Pregenerated sensors for CRHR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018634Ensembl transcript IDs: ENSMUST00000093925.5
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCACGGCTGGGCAGGCTTACAGGTCTGCATCCCAGGGGCAGGGATaGGAAGGCTGCCTGCCTCTGCAGACAGGCTCGCTAGTGAGCTTG | + |
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Preference number: 1 (lower is better) Translates to: STAGQAYRSASQGQG*EGCLPLQTGSLVSL Trigger: CAAGCTCACTAGCGAGCCTGTCTGCAGAGGCAGGCAGCCTTCCCATCCCTGCCCCTGGGATGCAGACCTGTAAGCCTGCCCAGCCGTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR GCA 90 bp | GGGCAGGCTTACAGGTCTGCATCCCAGGGGCAGGGATGGGAAGGCTaGCTGCCTCTGCAGACAGGCTCGCTAGTGAGCTTGCATCATTTC | + |
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Preference number: 1 (lower is better) Translates to: GQAYRSASQGQGWEG*LPLQTGSLVSLHHF Trigger: GAAATGATGCAAGCTCACTAGCGAGCCTGTCTGCAGAGGCAGGCAGCCTTCCCATCCCTGCCCCTGGGATGCAGACCTGTAAGCCTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR GCA 90 bp | TGCCCATTTCAACTTCCCAGGGAGAATGGGCAGCAGGGAGCTAGATaGCAAGGGCCCACCCCAGTGCTATGGGCTTTGTCCACGGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: CPFQLPRENGQQGAR*QGPTPVLWALSTAG Trigger: CCCAGCCGTGGACAAAGCCCATAGCACTGGGGTGGGCCCTTGGCATCTAGCTCCCTGCTGCCCATTCTCCCTGGGAAGTTGAAATGGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR GCA 90 bp | GCGCTCACAGGCCCATCAAACTGCTGCAGGGTTTCCAGCCCCCAATaGCCATTTCAACTTCCCAGGGAGAATGGGCAGCAGGGAGCTAGA | + |
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Preference number: 1 (lower is better) Translates to: ALTGPSNCCRVSSPQ*PFQLPRENGQQGAR Trigger: TCTAGCTCCCTGCTGCCCATTCTCCCTGGGAAGTTGAAATGGGCATTGGGGGCTGGAAACCCTGCAGCAGTTTGATGGGCCTGTGAGCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR GCA 90 bp | AAGCTGCTCTGGGAGAAGACAGCGCTCACAGGCCCATCAAACTGCTaGAGGGTTTCCAGCCCCCAATGCCCATTTCAACTTCCCAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: KLLWEKTALTGPSNC*RVSSPQCPFQLPRE Trigger: CTCCCTGGGAAGTTGAAATGGGCATTGGGGGCTGGAAACCCTGCAGCAGTTTGATGGGCCTGTGAGCGCTGTCTTCTCCCAGAGCAGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR GCA 90 bp | AGTAAGCTGCTCTGGGAGAAGACAGCGCTCACAGGCCCATCAAACTaGTGCAGGGTTTCCAGCCCCCAATGCCCATTTCAACTTCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: SKLLWEKTALTGPSN*CRVSSPQCPFQLPR Trigger: CCTGGGAAGTTGAAATGGGCATTGGGGGCTGGAAACCCTGCAGCAGTTTGATGGGCCTGTGAGCGCTGTCTTCTCCCAGAGCAGCTTACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR CAA 90 bp | GGATGGGAAGGCTGCCTGCCTCTGCAGACAGGCTCGCTAGTGAGCTaGCATCATTTCCCCAGCCTCGGGTCTTGGGGGCTGCTCTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: GWEGCLPLQTGSLVS*HHFPSLGSWGLLCG Trigger: GCCACAGAGCAGCCCCCAAGACCCGAGGCTGGGGAAATGATGCAAGCTCACTAGCGAGCCTGTCTGCAGAGGCAGGCAGCCTTCCCATCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR-3UTR CCA 90 bp | TCCTTCCTCATAGACTGGGCCCACTCTGGTTCCTGGCAACTCAAGTCCCCTTCCCCCAGCCTCGGGTCTTaGGGGCTGCTCTGTGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: SFLIDWAHSGSWQLKSPSPSLGS*GLLCGL Trigger: CAGGCCACAGAGCAGCCCCCAAGACCCGAGGCTGGG...GGAAGGGGACTTGAGTTGCCAGGAACCAGAGTGGGCCCAGTCTATGAGGAAGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR-3UTR GCA 90 bp | CACTCTGGTTCCTGGCAACTCAAGTCCCCTTCCCGACCCCCATCTTCTCACAGGGCAGGCTTACAGGTCTaGATCCCAGGGGCAGGGATG | + |
