Pregenerated sensors for CRIP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006356Ensembl transcript IDs: ENSMUST00000084882.9, ENSMUST00000196015.5, ENSMUST00000200380.5
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGGAACCAGCAGAGGGCTCCTCGCAAGGGCGCCAGCCATCACCCTaGGAATGCTGTGAGCTCACGGCCATCACCGGCAAGCAGAGCATA | + |
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Preference number: 1 (lower is better) Translates to: VEPAEGSSQGRQPSP*ECCELTAITGKQSI Trigger: TATGCTCTGCTTGCCGGTGATGGCCGTGAGCTCACAGCATTCCCAGGGTGATGGCTGGCGCCCTTGCGAGGAGCCCTCTGCTGGTTCCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084882.9 |
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| 3UTR TCA 90 bp | TTTCTCCTCCACCACTTAGGTCCCGGATTTGCAGGCGAGACACGCTaGGGCAGGACTAGGCAACAGGCCACTTTGCCTCCGGGTCAAACA | + |
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Preference number: 1 (lower is better) Translates to: FLLHHLGPGFAGETR*GRTRQQATLPPGQT Trigger: TGTTTGACCCGGAGGCAAAGTGGCCTGTTGCCTAGTCCTGCCTCAGCGTGTCTCGCCTGCAAATCCGGGACCTAAGTGGTGGAGGAGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084882.9 |
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| 3UTR CCA 90 bp | GGTGGGCAGGTGTGGGCAAAGGGATATATCATAGGACAGTCACCTTaGAGAGCTATCAGGGACACAGGAACACAGGACCCATGGGGCTAC | + |
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Preference number: 1 (lower is better) Translates to: GGQVWAKGYIIGQSP*RAIRDTGTQDPWGY Trigger: GTAGCCCCATGGGTCCTGTGTTCCTGTGTCCCTGATAGCTCTCCAAGGTGACTGTCCTATGATATATCCCTTTGCCCACACCTGCCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084882.9 |
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| 3UTR CAA 90 bp | TGGTGGGCAGGTGTGGGCAAAGGGATATATCATAGGACAGTCACCTaGGAGAGCTATCAGGGACACAGGAACACAGGACCCATGGGGCTA | + |
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Preference number: 2 (lower is better) Translates to: WWAGVGKGIYHRTVT*ESYQGHRNTGPMGL Trigger: TAGCCCCATGGGTCCTGTGTTCCTGTGTCCCTGATAGCTCTCCAAGGTGACTGTCCTATGATATATCCCTTTGCCCACACCTGCCCACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084882.9 |
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| 3UTR CCA 72 bp | GCAGAGGGCTCCTCGCAAGGGCGCCAGCCATCACCCTaGGAATGCTGTGAGCTCACGGCCATCACCGGCAAG | + |
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Preference number: 3 (lower is better) Translates to: AEGSSQGRQPSP*ECCELTAITGK Trigger: CTTGCCGGTGATGGCCGTGAGCTCACAGCATTCCCAGGGTGATGGCTGGCGCCCTTGCGAGGAGCCCTCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084882.9 |
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| 3UTR TCA 72 bp | GGGCAGCACGGGACACGCCAAGGTGACAAAGGGGGCTaGAGCTCTGGGACTATCCAGGCTTTCTCCTCCACC | + |
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Preference number: 3 (lower is better) Translates to: GQHGTRQGDKGG*SSGTIQAFSST Trigger: GGTGGAGGAGAAAGCCTGGATAGTCCCAGAGCTTCAGCCCCCTTTGTCACCTTGGCGTGTCCCGTGCTGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084882.9 |
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| 3UTR TCA 72 bp | CTCGCAAGGGCGCCAGCCATCACCCTGGGAATGCTGTaGGCTCACGGCCATCACCGGCAAGCAGAGCATAAA | + |
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Preference number: 3 (lower is better) Translates to: LARAPAITLGML*AHGHHRQAEHK Trigger: TTTATGCTCTGCTTGCCGGTGATGGCCGTGAGCTCACAGCATTCCCAGGGTGATGGCTGGCGCCCTTGCGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084882.9 |
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| 3UTR CCA 72 bp | GTGTGGGCAAAGGGATATATCATAGGACAGTCACCTTaGAGAGCTATCAGGGACACAGGAACACAGGACCCA | + |
