Pregenerated sensors for CRISPLD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025776Ensembl transcript IDs: ENSMUST00000095075.5, ENSMUST00000159958.8, ENSMUST00000160305.8
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTCCAGGAAGAAGAGTTCCCAGAACACAGAGGATGAAAGACACATaGAACCACGCACACACATGCAGGAAAGTTACGATTAAACACTTG | + |
|
Preference number: 1 (lower is better) Translates to: SPGRRVPRTQRMKDT*NHAHTCRKVTIKHL Trigger: CAAGTGTTTAATCGTAACTTTCCTGCATGTGTGTGCGTGGTTGCATGTGTCTTTCATCCTCTGTGTTCTGGGAACTCTTCTTCCTGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095075.5 |
||
| 3UTR CCA 90 bp | TCTTCTGTACAGCAATGTTACAGTTGTATACAGACATCAGAAATGTaGCATTTGGAGCAGGCTTTCTGTTACCCTTCCAAGTGTTCCCGG | + |
|
Preference number: 1 (lower is better) Translates to: SSVQQCYSCIQTSEM*HLEQAFCYPSKCSR Trigger: CCGGGAACACTTGGAAGGGTAACAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAACTGTAACATTGCTGTACAGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| 3UTR CCA 90 bp | CTTTGTCTATCAAGAGTGGCCCGCATTTGTAGTCTCATGGTGGGCTaGCAATACGTTTTCTCTTCTGTACAGCAATGTTACAGTTGTATA | + |
|
Preference number: 1 (lower is better) Translates to: LCLSRVARICSLMVG*QYVFSSVQQCYSCI Trigger: TATACAACTGTAACATTGCTGTACAGAAGAGAAAACGTATTGCCAGCCCACCATGAGACTACAAATGCGGGCCACTCTTGATAGACAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| 3UTR CCA 90 bp | ATAGACTTTGTCTATCAAGAGTGGCCCGCATTTGTAGTCTCATGGTaGGCTGGCAATACGTTTTCTCTTCTGTACAGCAATGTTACAGTT | + |
|
Preference number: 1 (lower is better) Translates to: IDFVYQEWPAFVVSW*AGNTFSLLYSNVTV Trigger: AACTGTAACATTGCTGTACAGAAGAGAAAACGTATTGCCAGCCCACCATGAGACTACAAATGCGGGCCACTCTTGATAGACAAAGTCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| 3UTR CCA 90 bp | TTTATAGACTTTGTCTATCAAGAGTGGCCCGCATTTGTAGTCTCATaGTGGGCTGGCAATACGTTTTCTCTTCTGTACAGCAATGTTACA | + |
|
Preference number: 1 (lower is better) Translates to: FIDFVYQEWPAFVVS*WAGNTFSLLYSNVT Trigger: TGTAACATTGCTGTACAGAAGAGAAAACGTATTGCCAGCCCACCATGAGACTACAAATGCGGGCCACTCTTGATAGACAAAGTCTATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| 3UTR TCA 90 bp | TATCAAAAGAACTGTAGGGAAATTTCTGCAAGATTTCATATTTGGTaGGGCATCCTTCAAAGAATGAACTTAGACGAACTAAGGATGATG | + |
|
Preference number: 1 (lower is better) Translates to: YQKNCREISARFHIW*GILQRMNLDELRMM Trigger: CATCATCCTTAGTTCGTCTAAGTTCATTCTTTGAAGGATGCCTCACCAAATATGAAATCTTGCAGAAATTTCCCTACAGTTCTTTTGATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095075.5 |
||
| 3UTR-3UTR CCA 90 bp | TCCCTGATCCCTGCATTCAAATTATCTCCATTGTATTGGCTTCTATATCCCTACTTCCATCACACTGCTTaGGCTTTCCCCACATGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: SLIPAFKLSPLYWLLYPYFHHTA*AFPTCQ Trigger: CTGGCATGTGGGGAAAGCCCAAGCAGTGTGATGGAA...GTAGGGATATAGAAGCCAATACAATGGAGATAATTTGAATGCAGGGATCAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| 3UTR CAA 90 bp | GGTGGGCTGGCAATACGTTTTCTCTTCTGTACAGCAATGTTACAGTaGTATACAGACATCAGAAATGTGGCATTTGGAGCAGGCTTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: GGLAIRFLFCTAMLQ*YTDIRNVAFGAGFL Trigger: CAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAACTGTAACATTGCTGTACAGAAGAGAAAACGTATTGCCAGCCCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAAAGGGATGGAAATTCTCCAGGAAGAAGAGTTCCCAGAACACAGAGGATGAACAGACATCAGAAATGTaGCATTTGGAGCAGGCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: QKGWKFSRKKSSQNTEDEQTSEM*HLEQAF Trigger: GAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTG...TTCATCCTCTGTGTTCTGGGAACTCTTCTTCCTGGAGAATTTCCATCCCTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095075.5 |
||
| 3UTR-3UTR GCA 90 bp | CAAAAGGGATGGAAATTCTCCAGGAAGAAGAGTTCCCAGAACACAGAGGATGAAAACCACGCACACACATaGAGGAAAGTTACGATTAAA | + |
|
Preference number: 2 (lower is better) Translates to: QKGWKFSRKKSSQNTEDENHAHT*RKVTIK Trigger: TTTAATCGTAACTTTCCTGCATGTGTGTGCGTGGTT...TTCATCCTCTGTGTTCTGGGAACTCTTCTTCCTGGAGAATTTCCATCCCTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095075.5 |
||
| 3UTR-3UTR CCA 90 bp | TCCCTGATCCCTGCATTCAAATTATCTCCATTGTATTGGCTTCTATATCCCTACCAGACATCAGAAATGTaGCATTTGGAGCAGGCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: SLIPAFKLSPLYWLLYPYQTSEM*HLEQAF Trigger: GAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTG...GTAGGGATATAGAAGCCAATACAATGGAGATAATTTGAATGCAGGGATCAGGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCCTTTCCCTGATCCCTGCATTCAAATTATCTCCATTGTATTGGCTTCTATATATGATTCCATCACACTaGTTGGGCTTTCCCCACATG | + |
|
Preference number: 2 (lower is better) Translates to: FLSLIPAFKLSPLYWLLYMIPSH*LGFPHM Trigger: CATGTGGGGAAAGCCCAAGCAGTGTGATGGAATCAT...ATATAGAAGCCAATACAATGGAGATAATTTGAATGCAGGGATCAGGGAAAGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| 3UTR-3UTR CCA 90 bp | CCACATCATACTACACTTTTATTTTCACACATACGCTGTATATACCAACCACCCTTTAATTATACTTCCTaGCCTGCAGAAGTACCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: PHHTTLLFSHIRCIYQPPFNYTS*PAEVPA Trigger: GGCAGGTACTTCTGCAGGCCAGGAAGTATAATTAAA...GGGTGGTTGGTATATACAGCGTATGTGTGAAAATAAAAGTGTAGTATGATGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095075.5 |
||
| 3UTR-3UTR TCA 90 bp | TCCCTGATCCCTGCATTCAAATTATCTCCATTGTATTGGCTTCTATATCCCTACAAGCAAATCTCTGCATaGTTAGGTAGAAATTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: SLIPAFKLSPLYWLLYPYKQISA*LGRNCA Trigger: TGCACAATTTCTACCTAATCATGCAGAGATTTGCTT...GTAGGGATATAGAAGCCAATACAATGGAGATAATTTGAATGCAGGGATCAGGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| 3UTR-3UTR TCA 90 bp | CCACATCATACTACACTTTTATTTTCACACATACGCTGTATATACCAACCACCCTCAGTCTCTATAAACTaGACTAGAGAGCAGTCTACA | + |
|
Preference number: 2 (lower is better) Translates to: PHHTTLLFSHIRCIYQPPSVSIN*TREQST Trigger: TGTAGACTGCTCTCTAGTTCAGTTTATAGAGACTGA...GGGTGGTTGGTATATACAGCGTATGTGTGAAAATAAAAGTGTAGTATGATGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095075.5 |
||
| 3UTR-3UTR CCA 90 bp | GCTAATCCTCAAGAAATGACCAGGCAATTTTGCCTTATTCTTAAACTACTTTTCAGTCTCATGGTGGGCTaGCAATACGTTTTCTCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: ANPQEMTRQFCLILKLLFSLMVG*QYVFSS Trigger: AGAAGAGAAAACGTATTGCCAGCCCACCATGAGACT...GAAAAGTAGTTTAAGAATAAGGCAAAATTGCCTGGTCATTTCTTGAGGATTAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095075.5 |
||