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Preference number: 2 (lower is better) Translates to: HSGSWQLKSPSRPPSSHRAGLQV*IPGAGM Trigger: CATCCCTGCCCCTGGGATGCAGACCTGTAAGCCTGC...CCTGTGAGAAGATGGGGGTCGGGAAGGGGACTTGAGTTGCCAGGAACCAGAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR-3UTR GCA 90 bp | TCCTTCCTCATAGACTGGGCCCACTCTGGTTCCTGGCAACTCAAGTCCCCTTCCCAGCAGGGAGCTAGATaGCAAGGGCCCACCCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: SFLIDWAHSGSWQLKSPSQQGAR*QGPTPV Trigger: CACTGGGGTGGGCCCTTGGCATCTAGCTCCCTGCTG...GGAAGGGGACTTGAGTTGCCAGGAACCAGAGTGGGCCCAGTCTATGAGGAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR-3UTR CCA 90 bp | TCCTTCCCCCAGCTTGTGACTGTGTTCAAGAGGCCAGCCACTGAAGCCAGTGGCGGCTTTGTCCACGGCTaGGCAGGCTTACAGGTCTGC | + |
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Preference number: 2 (lower is better) Translates to: SFPQLVTVFKRPATEASGGFVHG*AGLQVC Trigger: GCAGACCTGTAAGCCTGCCCAGCCGTGGACAAAGCC...GCCACTGGCTTCAGTGGCTGGCCTCTTGAACACAGTCACAAGCTGGGGGAAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR-3UTR GCA 90 bp | ACCCCCATCTTCTCACAGGTTAGAAGATACCCAGAGGTGGGAGGATTTGGGGGCGATGGGAAGGCTGCCTaGCTCTGCAGACAGGCTCGC | + |
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Preference number: 2 (lower is better) Translates to: TPIFSQVRRYPEVGGFGGDGKAA*LCRQAR Trigger: GCGAGCCTGTCTGCAGAGGCAGGCAGCCTTCCCATC...GCCCCCAAATCCTCCCACCTCTGGGTATCTTCTAACCTGTGAGAAGATGGGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR-3UTR GCA 90 bp | CTCACAGGCCCATCAAACTGCTGCAGGGTTTCCAGCCCCCAATGCCCATTTCAACAGGGATGGGAAGGCTaGCTGCCTCTGCAGACAGGC | + |
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Preference number: 2 (lower is better) Translates to: LTGPSNCCRVSSPQCPFQQGWEG*LPLQTG Trigger: GCCTGTCTGCAGAGGCAGGCAGCCTTCCCATCCCTG...TTGAAATGGGCATTGGGGGCTGGAAACCCTGCAGCAGTTTGATGGGCCTGTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR-3UTR CCA 90 bp | CACTCTGGTTCCTGGCAACTCAAGTCCCCTTCCCGACCCCCATCTTCTCACAGGGAAGATACCCAGAGGTaGGAGGATTTGGGGGCGAGG | + |
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Preference number: 2 (lower is better) Translates to: HSGSWQLKSPSRPPSSHREDTQR*EDLGAR Trigger: CCTCGCCCCCAAATCCTCCCACCTCTGGGTATCTTC...CCTGTGAGAAGATGGGGGTCGGGAAGGGGACTTGAGTTGCCAGGAACCAGAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR-3UTR TCA 90 bp | GCAAAGCAGCAAGGCAGGGCTTTCCAGTGGCAGTGCCACAGTGCTGATGAAATCCTGGTGGCTCAGGAGTaGCTTGTAGGGAGGTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: AKQQGRAFQWQCHSADEILVAQE*LVGRWS Trigger: ACTCCACCTCCCTACAAGTCACTCCTGAGCCACCAG...GATTTCATCAGCACTGTGGCACTGCCACTGGAAAGCCCTGCCTTGCTGCTTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR-3UTR CCA 90 bp | CACTCTGGTTCCTGGCAACTCAAGTCCCCTTCCCGACCCCCATCTTCTCACAGGTTCAGTAAGCTGCTCTaGGAGAAGACAGCGCTCACA | + |
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Preference number: 2 (lower is better) Translates to: HSGSWQLKSPSRPPSSHRFSKLL*EKTALT Trigger: TGTGAGCGCTGTCTTCTCCCAGAGCAGCTTACTGAA...CCTGTGAGAAGATGGGGGTCGGGAAGGGGACTTGAGTTGCCAGGAACCAGAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR-3UTR GCA 90 bp | CTCAAGTCCCCTTCCCGACCCCCATCTTCTCACAGGTTAGAAGATACCCAGAGGGCTTTCCAGTGGCAGTaGCACAGTGCTGATGAAATC | + |
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Preference number: 2 (lower is better) Translates to: LKSPSRPPSSHRLEDTQRAFQWQ*HSADEI Trigger: GATTTCATCAGCACTGTGGCACTGCCACTGGAAAGC...CCTCTGGGTATCTTCTAACCTGTGAGAAGATGGGGGTCGGGAAGGGGACTTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR CCA 72 bp | AGGGCCCACCCCAGTGCTATGGGCTTTGTCCACGGCTaGGCAGGCTTACAGGTCTGCATCCCAGGGGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: RAHPSAMGFVHG*AGLQVCIPGAG Trigger: CCCTGCCCCTGGGATGCAGACCTGTAAGCCTGCCCAGCCGTGGACAAAGCCCATAGCACTGGGGTGGGCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR GCA 72 bp | ATGGGCTTTGTCCACGGCTGGGCAGGCTTACAGGTCTaGATCCCAGGGGCAGGGATGGGAAGGCTGCCTGCC | + |
