RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CRISP3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000025433

Ensembl transcript IDs: ENSMUST00000026499.6

Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TACCATCTGGAATTGTTCCAATGTATTAAATCTATATATTCTTGGTaGGATGTGATAAGCCTGACTAGAGAGTATGACCTTTCTCTACTT +
Preference number: 1 (lower is better)
Translates to: YHLELFQCIKSIYSW*DVISLTREYDLSLL
Trigger: AAGTAGAGAAAGGTCATACTCTCTAGTCAGGCTTATCACATCCCACCAAGAATATATAGATTTAATACATTGGAACAATTCCAGATGGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026499.6
3UTR-3UTR CCA 90 bp AGGAACTATATGTTTTCTATTCCCTTACTTCATTGTGCTCTTGGAACATTAGTCTTGGTCCTGGCAGCCTaGACAGGAAATTTAGTGAAT +
Preference number: 2 (lower is better)
Translates to: RNYMFSIPLLHCALGTLVLVLAA*TGNLVN
Trigger: ATTCACTAAATTTCCTGTCCAGGCTGCCAGGACCAA...GACTAATGTTCCAAGAGCACAATGAAGTAAGGGAATAGAAAACATATAGTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026499.6
3UTR-3UTR CCA 90 bp AGGAACTATATGTTTTCTATTCCCTTACTTCATTGTGCTCTTGGAACATTAGTCAAATCTATATATTCTTaGTGGGATGTGATAAGCCTG +
Preference number: 2 (lower is better)
Translates to: RNYMFSIPLLHCALGTLVKSIYS*WDVISL
Trigger: CAGGCTTATCACATCCCACCAAGAATATATAGATTT...GACTAATGTTCCAAGAGCACAATGAAGTAAGGGAATAGAAAACATATAGTTCCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026499.6
3UTR-3UTR CAA 90 bp CAATGTATTAAATCTATATATTCTTGGTGGGATGTGATAAGCCTGACTAGAGAGATGACCTTTCTCTACTaGGTCCTGGCAGCCTGGACA +
Preference number: 3 (lower is better)
Translates to: QCIKSIYSWWDVISLTREMTFLY*VLAAWT
Trigger: TGTCCAGGCTGCCAGGACCAAGTAGAGAAAGGTCAT...CTCTCTAGTCAGGCTTATCACATCCCACCAAGAATATATAGATTTAATACATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026499.6
3UTR TCA 72 bp CAGACAATGTATAGTCATTGGCTAGATTTGACTTCATaGATGTGTCACAGATTTCAAATGTCAAGGTCCAAA +
Preference number: 3 (lower is better)
Translates to: QTMYSHWLDLTS*MCHRFQMSRSK
Trigger: TTTGGACCTTGACATTTGAAATCTGTGACACATTCATGAAGTCAAATCTAGCCAATGACTATACATTGTCTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026499.6
3UTR CCA 72 bp GAATTGTTCCAATGTATTAAATCTATATATTCTTGGTaGGATGTGATAAGCCTGACTAGAGAGTATGACCTT +
Preference number: 3 (lower is better)
Translates to: ELFQCIKSIYSW*DVISLTREYDL
Trigger: AAGGTCATACTCTCTAGTCAGGCTTATCACATCCCACCAAGAATATATAGATTTAATACATTGGAACAATTC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026499.6
CDS-3UTR CCA 90 bp GACTTCATGAATGTGTCACAGATTTCAAATGTCAAGGTCCAAAGGTTATTATCAATCTTGAAGAAGGGATaGGGGCAGTACAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: DFMNVSQISNVKVQRLLSILKKG*GQYSSQ
Trigger: CTGGCTGCTGTACTGCCCCCATCCCTTCTTCAAGAT...TGATAATAACCTTTGGACCTTGACATTTGAAATCTGTGACACATTCATGAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026499.6