| 3UTR-3UTR TCA 90 bp | TTCCTTTCCCTGATCCCTGCATTCAAATTATCTCCATTGTATTGGCTTCTATATAAGCAAATCTCTGCATaGTTAGGTAGAAATTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: FLSLIPAFKLSPLYWLLYKQISA*LGRNCA Trigger: TGCACAATTTCTACCTAATCATGCAGAGATTTGCTT...ATATAGAAGCCAATACAATGGAGATAATTTGAATGCAGGGATCAGGGAAAGGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCCTTTCCCTGATCCCTGCATTCAAATTATCTCCATTGTATTGGCTTCTATATCTGATTGCTTTTCAATaGACAGATAATTCTCTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: FLSLIPAFKLSPLYWLLYLIAFQ*TDNSLR Trigger: CCTTAGAGAATTATCTGTGCATTGAAAAGCAATCAG...ATATAGAAGCCAATACAATGGAGATAATTTGAATGCAGGGATCAGGGAAAGGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| 3UTR CCA 72 bp | CCATCACACTGCTTGGGCTTTCCCCACATGCCAGTGTaGCCCCTCCCAAGGAACCAAATATTCTCACTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: PSHCLGFPHMPV*PLPRNQIFSLG Trigger: TCCAAGTGAGAATATTTGGTTCCTTGGGAGGGGCCACACTGGCATGTGGGGAAAGCCCAAGCAGTGTGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAAGAGTGGCCCGCATTTGTAGTCTCATGGTGGGCTGGCAATACGTTTTCTCTTCAGAAATGTGGCATTaGGAGCAGGCTTTCTGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: SRVARICSLMVGWQYVFSSEMWH*EQAFCY Trigger: GTAACAGAAAGCCTGCTCCAAATGCCACATTTCTGA...AGAGAAAACGTATTGCCAGCCCACCATGAGACTACAAATGCGGGCCACTCTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| 3UTR CCA 72 bp | TCAAGAGTGGCCCGCATTTGTAGTCTCATGGTGGGCTaGCAATACGTTTTCTCTTCTGTACAGCAATGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: SRVARICSLMVG*QYVFSSVQQCY Trigger: GTAACATTGCTGTACAGAAGAGAAAACGTATTGCCAGCCCACCATGAGACTACAAATGCGGGCCACTCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| 3UTR CCA 72 bp | GTCTATCAAGAGTGGCCCGCATTTGTAGTCTCATGGTaGGCTGGCAATACGTTTTCTCTTCTGTACAGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: VYQEWPAFVVSW*AGNTFSLLYSN Trigger: ATTGCTGTACAGAAGAGAAAACGTATTGCCAGCCCACCATGAGACTACAAATGCGGGCCACTCTTGATAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| 3UTR CCA 72 bp | TTTGTCTATCAAGAGTGGCCCGCATTTGTAGTCTCATaGTGGGCTGGCAATACGTTTTCTCTTCTGTACAGC | + |
|
Preference number: 3 (lower is better) Translates to: FVYQEWPAFVVS*WAGNTFSLLYS Trigger: GCTGTACAGAAGAGAAAACGTATTGCCAGCCCACCATGAGACTACAAATGCGGGCCACTCTTGATAGACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| 3UTR CCA 72 bp | AGAGCAGTCTACAGAACCTTAGCCTGGCAAAAGGGATaGAAATTCTCCAGGAAGAAGAGTTCCCAGAACACA | + |
|
Preference number: 3 (lower is better) Translates to: RAVYRTLAWQKG*KFSRKKSSQNT Trigger: TGTGTTCTGGGAACTCTTCTTCCTGGAGAATTTCCATCCCTTTTGCCAGGCTAAGGTTCTGTAGACTGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095075.5 |
||
| 3UTR CCA 72 bp | CAGCAATGTTACAGTTGTATACAGACATCAGAAATGTaGCATTTGGAGCAGGCTTTCTGTTACCCTTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: QQCYSCIQTSEM*HLEQAFCYPSK Trigger: CTTGGAAGGGTAACAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAACTGTAACATTGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| 3UTR CCA 72 bp | CTCTCTCTCTCTCTCTCTCTCTTTAATTATACTTCCTaGCCTGCAGAAGTACCTGCCAGGATACAAATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LSLSLSLFNYTS*PAEVPARIQMK Trigger: TTTCATTTGTATCCTGGCAGGTACTTCTGCAGGCCAGGAAGTATAATTAAAGAGAGAGAGAGAGAGAGAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTAATCCTCAAGAAATGACCAGGCAATTTTGCCTTATTCTTAAACTACTTTTCATTCCATCACACTGCTaGGGCTTTCCCCACATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: ANPQEMTRQFCLILKLLFIPSHC*GFPHMP Trigger: TGGCATGTGGGGAAAGCCCAAGCAGTGTGATGGAAT...GAAAAGTAGTTTAAGAATAAGGCAAAATTGCCTGGTCATTTCTTGAGGATTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095075.5 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTTTCCCTGATCCCTGCATTCAAATTATCTCCATTGTATTGGCTTCTATATTCAGAAATGTGGCATTaGGAGCAGGCTTTCTGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: FLSLIPAFKLSPLYWLLYSEMWH*EQAFCY Trigger: GTAACAGAAAGCCTGCTCCAAATGCCACATTTCTGA...ATATAGAAGCCAATACAATGGAGATAATTTGAATGCAGGGATCAGGGAAAGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| 3UTR GCA 72 bp | TTTCTTTTGTATTACCCAGTTCCTTTCCCTGATCCCTaGATTCAAATTATCTCCATTGTATTGGCTTCTATA | + |
|
Preference number: 3 (lower is better) Translates to: FLLYYPVPFPDP*IQIISIVLASI Trigger: TATAGAAGCCAATACAATGGAGATAATTTGAATGCAGGGATCAGGGAAAGGAACTGGGTAATACAAAAGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095075.5 |
||
| CDS-3UTR TCA 90 bp | ATTCCATCACACTGCTTGGGCTTTCCCCACATGCCAGTGTGGCCCCTCCCAAGGGCAGTGCGGTCACTCTaGGCCACTCCTGTGCCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: IPSHCLGFPHMPVWPLPRAVRSL*ATPVPY Trigger: GTAAGGCACAGGAGTGGCTCAGAGTGACCGCACTGC...CCTTGGGAGGGGCCACACTGGCATGTGGGGAAAGCCCAAGCAGTGTGATGGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR GCA 90 bp | ATTCCATCACACTGCTTGGGCTTTCCCCACATGCCAGTGTGGCCCCTCCCAAGGCCCAGCATGCACCGCTaGTCTGCAGATACTAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: IPSHCLGFPHMPVWPLPRPSMHR*SADTRQ Trigger: CTGTCTAGTATCTGCAGAGCAGCGGTGCATGCTGGG...CCTTGGGAGGGGCCACACTGGCATGTGGGGAAAGCCCAAGCAGTGTGATGGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR TCA 90 bp | ATTCCATCACACTGCTTGGGCTTTCCCCACATGCCAGTGTGGCCCCTCCCAAGGAGCATAATGTGGATTTaGCTGCATACAGTTTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IPSHCLGFPHMPVWPLPRSIMWI*LHTVSR Trigger: CCTCGAAACTGTATGCAGTCAAATCCACATTATGCT...CCTTGGGAGGGGCCACACTGGCATGTGGGGAAAGCCCAAGCAGTGTGATGGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR GCA 90 bp | TCAAGAGTGGCCCGCATTTGTAGTCTCATGGTGGGCTGGCAATACGTTTTCTCTGCCTTGGGCCATATCTaGCCCCAGATGTTCATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SRVARICSLMVGWQYVFSALGHI*PQMFML Trigger: CAACATGAACATCTGGGGGCAGATATGGCCCAAGGC...AGAGAAAACGTATTGCCAGCCCACCATGAGACTACAAATGCGGGCCACTCTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CCA 90 bp | TCAAGAGTGGCCCGCATTTGTAGTCTCATGGTGGGCTGGCAATACGTTTTCTCTGAGGACAGTACACTCTaGGGCAATGAGAAGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRVARICSLMVGWQYVFSEDSTL*GNEKQA Trigger: AGCCTGCTTCTCATTGCCCCAGAGTGTACTGTCCTC...AGAGAAAACGTATTGCCAGCCCACCATGAGACTACAAATGCGGGCCACTCTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR GCA 90 bp | TCAAGAGTGGCCCGCATTTGTAGTCTCATGGTGGGCTGGCAATACGTTTTCTCTTTCAGCCCAGGATTCTaGAGATCTTTCCAGCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRVARICSLMVGWQYVFSFSPGF*RSFQLH Trigger: GTGGAGCTGGAAAGATCTGCAGAATCCTGGGCTGAA...AGAGAAAACGTATTGCCAGCCCACCATGAGACTACAAATGCGGGCCACTCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR GCA 90 bp | CAAAAGGGATGGAAATTCTCCAGGAAGAAGAGTTCCCAGAACACAGAGGATGAACGAACCACCCCAGCATaGACCGCTGCTCTGCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: QKGWKFSRKKSSQNTEDERTTPA*TAALQI Trigger: TATCTGCAGAGCAGCGGTGCATGCTGGGGTGGTTCG...TTCATCCTCTGTGTTCTGGGAACTCTTCTTCCTGGAGAATTTCCATCCCTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095075.5 |