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Preference number: 3 (lower is better) Translates to: MGFVHGWAGLQV*IPGAGMGRLPA Trigger: GGCAGGCAGCCTTCCCATCCCTGCCCCTGGGATGCAGACCTGTAAGCCTGCCCAGCCGTGGACAAAGCCCAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR TCA 72 bp | CCCCCAGCTTGTGACTGTGTTCAAGAGGCCAGCCACTaGAGCCAGTGGCCTGGGTACCCAGGGGCCACTCCT | + |
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Preference number: 3 (lower is better) Translates to: PPACDCVQEASH*SQWPGYPGATP Trigger: AGGAGTGGCCCCTGGGTACCCAGGCCACTGGCTTCAGTGGCTGGCCTCTTGAACACAGTCACAAGCTGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR CCA 72 bp | CAGGGGCCACTCCTTCCTCATAGACTGGGCCCACTCTaGTTCCTGGCAACTCAAGTCCCCTTCCCGACCCCC | + |
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Preference number: 3 (lower is better) Translates to: QGPLLPHRLGPL*FLATQVPFPTP Trigger: GGGGGTCGGGAAGGGGACTTGAGTTGCCAGGAACCAGAGTGGGCCCAGTCTATGAGGAAGGAGTGGCCCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR GCA 72 bp | TACAGGTCTGCATCCCAGGGGCAGGGATGGGAAGGCTaGCTGCCTCTGCAGACAGGCTCGCTAGTGAGCTTG | + |
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Preference number: 3 (lower is better) Translates to: YRSASQGQGWEG*LPLQTGSLVSL Trigger: CAAGCTCACTAGCGAGCCTGTCTGCAGAGGCAGGCAGCCTTCCCATCCCTGCCCCTGGGATGCAGACCTGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR-3UTR CAA 90 bp | CCCAAGGCATCGCTAACACTCAGAGACTTTACAGTCTCAGAAGGGAGTTTTCCACCCCAGCCTCGGGTCTaGGGGGCTGCTCTGTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: PKASLTLRDFTVSEGSFPPQPRV*GAALWP Trigger: AGGCCACAGAGCAGCCCCCAAGACCCGAGGCTGGGG...TGGAAAACTCCCTTCTGAGACTGTAAAGTCTCTGAGTGTTAGCGATGCCTTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR GCA 72 bp | GGCCCATCAAACTGCTGCAGGGTTTCCAGCCCCCAATaGCCATTTCAACTTCCCAGGGAGAATGGGCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: GPSNCCRVSSPQ*PFQLPRENGQQ Trigger: CTGCTGCCCATTCTCCCTGGGAAGTTGAAATGGGCATTGGGGGCTGGAAACCCTGCAGCAGTTTGATGGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR CCA 72 bp | GGGAGGATTTGGGGGCGAGGGGACCGTTGCTGTCAGTaGATAAGTGACAGAAAGCTGGCTTGGCCTGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: GRIWGRGDRCCQ*ISDRKLAWPAE Trigger: TTCTGCAGGCCAAGCCAGCTTTCTGTCACTTATCCACTGACAGCAACGGTCCCCTCGCCCCCAAATCCTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR CCA 72 bp | CACTCCTTCCTCATAGACTGGGCCCACTCTGGTTCCTaGCAACTCAAGTCCCCTTCCCGACCCCCATCTTCT | + |
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Preference number: 3 (lower is better) Translates to: HSFLIDWAHSGS*QLKSPSRPPSS Trigger: AGAAGATGGGGGTCGGGAAGGGGACTTGAGTTGCCAGGAACCAGAGTGGGCCCAGTCTATGAGGAAGGAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR TCA 72 bp | TGCCCCAGGGTAACAGTTGGCCTCCCCAACAGCTCCTaGAGACGACAGATCTTCAGTAAGCTGCTCTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: CPRVTVGLPNSS*RRQIFSKLLWE Trigger: CTCCCAGAGCAGCTTACTGAAGATCTGTCGTCTTCAGGAGCTGTTGGGGAGGCCAACTGTTACCCTGGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR GCA 72 bp | CTCTGGGAGAAGACAGCGCTCACAGGCCCATCAAACTaGTGCAGGGTTTCCAGCCCCCAATGCCCATTTCAA | + |
