACACAGGAGCCC | + |
Preference number: 4 (lower is better) Translates to: LAKPNPRGGHLDLLRVGQYQHRC*FHTQEP Trigger: GGGCTCCTGTGTATGGAACCAACATCTATGCTGATA...CTGCCCCACCCTCAGCAGATCTAGGTGTCCTCCTCTGGGGTTTGGCTTTGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR TCA 90 bp | AAGCCTTCCCCCTCCACCACCAAAGAAAACATGGCAAGGAGTGTCTCAGTGAGCCGTGGATCCTTTGCATaGGTCCTTCATCTTGGTGTC | + |
Preference number: 4 (lower is better) Translates to: KPSPSTTKENMARSVSVSRGSFA*VLHLGV Trigger: GACACCAAGATGAAGGACTCATGCAAAGGATCCACG...GCTCACTGAGACACTCCTTGCCATGTTTTCTTTGGTGGTGGAGGGGGAAGGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR TCA 90 bp | CACCGGCAATCTGCCCCATGCTCAGGACTGGGGTGGGATTCCACCTTCTCTAGACATTTTTCTGAGACTTaGCAAAGAAGGGTACCATCC | + |
Preference number: 4 (lower is better) Translates to: HRQSAPCSGLGWDSTFSRHFSET*QRRVPS Trigger: GGATGGTACCCTTCTTTGTCAAGTCTCAGAAAAATG...TCTAGAGAAGGTGGAATCCCACCCCAGTCCTGAGCATGGGGCAGATTGCCGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR TCA 90 bp | ACCGGCAATCTGCCCCATGCTCAGGACTGGGGTGGGATTCCACCTTCTCTAGAGCATTTTTCTGAGACTTaGCAAAGAAGGGTACCATCC | + |
Preference number: 4 (lower is better) Translates to: TGNLPHAQDWGGIPPSLEHFSET*QRRVPS Trigger: GGATGGTACCCTTCTTTGTCAAGTCTCAGAAAAATG...CTCTAGAGAAGGTGGAATCCCACCCCAGTCCTGAGCATGGGGCAGATTGCCGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR GCA 90 bp | ATGGTAGGGAAGGCTCCTGATGTATTGGTCCTCCATGAGACCAAAGGTCATGTGGTTGCTCAGACAGCCTaGTGGGCACTGGTACCTGTT | + |
Preference number: 4 (lower is better) Translates to: MVGKAPDVLVLHETKGHVVAQTA*WALVPV Trigger: AACAGGTACCAGTGCCCAGCAGGCTGTCTGAGCAAC...CACATGACCTTTGGTCTCATGGAGGACCAATACATCAGGAGCCTTCCCTACCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | ACAGAAGCATGCTTCATTTTACAGTGGGTTTGGACCAGGCTCCTAAGTGATGGGAGCCTCCTCCGTAGCTaGATGGACACTCAGAGCAGG | + |
Preference number: 4 (lower is better) Translates to: TEACFILQWVWTRLLSDGSLLRS*MDTQSR Trigger: CCTGCTCTGAGTGTCCATCCAGCTACGGAGGAGGCT...CCCATCACTTAGGAGCCTGGTCCAAACCCACTGTAAAATGAAGCATGCTTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | CTTGCAAAGCCAAACCCCAGAGGAGGACACCTAGATCTGCTGAGGGTGGGGCAGCATGAAGTTGATGACTaGGGTCTTCTTGGTCTTGAT | + |
Preference number: 4 (lower is better) Translates to: LAKPNPRGGHLDLLRVGQHEVDD*GLLGLD Trigger: ATCAAGACCAAGAAGACCCCAGTCATCAACTTCATG...CTGCCCCACCCTCAGCAGATCTAGGTGTCCTCCTCTGGGGTTTGGCTTTGCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR GCA 90 bp | GAGGCAGCCCTTATTCTAAGAAGTGAGAAGACATCTGAGACCTGGAGCCTCTTGCTGCATGCTGGTATTTaGTCAGCAGCTTCTCCAGGC | + |
Preference number: 4 (lower is better) Translates to: EAALILRSEKTSETWSLLLHAGI*SAASPG Trigger: GCCTGGAGAAGCTGCTGAGCAAATACCAGCATGCAG...CAAGAGGCTCCAGGTCTCAGATGTCTTCTCACTTCTTAGAATAAGGGCTGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | CCAGACAAGAGCCCCATTCATGACATATCTCAAACCTGTATCCTCAGGGTTCGAAGCCGATCTTGTTGGTaGTGGCCCAGACCATCTGTG | + |
Preference number: 4 (lower is better) Translates to: PDKSPIHDISQTCILRVRSRSCW*WPRPSV Trigger: CACAGATGGTCTGGGCCACCACCAACAAGATCGGCT...TCGAACCCTGAGGATACAGGTTTGAGATATGTCATGAATGGGGCTCTTGTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | CACAGCTTAAAAACTAGGTCACCCAAACCAGGGGGAAGTGACGTTCAATTGTCAGACATGGGTTTCCTCTaGAGCAGGGGGCGATTCCAC | + |
Preference number: 4 (lower is better) Translates to: HSLKTRSPKPGGSDVQLSDMGFL*SRGRFH Trigger: GTGGAATCGCCCCCTGCTCCAGAGGAAACCCATGTC...TGACAATTGAACGTCACTTCCCCCTGGTTTGGGTGACCTAGTTTTTAAGCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR GCA 90 bp | CTCAGGGTTCGAAAGCCTTCCCCCTCCACCACCAAAGAAAACATGGCAAGGAGTCCTTGGGAGAATAATTaGAGACGAGATACACGGCAT | + |
Preference number: 4 (lower is better) Translates to: LRVRKPSPSTTKENMARSPWENN*RRDTRH Trigger: ATGCCGTGTATCTCGTCTGCAATTATTCTCCCAAGG...ACTCCTTGCCATGTTTTCTTTGGTGGTGGAGGGGGAAGGCTTTCGAACCCTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR GCA 90 bp | CTCAGGGTTCGAAAGCCTTCCCCCTCCACCACCAAAGAAAACATGGCAAGGAGTTACACGTGGATCCTTTaGATGAGTCCTTCATCTTGG | + |
Preference number: 4 (lower is better) Translates to: LRVRKPSPSTTKENMARSYTWIL*MSPSSW Trigger: CCAAGATGAAGGACTCATGCAAAGGATCCACGTGTA...ACTCCTTGCCATGTTTTCTTTGGTGGTGGAGGGGGAAGGCTTTCGAACCCTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | CCAGACAAGAGCCCCATTCATGACATATCTCAAACCTGTATCCTCAGGGTTCGACCAGGCTCGTGGTGTTaGGAAGGAAAAAGGCCTGTA | + |
Preference number: 4 (lower is better) Translates to: PDKSPIHDISQTCILRVRPGSWC*EGKRPV Trigger: TACAGGCCTTTTTCCTTCCCAACACCACGAGCCTGG...TCGAACCCTGAGGATACAGGTTTGAGATATGTCATGAATGGGGCTCTTGTCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | GGAGGCCCAGGACGTTCAATGACACCAAAAGGAAGATTCCTGACTCTCTGTCACGGTACCTGTTACACGTaGATCCTTTGCATGAGTCCT | + |
Preference number: 4 (lower is better) Translates to: GGPGRSMTPKGRFLTLCHGTCYT*ILCMSP Trigger: AGGACTCATGCAAAGGATCCACGTGTAACAGGTACC...GTGACAGAGAGTCAGGAATCTTCCTTTTGGTGTCATTGAACGTCCTGGGCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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3UTR CAA 72 bp | GTACAGACTCACACAGCAAGTTCCCTGAAGATGGGATaGGCTGCTCATTCTAGAAACCCAGAAGGGGTATGG | + |
Preference number: 4 (lower is better) Translates to: VQTHTASSLKMG*AAHSRNPEGVW Trigger: CCATACCCCTTCTGGGTTTCTAGAATGAGCAGCCAATCCCATCTTCAGGGAACTTGCTGTGTGAGTCTGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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CDS-3UTR GCA 90 bp | GGTTTTGTTTCCTCCAGTTTCAAACTATTGATGAAGGTGATCGATCGAGGCTGCGTTGCTCAGACAGCCTaGTGGGCACTGGTACCTGTT | + |
Preference number: 4 (lower is better) Translates to: GFVSSSFKLLMKVIDRGCVAQTA*WALVPV Trigger: AACAGGTACCAGTGCCCAGCAGGCTGTCTGAGCAAC...GCAGCCTCGATCGATCACCTTCATCAATAGTTTGAAACTGGAGGAAACAAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | CACAGCTTAAAAACTAGGTCACCCAAACCAGGGGGAAGTGACGTTCAATTGTCACGATCTTGTTGGTGGTaGCCCAGACCATCTGTGTGT | + |
Preference number: 4 (lower is better) Translates to: HSLKTRSPKPGGSDVQLSRSCWW*PRPSVC Trigger: ACACACAGATGGTCTGGGCCACCACCAACAAGATCG...TGACAATTGAACGTCACTTCCCCCTGGTTTGGGTGACCTAGTTTTTAAGCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | CAACCACAGGCCACTCCATTAACCCCCATGAGGAATGTGCCAGGAATCTACTCCCATGAAGTTGATGACTaGGGTCTTCTTGGTCTTGAT | + |
