Pregenerated sensors for CRIP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006360Ensembl transcript IDs: ENSMUST00000006523.12, ENSMUST00000199089.5, ENSMUST00000200553.2
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGGGTTCCCGAGAGCCCTGCTGTCCGGGGGTAAGGCCTGGCATGTaGCTGGGCGGGCAGGGAGAGTTTCCACAACCTGTAAGAAAGAGA | + |
|
Preference number: 1 (lower is better) Translates to: EGSREPCCPGVRPGM*LGGQGEFPQPVRKR Trigger: TCTCTTTCTTACAGGTTGTGGAAACTCTCCCTGCCCGCCCAGGCACATGCCAGGCCTTACCCCCGGACAGCAGGGCTCTCGGGAACCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200553.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGCTGTCCGGGGGTAAGGCCTGGCATGTGCCTGGGCGGGCAGGGAGAGTTTCCTGTAAACTGGTGGACTaGGTGGGATTGGAGATGGGG | + |
|
Preference number: 2 (lower is better) Translates to: LLSGGKAWHVPGRAGRVSCKLVD*VGLEMG Trigger: CCCCATCTCCAATCCCACCCAGTCCACCAGTTTACA...GGAAACTCTCCCTGCCCGCCCAGGCACATGCCAGGCCTTACCCCCGGACAGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200553.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCAGGTTTATTAAAGGCACTGAGGGTTCCCGAGAGCCCTGCTGTCCGGGGGTATGGACTGGGTGGGATTaGAGATGGGGCTATACCTCG | + |
|
Preference number: 2 (lower is better) Translates to: IRFIKGTEGSREPCCPGVWTGWD*RWGYTS Trigger: CGAGGTATAGCCCCATCTCCAATCCCACCCAGTCCA...TACCCCCGGACAGCAGGGCTCTCGGGAACCCTCAGTGCCTTTAATAAACCTGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200553.2 |
||
| 3UTR-3UTR CCA 90 bp | GACAAATGTGAGCGCAAAGTTTTGTTATTTACTCTATTAGGGATGACTCTGTCCAACTGGTGGACTGGGTaGGATTGGAGATGGGGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: DKCERKVLLFTLLGMTLSNWWTG*DWRWGY Trigger: ATAGCCCCATCTCCAATCCCACCCAGTCCACCAGTT...GGACAGAGTCATCCCTAATAGAGTAAATAACAAAACTTTGCGCTCACATTTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200553.2 |
||
| 3UTR CAA 90 bp | TTTCCACAACCTGTAAGAAAGAGAGACAAATGTGAGCGCAAAGTTTaGTTATTTACTCTATTAGGGATGACTCTGTCCTGTAAACTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: FPQPVRKRDKCERKV*LFTLLGMTLSCKLV Trigger: CACCAGTTTACAGGACAGAGTCATCCCTAATAGAGTAAATAACAAAACTTTGCGCTCACATTTGTCTCTCTTTCTTACAGGTTGTGGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200553.2 |
||
| 3UTR CCA 72 bp | GGGTTCCCGAGAGCCCTGCTGTCCGGGGGTAAGGCCTaGCATGTGCCTGGGCGGGCAGGGAGAGTTTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: GFPRALLSGGKA*HVPGRAGRVST Trigger: TGTGGAAACTCTCCCTGCCCGCCCAGGCACATGCCAGGCCTTACCCCCGGACAGCAGGGCTCTCGGGAACCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006523.12 ENSMUST00000200553.2 |
||
| 3UTR-3UTR CAA 90 bp | AGATCAGGTTTATTAAAGGCACTGAGGGTTCCCGAGAGCCCTGCTGTCCGGGGGGTGGACTGGGTGGGATaGGAGATGGGGCTATACCTC | + |
|
Preference number: 3 (lower is better) Translates to: RSGLLKALRVPESPAVRGVDWVG*EMGLYL Trigger: GAGGTATAGCCCCATCTCCAATCCCACCCAGTCCAC...CCCCCGGACAGCAGGGCTCTCGGGAACCCTCAGTGCCTTTAATAAACCTGATCT 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000200553.2 |