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Preference number: 3 (lower is better) Translates to: LWEKTALTGPSN*CRVSSPQCPFQ Trigger: TTGAAATGGGCATTGGGGGCTGGAAACCCTGCAGCAGTTTGATGGGCCTGTGAGCGCTGTCTTCTCCCAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR GCA 72 bp | TGGGAGAAGACAGCGCTCACAGGCCCATCAAACTGCTaGAGGGTTTCCAGCCCCCAATGCCCATTTCAACTT | + |
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Preference number: 3 (lower is better) Translates to: WEKTALTGPSNC*RVSSPQCPFQL Trigger: AAGTTGAAATGGGCATTGGGGGCTGGAAACCCTGCAGCAGTTTGATGGGCCTGTGAGCGCTGTCTTCTCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR GCA 72 bp | CCAACAGCTCCTGAAGACGACAGATCTTCAGTAAGCTaGTCTGGGAGAAGACAGCGCTCACAGGCCCATCAA | + |
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Preference number: 3 (lower is better) Translates to: PTAPEDDRSSVS*SGRRQRSQAHQ Trigger: TTGATGGGCCTGTGAGCGCTGTCTTCTCCCAGAGCAGCTTACTGAAGATCTGTCGTCTTCAGGAGCTGTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR TCA 72 bp | TTGGGGGCGAGGGGACCGTTGCTGTCAGTGGATAAGTaGCAGAAAGCTGGCTTGGCCTGCAGAATAGTAAAT | + |
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Preference number: 3 (lower is better) Translates to: LGARGPLLSVDK*QKAGLACRIVN Trigger: ATTTACTATTCTGCAGGCCAAGCCAGCTTTCTGTCACTTATCCACTGACAGCAACGGTCCCCTCGCCCCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR GCA 90 bp | AGATGCCAAGGGCCCACCCCAGTGCTATGGGCTTTGTCCACGGCTGGGCAGGCTTGCACCAGGCCACGTTaGTCTGGTGGACCTCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: RCQGPTPVLWALSTAGQACTRPR*SGGPRG Trigger: GCCCCGAGGTCCACCAGAGCAACGTGGCCTGGTGCA...AGCCTGCCCAGCCGTGGACAAAGCCCATAGCACTGGGGTGGGCCCTTGGCATCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR TCA 90 bp | CCAGTGGCCTGGGTACCCAGGGGCCACTCCTTCCTCATAGACTGGGCCCACTCTGCCAGCAGGTGCCAATaGGGTCCACGGAGGCATTGC | + |
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Preference number: 4 (lower is better) Translates to: PVAWVPRGHSFLIDWAHSASRCQ*GPRRHC Trigger: GCAATGCCTCCGTGGACCTCATTGGCACCTGCTGGC...AGAGTGGGCCCAGTCTATGAGGAAGGAGTGGCCCCTGGGTACCCAGGCCACTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR CCA 90 bp | CCCCAGTGCTATGGGCTTTGTCCACGGCTGGGCAGGCTTACAGGTCTGCATCCCGCCACGTTGCTCTGGTaGACCTCGGGGCTCACGGTG | + |
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Preference number: 4 (lower is better) Translates to: PQCYGLCPRLGRLTGLHPATLLW*TSGLTV Trigger: CACCGTGAGCCCCGAGGTCCACCAGAGCAACGTGGC...GGGATGCAGACCTGTAAGCCTGCCCAGCCGTGGACAAAGCCCATAGCACTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR CAA 72 bp | GGCTGCCTGCCTCTGCAGACAGGCTCGCTAGTGAGCTaGCATCATTTCCCCAGCCTCGGGTCTTGGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GCLPLQTGSLVS*HHFPSLGSWGL Trigger: CAGCCCCCAAGACCCGAGGCTGGGGAAATGATGCAAGCTCACTAGCGAGCCTGTCTGCAGAGGCAGGCAGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR CCA 90 bp | AAGACAGCGCTCACAGGCCCATCAAACTGCTGCAGGGTTTCCAGCCCCCAATGCAGGTGGGGATGGACATaGCGCGGGCCACTCGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: KTALTGPSNCCRVSSPQCRWGWT*RGPLGL Trigger: GAGCCCGAGTGGCCCGCGCCATGTCCATCCCCACCT...GCATTGGGGGCTGGAAACCCTGCAGCAGTTTGATGGGCCTGTGAGCGCTGTCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR CCA 90 bp | CACTCTGGTTCCTGGCAACTCAAGTCCCCTTCCCGACCCCCATCTTCTCACAGGTGGGGGAGGTGGGGATaGACATGGCGCGGGCCACTC | + |