Preference number: 4 (lower is better) Translates to: QPQATPLTPMRNVPGIYSHEVDD*GLLGLD Trigger: ATCAAGACCAAGAAGACCCCAGTCATCAACTTCATG...GGAGTAGATTCCTGGCACATTCCTCATGGGGGTTAATGGAGTGGCCTGTGGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR GCA 90 bp | GGTTTTGTTTCCTCCAGTTTCAAACTATTGATGAAGGTGATCGATCGAGGCTGCTCGTCGTACCATGACTaGACATGGAACCCAGGAGAG | + |
Preference number: 4 (lower is better) Translates to: GFVSSSFKLLMKVIDRGCSSYHD*TWNPGE Trigger: CTCTCCTGGGTTCCATGTGCAGTCATGGTACGACGA...GCAGCCTCGATCGATCACCTTCATCAATAGTTTGAAACTGGAGGAAACAAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | CCAGACAAGAGCCCCATTCATGACATATCTCAAACCTGTATCCTCAGGGTTCGAGGTACCTGTTACACGTaGATCCTTTGCATGAGTCCT | + |
Preference number: 4 (lower is better) Translates to: PDKSPIHDISQTCILRVRGTCYT*ILCMSP Trigger: AGGACTCATGCAAAGGATCCACGTGTAACAGGTACC...TCGAACCCTGAGGATACAGGTTTGAGATATGTCATGAATGGGGCTCTTGTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | CTCAGGGTTCGAAAGCCTTCCCCCTCCACCACCAAAGAAAACATGGCAAGGAGTCAGCTCGGCATATGCTaGAAGAACTTTCATAAAACA | + |
Preference number: 4 (lower is better) Translates to: LRVRKPSPSTTKENMARSQLGIC*KNFHKT Trigger: TGTTTTATGAAAGTTCTTCCAGCATATGCCGAGCTG...ACTCCTTGCCATGTTTTCTTTGGTGGTGGAGGGGGAAGGCTTTCGAACCCTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR TCA 90 bp | AAACTGTCTCAAACAAATAAACATTTAACCCAACTAGGGGGAGAGATTTGTTCACCATCCCATTCCTGGTaGCATCCACCAGGCCACCTC | + |
Preference number: 4 (lower is better) Translates to: KLSQTNKHLTQLGGEICSPSHSW*HPPGHL Trigger: GAGGTGGCCTGGTGGATGTCACCAGGAATGGGATGG...TGAACAAATCTCTCCCCCTAGTTGGGTTAAATGTTTATTTGTTTGAGACAGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | ATGAGGTCAAGGCCAGCCTGGACTACCATAGTGAAACTGTCTCAAACAAATAAATCATGTGTTCCATGTTaGAGGCAGGGGGATACACCT | + |
Preference number: 4 (lower is better) Translates to: MRSRPAWTTIVKLSQTNKSCVPC*RQGDTP Trigger: AGGTGTATCCCCCTGCCTCCAACATGGAACACATGA...TTTATTTGTTTGAGACAGTTTCACTATGGTAGTCCAGGCTGGCCTTGACCTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | ATGGTAGGGAAGGCTCCTGATGTATTGGTCCTCCATGAGACCAAAGGTCATGTGCAGCTCGGCATATGCTaGAAGAACTTTCATAAAACA | + |
Preference number: 4 (lower is better) Translates to: MVGKAPDVLVLHETKGHVQLGIC*KNFHKT Trigger: TGTTTTATGAAAGTTCTTCCAGCATATGCCGAGCTG...CACATGACCTTTGGTCTCATGGAGGACCAATACATCAGGAGCCTTCCCTACCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR TCA 90 bp | ACAACCAGTGTGGCCCTGTTCATGCGAAGCACAAAAACTTACAATAAACTTTTGCGTGGATCCTTTGCATaGGTCCTTCATCTTGGTGTC | + |
Preference number: 4 (lower is better) Translates to: TTSVALFMRSTKTYNKLLRGSFA*VLHLGV Trigger: GACACCAAGATGAAGGACTCATGCAAAGGATCCACG...CAAAAGTTTATTGTAAGTTTTTGTGCTTCGCATGAACAGGGCCACACTGGTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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CDS-3UTR GCA 90 bp | TCAAGGCCAGCCTGGACTACCATAGTGAAACTGTCTCAAACAAATAAACATTTACTGCATGCTGGTATTTaGTCAGCAGCTTCTCCAGGC | + |
Preference number: 4 (lower is better) Translates to: SRPAWTTIVKLSQTNKHLLHAGI*SAASPG Trigger: GCCTGGAGAAGCTGCTGAGCAAATACCAGCATGCAG...TAAATGTTTATTTGTTTGAGACAGTTTCACTATGGTAGTCCAGGCTGGCCTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | TCAAGGCCAGCCTGGACTACCATAGTGAAACTGTCTCAAACAAATAAACATTTACGATCTTGTTGGTGGTaGCCCAGACCATCTGTGTGT | + |
Preference number: 4 (lower is better) Translates to: SRPAWTTIVKLSQTNKHLRSCWW*PRPSVC Trigger: ACACACAGATGGTCTGGGCCACCACCAACAAGATCG...TAAATGTTTATTTGTTTGAGACAGTTTCACTATGGTAGTCCAGGCTGGCCTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | AAACTGTCTCAAACAAATAAACATTTAACCCAACTAGGGGGAGAGATTTGTTCAAGCCTCCTCCGTAGCTaGATGGACACTCAGAGCAGG | + |
Preference number: 4 (lower is better) Translates to: KLSQTNKHLTQLGGEICSSLLRS*MDTQSR Trigger: CCTGCTCTGAGTGTCCATCCAGCTACGGAGGAGGCT...TGAACAAATCTCTCCCCCTAGTTGGGTTAAATGTTTATTTGTTTGAGACAGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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CDS-3UTR GCA 90 bp | ATGAGGTCAAGGCCAGCCTGGACTACCATAGTGAAACTGTCTCAAACAAATAAATACACGTGGATCCTTTaGATGAGTCCTTCATCTTGG | + |
Preference number: 4 (lower is better) Translates to: MRSRPAWTTIVKLSQTNKYTWIL*MSPSSW Trigger: CCAAGATGAAGGACTCATGCAAAGGATCCACGTGTA...TTTATTTGTTTGAGACAGTTTCACTATGGTAGTCCAGGCTGGCCTTGACCTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | CACAGCTTAAAAACTAGGTCACCCAAACCAGGGGGAAGTGACGTTCAATTGTCACAGCTCGGCATATGCTaGAAGAACTTTCATAAAACA | + |
Preference number: 4 (lower is better) Translates to: HSLKTRSPKPGGSDVQLSQLGIC*KNFHKT Trigger: TGTTTTATGAAAGTTCTTCCAGCATATGCCGAGCTG...TGACAATTGAACGTCACTTCCCCCTGGTTTGGGTGACCTAGTTTTTAAGCTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CCA 90 bp | TCAAGGCCAGCCTGGACTACCATAGTGAAACTGTCTCAAACAAATAAACATTTACAATCCAGTTTCCCTTaGGAGAATAATTGCAGACGA | + |
Preference number: 4 (lower is better) Translates to: SRPAWTTIVKLSQTNKHLQSSFP*ENNCRR Trigger: TCGTCTGCAATTATTCTCCCAAGGGAAACTGGATTG...TAAATGTTTATTTGTTTGAGACAGTTTCACTATGGTAGTCCAGGCTGGCCTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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CDS GCA 90 bp | TGGAACCCAGGAGAGCGGTACCTGCCCCAGTGCACAGCCAGGTTCTaGCCGATGGACCTCAGAAGGCCGGCGGGCCCGTGCTCCCACAGG | + |
Preference number: 5 (lower is better) Translates to: WNPGERYLPQCTARF*PMDLRRPAGPCSHR Trigger: CCTGTGGGAGCACGGGCCCGCCGGCCTTCTGAGGTCCATCGGGCAGAACCTGGCTGTGCACTGGGGCAGGTACCGCTCTCCTGGGTTCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 90 bp | GCTCTTCTCCACAGCGCGCAGGACACTGGATTCTCGGGCAGTGGGTaGCCGGCTTCTCGAAGGGGCACAGCTGTGCGACCGTGGCGTGGC | + |
Preference number: 5 (lower is better) Translates to: ALLHSAQDTGFSGSG*PASRRGTAVRPWRG Trigger: GCCACGCCACGGTCGCACAGCTGTGCCCCTTCGAGAAGCCGGCCACCCACTGCCCGAGAATCCAGTGTCCTGCGCGCTGTGGAGAAGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 90 bp | CAGGAGAGCGGTACCTGCCCCAGTGCACAGCCAGGTTCTGCCCGATaGACCTCAGAAGGCCGGCGGGCCCGTGCTCCCACAGGCATCTAT | + |
Preference number: 5 (lower is better) Translates to: QESGTCPSAQPGSAR*TSEGRRARAPTGIY Trigger: ATAGATGCCTGTGGGAGCACGGGCCCGCCGGCCTTCTGAGGTCCATCGGGCAGAACCTGGCTGTGCACTGGGGCAGGTACCGCTCTCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 90 bp | GATGGCTCTTCTCCACAGCGCGCAGGACACTGGATTCTCGGGCAGTaGGTGGCCGGCTTCTCGAAGGGGCACAGCTGTGCGACCGTGGCG | + |