||
| 3UTR TCA 72 bp | AGAGTTTCCACAACCTGTAAGAAAGAGAGACAAATGTaGGCGCAAAGTTTTGTTATTTACTCTATTAGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: RVSTTCKKERQM*AQSFVIYSIRD Trigger: ATCCCTAATAGAGTAAATAACAAAACTTTGCGCTCACATTTGTCTCTCTTTCTTACAGGTTGTGGAAACTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200553.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTGTCCGGGGGTAAGGCCTGGCATGTGCCTGGGCGGGCAGGGAGAGTTTCCTGGTCACGGGAGGGGTaGCAAGGCAGGGGCCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLSGGKAWHVPGRAGRVSWSREG*QGRGQG Trigger: CCCTTGGCCCCTGCCTTGGCACCCCTCCCGTGACCA...GGAAACTCTCCCTGCCCGCCCAGGCACATGCCAGGCCTTACCCCCGGACAGCAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000199089.5 |
||
| CDS-3UTR GCA 90 bp | CTGCTGTCCGGGGGTAAGGCCTGGCATGTGCCTGGGCGGGCAGGGAGAGTTTCCGGCGGTACCTGGTCCTaGACAAGTGGCTGCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLSGGKAWHVPGRAGRVSGGTWS*TSGCSF Trigger: GAAGCTGCAGCCACTTGTGCAGGACCAGGTACCGCC...GGAAACTCTCCCTGCCCGCCCAGGCACATGCCAGGCCTTACCCCCGGACAGCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199089.5 |
||
| CDS-3UTR CCA 90 bp | TTCCCGAGAGCCCTGCTGTCCGGGGGTAAGGCCTGGCATGTGCCTGGGCGGGCATGTTTCCTGTTGCCATaGTCACGGGAGGGGTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FPRALLSGGKAWHVPGRACFLLP*SREGCQ Trigger: TTGGCACCCCTCCCGTGACCATGGCAACAGGAAACA...TGCCCGCCCAGGCACATGCCAGGCCTTACCCCCGGACAGCAGGGCTCTCGGGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199089.5 |
||
| CDS-3UTR CCA 90 bp | TTCCCGAGAGCCCTGCTGTCCGGGGGTAAGGCCTGGCATGTGCCTGGGCGGGCACTGGTCCTGCACAAGTaGCTGCAGCTTCTTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FPRALLSGGKAWHVPGRALVLHK*LQLLGL Trigger: AAGGCCAAGAAGCTGCAGCCACTTGTGCAGGACCAG...TGCCCGCCCAGGCACATGCCAGGCCTTACCCCCGGACAGCAGGGCTCTCGGGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199089.5 |
||
| CDS-3UTR GCA 90 bp | CTGCTGTCCGGGGGTAAGGCCTGGCATGTGCCTGGGCGGGCAGGGAGAGTTTCCGACGATGCCAGTCCTTaGCTAGTGAAGTCACTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLSGGKAWHVPGRAGRVSDDASP*LVKSLA Trigger: AGCGAGTGACTTCACTAGGCAAGGACTGGCATCGTC...GGAAACTCTCCCTGCCCGCCCAGGCACATGCCAGGCCTTACCCCCGGACAGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006523.12 ENSMUST00000199089.5 ENSMUST00000200553.2 |
||
| CDS-3UTR GCA 90 bp | CCCTGCTGTCCGGGGGTAAGGCCTGGCATGTGCCTGGGCGGGCAGGGAGAGTTTGACGATGCCAGTCCTTaGCTAGTGAAGTCACTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PCCPGVRPGMCLGGQGEFDDASP*LVKSLA Trigger: AGCGAGTGACTTCACTAGGCAAGGACTGGCATCGTC...AAACTCTCCCTGCCCGCCCAGGCACATGCCAGGCCTTACCCCCGGACAGCAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006523.12 ENSMUST00000199089.5 ENSMUST00000200553.2 |
||