CDS-3UTR TCA 90 bp TATTCTTGGTGGGATGTGATAAGCCTGACTAGAGAGTATGACCTTTCTCTACTTGACATATCCTTATATTaGCAACTCTTGGTGCACAGT +
Preference number: 4 (lower is better)
Translates to: YSWWDVISLTREYDLSLLDISLY*QLLVHS
Trigger: ACTGTGCACCAAGAGTTGTCAATATAAGGATATGTC...AAGTAGAGAAAGGTCATACTCTCTAGTCAGGCTTATCACATCCCACCAAGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026499.6
CDS-3UTR GCA 90 bp TATTCTTGGTGGGATGTGATAAGCCTGACTAGAGAGTATGACCTTTCTCTACTTCGTCTCAATTGGTTGTaGTTGCTTACAATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: YSWWDVISLTREYDLSLLRLNWL*LLTISS
Trigger: AGAAGAGATTGTAAGCAAGCACAACCAATTGAGACG...AAGTAGAGAAAGGTCATACTCTCTAGTCAGGCTTATCACATCCCACCAAGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026499.6
CDS-3UTR GCA 90 bp GACTTCATGAATGTGTCACAGATTTCAAATGTCAAGGTCCAAAGGTTATTATCAACCACACTAACATTTTaGTTTGGGCCCACACCAAAT +
Preference number: 4 (lower is better)
Translates to: DFMNVSQISNVKVQRLLSTTLTF*FGPTPN
Trigger: ATTTGGTGTGGGCCCAAAGCAAAATGTTAGTGTGGT...TGATAATAACCTTTGGACCTTGACATTTGAAATCTGTGACACATTCATGAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026499.6
CDS-3UTR CCA 90 bp GCTAGATTTGACTTCATGAATGTGTCACAGATTTCAAATGTCAAGGTCCAAAGGACTAACATTTTGCTTTaGGCCCACACCAAATATAAG +
Preference number: 4 (lower is better)
Translates to: ARFDFMNVSQISNVKVQRTNILL*AHTKYK
Trigger: CTTATATTTGGTGTGGGCCCAAAGCAAAATGTTAGT...CCTTTGGACCTTGACATTTGAAATCTGTGACACATTCATGAAGTCAAATCTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026499.6
CDS-3UTR CCA 90 bp GCTAGATTTGACTTCATGAATGTGTCACAGATTTCAAATGTCAAGGTCCAAAGGATAAAAGTATCTCAGTaGATTTTCAGGGCATTCAGC +
Preference number: 4 (lower is better)
Translates to: ARFDFMNVSQISNVKVQRIKVSQ*IFRAFS
Trigger: GCTGAATGCCCTGAAAATCCACTGAGATACTTTTAT...CCTTTGGACCTTGACATTTGAAATCTGTGACACATTCATGAAGTCAAATCTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026499.6
CDS-3UTR TCA 90 bp TCCCTTACTTCATTGTGCTCTTGGAACATTAGTCATATGAGTTTTAGTGACTTTTGGTACAAGGTAAGATaGCATGAACAAATTCTCACC +
Preference number: 4 (lower is better)
Translates to: SLTSLCSWNISHMSFSDFWYKVR*HEQILT
Trigger: GGTGAGAATTTGTTCATGTCATCTTACCTTGTACCA...AAAGTCACTAAAACTCATATGACTAATGTTCCAAGAGCACAATGAAGTAAGGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026499.6
CDS-3UTR GCA 90 bp ATTAAATCTATATATTCTTGGTGGGATGTGATAAGCCTGACTAGAGAGTATGACTCAATTGGTTGTGCTTaGTTACAATCTCTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: IKSIYSWWDVISLTREYDSIGCA*LQSLLG
Trigger: TCCAAGAAGAGATTGTAAGCAAGCACAACCAATTGA...GTCATACTCTCTAGTCAGGCTTATCACATCCCACCAAGAATATATAGATTTAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026499.6
CDS GCA 90 bp GACGTTTACACCAAAAAGACATATCCTTATATTGACAACTCTTGGTaGACAGTCCATCTTCACAGCGATCAGGACAACTGGCACATGGTG +