Preference number: 5 (lower is better) Translates to: DGSSPQRAGHWILGQ*VAGFSKGHSCATVA Trigger: CGCCACGGTCGCACAGCTGTGCCCCTTCGAGAAGCCGGCCACCCACTGCCCGAGAATCCAGTGTCCTGCGCGCTGTGGAGAAGAGCCATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS GCA 90 bp | ACAGCCAGGTTCTGCCCGATGGACCTCAGAAGGCCGGCGGGCCCGTaGTCCCACAGGCATCTATGTGCCCACGCTGCTGCAGATCTCTCT | + |
Preference number: 5 (lower is better) Translates to: TARFCPMDLRRPAGP*SHRHLCAHAAADLS Trigger: AGAGAGATCTGCAGCAGCGTGGGCACATAGATGCCTGTGGGAGCACGGGCCCGCCGGCCTTCTGAGGTCCATCGGGCAGAACCTGGCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS GCA 90 bp | AGTGGGTGCACATGGGGCCTGAGCACCGCTCCCGGCACCGTGGAGTaGACTCGTGGGGGTATGGGTAGGTGTAATCCTTCACCTCGTCGT | + |
Preference number: 5 (lower is better) Translates to: SGCTWGLSTAPGTVE*TRGGMGRCNPSPRR Trigger: ACGACGAGGTGAAGGATTACACCTACCCATACCCCCACGAGTGCACTCCACGGTGCCGGGAGCGGTGCTCAGGCCCCATGTGCACCCACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 90 bp | TGGGTGGCCGGCTTCTCGAAGGGGCACAGCTGTGCGACCGTGGCGTaGCAGTCCACGGCCGTCTCTGTCACTTTTGACACAGTGAAGGAG | + |
Preference number: 5 (lower is better) Translates to: WVAGFSKGHSCATVA*QSTAVSVTFDTVKE Trigger: CTCCTTCACTGTGTCAAAAGTGACAGAGACGGCCGTGGACTGCCACGCCACGGTCGCACAGCTGTGCCCCTTCGAGAAGCCGGCCACCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | CTCATGAGGGGGAAGGTGCTCGGTCACCCTCACCAAAGGCCATGGAGGCCCAGGGCACAGCCGATCTTGTaGGTGGTGGCCCAGACCATC | + |
Preference number: 5 (lower is better) Translates to: LMRGKVLGHPHQRPWRPRAQPIL*VVAQTI Trigger: GATGGTCTGGGCCACCACCAACAAGATCGGCTGTGC...CCTGGGCCTCCATGGCCTTTGGTGAGGGTGACCGAGCACCTTCCCCCTCATGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS TCA 90 bp | TGGAGGCAGGGGGATACACCTGGCCTCGCAGCTTGTTGTGTAGCATaGGGATCTCTTGGCGGTCTGACATGGGGATGGCCCTGCGCACGC | + |
Preference number: 5 (lower is better) Translates to: WRQGDTPGLAACCVA*GSLGGLTWGWPCAR Trigger: GCGTGCGCAGGGCCATCCCCATGTCAGACCGCCAAGAGATCCTCATGCTACACAACAAGCTGCGAGGCCAGGTGTATCCCCCTGCCTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 90 bp | TGCTCGGTGGCAAAGATTGTTCAGGCAGCCTCCTCCGTAGCTGGATaGACACTCAGAGCAGGGACGGCCATGCTTGTAGGGGGCCTCGCC | + |
Preference number: 5 (lower is better) Translates to: CSVAKIVQAASSVAG*TLRAGTAMLVGGLA Trigger: GGCGAGGCCCCCTACAAGCATGGCCGTCCCTGCTCTGAGTGTCCATCCAGCTACGGAGGAGGCTGCCTGAACAATCTTTGCCACCGAGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034282.16 |
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CDS CCA 90 bp | GACATGGGGATGGCCCTGCGCACGCGTGAGTGTGGCTCTGCATGCTaGTATTTGCTCAGCAGCTTCTCCAGGCTCGTGGTGTTGGGAAGG | + |
Preference number: 5 (lower is better) Translates to: DMGMALRTRECGSAC*YLLSSFSRLVVLGR Trigger: CCTTCCCAACACCACGAGCCTGGAGAAGCTGCTGAGCAAATACCAGCATGCAGAGCCACACTCACGCGTGCGCAGGGCCATCCCCATGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 90 bp | GGATACACCTGGCCTCGCAGCTTGTTGTGTAGCATGAGGATCTCTTaGCGGTCTGACATGGGGATGGCCCTGCGCACGCGTGAGTGTGGC | + |
Preference number: 5 (lower is better) Translates to: GYTWPRSLLCSMRIS*RSDMGMALRTRECG Trigger: GCCACACTCACGCGTGCGCAGGGCCATCCCCATGTCAGACCGCCAAGAGATCCTCATGCTACACAACAAGCTGCGAGGCCAGGTGTATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 90 bp | TTCTCGGTGGCAAAGATTGTTCAGGCAGCCTCCTCCGTAGCTGGATaGACACTCAGAGCAGGGACGGCCATGCTTGTAGGGGGCCTCGCC | + |
Preference number: 5 (lower is better) Translates to: FSVAKIVQAASSVAG*TLRAGTAMLVGGLA Trigger: GGCGAGGCCCCCTACAAGCATGGCCGTCCCTGCTCTGAGTGTCCATCCAGCTACGGAGGAGGCTGCCTGAACAATCTTTGCCACCGAGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | CCACCAGGGCAGAGCCCAGGTCTTGCTCGGGGCTTCTCCCTGCAGCCCATCTGTAAGGAGCTAGACGGCTaGTATTTGCTCAGGGACTCC | + |
Preference number: 5 (lower is better) Translates to: PPGQSPGLARGFSLQPICKELDG*YLLRDS Trigger: GGAGTCCCTGAGCAAATACAAGCCGTCTAGCTCCTT...ACAGATGGGCTGCAGGGAGAAGCCCCGAGCAAGACCTGGGCTCTGCCCTGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | CTCCTAAGTGATGGGAGCCAGGGCTCACCACACTCTTGGAGCCTGGGGATGCTGTCTCGGTGGCAAAGATaGTTCAGGCAGCCTCCTCCG | + |
Preference number: 5 (lower is better) Translates to: LLSDGSQGSPHSWSLGMLSRWQR*FRQPPP Trigger: CGGAGGAGGCTGCCTGAACAATCTTTGCCACCGAGA...CAGCATCCCCAGGCTCCAAGAGTGTGGTGAGCCCTGGCTCCCATCACTTAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS TCA 90 bp | CTCGTGGGGGTATGGGTAGGTGTAATCCTTCACCTCGTCGTACCATaGCTGCACATGGAACCCAGGAGAGCGGTACCTGCCCCAGTGCAC | + |
Preference number: 5 (lower is better) Translates to: LVGVWVGVILHLVVP*LHMEPRRAVPAPVH Trigger: GTGCACTGGGGCAGGTACCGCTCTCCTGGGTTCCATGTGCAGTCATGGTACGACGAGGTGAAGGATTACACCTACCCATACCCCCACGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS GCA 90 bp | GGATGGCCCTGCGCACGCGTGAGTGTGGCTCTGCATGCTGGTATTTaGTCAGCAGCTTCTCCAGGCTCGTGGTGTTGGGAAGGAAAAAGG | + |
Preference number: 5 (lower is better) Translates to: GWPCARVSVALHAGI*SAASPGSWCWEGKR Trigger: CCTTTTTCCTTCCCAACACCACGAGCCTGGAGAAGCTGCTGAGCAAATACCAGCATGCAGAGCCACACTCACGCGTGCGCAGGGCCATCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 90 bp | AGACGTTCATGTTCCGACAGGTGTGCACGGCACAGCCGATCTTGTTaGTGGTGGCCCAGACCATCTGTGTGTAGTGGGTGCACATGGGGC | + |
Preference number: 5 (lower is better) Translates to: RRSCSDRCARHSRSC*WWPRPSVCSGCTWG Trigger: GCCCCATGTGCACCCACTACACACAGATGGTCTGGGCCACCACCAACAAGATCGGCTGTGCCGTGCACACCTGTCGGAACATGAACGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 90 bp | TTTCTGCTCGGTGGCAAAGATTGTTCAGGCAGCCTCCTCCGTAGCTaGATGGACACTCAGAGCAGGGACGGCCATGCTTGTAGGGGGCCT | + |
Preference number: 5 (lower is better) Translates to: FLLGGKDCSGSLLRS*MDTQSRDGHACRGP Trigger: AGGCCCCCTACAAGCATGGCCGTCCCTGCTCTGAGTGTCCATCCAGCTACGGAGGAGGCTGCCTGAACAATCTTTGCCACCGAGCAGAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034282.16 |
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CDS CCA 90 bp | GCTTTTCTCGGTGGCAAAGATTGTTCAGGCAGCCTCCTCCGTAGCTaGATGGACACTCAGAGCAGGGACGGCCATGCTTGTAGGGGGCCT | + |
Preference number: 5 (lower is better) Translates to: AFLGGKDCSGSLLRS*MDTQSRDGHACRGP Trigger: AGGCCCCCTACAAGCATGGCCGTCCCTGCTCTGAGTGTCCATCCAGCTACGGAGGAGGCTGCCTGAACAATCTTTGCCACCGAGAAAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | CCACCAGGGCAGAGCCCAGGTCTTGCTCGGGGCTTCTCCCTGCAGCCCATCTGTACTTGGGTCATGAAGTaGATGACTGGGGTCTTCTTG | + |