||
| CDS-3UTR CCA 90 bp | TCAAGAGTGGCCCGCATTTGTAGTCTCATGGTGGGCTGGCAATACGTTTTCTCTCATACCTGTTGCAGGTaGTCCCTTTACACTGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRVARICSLMVGWQYVFSHTCCR*SLYTGL Trigger: GAGACCAGTGTAAAGGGACCACCTGCAACAGGTATG...AGAGAAAACGTATTGCCAGCCCACCATGAGACTACAAATGCGGGCCACTCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR TCA 90 bp | TCAAGAGTGGCCCGCATTTGTAGTCTCATGGTGGGCTGGCAATACGTTTTCTCTTACCATGCTTGTACATaGAAGGTTGGGGGTCGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SRVARICSLMVGWQYVFSYHACT*KVGGRY Trigger: ATACCGACCCCCAACCTTTCATGTACAAGCATGGTA...AGAGAAAACGTATTGCCAGCCCACCATGAGACTACAAATGCGGGCCACTCTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CCA 90 bp | TCAAGAGTGGCCCGCATTTGTAGTCTCATGGTGGGCTGGCAATACGTTTTCTCTAGGAACCACCATAGCTaGAACTGCTCTAGCCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SRVARICSLMVGWQYVFSRNHHS*NCSSHK Trigger: TTTGTGGCTAGAGCAGTTCCAGCTATGGTGGTTCCT...AGAGAAAACGTATTGCCAGCCCACCATGAGACTACAAATGCGGGCCACTCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR TCA 90 bp | CAAAAGGGATGGAAATTCTCCAGGAAGAAGAGTTCCCAGAACACAGAGGATGAACAGGGCCAGAACATCTaGAAGGACAGTAAGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QKGWKFSRKKSSQNTEDEQGQNI*KDSKGH Trigger: GTGACCCTTACTGTCCTTTCAGATGTTCTGGCCCTG...TTCATCCTCTGTGTTCTGGGAACTCTTCTTCCTGGAGAATTTCCATCCCTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095075.5 |
||
| CDS-3UTR TCA 90 bp | CAAAAGGGATGGAAATTCTCCAGGAAGAAGAGTTCCCAGAACACAGAGGATGAATGGGTGTCATGGACCTaGGACTGCTGCCGTTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: QKGWKFSRKKSSQNTEDEWVSWT*DCCRSI Trigger: AATTGAACGGCAGCAGTCTCAGGTCCATGACACCCA...TTCATCCTCTGTGTTCTGGGAACTCTTCTTCCTGGAGAATTTCCATCCCTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095075.5 |
||
| CDS-3UTR CCA 90 bp | TGTTACAGTTGTATACAGACATCAGAAATGTGGCATTTGGAGCAGGCTTTCTGTCCAAATTCTGTCCAATaGAGGGCAGCAGGCTCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: CYSCIQTSEMWHLEQAFCPNSVQ*RAAGSR Trigger: CCGCGAGCCTGCTGCCCTCCATTGGACAGAATTTGG...ACAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAACTGTAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CCA 90 bp | CAAAAGGGATGGAAATTCTCCAGGAAGAAGAGTTCCCAGAACACAGAGGATGAACCCACCAGTTTCCCTTaGGGGAGTAATTGCACACCA | + |
|
Preference number: 4 (lower is better) Translates to: QKGWKFSRKKSSQNTEDEPTSFP*GSNCTP Trigger: TGGTGTGCAATTACTCCCCCAAGGGAAACTGGTGGG...TTCATCCTCTGTGTTCTGGGAACTCTTCTTCCTGGAGAATTTCCATCCCTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095075.5 |
||
| CDS-3UTR CCA 90 bp | CAAAAGGGATGGAAATTCTCCAGGAAGAAGAGTTCCCAGAACACAGAGGATGAATCCTCCAAAACTGGGTaGGCAAGCAGAACAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QKGWKFSRKKSSQNTEDESSKTG*ASRTRP Trigger: AGGCCTTGTTCTGCTTGCCCACCCAGTTTTGGAGGA...TTCATCCTCTGTGTTCTGGGAACTCTTCTTCCTGGAGAATTTCCATCCCTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095075.5 |
||
| CDS-3UTR TCA 90 bp | TTCTGTACAGCAATGTTACAGTTGTATACAGACATCAGAAATGTGGCATTTGGAGCAGTGCGGTCACTCTaGGCCACTCCTGTGCCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: FCTAMLQLYTDIRNVAFGAVRSL*ATPVPY Trigger: GTAAGGCACAGGAGTGGCTCAGAGTGACCGCACTGC...TCCAAATGCCACATTTCTGATGTCTGTATACAACTGTAACATTGCTGTACAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR TCA 90 bp | TCAAGAGTGGCCCGCATTTGTAGTCTCATGGTGGGCTGGCAATACGTTTTCTCTGGTATAATACCTGTCTaGCCCTTCTTTGTAGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SRVARICSLMVGWQYVFSGIIPV*PFFVAQ Trigger: TTGTGCTACAAAGAAGGGTCAGACAGGTATTATACC...AGAGAAAACGTATTGCCAGCCCACCATGAGACTACAAATGCGGGCCACTCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR GCA 90 bp | TGTTACAGTTGTATACAGACATCAGAAATGTGGCATTTGGAGCAGGCTTTCTGTCCCAGCATGCACCGCTaGTCTGCAGATACTAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: CYSCIQTSEMWHLEQAFCPSMHR*SADTRQ Trigger: CTGTCTAGTATCTGCAGAGCAGCGGTGCATGCTGGG...ACAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAACTGTAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CCA 90 bp | CCACATCATACTACACTTTTATTTTCACACATACGCTGTATATACCAACCACCCCCAAATTCTGTCCAATaGAGGGCAGCAGGCTCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PHHTTLLFSHIRCIYQPPPNSVQ*RAAGSR Trigger: CCGCGAGCCTGCTGCCCTCCATTGGACAGAATTTGG...GGGTGGTTGGTATATACAGCGTATGTGTGAAAATAAAAGTGTAGTATGATGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095075.5 |
||
| CDS-3UTR CCA 90 bp | TCCCTGATCCCTGCATTCAAATTATCTCCATTGTATTGGCTTCTATATCCCTACCCAAGTAGACTGCCTTaGGCCATATCTGCCCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLIPAFKLSPLYWLLYPYPSRLP*AISAPR Trigger: TCTGGGGGCAGATATGGCCCAAGGCAGTCTACTTGG...GTAGGGATATAGAAGCCAATACAATGGAGATAATTTGAATGCAGGGATCAGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CCA 90 bp | TTGTATACAGACATCAGAAATGTGGCATTTGGAGCAGGCTTTCTGTTACCCTTCCCCACCAGTTTCCCTTaGGGGAGTAATTGCACACCA | + |
|
Preference number: 4 (lower is better) Translates to: LYTDIRNVAFGAGFLLPFPTSFP*GSNCTP Trigger: TGGTGTGCAATTACTCCCCCAAGGGAAACTGGTGGG...GAAGGGTAACAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CCA 90 bp | TCAAGAGTGGCCCGCATTTGTAGTCTCATGGTGGGCTGGCAATACGTTTTCTCTGTGGTCCCTTTACACTaGTCTCTCAATCTTACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SRVARICSLMVGWQYVFSVVPLH*SLNLTS Trigger: TGAAGTAAGATTGAGAGACCAGTGTAAAGGGACCAC...AGAGAAAACGTATTGCCAGCCCACCATGAGACTACAAATGCGGGCCACTCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR TCA 90 bp | TGTTACAGTTGTATACAGACATCAGAAATGTGGCATTTGGAGCAGGCTTTCTGTCAGGGCCAGAACATCTaGAAGGACAGTAAGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: CYSCIQTSEMWHLEQAFCQGQNI*KDSKGH Trigger: GTGACCCTTACTGTCCTTTCAGATGTTCTGGCCCTG...ACAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAACTGTAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR GCA 90 bp | GGGCCATTCACAGTCACTTTAGATATACTTCATCAGTGGCATATACAAAGCACCTTCAGCCCAGGATTCTaGAGATCTTTCCAGCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GPFTVTLDILHQWHIQSTFSPGF*RSFQLH Trigger: GTGGAGCTGGAAAGATCTGCAGAATCCTGGGCTGAA...GGTGCTTTGTATATGCCACTGATGAAGTATATCTAAAGTGACTGTGAATGGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTGATCCCTGCATTCAAATTATCTCCATTGTATTGGCTTCTATATCCCTACGCCTTGGGCCATATCTaGCCCCAGATGTTCATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLIPAFKLSPLYWLLYPYALGHI*PQMFML Trigger: CAACATGAACATCTGGGGGCAGATATGGCCCAAGGC...GTAGGGATATAGAAGCCAATACAATGGAGATAATTTGAATGCAGGGATCAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR GCA 90 bp | CCACATCATACTACACTTTTATTTTCACACATACGCTGTATATACCAACCACCCGCACACCAAGTAGACTaGCTTGGGCCATATCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PHHTTLLFSHIRCIYQPPAHQVD*LGPYLP Trigger: GGGCAGATATGGCCCAAGGCAGTCTACTTGGTGTGC...GGGTGGTTGGTATATACAGCGTATGTGTGAAAATAAAAGTGTAGTATGATGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095075.5 |