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Preference number: 3 (lower is better) Translates to: VWAKGYIIGQSP*RAIRDTGTQDP Trigger: TGGGTCCTGTGTTCCTGTGTCCCTGATAGCTCTCCAAGGTGACTGTCCTATGATATATCCCTTTGCCCACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084882.9 |
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| CDS-3UTR CCA 90 bp | GGACTAGGCAACAGGCCACTTTGCCTCCGGGTCAAACAGGGGGACCCCGAGGACCCATCATGCTCAGCATaGCCGCCGGGGGTCAGTGTC | + |
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Preference number: 4 (lower is better) Translates to: GLGNRPLCLRVKQGDPEDPSCSA*PPGVSV Trigger: GACACTGACCCCCGGCGGCCATGCTGAGCATGATGG...GTCCTCGGGGTCCCCCTGTTTGACCCGGAGGCAAAGTGGCCTGTTGCCTAGTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000084882.9 |
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| CDS-3UTR TCA 90 bp | AGACACGCTGAGGCAGGACTAGGCAACAGGCCACTTTGCCTCCGGGTCAAACAGCCTCGATGGGGCCAGTaGCCTGAGGGGCCTCGGTCT | + |
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Preference number: 4 (lower is better) Translates to: RHAEAGLGNRPLCLRVKQPRWGQ*PEGPRS Trigger: AGACCGAGGCCCCTCAGGTCACTGGCCCCATCGAGG...CTGTTTGACCCGGAGGCAAAGTGGCCTGTTGCCTAGTCCTGCCTCAGCGTGTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084882.9 |
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| CDS-3UTR GCA 90 bp | ACTAGGCAACAGGCCACTTTGCCTCCGGGTCAAACAGGGGGACCCCGAGGACAGTTGAGACAGAACTTGTaGCAGTCCTTGCCCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: TRQQATLPPGQTGGPRGQLRQNL*QSLPRE Trigger: CTCCCTGGGCAAGGACTGGCACAAGTTCTGTCTCAA...CTGTCCTCGGGGTCCCCCTGTTTGACCCGGAGGCAAAGTGGCCTGTTGCCTAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084882.9 |
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| CDS-3UTR CCA 90 bp | CTATCAGGGACACAGGAACACAGGACCCATGGGGCTACGGAGGCACACAGACAGTGGGTCCAAACAGCGTaGCATAGCAGGGCTTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: LSGTQEHRTHGATEAHRQWVQTA*HSRACG Trigger: GCCACAAGCCCTGCTATGCCACGCTGTTTGGACCCA...CTGTCTGTGTGCCTCCGTAGCCCCATGGGTCCTGTGTTCCTGTGTCCCTGATAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084882.9 |
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| CDS-3UTR TCA 90 bp | CTATCAGGGACACAGGAACACAGGACCCATGGGGCTACGGAGGCACACAGACAGTGCAGCGCTCACACTTaGGACAGAACTTGTGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: LSGTQEHRTHGATEAHRQCSAHT*DRTCAS Trigger: ACTGGCACAAGTTCTGTCTCAAGTGTGAGCGCTGCA...CTGTCTGTGTGCCTCCGTAGCCCCATGGGTCCTGTGTTCCTGTGTCCCTGATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084882.9 |
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| CDS-3UTR GCA 90 bp | ACTAGGCAACAGGCCACTTTGCCTCCGGGTCAAACAGGGGGACCCCGAGGACAGTGTCGTAGATATAGCTaGCCACAGCACCAGTATTCA | + |
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Preference number: 4 (lower is better) Translates to: TRQQATLPPGQTGGPRGQCRRYS*PQHQYS Trigger: TGAATACTGGTGCTGTGGGCAGCTATATCTACGACA...CTGTCCTCGGGGTCCCCCTGTTTGACCCGGAGGCAAAGTGGCCTGTTGCCTAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084882.9 ENSMUST00000196015.5 ENSMUST00000200380.5 |
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| CDS-3UTR GCA 90 bp | AGGCCACTTTGCCTCCGGGTCAAACAGGGGGACCCCGAGGACAGCATCTGCAGATGTCGTAGATATAGCTaGCCACAGCACCAGTATTCA | + |
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Preference number: 4 (lower is better) Translates to: RPLCLRVKQGDPEDSICRCRRYS*PQHQYS Trigger: TGAATACTGGTGCTGTGGGCAGCTATATCTACGACA...TCTGCAGATGCTGTCCTCGGGGTCCCCCTGTTTGACCCGGAGGCAAAGTGGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084882.9 ENSMUST00000196015.5 ENSMUST00000200380.5 |
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| CDS-3UTR GCA 90 bp | ACAGGCCACTTTGCCTCCGGGTCAAACAGGGGGACCCCGAGGACAGCATCTGCATGTCGTAGATATAGCTaGCCACAGCACCAGTATTCA | + |