Preference number: 5 (lower is better) Translates to: PPGQSPGLARGFSLQPICTWVMK*MTGVFL Trigger: CAAGAAGACCCCAGTCATCAACTTCATGACCCAAGT...ACAGATGGGCTGCAGGGAGAAGCCCCGAGCAAGACCTGGGCTCTGCCCTGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | CACCGGCAATCTGCCCCATGCTCAGGACTGGGGTGGGATTCCACCTTCTCTAGAAAGACCTTCGCCTTGTaGCTCAGACAGCCTGCTGGG | + |
Preference number: 5 (lower is better) Translates to: HRQSAPCSGLGWDSTFSRKTFAL*LRQPAG Trigger: CCCAGCAGGCTGTCTGAGCAACAAGGCGAAGGTCTT...TCTAGAGAAGGTGGAATCCCACCCCAGTCCTGAGCATGGGGCAGATTGCCGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS TCA 90 bp | CTGTGCGACCGTGGCGTGGCAGTCCACGGCCGTCTCTGTCACTTTTaGCACAGTGAAGGAGCTAGACGGCTTGTATTTGCTCAGGGACTC | + |
Preference number: 5 (lower is better) Translates to: LCDRGVAVHGRLCHF*HSEGARRLVFAQGL Trigger: GAGTCCCTGAGCAAATACAAGCCGTCTAGCTCCTTCACTGTGTCAAAAGTGACAGAGACGGCCGTGGACTGCCACGCCACGGTCGCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS GCA 90 bp | GCATTCTCCCAAGTGTCTCCCCAGACGTTCATGTTCCGACAGGTGTaGACGGCACAGCCGATCTTGTTGGTGGTGGCCCAGACCATCTGT | + |
Preference number: 5 (lower is better) Translates to: AFSQVSPQTFMFRQV*TAQPILLVVAQTIC Trigger: ACAGATGGTCTGGGCCACCACCAACAAGATCGGCTGTGCCGTGCACACCTGTCGGAACATGAACGTCTGGGGAGACACTTGGGAGAATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | CTTGCAAAGCCAAACCCCAGAGGAGGACACCTAGATCTGCTGAGGGTGGGGCAGTCCAGGCTCGTGGTGTaGGGAAGGAAAAAGGCCTGT | + |
Preference number: 5 (lower is better) Translates to: LAKPNPRGGHLDLLRVGQSRLVV*GRKKAC Trigger: ACAGGCCTTTTTCCTTCCCAACACCACGAGCCTGGA...CTGCCCCACCCTCAGCAGATCTAGGTGTCCTCCTCTGGGGTTTGGCTTTGCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | CAACCACAGGCCACTCCATTAACCCCCATGAGGAATGTGCCAGGAATCTACTCCACGGCACAGCCGATCTaGTTGGTGGTGGCCCAGACC | + |
Preference number: 5 (lower is better) Translates to: QPQATPLTPMRNVPGIYSTAQPI*LVVAQT Trigger: GGTCTGGGCCACCACCAACAAGATCGGCTGTGCCGT...GGAGTAGATTCCTGGCACATTCCTCATGGGGGTTAATGGAGTGGCCTGTGGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | AAGGAGTGTCTCAGTGAGCAGCTCCTGAGAGGAGGTGAGCCACCAGATGGGGACATGACTGGGGTCTTCTaGGTCTTGATCACCCTGGGC | + |
Preference number: 5 (lower is better) Translates to: KECLSEQLLRGGEPPDGDMTGVF*VLITLG Trigger: GCCCAGGGTGATCAAGACCAAGAAGACCCCAGTCAT...GTCCCCATCTGGTGGCTCACCTCCTCTCAGGAGCTGCTCACTGAGACACTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | ACCGGCAATCTGCCCCATGCTCAGGACTGGGGTGGGATTCCACCTTCTCTAGAGATGACTGGGGTCTTCTaGGTCTTGATCACCCTGGGC | + |
Preference number: 5 (lower is better) Translates to: TGNLPHAQDWGGIPPSLEMTGVF*VLITLG Trigger: GCCCAGGGTGATCAAGACCAAGAAGACCCCAGTCAT...CTCTAGAGAAGGTGGAATCCCACCCCAGTCCTGAGCATGGGGCAGATTGCCGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | CTTGCAAAGCCAAACCCCAGAGGAGGACACCTAGATCTGCTGAGGGTGGGGCAGCCAAAGACCTTCGCCTaGTTGCTCAGACAGCCTGCT | + |
Preference number: 5 (lower is better) Translates to: LAKPNPRGGHLDLLRVGQPKTFA*LLRQPA Trigger: AGCAGGCTGTCTGAGCAACAAGGCGAAGGTCTTTGG...CTGCCCCACCCTCAGCAGATCTAGGTGTCCTCCTCTGGGGTTTGGCTTTGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS GCA 90 bp | GAGGGAGCCCACGTAGCTCTTCTTTTTGTCCACGGGCATCACATCTaGATAGCCACCAACCTCGTCAACGATGACACCTGCGTGCACAGC | + |
Preference number: 5 (lower is better) Translates to: EGAHVALLFVHGHHI*IATNLVNDDTCVHS Trigger: GCTGTGCACGCAGGTGTCATCGTTGACGAGGTTGGTGGCTATGCAGATGTGATGCCCGTGGACAAAAAGAAGAGCTACGTGGGCTCCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 90 bp | CTGCATGCTGGTATTTGCTCAGCAGCTTCTCCAGGCTCGTGGTGTTaGGAAGGAAAAAGGCCTGTACTCCACAGACCAGCAGAGCCAGCC | + |
Preference number: 5 (lower is better) Translates to: LHAGICSAASPGSWC*EGKRPVLHRPAEPA Trigger: GGCTGGCTCTGCTGGTCTGTGGAGTACAGGCCTTTTTCCTTCCCAACACCACGAGCCTGGAGAAGCTGCTGAGCAAATACCAGCATGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | CTCAGGGTTCGAAAGCCTTCCCCCTCCACCACCAAAGAAAACATGGCAAGGAGTGCACAGCCGATCTTGTaGGTGGTGGCCCAGACCATC | + |
Preference number: 5 (lower is better) Translates to: LRVRKPSPSTTKENMARSAQPIL*VVAQTI Trigger: GATGGTCTGGGCCACCACCAACAAGATCGGCTGTGC...ACTCCTTGCCATGTTTTCTTTGGTGGTGGAGGGGGAAGGCTTTCGAACCCTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | CAACCACAGGCCACTCCATTAACCCCCATGAGGAATGTGCCAGGAATCTACTCCGCTCGGTGGCAAAGATaGTTCAGGCAGCCTCCTCCG | + |
Preference number: 5 (lower is better) Translates to: QPQATPLTPMRNVPGIYSARWQR*FRQPPP Trigger: CGGAGGAGGCTGCCTGAACAATCTTTGCCACCGAGC...GGAGTAGATTCCTGGCACATTCCTCATGGGGGTTAATGGAGTGGCCTGTGGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034282.16 |
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CDS-3UTR CAA 90 bp | CACCGGCAATCTGCCCCATGCTCAGGACTGGGGTGGGATTCCACCTTCTCTAGAAAGGAGCTAGACGGCTaGTATTTGCTCAGGGACTCC | + |
Preference number: 5 (lower is better) Translates to: HRQSAPCSGLGWDSTFSRKELDG*YLLRDS Trigger: GGAGTCCCTGAGCAAATACAAGCCGTCTAGCTCCTT...TCTAGAGAAGGTGGAATCCCACCCCAGTCCTGAGCATGGGGCAGATTGCCGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 90 bp | GTGGCTCTGCATGCTGGTATTTGCTCAGCAGCTTCTCCAGGCTCGTaGTGTTGGGAAGGAAAAAGGCCTGTACTCCACAGACCAGCAGAG | + |
Preference number: 5 (lower is better) Translates to: VALHAGICSAASPGS*CWEGKRPVLHRPAE Trigger: CTCTGCTGGTCTGTGGAGTACAGGCCTTTTTCCTTCCCAACACCACGAGCCTGGAGAAGCTGCTGAGCAAATACCAGCATGCAGAGCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | GAGGCAGCCCTTATTCTAAGAAGTGAGAAGACATCTGAGACCTGGAGCCTCTTGACGGCACAGCCGATCTaGTTGGTGGTGGCCCAGACC | + |
Preference number: 5 (lower is better) Translates to: EAALILRSEKTSETWSLLTAQPI*LVVAQT Trigger: GGTCTGGGCCACCACCAACAAGATCGGCTGTGCCGT...CAAGAGGCTCCAGGTCTCAGATGTCTTCTCACTTCTTAGAATAAGGGCTGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | CTCCTAAGTGATGGGAGCCAGGGCTCACCACACTCTTGGAGCCTGGGGATGCTGACTTGGGTCATGAAGTaGATGACTGGGGTCTTCTTG | + |
Preference number: 5 (lower is better) Translates to: LLSDGSQGSPHSWSLGMLTWVMK*MTGVFL Trigger: CAAGAAGACCCCAGTCATCAACTTCATGACCCAAGT...CAGCATCCCCAGGCTCCAAGAGTGTGGTGAGCCCTGGCTCCCATCACTTAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | CTCAGGGTTCGAAAGCCTTCCCCCTCCACCACCAAAGAAAACATGGCAAGGAGTAAGACCTTCGCCTTGTaGCTCAGACAGCCTGCTGGG | + |