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Preference number: 4 (lower is better) Translates to: HSGSWQLKSPSRPPSSHRWGRWG*TWRGPL Trigger: GAGTGGCCCGCGCCATGTCCATCCCCACCTCCCCCA...CCTGTGAGAAGATGGGGGTCGGGAAGGGGACTTGAGTTGCCAGGAACCAGAGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR CCA 90 bp | AGAGGTGGGAGGATTTGGGGGCGAGGGGACCGTTGCTGTCAGTGGATAAGTGACCAGGCCACGTTGCTCTaGTGGACCTCGGGGCTCACG | + |
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Preference number: 4 (lower is better) Translates to: RGGRIWGRGDRCCQWISDQATLL*WTSGLT Trigger: CGTGAGCCCCGAGGTCCACCAGAGCAACGTGGCCTG...GTCACTTATCCACTGACAGCAACGGTCCCCTCGCCCCCAAATCCTCCCACCTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR GCA 90 bp | GCAAAGCAGCAAGGCAGGGCTTTCCAGTGGCAGTGCCACAGTGCTGATGAAATCGGCCGAACCACCAACTaGCCTGCAGGGCTCCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: AKQQGRAFQWQCHSADEIGRTTN*PAGLLG Trigger: GCCCAGGAGCCCTGCAGGGCAGTTGGTGGTTCGGCC...GATTTCATCAGCACTGTGGCACTGCCACTGGAAAGCCCTGCCTTGCTGCTTTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR GCA 90 bp | GCTTTGTCCACGGCTGGGCAGGCTTACAGGTCTGCATCCCAGGGGCAGGGATGGAGACGAACATCCACTTaGGCAGACGGTCGGTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: ALSTAGQAYRSASQGQGWRRTST*ADGRWS Trigger: ACTCCACCGACCGTCTGCGCAAGTGGATGTTCGTCT...CCATCCCTGCCCCTGGGATGCAGACCTGTAAGCCTGCCCAGCCGTGGACAAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR CCA 90 bp | AGAGGTGGGAGGATTTGGGGGCGAGGGGACCGTTGCTGTCAGTGGATAAGTGACGATCCTGGAGGGAGGTaGAGACGGGGTTCAGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: RGGRIWGRGDRCCQWISDDPGGR*RRGSAP Trigger: TGGGGCTGAACCCCGTCTCCACCTCCCTCCAGGATC...GTCACTTATCCACTGACAGCAACGGTCCCCTCGCCCCCAAATCCTCCCACCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR CCA 90 bp | CAGCAAGGCAGGGCTTTCCAGTGGCAGTGCCACAGTGCTGATGAAATCCTGGTGCTGCCCAGCTGCCGTTaGCCAGGCATTCCCGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: QQGRAFQWQCHSADEILVLPSCR*PGIPGS Trigger: GCTACCGGGAATGCCTGGCCAACGGCAGCTGGGCAG...CACCAGGATTTCATCAGCACTGTGGCACTGCCACTGGAAAGCCCTGCCTTGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR TCA 90 bp | CAAGTCCCCTTCCCGACCCCCATCTTCTCACAGGTTAGAAGATACCCAGAGGTGCCTCGGGGCTCACGGTaGGCTGGACCACAAACCACG | + |
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Preference number: 4 (lower is better) Translates to: QVPFPTPIFSQVRRYPEVPRGSR*AGPQTT Trigger: CGTGGTTTGTGGTCCAGCTCACCGTGAGCCCCGAGG...CACCTCTGGGTATCTTCTAACCTGTGAGAAGATGGGGGTCGGGAAGGGGACTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR TCA 90 bp | TCCTTCCCCCAGCTTGTGACTGTGTTCAAGAGGCCAGCCACTGAAGCCAGTGGCTGGCCCAAGCCACAATaGTGGGGAAAGGCACACCCC | + |
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Preference number: 4 (lower is better) Translates to: SFPQLVTVFKRPATEASGWPKPQ*WGKAHP Trigger: GGGGTGTGCCTTTCCCCATCATTGTGGCTTGGGCCA...GCCACTGGCTTCAGTGGCTGGCCTCTTGAACACAGTCACAAGCTGGGGGAAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR TCA 90 bp | GCTTTGTCCACGGCTGGGCAGGCTTACAGGTCTGCATCCCAGGGGCAGGGATGGGACACGAAGAAGCCCTaGAAGGACTCCAGGAAAGAG | + |
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Preference number: 4 (lower is better) Translates to: ALSTAGQAYRSASQGQGWDTKKP*KDSRKE Trigger: CTCTTTCCTGGAGTCCTTTCAGGGCTTCTTCGTGTC...CCATCCCTGCCCCTGGGATGCAGACCTGTAAGCCTGCCCAGCCGTGGACAAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR GCA 90 bp | ACCCCAGTGCTATGGGCTTTGTCCACGGCTGGGCAGGCTTACAGGTCTGCATCCATGGAGTGCTTGTCCTaGCATCGCCGCCACCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: TPVLWALSTAGQAYRSASMECLS*HRRHLF Trigger: GAAGAGGTGGCGGCGATGGCAGGACAAGCACTCCAT...GGATGCAGACCTGTAAGCCTGCCCAGCCGTGGACAAAGCCCATAGCACTGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR TCA 90 bp | CAATGCCCATTTCAACTTCCCAGGGAGAATGGGCAGCAGGGAGCTAGATGCCAAGGGCCACTCGGGCTCTaGTGGAGTGCTTGTCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: QCPFQLPRENGQQGARCQGPLGL*WSACPA Trigger: GGCAGGACAAGCACTCCATCAGAGCCCGAGTGGCCC...TTGGCATCTAGCTCCCTGCTGCCCATTCTCCCTGGGAAGTTGAAATGGGCATTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR GCA 90 bp | GTGACAGAAAGCTGGCTTGGCCTGCAGAATAGTAAATGTCTAAAGGTGCAGGGCCACGGGCTGCCCAGCTaGCGTTGGCCAGGCATTCCC | + |
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Preference number: 4 (lower is better) Translates to: VTESWLGLQNSKCLKVQGHGLPS*RWPGIP Trigger: GGGAATGCCTGGCCAACGGCAGCTGGGCAGCCCGTG...GCCCTGCACCTTTAGACATTTACTATTCTGCAGGCCAAGCCAGCTTTCTGTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR TCA 90 bp | GGCTCGCTAGTGAGCTTGCATCATTTCCCCAGCCTCGGGTCTTGGGGGCTGCTCACAGCCTTCCTGTACTaGATAGTCTCAGATGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: GSLVSLHHFPSLGSWGLLTAFLY*IVSDVV Trigger: CACCACATCTGAGACTATTCAGTACAGGAAGGCTGT...GAGCAGCCCCCAAGACCCGAGGCTGGGGAAATGATGCAAGCTCACTAGCGAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR CCA 90 bp | GGTGGCTCAGGAGTGACTTGTAGGGAGGTGGAGTGCCATCTGATGACGTTCCCAGACTGCTTGATGCTGTaGAAGCTGACTCTGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: GGSGVTCREVECHLMTFPDCLML*KLTLVG Trigger: CCCCACCAGAGTCAGCTTCCACAGCATCAAGCAGTC...TGGGAACGTCATCAGATGGCACTCCACCTCCCTACAAGTCACTCCTGAGCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| 3UTR CAA 72 bp | GTTGTCCCAGGAGCCACCTGTCGCTGGTCAGGGCACTaGAATAGATCCTTCCCCCAGCTTGTGACTGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: VVPGATCRWSGH*NRSFPQLVTVF Trigger: GAACACAGTCACAAGCTGGGGGAAGGATCTATTCAAGTGCCCTGACCAGCGACAGGTGGCTCCTGGGACAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR GCA 90 bp | TCCTTCCTCATAGACTGGGCCCACTCTGGTTCCTGGCAACTCAAGTCCCCTTCCCACACTGCTGTGGACTaGTTGATGCTGTGGAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: SFLIDWAHSGSWQLKSPSHTAVD*LMLWKL Trigger: CAGCTTCCACAGCATCAAGCAGTCCACAGCAGTGTG...GGAAGGGGACTTGAGTTGCCAGGAACCAGAGTGGGCCCAGTCTATGAGGAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR CCA 90 bp | AGAGGTGGGAGGATTTGGGGGCGAGGGGACCGTTGCTGTCAGTGGATAAGTGACGAGATGAGGTTCCAGTaGATGATGTTCCTCAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: RGGRIWGRGDRCCQWISDEMRFQ*MMFLRH Trigger: GTGCCTGAGGAACATCATCCACTGGAACCTCATCTC...GTCACTTATCCACTGACAGCAACGGTCCCCTCGCCCCCAAATCCTCCCACCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR CCA 90 bp | CAATGCCCATTTCAACTTCCCAGGGAGAATGGGCAGCAGGGAGCTAGATGCCAAGCAAGAGCACCAGAGTaGCCTTCACAGCCTTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: QCPFQLPRENGQQGARCQARAPE*PSQPSC Trigger: ACAGGAAGGCTGTGAAGGCCACTCTGGTGCTCTTGC...TTGGCATCTAGCTCCCTGCTGCCCATTCTCCCTGGGAAGTTGAAATGGGCATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR CCA 90 bp | ACAGAAAGCTGGCTTGGCCTGCAGAATAGTAAATGTCTAAAGGTGCAGGGCAGCGCCACCTCTTCCGGATaGCAGAGCGGACCTCACTGT | + |
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Preference number: 4 (lower is better) Translates to: TESWLGLQNSKCLKVQGSATSSG*QSGPHC Trigger: ACAGTGAGGTCCGCTCTGCCATCCGGAAGAGGTGGC...GCTGCCCTGCACCTTTAGACATTTACTATTCTGCAGGCCAAGCCAGCTTTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR TCA 90 bp | CTTTCCAGTGGCAGTGCCACAGTGCTGATGAAATCCTGGTGGCTCAGGAGTGACTCTTCTTCTCTTCGTTaGGAATCTCCTGGCACTCAG | + |