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Preference number: 4 (lower is better) Translates to: TGHFASGSNRGTPRTASACRRYS*PQHQYS Trigger: TGAATACTGGTGCTGTGGGCAGCTATATCTACGACA...TGCAGATGCTGTCCTCGGGGTCCCCCTGTTTGACCCGGAGGCAAAGTGGCCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084882.9 ENSMUST00000196015.5 ENSMUST00000200380.5 |
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| CDS-3UTR GCA 90 bp | TATCAGGGACACAGGAACACAGGACCCATGGGGCTACGGAGGCACACAGACAGGAGTACACTCTCTTGTTaGATCGAGGACACATGTTGG | + |
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Preference number: 4 (lower is better) Translates to: YQGHRNTGPMGLRRHTDRSTLSC*IEDTCW Trigger: CCAACATGTGTCCTCGATGCAACAAGAGAGTGTACT...CCTGTCTGTGTGCCTCCGTAGCCCCATGGGTCCTGTGTTCCTGTGTCCCTGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084882.9 |
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| 3UTR CAA 72 bp | GGTGTGGGCAAAGGGATATATCATAGGACAGTCACCTaGGAGAGCTATCAGGGACACAGGAACACAGGACCC | + |
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Preference number: 4 (lower is better) Translates to: GVGKGIYHRTVT*ESYQGHRNTGP Trigger: GGGTCCTGTGTTCCTGTGTCCCTGATAGCTCTCCAAGGTGACTGTCCTATGATATATCCCTTTGCCCACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084882.9 |
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| CDS-3UTR CAA 90 bp | GGCCACTTTGCCTCCGGGTCAAACAGGGGGACCCCGAGGACAGCATCTGCAGATCCTGGGGTCAGGGTCTaGGAGCAGCGCTCACAGCGC | + |
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Preference number: 5 (lower is better) Translates to: GHFASGSNRGTPRTASADPGVRV*EQRSQR Trigger: GCGCTGTGAGCGCTGCTCCAAGACCCTGACCCCAGG...ATCTGCAGATGCTGTCCTCGGGGTCCCCCTGTTTGACCCGGAGGCAAAGTGGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000084882.9 ENSMUST00000196015.5 ENSMUST00000200380.5 |
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| CDS-3UTR CAA 90 bp | ACCTTGGAGAGCTATCAGGGACACAGGAACACAGGACCCATGGGGCTACGGAGGCCTGGGGTCAGGGTCTaGGAGCAGCGCTCACAGCGC | + |
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Preference number: 5 (lower is better) Translates to: TLESYQGHRNTGPMGLRRPGVRV*EQRSQR Trigger: GCGCTGTGAGCGCTGCTCCAAGACCCTGACCCCAGG...CCTCCGTAGCCCCATGGGTCCTGTGTTCCTGTGTCCCTGATAGCTCTCCAAGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084882.9 |
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| CDS-3UTR CAA 90 bp | AGACACGCTGAGGCAGGACTAGGCAACAGGCCACTTTGCCTCCGGGTCAAACAGCCTGGGGTCAGGGTCTaGGAGCAGCGCTCACAGCGC | + |
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Preference number: 5 (lower is better) Translates to: RHAEAGLGNRPLCLRVKQPGVRV*EQRSQR Trigger: GCGCTGTGAGCGCTGCTCCAAGACCCTGACCCCAGG...CTGTTTGACCCGGAGGCAAAGTGGCCTGTTGCCTAGTCCTGCCTCAGCGTGTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084882.9 ENSMUST00000196015.5 |
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| CDS TCA 90 bp | TCTTTCGCTCCTCAGTTCTCACCACAGGGACCTCGATGGGGCCAGTaGCCTGAGGGGCCTCGGTCTGAGGCTTCTCGTAGATGTAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: SFAPQFSPQGPRWGQ*PEGPRSEASRRCRS Trigger: GCTCCTACATCTACGAGAAGCCTCAGACCGAGGCCCCTCAGGTCACTGGCCCCATCGAGGTCCCTGTGGTGAGAACTGAGGAGCGAAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084882.9 |
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| CDS-3UTR CAA 90 bp | AACAGGCCACTTTGCCTCCGGGTCAAACAGGGGGACCCCGAGGACAGCATCTGCCACTTGAGACAGAACTaGTGCCAGTCCTTGCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: NRPLCLRVKQGDPEDSICHLRQN*CQSLPR Trigger: CCTGGGCAAGGACTGGCACAAGTTCTGTCTCAAGTG...GCAGATGCTGTCCTCGGGGTCCCCCTGTTTGACCCGGAGGCAAAGTGGCCTGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084882.9 |