Preference number: 5 (lower is better) Translates to: LRVRKPSPSTTKENMARSKTFAL*LRQPAG Trigger: CCCAGCAGGCTGTCTGAGCAACAAGGCGAAGGTCTT...ACTCCTTGCCATGTTTTCTTTGGTGGTGGAGGGGGAAGGCTTTCGAACCCTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS TCA 90 bp | TGTCCACGGGCATCACATCTGCATAGCCACCAACCTCGTCAACGATaGCACCTGCGTGCACAGCGGCCTTACAAATGCTGGAAGTATCAG | + |
Preference number: 5 (lower is better) Translates to: CPRASHLHSHQPRQR*HLRAQRPYKCWKYQ Trigger: CTGATACTTCCAGCATTTGTAAGGCCGCTGTGCACGCAGGTGTCATCGTTGACGAGGTTGGTGGCTATGCAGATGTGATGCCCGTGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 90 bp | CTGCAGATCTCTCTAGCTCCTCATCCCAAGTCATGTGTTCCATGTTaGAGGCAGGGGGATACACCTGGCCTCGCAGCTTGTTGTGTAGCA | + |
Preference number: 5 (lower is better) Translates to: LQISLAPHPKSCVPC*RQGDTPGLAACCVA Trigger: TGCTACACAACAAGCTGCGAGGCCAGGTGTATCCCCCTGCCTCCAACATGGAACACATGACTTGGGATGAGGAGCTAGAGAGATCTGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | AAGCCTTCCCCCTCCACCACCAAAGAAAACATGGCAAGGAGTGTCTCAGTGAGCACCTGGCCTCGCAGCTaGTTGTGTAGCATGAGGATC | + |
Preference number: 5 (lower is better) Translates to: KPSPSTTKENMARSVSVSTWPRS*LCSMRI Trigger: GATCCTCATGCTACACAACAAGCTGCGAGGCCAGGT...GCTCACTGAGACACTCCTTGCCATGTTTTCTTTGGTGGTGGAGGGGGAAGGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | CTCAGGGTTCGAAAGCCTTCCCCCTCCACCACCAAAGAAAACATGGCAAGGAGTATGACTGGGGTCTTCTaGGTCTTGATCACCCTGGGC | + |
Preference number: 5 (lower is better) Translates to: LRVRKPSPSTTKENMARSMTGVF*VLITLG Trigger: GCCCAGGGTGATCAAGACCAAGAAGACCCCAGTCAT...ACTCCTTGCCATGTTTTCTTTGGTGGTGGAGGGGGAAGGCTTTCGAACCCTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | AAGGAGTGTCTCAGTGAGCAGCTCCTGAGAGGAGGTGAGCCACCAGATGGGGACACTTGGGTCATGAAGTaGATGACTGGGGTCTTCTTG | + |
Preference number: 5 (lower is better) Translates to: KECLSEQLLRGGEPPDGDTWVMK*MTGVFL Trigger: CAAGAAGACCCCAGTCATCAACTTCATGACCCAAGT...GTCCCCATCTGGTGGCTCACCTCCTCTCAGGAGCTGCTCACTGAGACACTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | CTCCTAAGTGATGGGAGCCAGGGCTCACCACACTCTTGGAGCCTGGGGATGCTGTTACACGTGGATCCTTaGCATGAGTCCTTCATCTTG | + |
Preference number: 5 (lower is better) Translates to: LLSDGSQGSPHSWSLGMLLHVDP*HESFIL Trigger: CAAGATGAAGGACTCATGCAAAGGATCCACGTGTAA...CAGCATCCCCAGGCTCCAAGAGTGTGGTGAGCCCTGGCTCCCATCACTTAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 90 bp | AGTATCAGCATAGATGTTGGTTCCATACACAGGAGCCCAATAGGATaGCTCTTCTCCACAGCGCGCAGGACACTGGATTCTCGGGCAGTG | + |
Preference number: 5 (lower is better) Translates to: SISIDVGSIHRSPIG*LFSTARRTLDSRAV Trigger: CACTGCCCGAGAATCCAGTGTCCTGCGCGCTGTGGAGAAGAGCCATCCTATTGGGCTCCTGTGTATGGAACCAACATCTATGCTGATACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | CCATGGAGGCCCAGGACGTTCAATGACACCAAAAGGAAGATTCCTGACTCTCTGTCCAGGCTCGTGGTGTaGGGAAGGAAAAAGGCCTGT | + |
Preference number: 5 (lower is better) Translates to: PWRPRTFNDTKRKIPDSLSRLVV*GRKKAC Trigger: ACAGGCCTTTTTCCTTCCCAACACCACGAGCCTGGA...CAGAGAGTCAGGAATCTTCCTTTTGGTGTCATTGAACGTCCTGGGCCTCCATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | TACTTTGCTCCTGTGAATGTGTGTGGTGCCTGTGGAGACCAGAGATCTCTTGAAGCACAGCCGATCTTGTaGGTGGTGGCCCAGACCATC | + |
Preference number: 5 (lower is better) Translates to: YFAPVNVCGACGDQRSLEAQPIL*VVAQTI Trigger: GATGGTCTGGGCCACCACCAACAAGATCGGCTGTGC...TTCAAGAGATCTCTGGTCTCCACAGGCACCACACACATTCACAGGAGCAAAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | CACAGCTTAAAAACTAGGTCACCCAAACCAGGGGGAAGTGACGTTCAATTGTCAACGGCACAGCCGATCTaGTTGGTGGTGGCCCAGACC | + |
Preference number: 5 (lower is better) Translates to: HSLKTRSPKPGGSDVQLSTAQPI*LVVAQT Trigger: GGTCTGGGCCACCACCAACAAGATCGGCTGTGCCGT...TGACAATTGAACGTCACTTCCCCCTGGTTTGGGTGACCTAGTTTTTAAGCTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | CAACCACAGGCCACTCCATTAACCCCCATGAGGAATGTGCCAGGAATCTACTCCCTAGACGGCTTGTATTaGCTCAGGGACTCCATGCCA | + |
Preference number: 5 (lower is better) Translates to: QPQATPLTPMRNVPGIYSLDGLY*LRDSMP Trigger: TGGCATGGAGTCCCTGAGCAAATACAAGCCGTCTAG...GGAGTAGATTCCTGGCACATTCCTCATGGGGGTTAATGGAGTGGCCTGTGGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | GAGGCAGCCCTTATTCTAAGAAGTGAGAAGACATCTGAGACCTGGAGCCTCTTGTCTCGGTGGCAAAGATaGTTCAGGCAGCCTCCTCCG | + |
Preference number: 5 (lower is better) Translates to: EAALILRSEKTSETWSLLSRWQR*FRQPPP Trigger: CGGAGGAGGCTGCCTGAACAATCTTTGCCACCGAGA...CAAGAGGCTCCAGGTCTCAGATGTCTTCTCACTTCTTAGAATAAGGGCTGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS TCA 90 bp | ACAGCCTGCTGGGCACTGGTACCTGTTACACGTGGATCCTTTGCATaGGTCCTTCATCTTGGTGTCACAGTGGACCACTTGGGTCATGAA | + |
Preference number: 5 (lower is better) Translates to: TACWALVPVTRGSFA*VLHLGVTVDHLGHE Trigger: TTCATGACCCAAGTGGTCCACTGTGACACCAAGATGAAGGACTCATGCAAAGGATCCACGTGTAACAGGTACCAGTGCCCAGCAGGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | AAGCCTTCCCCCTCCACCACCAAAGAAAACATGGCAAGGAGTGTCTCAGTGAGCCATGAGTCCTTCATCTaGGTGTCACAGTGGACCACT | + |
Preference number: 5 (lower is better) Translates to: KPSPSTTKENMARSVSVSHESFI*VSQWTT Trigger: AGTGGTCCACTGTGACACCAAGATGAAGGACTCATG...GCTCACTGAGACACTCCTTGCCATGTTTTCTTTGGTGGTGGAGGGGGAAGGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | CCCAGAAGGGGTATGGTTTTCCTTACCACGTCAGCCTTGCCCTGCTGGCTTGGTTTACACGTGGATCCTTaGCATGAGTCCTTCATCTTG | + |
Preference number: 5 (lower is better) Translates to: PRRGMVFLTTSALPCWLGLHVDP*HESFIL Trigger: CAAGATGAAGGACTCATGCAAAGGATCCACGTGTAA...ACCAAGCCAGCAGGGCAAGGCTGACGTGGTAAGGAAAACCATACCCCTTCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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CDS CCA 90 bp | CGTGCACAGCGGCCTTACAAATGCTGGAAGTATCAGCATAGATGTTaGTTCCATACACAGGAGCCCAATAGGATGGCTCTTCTCCACAGC | + |
Preference number: 5 (lower is better) Translates to: RAQRPYKCWKYQHRC*FHTQEPNRMALLHS Trigger: GCTGTGGAGAAGAGCCATCCTATTGGGCTCCTGTGTATGGAACCAACATCTATGCTGATACTTCCAGCATTTGTAAGGCCGCTGTGCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | CACAGCTTAAAAACTAGGTCACCCAAACCAGGGGGAAGTGACGTTCAATTGTCAAAGACCTTCGCCTTGTaGCTCAGACAGCCTGCTGGG | + |
Preference number: 5 (lower is better) Translates to: HSLKTRSPKPGGSDVQLSKTFAL*LRQPAG Trigger: CCCAGCAGGCTGTCTGAGCAACAAGGCGAAGGTCTT...TGACAATTGAACGTCACTTCCCCCTGGTTTGGGTGACCTAGTTTTTAAGCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | ACAGAAGCATGCTTCATTTTACAGTGGGTTTGGACCAGGCTCCTAAGTGATGGGCCAAAGACCTTCGCCTaGTTGCTCAGACAGCCTGCT | + |