||
| CDS-3UTR GCA 90 bp | TTCCTTTCCCTGATCCCTGCATTCAAATTATCTCCATTGTATTGGCTTCTATATCGAACCACCCCAGCATaGACCGCTGCTCTGCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: FLSLIPAFKLSPLYWLLYRTTPA*TAALQI Trigger: TATCTGCAGAGCAGCGGTGCATGCTGGGGTGGTTCG...ATATAGAAGCCAATACAATGGAGATAATTTGAATGCAGGGATCAGGGAAAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CCA 90 bp | CCACATCATACTACACTTTTATTTTCACACATACGCTGTATATACCAACCACCCCCAAGTAGACTGCCTTaGGCCATATCTGCCCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PHHTTLLFSHIRCIYQPPPSRLP*AISAPR Trigger: TCTGGGGGCAGATATGGCCCAAGGCAGTCTACTTGG...GGGTGGTTGGTATATACAGCGTATGTGTGAAAATAAAAGTGTAGTATGATGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000095075.5 |
||
| CDS-3UTR CCA 90 bp | TGTTACAGTTGTATACAGACATCAGAAATGTGGCATTTGGAGCAGGCTTTCTGTTCCTCCAAAACTGGGTaGGCAAGCAGAACAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CYSCIQTSEMWHLEQAFCSSKTG*ASRTRP Trigger: AGGCCTTGTTCTGCTTGCCCACCCAGTTTTGGAGGA...ACAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAACTGTAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTGATCCCTGCATTCAAATTATCTCCATTGTATTGGCTTCTATATCCCTACAGCCTCCTCCAAAACTaGGTGGGCAAGCAGAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLIPAFKLSPLYWLLYPYSLLQN*VGKQNK Trigger: CTTGTTCTGCTTGCCCACCCAGTTTTGGAGGAGGCT...GTAGGGATATAGAAGCCAATACAATGGAGATAATTTGAATGCAGGGATCAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CCA 90 bp | GTTACAGTTGTATACAGACATCAGAAATGTGGCATTTGGAGCAGGCTTTCTGTTGAGGACAGTACACTCTaGGGCAATGAGAAGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VTVVYRHQKCGIWSRLSVEDSTL*GNEKQA Trigger: AGCCTGCTTCTCATTGCCCCAGAGTGTACTGTCCTC...AACAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAACTGTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTTTCCCTGATCCCTGCATTCAAATTATCTCCATTGTATTGGCTTCTATATGCACACCAAGTAGACTaGCTTGGGCCATATCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FLSLIPAFKLSPLYWLLYAHQVD*LGPYLP Trigger: GGGCAGATATGGCCCAAGGCAGTCTACTTGGTGTGC...ATATAGAAGCCAATACAATGGAGATAATTTGAATGCAGGGATCAGGGAAAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR GCA 90 bp | GTTACAGTTGTATACAGACATCAGAAATGTGGCATTTGGAGCAGGCTTTCTGTTCCTTGGGGGAGTAATTaGACACCAAGTAGACTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VTVVYRHQKCGIWSRLSVPWGSN*TPSRLP Trigger: AGGCAGTCTACTTGGTGTGCAATTACTCCCCCAAGG...AACAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAACTGTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR GCA 90 bp | TGTTACAGTTGTATACAGACATCAGAAATGTGGCATTTGGAGCAGGCTTTCTGTGGCACTCATACCTGTTaGAGGTGGTCCCTTTACACT | + |
|
Preference number: 4 (lower is better) Translates to: CYSCIQTSEMWHLEQAFCGTHTC*RWSLYT Trigger: AGTGTAAAGGGACCACCTGCAACAGGTATGAGTGCC...ACAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAACTGTAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CCA 90 bp | TTGTATACAGACATCAGAAATGTGGCATTTGGAGCAGGCTTTCTGTTACCCTTCAGGAACCACCATAGCTaGAACTGCTCTAGCCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: LYTDIRNVAFGAGFLLPFRNHHS*NCSSHK Trigger: TTTGTGGCTAGAGCAGTTCCAGCTATGGTGGTTCCT...GAAGGGTAACAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CCA 90 bp | TCAAGAGTGGCCCGCATTTGTAGTCTCATGGTGGGCTGGCAATACGTTTTCTCTACACTCATTTTCATATaGGTAGCTAAAGTCTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRVARICSLMVGWQYVFSTLIFI*VAKVSH Trigger: GTGAGAGACTTTAGCTACCCATATGAAAATGAGTGT...AGAGAAAACGTATTGCCAGCCCACCATGAGACTACAAATGCGGGCCACTCTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR TCA 90 bp | TTGTATACAGACATCAGAAATGTGGCATTTGGAGCAGGCTTTCTGTTACCCTTCGCTGTTGGGTACACCTaGCTTCTCAGTTTATTATGG | + |
|
Preference number: 4 (lower is better) Translates to: LYTDIRNVAFGAGFLLPFAVGYT*LLSLLW Trigger: CCATAATAAACTGAGAAGTCAGGTGTACCCAACAGC...GAAGGGTAACAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR TCA 90 bp | GTTACAGTTGTATACAGACATCAGAAATGTGGCATTTGGAGCAGGCTTTCTGTTTACCATGCTTGTACATaGAAGGTTGGGGGTCGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VTVVYRHQKCGIWSRLSVYHACT*KVGGRY Trigger: ATACCGACCCCCAACCTTTCATGTACAAGCATGGTA...AACAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAACTGTAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTTTCCCTGATCCCTGCATTCAAATTATCTCCATTGTATTGGCTTCTATATTGGGTGTCATGGACCTaGGACTGCTGCCGTTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: FLSLIPAFKLSPLYWLLYWVSWT*DCCRSI Trigger: AATTGAACGGCAGCAGTCTCAGGTCCATGACACCCA...ATATAGAAGCCAATACAATGGAGATAATTTGAATGCAGGGATCAGGGAAAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR TCA 90 bp | TCCCTGATCCCTGCATTCAAATTATCTCCATTGTATTGGCTTCTATATCCCTACTACACTCTGGGGCAATaGGAAGCAGGCTTATGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SLIPAFKLSPLYWLLYPYYTLGQ*EAGLWN Trigger: ATTCCATAAGCCTGCTTCTCATTGCCCCAGAGTGTA...GTAGGGATATAGAAGCCAATACAATGGAGATAATTTGAATGCAGGGATCAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTTTCCCTGATCCCTGCATTCAAATTATCTCCATTGTATTGGCTTCTATATTCCATGTTTGTAAGGTaGGTGGCCCCACCAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLSLIPAFKLSPLYWLLYSMFVR*VAPPVS Trigger: GGAAACTGGTGGGGCCACGCACCTTACAAACATGGA...ATATAGAAGCCAATACAATGGAGATAATTTGAATGCAGGGATCAGGGAAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR GCA 90 bp | CCACATCATACTACACTTTTATTTTCACACATACGCTGTATATACCAACCACCCGGCACTCATACCTGTTaGAGGTGGTCCCTTTACACT | + |
|
Preference number: 4 (lower is better) Translates to: PHHTTLLFSHIRCIYQPPGTHTC*RWSLYT Trigger: AGTGTAAAGGGACCACCTGCAACAGGTATGAGTGCC...GGGTGGTTGGTATATACAGCGTATGTGTGAAAATAAAAGTGTAGTATGATGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095075.5 |
||