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Preference number: 4 (lower is better) Translates to: LSSGSATVLMKSWWLRSDSSSLR*ESPGTQ Trigger: CTGAGTGCCAGGAGATTCTCAACGAAGAGAAGAAGA...GTCACTCCTGAGCCACCAGGATTTCATCAGCACTGTGGCACTGCCACTGGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR GCA 90 bp | GACAGATCTTCAGTAAGCTGCTCTGGGAGAAGACAGCGCTCACAGGCCCATCAACTCAGATGTGGTGGATaGTCGGAGTTTGGTCATGAG | + |
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Preference number: 4 (lower is better) Translates to: DRSSVSCSGRRQRSQAHQLRCGG*SEFGHE Trigger: CTCATGACCAAACTCCGAGCATCCACCACATCTGAG...TTGATGGGCCTGTGAGCGCTGTCTTCTCCCAGAGCAGCTTACTGAAGATCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS GCA 90 bp | GACACCGTAGAAAAAGGCAGGGCAGGGCCGAACCACCAACTGCCCTaGAGGGCTCCTGGGCCAGCAGGTGCCAATGAGGTCCACGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: DTVEKGRAGPNHQLP*RAPGPAGANEVHGG Trigger: GCCTCCGTGGACCTCATTGGCACCTGCTGGCCCAGGAGCCCTGCAGGGCAGTTGGTGGTTCGGCCCTGCCCTGCCTTTTTCTACGGTGTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR CAA 90 bp | CAGGGAGCTAGATGCCAAGGGCCCACCCCAGTGCTATGGGCTTTGTCCACGGCTCTGCACCAGGCCACGTaGCTCTGGTGGACCTCGGGG | + |
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Preference number: 5 (lower is better) Translates to: QGARCQGPTPVLWALSTALHQAT*LWWTSG Trigger: CCCCGAGGTCCACCAGAGCAACGTGGCCTGGTGCAG...AGCCGTGGACAAAGCCCATAGCACTGGGGTGGGCCCTTGGCATCTAGCTCCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS TCA 90 bp | GAACCACCAACTGCCCTGCAGGGCTCCTGGGCCAGCAGGTGCCAATaGGGTCCACGGAGGCATTGCACTGCAGGCCAGAGACATTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: EPPTALQGSWASRCQ*GPRRHCTAGQRHCW Trigger: CCAGCAATGTCTCTGGCCTGCAGTGCAATGCCTCCGTGGACCTCATTGGCACCTGCTGGCCCAGGAGCCCTGCAGGGCAGTTGGTGGTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS CCA 90 bp | CACCAGGCCACGTTGCTCTGGTGGACCTCGGGGCTCACGGTGAGCTaGACCACAAACCACGTGGCGTTGCGCAGGATGAAAGCCGAGATG | + |
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Preference number: 5 (lower is better) Translates to: HQATLLWWTSGLTVS*TTNHVALRRMKAEM Trigger: CATCTCGGCTTTCATCCTGCGCAACGCCACGTGGTTTGTGGTCCAGCTCACCGTGAGCCCCGAGGTCCACCAGAGCAACGTGGCCTGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR CAA 90 bp | CCCCAGTGCTATGGGCTTTGTCCACGGCTGGGCAGGCTTACAGGTCTGCATCCCACAAACCACGTGGCGTaGCGCAGGATGAAAGCCGAG | + |
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Preference number: 5 (lower is better) Translates to: PQCYGLCPRLGRLTGLHPTNHVA*RRMKAE Trigger: CTCGGCTTTCATCCTGCGCAACGCCACGTGGTTTGT...GGGATGCAGACCTGTAAGCCTGCCCAGCCGTGGACAAAGCCCATAGCACTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR CAA 90 bp | CCATTTCAACTTCCCAGGGAGAATGGGCAGCAGGGAGCTAGATGCCAAGGGCCCCAGACGAACATCCACTaGCGCAGACGGTCGGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: PFQLPRENGQQGARCQGPQTNIH*RRRSVE Trigger: CTCCACCGACCGTCTGCGCAAGTGGATGTTCGTCTG...GGGCCCTTGGCATCTAGCTCCCTGCTGCCCATTCTCCCTGGGAAGTTGAAATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR CAA 90 bp | GGCTCGCTAGTGAGCTTGCATCATTTCCCCAGCCTCGGGTCTTGGGGGCTGCTCACTGCTGTGGACTGCTaGATGCTGTGGAAGCTGACT | + |
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Preference number: 5 (lower is better) Translates to: GSLVSLHHFPSLGSWGLLTAVDC*MLWKLT Trigger: AGTCAGCTTCCACAGCATCAAGCAGTCCACAGCAGT...GAGCAGCCCCCAAGACCCGAGGCTGGGGAAATGATGCAAGCTCACTAGCGAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS CCA 90 bp | TCTCCTGGCACTCAGAATAATTCACACGGGCTGCCCAGCTGCCGTTaGCCAGGCATTCCCGGTAGCCATTGTTTGTGGTGTTGTAGCGGA | + |