Preference number: 5 (lower is better) Translates to: TEACFILQWVWTRLLSDGPKTFA*LLRQPA Trigger: AGCAGGCTGTCTGAGCAACAAGGCGAAGGTCTTTGG...CCCATCACTTAGGAGCCTGGTCCAAACCCACTGTAAAATGAAGCATGCTTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | GAGGCAGCCCTTATTCTAAGAAGTGAGAAGACATCTGAGACCTGGAGCCTCTTGCTAGACGGCTTGTATTaGCTCAGGGACTCCATGCCA | + |
Preference number: 5 (lower is better) Translates to: EAALILRSEKTSETWSLLLDGLY*LRDSMP Trigger: TGGCATGGAGTCCCTGAGCAAATACAAGCCGTCTAG...CAAGAGGCTCCAGGTCTCAGATGTCTTCTCACTTCTTAGAATAAGGGCTGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | GAGGCAGCCCTTATTCTAAGAAGTGAGAAGACATCTGAGACCTGGAGCCTCTTGAAGGAGCTAGACGGCTaGTATTTGCTCAGGGACTCC | + |
Preference number: 5 (lower is better) Translates to: EAALILRSEKTSETWSLLKELDG*YLLRDS Trigger: GGAGTCCCTGAGCAAATACAAGCCGTCTAGCTCCTT...CAAGAGGCTCCAGGTCTCAGATGTCTTCTCACTTCTTAGAATAAGGGCTGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | CACAGCTTAAAAACTAGGTCACCCAAACCAGGGGGAAGTGACGTTCAATTGTCAACCTGGCCTCGCAGCTaGTTGTGTAGCATGAGGATC | + |
Preference number: 5 (lower is better) Translates to: HSLKTRSPKPGGSDVQLSTWPRS*LCSMRI Trigger: GATCCTCATGCTACACAACAAGCTGCGAGGCCAGGT...TGACAATTGAACGTCACTTCCCCCTGGTTTGGGTGACCTAGTTTTTAAGCTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | ATGGTAGGGAAGGCTCCTGATGTATTGGTCCTCCATGAGACCAAAGGTCATGTGCATGAGTCCTTCATCTaGGTGTCACAGTGGACCACT | + |
Preference number: 5 (lower is better) Translates to: MVGKAPDVLVLHETKGHVHESFI*VSQWTT Trigger: AGTGGTCCACTGTGACACCAAGATGAAGGACTCATG...CACATGACCTTTGGTCTCATGGAGGACCAATACATCAGGAGCCTTCCCTACCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | CACAGCTTAAAAACTAGGTCACCCAAACCAGGGGGAAGTGACGTTCAATTGTCACCAAAGACCTTCGCCTaGTTGCTCAGACAGCCTGCT | + |
Preference number: 5 (lower is better) Translates to: HSLKTRSPKPGGSDVQLSPKTFA*LLRQPA Trigger: AGCAGGCTGTCTGAGCAACAAGGCGAAGGTCTTTGG...TGACAATTGAACGTCACTTCCCCCTGGTTTGGGTGACCTAGTTTTTAAGCTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | TACTTTGCTCCTGTGAATGTGTGTGGTGCCTGTGGAGACCAGAGATCTCTTGAACTAGACGGCTTGTATTaGCTCAGGGACTCCATGCCA | + |
Preference number: 5 (lower is better) Translates to: YFAPVNVCGACGDQRSLELDGLY*LRDSMP Trigger: TGGCATGGAGTCCCTGAGCAAATACAAGCCGTCTAG...TTCAAGAGATCTCTGGTCTCCACAGGCACCACACACATTCACAGGAGCAAAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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CDS TCA 90 bp | GAGCTAGACGGCTTGTATTTGCTCAGGGACTCCATGCCATTTTTCTaGGACTTGACAAAGAAGGGTACCATCCCATTCCTGGTGACATCC | + |
Preference number: 5 (lower is better) Translates to: ELDGLYLLRDSMPFF*DLTKKGTIPFLVTS Trigger: GGATGTCACCAGGAATGGGATGGTACCCTTCTTTGTCAAGTCTCAGAAAAATGGCATGGAGTCCCTGAGCAAATACAAGCCGTCTAGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 90 bp | GATCCTTTGCATGAGTCCTTCATCTTGGTGTCACAGTGGACCACTTaGGTCATGAAGTTGATGACTGGGGTCTTCTTGGTCTTGATCACC | + |
Preference number: 5 (lower is better) Translates to: DPLHESFILVSQWTT*VMKLMTGVFLVLIT Trigger: GGTGATCAAGACCAAGAAGACCCCAGTCATCAACTTCATGACCCAAGTGGTCCACTGTGACACCAAGATGAAGGACTCATGCAAAGGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 90 bp | TTACACGTGGATCCTTTGCATGAGTCCTTCATCTTGGTGTCACAGTaGACCACTTGGGTCATGAAGTTGATGACTGGGGTCTTCTTGGTC | + |
Preference number: 5 (lower is better) Translates to: LHVDPLHESFILVSQ*TTWVMKLMTGVFLV Trigger: GACCAAGAAGACCCCAGTCATCAACTTCATGACCCAAGTGGTCCACTGTGACACCAAGATGAAGGACTCATGCAAAGGATCCACGTGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | GGAGGCCCAGGACGTTCAATGACACCAAAAGGAAGATTCCTGACTCTCTGTCACTTACACGTGGATCCTTaGCATGAGTCCTTCATCTTG | + |
Preference number: 5 (lower is better) Translates to: GGPGRSMTPKGRFLTLCHLHVDP*HESFIL Trigger: CAAGATGAAGGACTCATGCAAAGGATCCACGTGTAA...GTGACAGAGAGTCAGGAATCTTCCTTTTGGTGTCATTGAACGTCCTGGGCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | ATGAGGTCAAGGCCAGCCTGGACTACCATAGTGAAACTGTCTCAAACAAATAAATCCAGGCTCGTGGTGTaGGGAAGGAAAAAGGCCTGT | + |
Preference number: 5 (lower is better) Translates to: MRSRPAWTTIVKLSQTNKSRLVV*GRKKAC Trigger: ACAGGCCTTTTTCCTTCCCAACACCACGAGCCTGGA...TTTATTTGTTTGAGACAGTTTCACTATGGTAGTCCAGGCTGGCCTTGACCTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132583.8 |
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CDS-3UTR CAA 90 bp | CACAGCTTAAAAACTAGGTCACCCAAACCAGGGGGAAGTGACGTTCAATTGTCACATGAGTCCTTCATCTaGGTGTCACAGTGGACCACT | + |
Preference number: 5 (lower is better) Translates to: HSLKTRSPKPGGSDVQLSHESFI*VSQWTT Trigger: AGTGGTCCACTGTGACACCAAGATGAAGGACTCATG...TGACAATTGAACGTCACTTCCCCCTGGTTTGGGTGACCTAGTTTTTAAGCTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS GCA 72 bp | GGAGAGCGGTACCTGCCCCAGTGCACAGCCAGGTTCTaGCCGATGGACCTCAGAAGGCCGGCGGGCCCGTGC | + |
Preference number: 6 (lower is better) Translates to: GERYLPQCTARF*PMDLRRPAGPC Trigger: GCACGGGCCCGCCGGCCTTCTGAGGTCCATCGGGCAGAACCTGGCTGTGCACTGGGGCAGGTACCGCTCTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS GCA 72 bp | GCAGTGGGTGGCCGGCTTCTCGAAGGGGCACAGCTGTaGGACCGTGGCGTGGCAGTCCACGGCCGTCTCTGT | + |
Preference number: 6 (lower is better) Translates to: AVGGRLLEGAQL*DRGVAVHGRLC Trigger: ACAGAGACGGCCGTGGACTGCCACGCCACGGTCGCACAGCTGTGCCCCTTCGAGAAGCCGGCCACCCACTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 72 bp | GGTACCTGCCCCAGTGCACAGCCAGGTTCTGCCCGATaGACCTCAGAAGGCCGGCGGGCCCGTGCTCCCACA | + |
Preference number: 6 (lower is better) Translates to: GTCPSAQPGSAR*TSEGRRARAPT Trigger: TGTGGGAGCACGGGCCCGCCGGCCTTCTGAGGTCCATCGGGCAGAACCTGGCTGTGCACTGGGGCAGGTACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 72 bp | CACAGCGCGCAGGACACTGGATTCTCGGGCAGTGGGTaGCCGGCTTCTCGAAGGGGCACAGCTGTGCGACCG | + |
Preference number: 6 (lower is better) Translates to: HSAQDTGFSGSG*PASRRGTAVRP Trigger: CGGTCGCACAGCTGTGCCCCTTCGAGAAGCCGGCCACCCACTGCCCGAGAATCCAGTGTCCTGCGCGCTGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS GCA 72 bp | TTCTGCCCGATGGACCTCAGAAGGCCGGCGGGCCCGTaGTCCCACAGGCATCTATGTGCCCACGCTGCTGCA | + |