| CDS-3UTR CCA 90 bp | CCACATCATACTACACTTTTATTTTCACACATACGCTGTATATACCAACCACCCCATACCTGTTGCAGGTaGTCCCTTTACACTGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PHHTTLLFSHIRCIYQPPHTCCR*SLYTGL Trigger: GAGACCAGTGTAAAGGGACCACCTGCAACAGGTATG...GGGTGGTTGGTATATACAGCGTATGTGTGAAAATAAAAGTGTAGTATGATGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095075.5 |
||
| CDS-3UTR CCA 90 bp | TGTTACAGTTGTATACAGACATCAGAAATGTGGCATTTGGAGCAGGCTTTCTGTAGCAGGCTTATGGAATaGACAGAGCTGTTCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: CYSCIQTSEMWHLEQAFCSRLME*TELFHC Trigger: ACAGTGGAACAGCTCTGTCCATTCCATAAGCCTGCT...ACAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAACTGTAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CCA 90 bp | GTTACAGTTGTATACAGACATCAGAAATGTGGCATTTGGAGCAGGCTTTCTGTTAGCAGGCTTATGGAATaGACAGAGCTGTTCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: VTVVYRHQKCGIWSRLSVSRLME*TELFHC Trigger: ACAGTGGAACAGCTCTGTCCATTCCATAAGCCTGCT...AACAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAACTGTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| 3UTR CAA 72 bp | TGTTACAGTTGTATACAGACATCAGAAATGTGGCATTaGGAGCAGGCTTTCTGTTACCCTTCCAAGTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CYSCIQTSEMWH*EQAFCYPSKCS Trigger: GGAACACTTGGAAGGGTAACAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAACTGTAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR TCA 90 bp | GTTACAGTTGTATACAGACATCAGAAATGTGGCATTTGGAGCAGGCTTTCTGTTGCTGTTGGGTACACCTaGCTTCTCAGTTTATTATGG | + |
|
Preference number: 4 (lower is better) Translates to: VTVVYRHQKCGIWSRLSVAVGYT*LLSLLW Trigger: CCATAATAAACTGAGAAGTCAGGTGTACCCAACAGC...AACAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAACTGTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR TCA 90 bp | TTGTATACAGACATCAGAAATGTGGCATTTGGAGCAGGCTTTCTGTTACCCTTCGGTATAATACCTGTCTaGCCCTTCTTTGTAGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LYTDIRNVAFGAGFLLPFGIIPV*PFFVAQ Trigger: TTGTGCTACAAAGAAGGGTCAGACAGGTATTATACC...GAAGGGTAACAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR TCA 90 bp | TGTTACAGTTGTATACAGACATCAGAAATGTGGCATTTGGAGCAGGCTTTCTGTTCACAGGTCACAGCTTaGACTGTAACTTTGGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: CYSCIQTSEMWHLEQAFCSQVTA*TVTLET Trigger: AGTCTCCAAAGTTACAGTTCAAGCTGTGACCTGTGA...ACAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAACTGTAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR TCA 90 bp | TCCCTGATCCCTGCATTCAAATTATCTCCATTGTATTGGCTTCTATATCCCTACTCACAGGTCACAGCTTaGACTGTAACTTTGGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: SLIPAFKLSPLYWLLYPYSQVTA*TVTLET Trigger: AGTCTCCAAAGTTACAGTTCAAGCTGTGACCTGTGA...GTAGGGATATAGAAGCCAATACAATGGAGATAATTTGAATGCAGGGATCAGGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR GCA 90 bp | GCTAATCCTCAAGAAATGACCAGGCAATTTTGCCTTATTCTTAAACTACTTTTCTCCATGTTTGTAAGGTaGGTGGCCCCACCAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ANPQEMTRQFCLILKLLFSMFVR*VAPPVS Trigger: GGAAACTGGTGGGGCCACGCACCTTACAAACATGGA...GAAAAGTAGTTTAAGAATAAGGCAAAATTGCCTGGTCATTTCTTGAGGATTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095075.5 |
||
| CDS-3UTR CCA 90 bp | GCTAATCCTCAAGAAATGACCAGGCAATTTTGCCTTATTCTTAAACTACTTTTCAGCCTCCTCCAAAACTaGGTGGGCAAGCAGAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: ANPQEMTRQFCLILKLLFSLLQN*VGKQNK Trigger: CTTGTTCTGCTTGCCCACCCAGTTTTGGAGGAGGCT...GAAAAGTAGTTTAAGAATAAGGCAAAATTGCCTGGTCATTTCTTGAGGATTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095075.5 |
||
| CDS-3UTR TCA 90 bp | TGTTACAGTTGTATACAGACATCAGAAATGTGGCATTTGGAGCAGGCTTTCTGTGCATATCATTGTCTGTaGTGGCTCTTTTCCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CYSCIQTSEMWHLEQAFCAYHCL*WLFSLF Trigger: AAAGAGGGAAAAGAGCCATCACAGACAATGATATGC...ACAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAACTGTAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTTTCCCTGATCCCTGCATTCAAATTATCTCCATTGTATTGGCTTCTATATTACACTCTGGGGCAATaGGAAGCAGGCTTATGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FLSLIPAFKLSPLYWLLYYTLGQ*EAGLWN Trigger: ATTCCATAAGCCTGCTTCTCATTGCCCCAGAGTGTA...ATATAGAAGCCAATACAATGGAGATAATTTGAATGCAGGGATCAGGGAAAGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CCA 90 bp | CAAAAGGGATGGAAATTCTCCAGGAAGAAGAGTTCCCAGAACACAGAGGATGAAACACTCATTTTCATATaGGTAGCTAAAGTCTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QKGWKFSRKKSSQNTEDETLIFI*VAKVSH Trigger: GTGAGAGACTTTAGCTACCCATATGAAAATGAGTGT...TTCATCCTCTGTGTTCTGGGAACTCTTCTTCCTGGAGAATTTCCATCCCTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095075.5 |
||
| CDS-3UTR CCA 90 bp | TTCCTTTCCCTGATCCCTGCATTCAAATTATCTCCATTGTATTGGCTTCTATATCAGATGTTCATGTTGTaGCACAGATTGACGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FLSLIPAFKLSPLYWLLYQMFML*HRLTAQ Trigger: CTGTGCCGTCAATCTGTGCCACAACATGAACATCTG...ATATAGAAGCCAATACAATGGAGATAATTTGAATGCAGGGATCAGGGAAAGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTGATCCCTGCATTCAAATTATCTCCATTGTATTGGCTTCTATATCCCTACGTGGTCCCTTTACACTaGTCTCTCAATCTTACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLIPAFKLSPLYWLLYPYVVPLH*SLNLTS Trigger: TGAAGTAAGATTGAGAGACCAGTGTAAAGGGACCAC...GTAGGGATATAGAAGCCAATACAATGGAGATAATTTGAATGCAGGGATCAGGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CCA 90 bp | TTGTATACAGACATCAGAAATGTGGCATTTGGAGCAGGCTTTCTGTTACCCTTCGATCAGAATAAATTCTaGTCCCGATTACACGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LYTDIRNVAFGAGFLLPFDQNKF*SRLHEH Trigger: ATGCTCGTGTAATCGGGACCAGAATTTATTCTGATC...GAAGGGTAACAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CCA 90 bp | GGGCCATTCACAGTCACTTTAGATATACTTCATCAGTGGCATATACAAAGCACCGATCAGAATAAATTCTaGTCCCGATTACACGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GPFTVTLDILHQWHIQSTDQNKF*SRLHEH Trigger: ATGCTCGTGTAATCGGGACCAGAATTTATTCTGATC...GGTGCTTTGTATATGCCACTGATGAAGTATATCTAAAGTGACTGTGAATGGCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR GCA 90 bp | GTTACAGTTGTATACAGACATCAGAAATGTGGCATTTGGAGCAGGCTTTCTGTTTATGGAGATCCAAGATaGTCTGCATATCATTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VTVVYRHQKCGIWSRLSVYGDPR*SAYHCL Trigger: CAGACAATGATATGCAGAGCATCTTGGATCTCCATA...AACAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAACTGTAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR GCA 90 bp | GTTACAGTTGTATACAGACATCAGAAATGTGGCATTTGGAGCAGGCTTTCTGTTCACTTCATCATACCATaGTTGTACATGAAAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VTVVYRHQKCGIWSRLSVHFIIP*LYMKGW Trigger: CCAACCTTTCATGTACAAGCATGGTATGATGAAGTG...AACAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAACTGTAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CCA 90 bp | GTTACAGTTGTATACAGACATCAGAAATGTGGCATTTGGAGCAGGCTTTCTGTTCTTCTCAGTTTATTATaGAGATCCAAGATGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VTVVYRHQKCGIWSRLSVLLSLL*RSKMLC Trigger: GCAGAGCATCTTGGATCTCCATAATAAACTGAGAAG...AACAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAACTGTAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR TCA 90 bp | TGTTACAGTTGTATACAGACATCAGAAATGTGGCATTTGGAGCAGGCTTTCTGTGAGAATATTCCATTCTaGAAAGAAGCAGTGTACATC | + |