| CDS-3UTR GCA 90 bp | TGCTGTCCGGGGGTAAGGCCTGGCATGTGCCTGGGCGGGCAGGGAGAGTTTCCAGACGATGCCAGTCCTTaGCTAGTGAAGTCACTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: CCPGVRPGMCLGGQGEFPDDASP*LVKSLA Trigger: AGCGAGTGACTTCACTAGGCAAGGACTGGCATCGTC...TGGAAACTCTCCCTGCCCGCCCAGGCACATGCCAGGCCTTACCCCCGGACAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006523.12 ENSMUST00000199089.5 ENSMUST00000200553.2 |
||
| CDS-3UTR CCA 90 bp | TTCCCGAGAGCCCTGCTGTCCGGGGGTAAGGCCTGGCATGTGCCTGGGCGGGCAGTGGCTGCAGCTTCTTaGCCTTCCAGAATGTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FPRALLSGGKAWHVPGRAVAAAS*PSRMLF Trigger: AAACAACATTCTGGAAGGCCAAGAAGCTGCAGCCAC...TGCCCGCCCAGGCACATGCCAGGCCTTACCCCCGGACAGCAGGGCTCTCGGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199089.5 |
||
| 3UTR CAA 72 bp | CCTGTAAGAAAGAGAGACAAATGTGAGCGCAAAGTTTaGTTATTTACTCTATTAGGGATGACTCTGTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PVRKRDKCERKV*LFTLLGMTLSC Trigger: ACAGGACAGAGTCATCCCTAATAGAGTAAATAACAAAACTTTGCGCTCACATTTGTCTCTCTTTCTTACAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200553.2 |
||
| CDS-3UTR CAA 90 bp | CCCTGCTGTCCGGGGGTAAGGCCTGGCATGTGCCTGGGCGGGCAGGGAGAGTTTGAATGTTGTTTCCTGTaGCCATGGTCACGGGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PCCPGVRPGMCLGGQGEFECCFL*PWSREG Trigger: CCCCTCCCGTGACCATGGCAACAGGAAACAACATTC...AAACTCTCCCTGCCCGCCCAGGCACATGCCAGGCCTTACCCCCGGACAGCAGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199089.5 |
||
| CDS-3UTR CAA 90 bp | TTCCCGAGAGCCCTGCTGTCCGGGGGTAAGGCCTGGCATGTGCCTGGGCGGGCATGGCCTTCCAGAATGTaGTTTCCTGTTGCCATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FPRALLSGGKAWHVPGRAWPSRM*FPVAMV Trigger: GACCATGGCAACAGGAAACAACATTCTGGAAGGCCA...TGCCCGCCCAGGCACATGCCAGGCCTTACCCCCGGACAGCAGGGCTCTCGGGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199089.5 |
||
| CDS-3UTR CAA 90 bp | TTCCCGAGAGCCCTGCTGTCCGGGGGTAAGGCCTGGCATGTGCCTGGGCGGGCAAGTGGCTGCAGCTTCTaGGCCTTCCAGAATGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: FPRALLSGGKAWHVPGRASGCSF*AFQNVV Trigger: AACAACATTCTGGAAGGCCAAGAAGCTGCAGCCACT...TGCCCGCCCAGGCACATGCCAGGCCTTACCCCCGGACAGCAGGGCTCTCGGGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199089.5 |
||
| CDS CCA 90 bp | TGGCTGCAGCTTCTTGGCCTTCCAGAATGTTGTTTCCTGTTGCCATaGTCACGGGAGGGGTGCCAAGGCAGGGGCCAAGGGCTGATACCT | + |
|
Preference number: 5 (lower is better) Translates to: WLQLLGLPECCFLLP*SREGCQGRGQGLIP Trigger: AGGTATCAGCCCTTGGCCCCTGCCTTGGCACCCCTCCCGTGACCATGGCAACAGGAAACAACATTCTGGAAGGCCAAGAAGCTGCAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199089.5 |
||
| CDS CCA 90 bp | CGCACTTGGGGCACTTCGGCATGGCGGTACCTGGTCCTGCACAAGTaGCTGCAGCTTCTTGGCCTTCCAGAATGTTGTTTCCTGTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RTWGTSAWRYLVLHK*LQLLGLPECCFLLP Trigger: TGGCAACAGGAAACAACATTCTGGAAGGCCAAGAAGCTGCAGCCACTTGTGCAGGACCAGGTACCGCCATGCCGAAGTGCCCCAAGTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199089.5 |