Preference number: 6 (lower is better) Translates to: FCPMDLRRPAGP*SHRHLCAHAAA Trigger: TGCAGCAGCGTGGGCACATAGATGCCTGTGGGAGCACGGGCCCGCCGGCCTTCTGAGGTCCATCGGGCAGAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 72 bp | TGGTGGCCCAGACCATCTGTGTGTAGTGGGTGCACATaGGGCCTGAGCACCGCTCCCGGCACCGTGGAGTGC | + |
Preference number: 6 (lower is better) Translates to: WWPRPSVCSGCT*GLSTAPGTVEC Trigger: GCACTCCACGGTGCCGGGAGCGGTGCTCAGGCCCCATGTGCACCCACTACACACAGATGGTCTGGGCCACCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 72 bp | TCTCCACAGCGCGCAGGACACTGGATTCTCGGGCAGTaGGTGGCCGGCTTCTCGAAGGGGCACAGCTGTGCG | + |
Preference number: 6 (lower is better) Translates to: SPQRAGHWILGQ*VAGFSKGHSCA Trigger: CGCACAGCTGTGCCCCTTCGAGAAGCCGGCCACCCACTGCCCGAGAATCCAGTGTCCTGCGCGCTGTGGAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 72 bp | TGGCCGGCTTCTCGAAGGGGCACAGCTGTGCGACCGTaGCGTGGCAGTCCACGGCCGTCTCTGTCACTTTTG | + |
Preference number: 6 (lower is better) Translates to: WPASRRGTAVRP*RGSPRPSLSLL Trigger: CAAAAGTGACAGAGACGGCCGTGGACTGCCACGCCACGGTCGCACAGCTGTGCCCCTTCGAGAAGCCGGCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS GCA 72 bp | ACATGGGGCCTGAGCACCGCTCCCGGCACCGTGGAGTaGACTCGTGGGGGTATGGGTAGGTGTAATCCTTCA | + |
Preference number: 6 (lower is better) Translates to: TWGLSTAPGTVE*TRGGMGRCNPS Trigger: TGAAGGATTACACCTACCCATACCCCCACGAGTGCACTCCACGGTGCCGGGAGCGGTGCTCAGGCCCCATGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 72 bp | GGCTTCTCGAAGGGGCACAGCTGTGCGACCGTGGCGTaGCAGTCCACGGCCGTCTCTGTCACTTTTGACACA | + |
Preference number: 6 (lower is better) Translates to: GFSKGHSCATVA*QSTAVSVTFDT Trigger: TGTGTCAAAAGTGACAGAGACGGCCGTGGACTGCCACGCCACGGTCGCACAGCTGTGCCCCTTCGAGAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS TCA 72 bp | TGCCTGACGGCGAAGATCCGGAAGGCGTTTCCGTTCTaGGGAGTGTTCAGGCTCTCCGACTGCACCCCGTTC | + |
Preference number: 6 (lower is better) Translates to: CLTAKIRKAFPF*GVFRLSDCTPF Trigger: GAACGGGGTGCAGTCGGAGAGCCTGAACACTCCTCAGAACGGAAACGCCTTCCGGATCTTCGCCGTCAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 72 bp | TGGCCTCGCAGCTTGTTGTGTAGCATGAGGATCTCTTaGCGGTCTGACATGGGGATGGCCCTGCGCACGCGT | + |
Preference number: 6 (lower is better) Translates to: WPRSLLCSMRIS*RSDMGMALRTR Trigger: ACGCGTGCGCAGGGCCATCCCCATGTCAGACCGCCAAGAGATCCTCATGCTACACAACAAGCTGCGAGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS TCA 72 bp | GGGGATACACCTGGCCTCGCAGCTTGTTGTGTAGCATaGGGATCTCTTGGCGGTCTGACATGGGGATGGCCC | + |
Preference number: 6 (lower is better) Translates to: GDTPGLAACCVA*GSLGGLTWGWP Trigger: GGGCCATCCCCATGTCAGACCGCCAAGAGATCCTCATGCTACACAACAAGCTGCGAGGCCAGGTGTATCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS GCA 72 bp | CAAGTGTCTCCCCAGACGTTCATGTTCCGACAGGTGTaGACGGCACAGCCGATCTTGTTGGTGGTGGCCCAG | + |
Preference number: 6 (lower is better) Translates to: QVSPQTFMFRQV*TAQPILLVVAQ Trigger: CTGGGCCACCACCAACAAGATCGGCTGTGCCGTGCACACCTGTCGGAACATGAACGTCTGGGGAGACACTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 72 bp | GACAGGTGTGCACGGCACAGCCGATCTTGTTGGTGGTaGCCCAGACCATCTGTGTGTAGTGGGTGCACATGG | + |
Preference number: 6 (lower is better) Translates to: DRCARHSRSCWW*PRPSVCSGCTW Trigger: CCATGTGCACCCACTACACACAGATGGTCTGGGCCACCACCAACAAGATCGGCTGTGCCGTGCACACCTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 72 bp | TCCGACAGGTGTGCACGGCACAGCCGATCTTGTTGGTaGTGGCCCAGACCATCTGTGTGTAGTGGGTGCACA | + |
Preference number: 6 (lower is better) Translates to: SDRCARHSRSCW*WPRPSVCSGCT Trigger: TGTGCACCCACTACACACAGATGGTCTGGGCCACCACCAACAAGATCGGCTGTGCCGTGCACACCTGTCGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 72 bp | TGTTCCGACAGGTGTGCACGGCACAGCCGATCTTGTTaGTGGTGGCCCAGACCATCTGTGTGTAGTGGGTGC | + |
Preference number: 6 (lower is better) Translates to: CSDRCARHSRSC*WWPRPSVCSGC Trigger: GCACCCACTACACACAGATGGTCTGGGCCACCACCAACAAGATCGGCTGTGCCGTGCACACCTGTCGGAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CAA 72 bp | CTGCGCACGCGTGAGTGTGGCTCTGCATGCTGGTATTaGCTCAGCAGCTTCTCCAGGCTCGTGGTGTTGGGA | + |
Preference number: 6 (lower is better) Translates to: LRTRECGSACWY*LSSFSRLVVLG Trigger: TCCCAACACCACGAGCCTGGAGAAGCTGCTGAGCAAATACCAGCATGCAGAGCCACACTCACGCGTGCGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS TCA 72 bp | ATGACTGGGGTCTTCTTGGTCTTGATCACCCTGGGCTaGACCCAGACATGGGTTTCCTCTGGAGCAGGGGGC | + |
Preference number: 6 (lower is better) Translates to: MTGVFLVLITLG*TQTWVSSGAGG Trigger: GCCCCCTGCTCCAGAGGAAACCCATGTCTGGGTTCAGCCCAGGGTGATCAAGACCAAGAAGACCCCAGTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS GCA 72 bp | TGCGCACGCGTGAGTGTGGCTCTGCATGCTGGTATTTaGTCAGCAGCTTCTCCAGGCTCGTGGTGTTGGGAA | + |
Preference number: 6 (lower is better) Translates to: CARVSVALHAGI*SAASPGSWCWE Trigger: TTCCCAACACCACGAGCCTGGAGAAGCTGCTGAGCAAATACCAGCATGCAGAGCCACACTCACGCGTGCGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 72 bp | GGTGGCAAAGATTGTTCAGGCAGCCTCCTCCGTAGCTaGATGGACACTCAGAGCAGGGACGGCCATGCTTGT | + |
Preference number: 6 (lower is better) Translates to: GGKDCSGSLLRS*MDTQSRDGHAC Trigger: ACAAGCATGGCCGTCCCTGCTCTGAGTGTCCATCCAGCTACGGAGGAGGCTGCCTGAACAATCTTTGCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CAA 72 bp | ATGTTGGAGGCAGGGGGATACACCTGGCCTCGCAGCTaGTTGTGTAGCATGAGGATCTCTTGGCGGTCTGAC | + |
Preference number: 6 (lower is better) Translates to: MLEAGGYTWPRS*LCSMRISWRSD Trigger: GTCAGACCGCCAAGAGATCCTCATGCTACACAACAAGCTGCGAGGCCAGGTGTATCCCCCTGCCTCCAACAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CAA 90 bp | TCTGCATGCTGGTATTTGCTCAGCAGCTTCTCCAGGCTCGTGGTGTaGGGAAGGAAAAAGGCCTGTACTCCACAGACCAGCAGAGCCAGC | + |
Preference number: 6 (lower is better) Translates to: SACWYLLSSFSRLVV*GRKKACTPQTSRAS Trigger: GCTGGCTCTGCTGGTCTGTGGAGTACAGGCCTTTTTCCTTCCCAACACCACGAGCCTGGAGAAGCTGCTGAGCAAATACCAGCATGCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CAA 90 bp | GCTGCAGATCTCTCTAGCTCCTCATCCCAAGTCATGTGTTCCATGTaGGAGGCAGGGGGATACACCTGGCCTCGCAGCTTGTTGTGTAGC | + |
Preference number: 6 (lower is better) Translates to: AADLSSSSSQVMCSM*EAGGYTWPRSLLCS Trigger: GCTACACAACAAGCTGCGAGGCCAGGTGTATCCCCCTGCCTCCAACATGGAACACATGACTTGGGATGAGGAGCTAGAGAGATCTGCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS TCA 72 bp | GTATGGGTAGGTGTAATCCTTCACCTCGTCGTACCATaGCTGCACATGGAACCCAGGAGAGCGGTACCTGCC | + |