|
Preference number: 4 (lower is better) Translates to: CYSCIQTSEMWHLEQAFCENIPF*KEAVYI Trigger: GATGTACACTGCTTCTTTTCAGAATGGAATATTCTC...ACAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAACTGTAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTTTCCCTGATCCCTGCATTCAAATTATCTCCATTGTATTGGCTTCTATATTATGGAGATCCAAGATaGTCTGCATATCATTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLSLIPAFKLSPLYWLLYYGDPR*SAYHCL Trigger: CAGACAATGATATGCAGAGCATCTTGGATCTCCATA...ATATAGAAGCCAATACAATGGAGATAATTTGAATGCAGGGATCAGGGAAAGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTTTCCCTGATCCCTGCATTCAAATTATCTCCATTGTATTGGCTTCTATATGAGAATATTCCATTCTaGAAAGAAGCAGTGTACATC | + |
|
Preference number: 4 (lower is better) Translates to: FLSLIPAFKLSPLYWLLYENIPF*KEAVYI Trigger: GATGTACACTGCTTCTTTTCAGAATGGAATATTCTC...ATATAGAAGCCAATACAATGGAGATAATTTGAATGCAGGGATCAGGGAAAGGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| 3UTR CAA 72 bp | TTCCTTTCCCTGATCCCTGCATTCAAATTATCTCCATaGTATTGGCTTCTATATCCCTACTCATATAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FLSLIPAFKLSP*YWLLYPYSYKN Trigger: ATTTTTATATGAGTAGGGATATAGAAGCCAATACAATGGAGATAATTTGAATGCAGGGATCAGGGAAAGGAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CAA 90 bp | ATTCCATCACACTGCTTGGGCTTTCCCCACATGCCAGTGTGGCCCCTCCCAAGGCACTGTCATCTGATCTaGTTCGAACATGGGTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: IPSHCLGFPHMPVWPLPRHCHLI*FEHGCH Trigger: ATGACACCCATGTTCGAACAAGATCAGATGACAGTG...CCTTGGGAGGGGCCACACTGGCATGTGGGGAAAGCCCAAGCAGTGTGATGGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS TCA 90 bp | AGACATCTGCTGAGTGCTGATGACGTCATTTCTGTCACTGTCATCTaGTCTTGTTCGAACATGGGTGTCATGGACCTGAGACTGCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RHLLSADDVISVTVI*SCSNMGVMDLRLLP Trigger: CGGCAGCAGTCTCAGGTCCATGACACCCATGTTCGAACAAGATCAGATGACAGTGACAGAAATGACGTCATCAGCACTCAGCAGATGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS CCA 90 bp | TTCTTTGTAGCACAAGTTTTCTCTACAGCCTCCTCCAAAACTGGGTaGGCAAGCAGAACAAGGCCTTCCATGTTTGTAAGGTGCGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FFVAQVFSTASSKTG*ASRTRPSMFVRCVA Trigger: GGCCACGCACCTTACAAACATGGAAGGCCTTGTTCTGCTTGCCCACCCAGTTTTGGAGGAGGCTGTAGAGAAAACTTGTGCTACAAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS CCA 90 bp | TCGAGGACAGTACACTCTGGGGCAATGAGAAGCAGGCTTATGGAATaGACAGAGCTGTTCCACTGTAGTTTCACAGGTCACAGCTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SRTVHSGAMRSRLME*TELFHCSFTGHSLN Trigger: GTTCAAGCTGTGACCTGTGAAACTACAGTGGAACAGCTCTGTCCATTCCATAAGCCTGCTTCTCATTGCCCCAGAGTGTACTGTCCTCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS CCA 90 bp | ACCCTTCTTTGTAGCACAAGTTTTCTCTACAGCCTCCTCCAAAACTaGGTGGGCAAGCAGAACAAGGCCTTCCATGTTTGTAAGGTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: TLLCSTSFLYSLLQN*VGKQNKAFHVCKVR Trigger: ACGCACCTTACAAACATGGAAGGCCTTGTTCTGCTTGCCCACCCAGTTTTGGAGGAGGCTGTAGAGAAAACTTGTGCTACAAAGAAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS GCA 90 bp | ATAATGTACACTCCCAATTACTTTAGCTTTACTGTCCAAGCAGCCTaGAGGGCACTCATACCTGTTGCAGGTGGTCCCTTTACACTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: IMYTPNYFSFTVQAA*RALIPVAGGPFTLV Trigger: GACCAGTGTAAAGGGACCACCTGCAACAGGTATGAGTGCCCTGCAGGCTGCTTGGACAGTAAAGCTAAAGTAATTGGGAGTGTACATTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS GCA 90 bp | ATCCACATAACCACCATGATTTCGAACCACCCCAGCATGCACCGCTaGTCTGCAGATACTAGACAGATCAGAATAAATTCTGGTCCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: IHITTMISNHPSMHR*SADTRQIRINSGPD Trigger: ATCGGGACCAGAATTTATTCTGATCTGTCTAGTATCTGCAGAGCAGCGGTGCATGCTGGGGTGGTTCGAAATCATGGTGGTTATGTGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS CCA 90 bp | CTTTACTGTCCAAGCAGCCTGCAGGGCACTCATACCTGTTGCAGGTaGTCCCTTTACACTGGTCTCTCAATCTTACTTCACAAGAAACAA | + |
|
Preference number: 5 (lower is better) Translates to: LYCPSSLQGTHTCCR*SLYTGLSILLHKKQ Trigger: TTGTTTCTTGTGAAGTAAGATTGAGAGACCAGTGTAAAGGGACCACCTGCAACAGGTATGAGTGCCCTGCAGGCTGCTTGGACAGTAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CAA 90 bp | CAAAAGGGATGGAAATTCTCCAGGAAGAAGAGTTCCCAGAACACAGAGGATGAAGGCTCTTTTCCCTCTTaGCTTAGCTGTCCACCATTC | + |
|
Preference number: 5 (lower is better) Translates to: QKGWKFSRKKSSQNTEDEGSFPS*LSCPPF Trigger: GAATGGTGGACAGCTAAGCAAAGAGGGAAAAGAGCC...TTCATCCTCTGTGTTCTGGGAACTCTTCTTCCTGGAGAATTTCCATCCCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095075.5 |
||
| CDS-3UTR CAA 90 bp | TCAAGAGTGGCCCGCATTTGTAGTCTCATGGTGGGCTGGCAATACGTTTTCTCTATGCTCTGCATATCATaGTCTGTGATGGCTCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRVARICSLMVGWQYVFSMLCIS*SVMALF Trigger: GAAAAGAGCCATCACAGACAATGATATGCAGAGCAT...AGAGAAAACGTATTGCCAGCCCACCATGAGACTACAAATGCGGGCCACTCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CAA 90 bp | TTGTATACAGACATCAGAAATGTGGCATTTGGAGCAGGCTTTCTGTTACCCTTCCCCCAGATGTTCATGTaGTGGCACAGATTGACGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LYTDIRNVAFGAGFLLPFPQMFM*WHRLTA Trigger: TGCCGTCAATCTGTGCCACAACATGAACATCTGGGG...GAAGGGTAACAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTGATCCCTGCATTCAAATTATCTCCATTGTATTGGCTTCTATATCCCTACCCCCAGATGTTCATGTaGTGGCACAGATTGACGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SLIPAFKLSPLYWLLYPYPQMFM*WHRLTA Trigger: TGCCGTCAATCTGTGCCACAACATGAACATCTGGGG...GTAGGGATATAGAAGCCAATACAATGGAGATAATTTGAATGCAGGGATCAGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS TCA 90 bp | ATCAGAATAAATTCTGGTCCCGATTACACGAGCATAATGTGGATTTaGCTGCATACAGTTTCGAGGACAGTACACTCTGGGGCAATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: IRINSGPDYTSIMWI*LHTVSRTVHSGAMR Trigger: TCTCATTGCCCCAGAGTGTACTGTCCTCGAAACTGTATGCAGTCAAATCCACATTATGCTCGTGTAATCGGGACCAGAATTTATTCTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CAA 90 bp | GGGCCATTCACAGTCACTTTAGATATACTTCATCAGTGGCATATACAAAGCACCGCCGTTCAATTTCATTaGTTTCTTCTTCTCGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GPFTVTLDILHQWHIQSTAVQFH*FLLLEG Trigger: CCCCTCGAGAAGAAGAAACAAATGAAATTGAACGGC...GGTGCTTTGTATATGCCACTGATGAAGTATATCTAAAGTGACTGTGAATGGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CAA 90 bp | GTTACAGTTGTATACAGACATCAGAAATGTGGCATTTGGAGCAGGCTTTCTGTTGTAATGCTTTCTCCCTaGTCGAGTGACATCTACCCA | + |