Preference number: 5 (lower is better)
Translates to: DVYTKKTYPYIDNSW*TVHLHSDQDNWHMV
Trigger: CACCATGTGCCAGTTGTCCTGATCGCTGTGAAGATGGACTGTGCACCAAGAGTTGTCAATATAAGGATATGTCTTTTTGGTGTAAACGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026499.6
CDS CCA 90 bp CCAGACGTTTACACCAAAAAGACATATCCTTATATTGACAACTCTTaGTGCACAGTCCATCTTCACAGCGATCAGGACAACTGGCACATG +
Preference number: 5 (lower is better)
Translates to: PDVYTKKTYPYIDNS*CTVHLHSDQDNWHM
Trigger: CATGTGCCAGTTGTCCTGATCGCTGTGAAGATGGACTGTGCACCAAGAGTTGTCAATATAAGGATATGTCTTTTTGGTGTAAACGTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026499.6
CDS TCA 90 bp CAGACGTATTCCAGACGTTTACACCAAAAAGACATATCCTTATATTaGCAACTCTTGGTGCACAGTCCATCTTCACAGCGATCAGGACAA +
Preference number: 5 (lower is better)
Translates to: QTYSRRLHQKDISLY*QLLVHSPSSQRSGQ
Trigger: TTGTCCTGATCGCTGTGAAGATGGACTGTGCACCAAGAGTTGTCAATATAAGGATATGTCTTTTTGGTGTAAACGTCTGGAATACGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026499.6
CDS-3UTR CAA 90 bp GACTTCATGAATGTGTCACAGATTTCAAATGTCAAGGTCCAAAGGTTATTATCACTCCTGAGAGTTATCTaGAAGAAGGGATGGGGGCAG +
Preference number: 5 (lower is better)
Translates to: DFMNVSQISNVKVQRLLSLLRVI*KKGWGQ
Trigger: CTGCCCCCATCCCTTCTTCAAGATAACTCTCAGGAG...TGATAATAACCTTTGGACCTTGACATTTGAAATCTGTGACACATTCATGAAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026499.6
CDS CCA 90 bp CCAAACAACCTGAGTATGATGTCCAACCACACTAACATTTTGCTTTaGGCCCACACCAAATATAAGACCTTTGGATTCATTATACCATCC +
Preference number: 5 (lower is better)
Translates to: PNNLSMMSNHTNILL*AHTKYKTFGFIIPS
Trigger: GGATGGTATAATGAATCCAAAGGTCTTATATTTGGTGTGGGCCCAAAGCAAAATGTTAGTGTGGTTGGACATCATACTCAGGTTGTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026499.6
CDS-3UTR CAA 90 bp GCTAGATTTGACTTCATGAATGTGTCACAGATTTCAAATGTCAAGGTCCAAAGGAACCACACTAACATTTaGCTTTGGGCCCACACCAAA +
Preference number: 5 (lower is better)
Translates to: ARFDFMNVSQISNVKVQRNHTNI*LWAHTK
Trigger: TTTGGTGTGGGCCCAAAGCAAAATGTTAGTGTGGTT...CCTTTGGACCTTGACATTTGAAATCTGTGACACATTCATGAAGTCAAATCTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026499.6
CDS GCA 90 bp CATTCACTTGAGCATCATAGTTCCATTCCATATTTAGTAAGTCACTaGCAGATGGAGAAACCTTTCGTCTCAATTGGTTGTGCTTGCTTA +
Preference number: 5 (lower is better)
Translates to: HSLEHHSSIPYLVSH*QMEKPFVSIGCACL
Trigger: TAAGCAAGCACAACCAATTGAGACGAAAGGTTTCTCCATCTGGCAGTGACTTACTAAATATGGAATGGAACTATGATGCTCAAGTGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026499.6
CDS CAA 90 bp ACAGTCCATCTTCACAGCGATCAGGACAACTGGCACATGGTGCTCTaGCTGTGTAAGCTAGGTATGGCCTGCTTGGATAATGGCCACTGT +
Preference number: 6 (lower is better)
Translates to: TVHLHSDQDNWHMVL*LCKLGMACLDNGHC