Preference number: 6 (lower is better) Translates to: VWVGVILHLVVP*LHMEPRRAVPA Trigger: GGCAGGTACCGCTCTCCTGGGTTCCATGTGCAGTCATGGTACGACGAGGTGAAGGATTACACCTACCCATAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 72 bp | TCTCTAGCTCCTCATCCCAAGTCATGTGTTCCATGTTaGAGGCAGGGGGATACACCTGGCCTCGCAGCTTGT | + |
Preference number: 6 (lower is better) Translates to: SLAPHPKSCVPC*RQGDTPGLAAC Trigger: ACAAGCTGCGAGGCCAGGTGTATCCCCCTGCCTCCAACATGGAACACATGACTTGGGATGAGGAGCTAGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 72 bp | ACCTTCGCCTTGTTGCTCAGACAGCCTGCTGGGCACTaGTACCTGTTACACGTGGATCCTTTGCATGAGTCC | + |
Preference number: 6 (lower is better) Translates to: TFALLLRQPAGH*YLLHVDPLHES Trigger: GGACTCATGCAAAGGATCCACGTGTAACAGGTACCAGTGCCCAGCAGGCTGTCTGAGCAACAAGGCGAAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 72 bp | GCCAAAGACCTTCGCCTTGTTGCTCAGACAGCCTGCTaGGCACTGGTACCTGTTACACGTGGATCCTTTGCA | + |
Preference number: 6 (lower is better) Translates to: AKDLRLVAQTAC*ALVPVTRGSFA Trigger: TGCAAAGGATCCACGTGTAACAGGTACCAGTGCCCAGCAGGCTGTCTGAGCAACAAGGCGAAGGTCTTTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 72 bp | GGTATTTGCTCAGCAGCTTCTCCAGGCTCGTGGTGTTaGGAAGGAAAAAGGCCTGTACTCCACAGACCAGCA | + |
Preference number: 6 (lower is better) Translates to: GICSAASPGSWC*EGKRPVLHRPA Trigger: TGCTGGTCTGTGGAGTACAGGCCTTTTTCCTTCCCAACACCACGAGCCTGGAGAAGCTGCTGAGCAAATACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CAA 72 bp | TGGTATTTGCTCAGCAGCTTCTCCAGGCTCGTGGTGTaGGGAAGGAAAAAGGCCTGTACTCCACAGACCAGC | + |
Preference number: 6 (lower is better) Translates to: WYLLSSFSRLVV*GRKKACTPQTS Trigger: GCTGGTCTGTGGAGTACAGGCCTTTTTCCTTCCCAACACCACGAGCCTGGAGAAGCTGCTGAGCAAATACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CAA 72 bp | CCTGCTGGGCACTGGTACCTGTTACACGTGGATCCTTaGCATGAGTCCTTCATCTTGGTGTCACAGTGGACC | + |
Preference number: 6 (lower is better) Translates to: PAGHWYLLHVDP*HESFILVSQWT Trigger: GGTCCACTGTGACACCAAGATGAAGGACTCATGCAAAGGATCCACGTGTAACAGGTACCAGTGCCCAGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS GCA 72 bp | CTGCTGGGCACTGGTACCTGTTACACGTGGATCCTTTaGATGAGTCCTTCATCTTGGTGTCACAGTGGACCA | + |
Preference number: 6 (lower is better) Translates to: LLGTGTCYTWIL*MSPSSWCHSGP Trigger: TGGTCCACTGTGACACCAAGATGAAGGACTCATGCAAAGGATCCACGTGTAACAGGTACCAGTGCCCAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS GCA 72 bp | CACGTAGCTCTTCTTTTTGTCCACGGGCATCACATCTaGATAGCCACCAACCTCGTCAACGATGACACCTGC | + |
Preference number: 6 (lower is better) Translates to: HVALLFVHGHHI*IATNLVNDDTC Trigger: GCAGGTGTCATCGTTGACGAGGTTGGTGGCTATGCAGATGTGATGCCCGTGGACAAAAAGAAGAGCTACGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 72 bp | AGGGGGCGATTCCACCTCGTTCATCATATCCACCTCTaGTTTATGCTTGTGAGGCTTTTCTGCTCGGTGGCA | + |
Preference number: 6 (lower is better) Translates to: RGRFHLVHHIHL*FMLVRLFCSVA Trigger: TGCCACCGAGCAGAAAAGCCTCACAAGCATAAACCAGAGGTGGATATGATGAACGAGGTGGAATCGCCCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034282.16 |
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CDS CCA 72 bp | GTCACAGTGGACCACTTGGGTCATGAAGTTGATGACTaGGGTCTTCTTGGTCTTGATCACCCTGGGCTGAAC | + |
Preference number: 6 (lower is better) Translates to: VTVDHLGHEVDD*GLLGLDHPGLN Trigger: GTTCAGCCCAGGGTGATCAAGACCAAGAAGACCCCAGTCATCAACTTCATGACCCAAGTGGTCCACTGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS TCA 72 bp | TGGGCACTGGTACCTGTTACACGTGGATCCTTTGCATaGGTCCTTCATCTTGGTGTCACAGTGGACCACTTG | + |
Preference number: 6 (lower is better) Translates to: WALVPVTRGSFA*VLHLGVTVDHL Trigger: CAAGTGGTCCACTGTGACACCAAGATGAAGGACTCATGCAAAGGATCCACGTGTAACAGGTACCAGTGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS GCA 72 bp | CATATCCACCTCTGGTTTATGCTTGTGAGGCTTTTCTaGTCGGTGGCAAAGATTGTTCAGGCAGCCTCCTCC | + |
Preference number: 6 (lower is better) Translates to: HIHLWFMLVRLF*SVAKIVQAASS Trigger: GGAGGAGGCTGCCTGAACAATCTTTGCCACCGAGCAGAAAAGCCTCACAAGCATAAACCAGAGGTGGATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034282.16 |
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CDS CCA 72 bp | ATAGATGTTGGTTCCATACACAGGAGCCCAATAGGATaGCTCTTCTCCACAGCGCGCAGGACACTGGATTCT | + |
Preference number: 6 (lower is better) Translates to: IDVGSIHRSPIG*LFSTARRTLDS Trigger: AGAATCCAGTGTCCTGCGCGCTGTGGAGAAGAGCCATCCTATTGGGCTCCTGTGTATGGAACCAACATCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CAA 90 bp | CACTGGTACCTGTTACACGTGGATCCTTTGCATGAGTCCTTCATCTaGGTGTCACAGTGGACCACTTGGGTCATGAAGTTGATGACTGGG | + |
Preference number: 6 (lower is better) Translates to: HWYLLHVDPLHESFI*VSQWTTWVMKLMTG Trigger: CCCAGTCATCAACTTCATGACCCAAGTGGTCCACTGTGACACCAAGATGAAGGACTCATGCAAAGGATCCACGTGTAACAGGTACCAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CAA 72 bp | ATCTTGGTGTCACAGTGGACCACTTGGGTCATGAAGTaGATGACTGGGGTCTTCTTGGTCTTGATCACCCTG | + |
Preference number: 6 (lower is better) Translates to: ILVSQWTTWVMK*MTGVFLVLITL Trigger: CAGGGTGATCAAGACCAAGAAGACCCCAGTCATCAACTTCATGACCCAAGTGGTCCACTGTGACACCAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CAA 72 bp | CTGTTACACGTGGATCCTTTGCATGAGTCCTTCATCTaGGTGTCACAGTGGACCACTTGGGTCATGAAGTTG | + |
Preference number: 6 (lower is better) Translates to: LLHVDPLHESFI*VSQWTTWVMKL Trigger: CAACTTCATGACCCAAGTGGTCCACTGTGACACCAAGATGAAGGACTCATGCAAAGGATCCACGTGTAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS TCA 72 bp | GGCTTGTATTTGCTCAGGGACTCCATGCCATTTTTCTaGGACTTGACAAAGAAGGGTACCATCCCATTCCTG | + |
Preference number: 6 (lower is better) Translates to: GLYLLRDSMPFF*DLTKKGTIPFL Trigger: CAGGAATGGGATGGTACCCTTCTTTGTCAAGTCTCAGAAAAATGGCATGGAGTCCCTGAGCAAATACAAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |
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CDS CCA 72 bp | CGGCCTTACAAATGCTGGAAGTATCAGCATAGATGTTaGTTCCATACACAGGAGCCCAATAGGATGGCTCTT | + |
Preference number: 6 (lower is better) Translates to: RPYKCWKYQHRC*FHTQEPNRMAL Trigger: AAGAGCCATCCTATTGGGCTCCTGTGTATGGAACCAACATCTATGCTGATACTTCCAGCATTTGTAAGGCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034282.16 ENSMUST00000108972.4 ENSMUST00000132583.8 |