|
Preference number: 5 (lower is better) Translates to: VTVVYRHQKCGIWSRLSVVMLSP*SSDIYP Trigger: TGGGTAGATGTCACTCGACAAGGGAGAAAGCATTAC...AACAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAACTGTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CAA 90 bp | GGGCCATTCACAGTCACTTTAGATATACTTCATCAGTGGCATATACAAAGCACCTTCACAGGTCACAGCTaGAACTGTAACTTTGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GPFTVTLDILHQWHIQSTFTGHS*NCNFGD Trigger: GTCTCCAAAGTTACAGTTCAAGCTGTGACCTGTGAA...GGTGCTTTGTATATGCCACTGATGAAGTATATCTAAAGTGACTGTGAATGGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS CCA 90 bp | TTCCAGCTCCACATCCCATGTCATATACTCCATATTAGAAGCTGTTaGGTACACCTGACTTCTCAGTTTATTATGGAGATCCAAGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: FQLHIPCHILHIRSC*VHLTSQFIMEIQDA Trigger: AGCATCTTGGATCTCCATAATAAACTGAGAAGTCAGGTGTACCCAACAGCTTCTAATATGGAGTATATGACATGGGATGTGGAGCTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 ENSMUST00000160305.8 |
||
| CDS-3UTR CAA 90 bp | TTCTGTACAGCAATGTTACAGTTGTATACAGACATCAGAAATGTGGCATTTGGAGGCTCTTTTCCCTCTTaGCTTAGCTGTCCACCATTC | + |
|
Preference number: 5 (lower is better) Translates to: FCTAMLQLYTDIRNVAFGGSFPS*LSCPPF Trigger: GAATGGTGGACAGCTAAGCAAAGAGGGAAAAGAGCC...TCCAAATGCCACATTTCTGATGTCTGTATACAACTGTAACATTGCTGTACAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTGATCCCTGCATTCAAATTATCTCCATTGTATTGGCTTCTATATCCCTACGCCGTTCAATTTCATTaGTTTCTTCTTCTCGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLIPAFKLSPLYWLLYPYAVQFH*FLLLEG Trigger: CCCCTCGAGAAGAAGAAACAAATGAAATTGAACGGC...GTAGGGATATAGAAGCCAATACAATGGAGATAATTTGAATGCAGGGATCAGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CAA 90 bp | CAAAAGGGATGGAAATTCTCCAGGAAGAAGAGTTCCCAGAACACAGAGGATGAATCGGCAGATACTGGATaGCATTTCATAATGTACACT | + |
|
Preference number: 5 (lower is better) Translates to: QKGWKFSRKKSSQNTEDESADTG*HFIMYT Trigger: AGTGTACATTATGAAATGCAATCCAGTATCTGCCGA...TTCATCCTCTGTGTTCTGGGAACTCTTCTTCCTGGAGAATTTCCATCCCTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095075.5 |
||
| CDS-3UTR CAA 90 bp | GGGCCATTCACAGTCACTTTAGATATACTTCATCAGTGGCATATACAAAGCACCGAGCATAATGTGGATTaGACTGCATACAGTTTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: GPFTVTLDILHQWHIQSTEHNVD*TAYSFE Trigger: CTCGAAACTGTATGCAGTCAAATCCACATTATGCTC...GGTGCTTTGTATATGCCACTGATGAAGTATATCTAAAGTGACTGTGAATGGCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CAA 90 bp | TGTTACAGTTGTATACAGACATCAGAAATGTGGCATTTGGAGCAGGCTTTCTGTATGCTCTGCATATCATaGTCTGTGATGGCTCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CYSCIQTSEMWHLEQAFCMLCIS*SVMALF Trigger: GAAAAGAGCCATCACAGACAATGATATGCAGAGCAT...ACAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAACTGTAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CAA 90 bp | TTCTGTACAGCAATGTTACAGTTGTATACAGACATCAGAAATGTGGCATTTGGAGTAATGCTTTCTCCCTaGTCGAGTGACATCTACCCA | + |
|
Preference number: 5 (lower is better) Translates to: FCTAMLQLYTDIRNVAFGVMLSP*SSDIYP Trigger: TGGGTAGATGTCACTCGACAAGGGAGAAAGCATTAC...TCCAAATGCCACATTTCTGATGTCTGTATACAACTGTAACATTGCTGTACAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CAA 90 bp | TGTTACAGTTGTATACAGACATCAGAAATGTGGCATTTGGAGCAGGCTTTCTGTGAGCATAATGTGGATTaGACTGCATACAGTTTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: CYSCIQTSEMWHLEQAFCEHNVD*TAYSFE Trigger: CTCGAAACTGTATGCAGTCAAATCCACATTATGCTC...ACAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAACTGTAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTTTCCCTGATCCCTGCATTCAAATTATCTCCATTGTATTGGCTTCTATATTTCATCATACCATGCTaGTACATGAAAGGTTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: FLSLIPAFKLSPLYWLLYFIIPC*YMKGWG Trigger: CCCCCAACCTTTCATGTACAAGCATGGTATGATGAA...ATATAGAAGCCAATACAATGGAGATAATTTGAATGCAGGGATCAGGGAAAGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTTTCCCTGATCCCTGCATTCAAATTATCTCCATTGTATTGGCTTCTATATCACTGTCATCTGATCTaGTTCGAACATGGGTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: FLSLIPAFKLSPLYWLLYHCHLI*FEHGCH Trigger: ATGACACCCATGTTCGAACAAGATCAGATGACAGTG...ATATAGAAGCCAATACAATGGAGATAATTTGAATGCAGGGATCAGGGAAAGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS-3UTR CAA 90 bp | TGTTACAGTTGTATACAGACATCAGAAATGTGGCATTTGGAGCAGGCTTTCTGTTCGGCAGATACTGGATaGCATTTCATAATGTACACT | + |
|
Preference number: 5 (lower is better) Translates to: CYSCIQTSEMWHLEQAFCSADTG*HFIMYT Trigger: AGTGTACATTATGAAATGCAATCCAGTATCTGCCGA...ACAGAAAGCCTGCTCCAAATGCCACATTTCTGATGTCTGTATACAACTGTAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS TCA 90 bp | TTTCCTCCTGTAGGGTTCTGTAAACTTTCTGAGAATATTCCATTCTaGAAAGAAGCAGTGTACATCTTTCTTTTATCCACAGGCATGACA | + |
|
Preference number: 5 (lower is better) Translates to: FPPVGFCKLSENIPF*KEAVYIFLLSTGMT Trigger: TGTCATGCCTGTGGATAAAAGAAAGATGTACACTGCTTCTTTTCAGAATGGAATATTCTCAGAAAGTTTACAGAACCCTACAGGAGGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS GCA 72 bp | GTGCGTGGCCCCACCAGTTTCCCTTGGGGGAGTAATTaGACACCAAGTAGACTGCCTTGGGCCATATCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: VRGPTSFPWGSN*TPSRLPWAISA Trigger: GGCAGATATGGCCCAAGGCAGTCTACTTGGTGTGCAATTACTCCCCCAAGGGAAACTGGTGGGGCCACGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS GCA 72 bp | TGGGCAAGCAGAACAAGGCCTTCCATGTTTGTAAGGTaGGTGGCCCCACCAGTTTCCCTTGGGGGAGTAATT | + |
|
Preference number: 6 (lower is better) Translates to: WASRTRPSMFVR*VAPPVSLGGVI Trigger: AATTACTCCCCCAAGGGAAACTGGTGGGGCCACGCACCTTACAAACATGGAAGGCCTTGTTCTGCTTGCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS CCA 72 bp | GCCTTGGGCCATATCTGCCCCCAGATGTTCATGTTGTaGCACAGATTGACGGCACAGCCTATTCTGCTACTA | + |