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| CDS-3UTR CAA 90 bp | ACCTTGGAGAGCTATCAGGGACACAGGAACACAGGACCCATGGGGCTACGGAGGCCGGGGGTCAGTGTCTaGTTGCAGCGCTCACACTTG | + |
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Preference number: 5 (lower is better) Translates to: TLESYQGHRNTGPMGLRRPGVSV*LQRSHL Trigger: CAAGTGTGAGCGCTGCAACAAGACACTGACCCCCGG...CCTCCGTAGCCCCATGGGTCCTGTGTTCCTGTGTCCCTGATAGCTCTCCAAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084882.9 |
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| CDS-3UTR CAA 90 bp | TCAGGGACACAGGAACACAGGACCCATGGGGCTACGGAGGCACACAGACAGGAACCGATGTTCACGCCTTaGGGTCCAAACAGCGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: SGTQEHRTHGATEAHRQEPMFTP*GPNSVA Trigger: TGCCACGCTGTTTGGACCCAAAGGCGTGAACATCGG...TTCCTGTCTGTGTGCCTCCGTAGCCCCATGGGTCCTGTGTTCCTGTGTCCCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084882.9 |
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| CDS-3UTR CAA 90 bp | ATCAGGGACACAGGAACACAGGACCCATGGGGCTACGGAGGCACACAGACAGGAGGGGTCAGTGTCTTGTaGCAGCGCTCACACTTGAGA | + |
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Preference number: 5 (lower is better) Translates to: IRDTGTQDPWGYGGTQTGGVSVL*QRSHLR Trigger: TCTCAAGTGTGAGCGCTGCAACAAGACACTGACCCC...TCCTGTCTGTGTGCCTCCGTAGCCCCATGGGTCCTGTGTTCCTGTGTCCCTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084882.9 |
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| CDS-3UTR CAA 90 bp | GGCCACTTTGCCTCCGGGTCAAACAGGGGGACCCCGAGGACAGCATCTGCAGATGCGAAGTACACTCTCTaGTTGCATCGAGGACACATG | + |
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Preference number: 5 (lower is better) Translates to: GHFASGSNRGTPRTASADAKYTL*LHRGHM Trigger: CATGTGTCCTCGATGCAACAAGAGAGTGTACTTCGC...ATCTGCAGATGCTGTCCTCGGGGTCCCCCTGTTTGACCCGGAGGCAAAGTGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084882.9 |
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| CDS TCA 72 bp | CCTCAGTTCTCACCACAGGGACCTCGATGGGGCCAGTaGCCTGAGGGGCCTCGGTCTGAGGCTTCTCGTAGA | + |
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Preference number: 6 (lower is better) Translates to: PQFSPQGPRWGQ*PEGPRSEASRR Trigger: TCTACGAGAAGCCTCAGACCGAGGCCCCTCAGGTCACTGGCCCCATCGAGGTCCCTGTGGTGAGAACTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084882.9 |
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| CDS GCA 72 bp | GAACTGTGCCTTCCGGGTCCTTGTCGTAGATATAGCTaGCCACAGCACCAGTATTCACTCCTTTGGGTCCAA | + |
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Preference number: 6 (lower is better) Translates to: ELCLPGPCRRYS*PQHQYSLLWVQ Trigger: TTGGACCCAAAGGAGTGAATACTGGTGCTGTGGGCAGCTATATCTACGACAAGGACCCGGAAGGCACAGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084882.9 ENSMUST00000196015.5 ENSMUST00000200380.5 |
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| CDS CAA 72 bp | GCGAAGTACACTCTCTTGTTGCATCGAGGACACATGTaGGGCTCCCCAGTGAATGTGGTGACACTAGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: AKYTLLLHRGHM*GSPVNVVTLEA Trigger: AGCCTCTAGTGTCACCACATTCACTGGGGAGCCCAACATGTGTCCTCGATGCAACAAGAGAGTGTACTTCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084882.9 |
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| CDS CAA 90 bp | ACCTTCTCAGCGAAGTACACTCTCTTGTTGCATCGAGGACACATGTaGGGCTCCCCAGTGAATGTGGTGACACTAGAGGCTTTGCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: TFSAKYTLLLHRGHM*GSPVNVVTLEALLG Trigger: TCCCAGCAAAGCCTCTAGTGTCACCACATTCACTGGGGAGCCCAACATGTGTCCTCGATGCAACAAGAGAGTGTACTTCGCTGAGAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084882.9 |
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