Trigger: ACAGTGGCCATTATCCAAGCAGGCCATACCTAGCTTACACAGCAAGAGCACCATGTGCCAGTTGTCCTGATCGCTGTGAAGATGGACTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026499.6
CDS CCA 72 bp AAGACTGTTCTCCTGAGAGTTATCTTGAAGAAGGGATaGGGGCAGTACAGCAGCCAGGAAGAACAGCACAAG +
Preference number: 6 (lower is better)
Translates to: KTVLLRVILKKG*GQYSSQEEQHK
Trigger: CTTGTGCTGTTCTTCCTGGCTGCTGTACTGCCCCCATCCCTTCTTCAAGATAACTCTCAGGAGAACAGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026499.6
CDS CAA 72 bp CTTCACAGCGATCAGGACAACTGGCACATGGTGCTCTaGCTGTGTAAGCTAGGTATGGCCTGCTTGGATAAT +
Preference number: 6 (lower is better)
Translates to: LHSDQDNWHMVL*LCKLGMACLDN
Trigger: ATTATCCAAGCAGGCCATACCTAGCTTACACAGCAAGAGCACCATGTGCCAGTTGTCCTGATCGCTGTGAAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026499.6
CDS GCA 72 bp ACCAAAAAGACATATCCTTATATTGACAACTCTTGGTaGACAGTCCATCTTCACAGCGATCAGGACAACTGG +
Preference number: 6 (lower is better)
Translates to: TKKTYPYIDNSW*TVHLHSDQDNW
Trigger: CCAGTTGTCCTGATCGCTGTGAAGATGGACTGTGCACCAAGAGTTGTCAATATAAGGATATGTCTTTTTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026499.6
CDS CAA 90 bp ACAGACGTATTCCAGACGTTTACACCAAAAAGACATATCCTTATATaGACAACTCTTGGTGCACAGTCCATCTTCACAGCGATCAGGACA +
Preference number: 6 (lower is better)
Translates to: TDVFQTFTPKRHILI*TTLGAQSIFTAIRT
Trigger: TGTCCTGATCGCTGTGAAGATGGACTGTGCACCAAGAGTTGTCAATATAAGGATATGTCTTTTTGGTGTAAACGTCTGGAATACGTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026499.6
CDS TCA 72 bp TCCAGACGTTTACACCAAAAAGACATATCCTTATATTaGCAACTCTTGGTGCACAGTCCATCTTCACAGCGA +
Preference number: 6 (lower is better)
Translates to: SRRLHQKDISLY*QLLVHSPSSQR
Trigger: TCGCTGTGAAGATGGACTGTGCACCAAGAGTTGTCAATATAAGGATATGTCTTTTTGGTGTAAACGTCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026499.6
CDS CAA 72 bp TTCCAGACGTTTACACCAAAAAGACATATCCTTATATaGACAACTCTTGGTGCACAGTCCATCTTCACAGCG +
Preference number: 6 (lower is better)
Translates to: FQTFTPKRHILI*TTLGAQSIFTA
Trigger: CGCTGTGAAGATGGACTGTGCACCAAGAGTTGTCAATATAAGGATATGTCTTTTTGGTGTAAACGTCTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026499.6
CDS CCA 72 bp CTGAGTATGATGTCCAACCACACTAACATTTTGCTTTaGGCCCACACCAAATATAAGACCTTTGGATTCATT +
Preference number: 6 (lower is better)
Translates to: LSMMSNHTNILL*AHTKYKTFGFI
Trigger: AATGAATCCAAAGGTCTTATATTTGGTGTGGGCCCAAAGCAAAATGTTAGTGTGGTTGGACATCATACTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026499.6
CDS CAA 72 bp ACATTTTGCTTTGGGCCCACACCAAATATAAGACCTTaGGATTCATTATACCATCCTTGGATTACAGAAGAC +
Preference number: 6 (lower is better)
Translates to: TFCFGPTPNIRP*DSLYHPWITED
Trigger: GTCTTCTGTAATCCAAGGATGGTATAATGAATCCAAAGGTCTTATATTTGGTGTGGGCCCAAAGCAAAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026499.6