|
Preference number: 6 (lower is better) Translates to: ALGHICPQMFML*HRLTAQPILLL Trigger: TAGTAGCAGAATAGGCTGTGCCGTCAATCTGTGCCACAACATGAACATCTGGGGGCAGATATGGCCCAAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS CCA 72 bp | CCAAGCAGCCTGCAGGGCACTCATACCTGTTGCAGGTaGTCCCTTTACACTGGTCTCTCAATCTTACTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PSSLQGTHTCCR*SLYTGLSILLH Trigger: GTGAAGTAAGATTGAGAGACCAGTGTAAAGGGACCACCTGCAACAGGTATGAGTGCCCTGCAGGCTGCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS CAA 72 bp | ACTGCCTTGGGCCATATCTGCCCCCAGATGTTCATGTaGTGGCACAGATTGACGGCACAGCCTATTCTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: TALGHICPQMFM*WHRLTAQPILL Trigger: TAGCAGAATAGGCTGTGCCGTCAATCTGTGCCACAACATGAACATCTGGGGGCAGATATGGCCCAAGGCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS GCA 72 bp | GTTTCCCTTGGGGGAGTAATTGCACACCAAGTAGACTaGCTTGGGCCATATCTGCCCCCAGATGTTCATGTT | + |
|
Preference number: 6 (lower is better) Translates to: VSLGGVIAHQVD*LGPYLPPDVHV Trigger: AACATGAACATCTGGGGGCAGATATGGCCCAAGGCAGTCTACTTGGTGTGCAATTACTCCCCCAAGGGAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS GCA 72 bp | TACTGTCCAAGCAGCCTGCAGGGCACTCATACCTGTTaGAGGTGGTCCCTTTACACTGGTCTCTCAATCTTA | + |
|
Preference number: 6 (lower is better) Translates to: YCPSSLQGTHTC*RWSLYTGLSIL Trigger: TAAGATTGAGAGACCAGTGTAAAGGGACCACCTGCAACAGGTATGAGTGCCCTGCAGGCTGCTTGGACAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS CAA 72 bp | CATATCTGCCCCCAGATGTTCATGTTGTGGCACAGATaGACGGCACAGCCTATTCTGCTACTAGTAGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: HICPQMFMLWHR*TAQPILLLVAH Trigger: GTGGGCTACTAGTAGCAGAATAGGCTGTGCCGTCAATCTGTGCCACAACATGAACATCTGGGGGCAGATATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS CAA 72 bp | TTACTGTCCAAGCAGCCTGCAGGGCACTCATACCTGTaGCAGGTGGTCCCTTTACACTGGTCTCTCAATCTT | + |
|
Preference number: 6 (lower is better) Translates to: LLSKQPAGHSYL*QVVPLHWSLNL Trigger: AAGATTGAGAGACCAGTGTAAAGGGACCACCTGCAACAGGTATGAGTGCCCTGCAGGCTGCTTGGACAGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS GCA 72 bp | ACTCCCAATTACTTTAGCTTTACTGTCCAAGCAGCCTaGAGGGCACTCATACCTGTTGCAGGTGGTCCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: TPNYFSFTVQAA*RALIPVAGGPF Trigger: AAAGGGACCACCTGCAACAGGTATGAGTGCCCTGCAGGCTGCTTGGACAGTAAAGCTAAAGTAATTGGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS CCA 72 bp | GTACACTCTGGGGCAATGAGAAGCAGGCTTATGGAATaGACAGAGCTGTTCCACTGTAGTTTCACAGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: VHSGAMRSRLME*TELFHCSFTGH Trigger: GTGACCTGTGAAACTACAGTGGAACAGCTCTGTCCATTCCATAAGCCTGCTTCTCATTGCCCCAGAGTGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS TCA 72 bp | CTGAGTGCTGATGACGTCATTTCTGTCACTGTCATCTaGTCTTGTTCGAACATGGGTGTCATGGACCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LSADDVISVTVI*SCSNMGVMDLR Trigger: TCTCAGGTCCATGACACCCATGTTCGAACAAGATCAGATGACAGTGACAGAAATGACGTCATCAGCACTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS GCA 72 bp | ACCACCATGATTTCGAACCACCCCAGCATGCACCGCTaGTCTGCAGATACTAGACAGATCAGAATAAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: TTMISNHPSMHR*SADTRQIRINS Trigger: AGAATTTATTCTGATCTGTCTAGTATCTGCAGAGCAGCGGTGCATGCTGGGGTGGTTCGAAATCATGGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS CAA 72 bp | TGGGTAGCTAAAGTCTCTCACTTCATCATACCATGCTaGTACATGAAAGGTTGGGGGTCGGTATCTTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: WVAKVSHFIIPC*YMKGWGSVSSP Trigger: TGGGGAAGATACCGACCCCCAACCTTTCATGTACAAGCATGGTATGATGAAGTGAGAGACTTTAGCTACCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 ENSMUST00000160305.8 |
||
| CDS TCA 72 bp | AATTCTGGTCCCGATTACACGAGCATAATGTGGATTTaGCTGCATACAGTTTCGAGGACAGTACACTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: NSGPDYTSIMWI*LHTVSRTVHSG Trigger: CCCAGAGTGTACTGTCCTCGAAACTGTATGCAGTCAAATCCACATTATGCTCGTGTAATCGGGACCAGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS CCA 72 bp | CCCACCCACCTTCATTGTCTATTATCCCATAGTGGATaGCAGCTCGGCAGATACTGGATTGCATTTCATAAT | + |
|
Preference number: 6 (lower is better) Translates to: PTHLHCLLSHSG*QLGRYWIAFHN Trigger: ATTATGAAATGCAATCCAGTATCTGCCGAGCTGCCATCCACTATGGGATAATAGACAATGAAGGTGGGTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS CAA 90 bp | GATCAGAATAAATTCTGGTCCCGATTACACGAGCATAATGTGGATTaGACTGCATACAGTTTCGAGGACAGTACACTCTGGGGCAATGAG | + |
|
Preference number: 6 (lower is better) Translates to: DQNKFWSRLHEHNVD*TAYSFEDSTLWGNE Trigger: CTCATTGCCCCAGAGTGTACTGTCCTCGAAACTGTATGCAGTCAAATCCACATTATGCTCGTGTAATCGGGACCAGAATTTATTCTGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS GCA 72 bp | ATATGGGTAGCTAAAGTCTCTCACTTCATCATACCATaGTTGTACATGAAAGGTTGGGGGTCGGTATCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: IWVAKVSHFIIP*LYMKGWGSVSS Trigger: GGAAGATACCGACCCCCAACCTTTCATGTACAAGCATGGTATGATGAAGTGAGAGACTTTAGCTACCCATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 ENSMUST00000160305.8 |
||
| CDS CAA 72 bp | AAATTCTGGTCCCGATTACACGAGCATAATGTGGATTaGACTGCATACAGTTTCGAGGACAGTACACTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: KFWSRLHEHNVD*TAYSFEDSTLW Trigger: CCAGAGTGTACTGTCCTCGAAACTGTATGCAGTCAAATCCACATTATGCTCGTGTAATCGGGACCAGAATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS TCA 72 bp | AAGAAGCAGTGTACATCTTTCTTTTATCCACAGGCATaGCATCCACATAACCACCATGATTTCGAACCACCC | + |
|
Preference number: 6 (lower is better) Translates to: KKQCTSFFYPQA*HPHNHHDFEPP Trigger: GGGTGGTTCGAAATCATGGTGGTTATGTGGATGTCATGCCTGTGGATAAAAGAAAGATGTACACTGCTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS CAA 90 bp | TTGAATGCCATTTCTGTTGGATTTGATGAAGTAATGCTTTCTCCCTaGTCGAGTGACATCTACCCACCCACCTTCATTGTCTATTATCCC | + |
|
Preference number: 6 (lower is better) Translates to: LNAISVGFDEVMLSP*SSDIYPPTFIVYYP Trigger: GGGATAATAGACAATGAAGGTGGGTGGGTAGATGTCACTCGACAAGGGAGAAAGCATTACTTCATCAAATCCAACAGAAATGGCATTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 |
||
| CDS CCA 72 bp | CACATCCCATGTCATATACTCCATATTAGAAGCTGTTaGGTACACCTGACTTCTCAGTTTATTATGGAGATC | + |
|
Preference number: 6 (lower is better) Translates to: HIPCHILHIRSC*VHLTSQFIMEI Trigger: GATCTCCATAATAAACTGAGAAGTCAGGTGTACCCAACAGCTTCTAATATGGAGTATATGACATGGGATGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095075.5 ENSMUST00000159958.8 ENSMUST00000160305.8 |
||