||
| CDS-3UTR CAA 90 bp | TGCTGTCCGGGGGTAAGGCCTGGCATGTGCCTGGGCGGGCAGGGAGAGTTTCCAGGGCTGATACCTTCTTaGTTGGTACACAGCAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: CCPGVRPGMCLGGQGEFPGLIPS*LVHSSF Trigger: AAAACTGCTGTGTACCAACAAAGAAGGTATCAGCCC...TGGAAACTCTCCCTGCCCGCCCAGGCACATGCCAGGCCTTACCCCCGGACAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199089.5 |
||
| CDS GCA 90 bp | CTTGGGGCACTTCGGCATGGCGGTACCTGGTCCTGCACAAGTGGCTaGAGCTTCTTGGCCTTCCAGAATGTTGTTTCCTGTTGCCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: LGALRHGGTWSCTSG*SFLAFQNVVSCCHG Trigger: ACCATGGCAACAGGAAACAACATTCTGGAAGGCCAAGAAGCTGCAGCCACTTGTGCAGGACCAGGTACCGCCATGCCGAAGTGCCCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199089.5 |
||
| CDS CCA 72 bp | CTTGTCGCACTTGGGGCACTTCGGCATGGCGGTACCTaGTCCTGCACAAGTGGCTGCAGCTTCTTGGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LVALGALRHGGT*SCTSGCSFLAF Trigger: GAAGGCCAAGAAGCTGCAGCCACTTGTGCAGGACCAGGTACCGCCATGCCGAAGTGCCCCAAGTGCGACAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199089.5 |
||
| CDS CCA 72 bp | CTTCTTGGCCTTCCAGAATGTTGTTTCCTGTTGCCATaGTCACGGGAGGGGTGCCAAGGCAGGGGCCAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LLGLPECCFLLP*SREGCQGRGQG Trigger: CCCTTGGCCCCTGCCTTGGCACCCCTCCCGTGACCATGGCAACAGGAAACAACATTCTGGAAGGCCAAGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199089.5 |
||
| CDS CAA 72 bp | CTGCAGCTTCTTGGCCTTCCAGAATGTTGTTTCCTGTaGCCATGGTCACGGGAGGGGTGCCAAGGCAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LQLLGLPECCFL*PWSREGCQGRG Trigger: GCCCCTGCCTTGGCACCCCTCCCGTGACCATGGCAACAGGAAACAACATTCTGGAAGGCCAAGAAGCTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199089.5 |
||
| CDS CCA 72 bp | GGCACTTCGGCATGGCGGTACCTGGTCCTGCACAAGTaGCTGCAGCTTCTTGGCCTTCCAGAATGTTGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: GTSAWRYLVLHK*LQLLGLPECCF Trigger: GAAACAACATTCTGGAAGGCCAAGAAGCTGCAGCCACTTGTGCAGGACCAGGTACCGCCATGCCGAAGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199089.5 |
||
| CDS GCA 72 bp | CTTCGGCATGGCGGTACCTGGTCCTGCACAAGTGGCTaGAGCTTCTTGGCCTTCCAGAATGTTGTTTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LRHGGTWSCTSG*SFLAFQNVVSC Trigger: ACAGGAAACAACATTCTGGAAGGCCAAGAAGCTGCAGCCACTTGTGCAGGACCAGGTACCGCCATGCCGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199089.5 |
||
| CDS CAA 72 bp | GGCGGTACCTGGTCCTGCACAAGTGGCTGCAGCTTCTaGGCCTTCCAGAATGTTGTTTCCTGTTGCCATGGT | + |
|
Preference number: 6 (lower is better) Translates to: GGTWSCTSGCSF*AFQNVVSCCHG Trigger: ACCATGGCAACAGGAAACAACATTCTGGAAGGCCAAGAAGCTGCAGCCACTTGTGCAGGACCAGGTACCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199089.5 |
||