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Preference number: 5 (lower is better) Translates to: SPGTQNNSHGLPSCR*PGIPGSHCLWCCSG Trigger: TCCGCTACAACACCACAAACAATGGCTACCGGGAATGCCTGGCCAACGGCAGCTGGGCAGCCCGTGTGAATTATTCTGAGTGCCAGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR CAA 90 bp | CCAGTGGCCTGGGTACCCAGGGGCCACTCCTTCCTCATAGACTGGGCCCACTCTAAGAGAAAGATAAAGTaGATCAGCAGGACCAGGATC | + |
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Preference number: 5 (lower is better) Translates to: PVAWVPRGHSFLIDWAHSKRKIK*ISRTRI Trigger: GATCCTGGTCCTGCTGATCAACTTTATCTTTCTCTT...AGAGTGGGCCCAGTCTATGAGGAAGGAGTGGCCCCTGGGTACCCAGGCCACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR CAA 90 bp | TTGGCCTCCCCAACAGCTCCTGAAGACGACAGATCTTCAGTAAGCTGCTCTGGGGTGGATGCTCGGAGTTaGGTCATGAGGATGCGGACA | + |
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Preference number: 5 (lower is better) Translates to: LASPTAPEDDRSSVSCSGVDARS*VMRMRT Trigger: TGTCCGCATCCTCATGACCAAACTCCGAGCATCCAC...CCCAGAGCAGCTTACTGAAGATCTGTCGTCTTCAGGAGCTGTTGGGGAGGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS GCA 90 bp | CTCTTCGTTGAGAATCTCCTGGCACTCAGAATAATTCACACGGGCTaGCCAGCTGCCGTTGGCCAGGCATTCCCGGTAGCCATTGTTTGT | + |
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Preference number: 5 (lower is better) Translates to: LFVENLLALRIIHTG*PAAVGQAFPVAIVC Trigger: ACAAACAATGGCTACCGGGAATGCCTGGCCAACGGCAGCTGGGCAGCCCGTGTGAATTATTCTGAGTGCCAGGAGATTCTCAACGAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR CAA 90 bp | CAATGCCCATTTCAACTTCCCAGGGAGAATGGGCAGCAGGGAGCTAGATGCCAATATACTCCAGGACGTTaGCCAAACCAGCACTTTTCA | + |
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Preference number: 5 (lower is better) Translates to: QCPFQLPRENGQQGARCQYTPGR*PNQHFS Trigger: TGAAAAGTGCTGGTTTGGCAAACGTCCTGGAGTATA...TTGGCATCTAGCTCCCTGCTGCCCATTCTCCCTGGGAAGTTGAAATGGGCATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS-3UTR CAA 90 bp | TTGGCCTCCCCAACAGCTCCTGAAGACGACAGATCTTCAGTAAGCTGCTCTGGGAGGATGCGGACAATGTaGAAGAGAAAGATAAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: LASPTAPEDDRSSVSCSGRMRTM*KRKIKL Trigger: CAACTTTATCTTTCTCTTCAACATTGTCCGCATCCT...CCCAGAGCAGCTTACTGAAGATCTGTCGTCTTCAGGAGCTGTTGGGGAGGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS CCA 72 bp | GCTGTCACCAGCCTGCACCAGGCCACGTTGCTCTGGTaGACCTCGGGGCTCACGGTGAGCTGGACCACAAAC | + |
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Preference number: 6 (lower is better) Translates to: AVTSLHQATLLW*TSGLTVSWTTN Trigger: GTTTGTGGTCCAGCTCACCGTGAGCCCCGAGGTCCACCAGAGCAACGTGGCCTGGTGCAGGCTGGTGACAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS CCA 72 bp | CCACGGAGGCATTGCACTGCAGGCCAGAGACATTGCTaGCCAGGGACAGGCTCTCACACTGCTGATCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: PRRHCTAGQRHC*PGTGSHTADPG Trigger: TCCAGGATCAGCAGTGTGAGAGCCTGTCCCTGGCCAGCAATGTCTCTGGCCTGCAGTGCAATGCCTCCGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS GCA 72 bp | GAGAATCTCCTGGCACTCAGAATAATTCACACGGGCTaGCCAGCTGCCGTTGGCCAGGCATTCCCGGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: ENLLALRIIHTG*PAAVGQAFPVA Trigger: GGCTACCGGGAATGCCTGGCCAACGGCAGCTGGGCAGCCCGTGTGAATTATTCTGAGTGCCAGGAGATTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS GCA 72 bp | CCTGGCACTCAGAATAATTCACACGGGCTGCCCAGCTaGCGTTGGCCAGGCATTCCCGGTAGCCATTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: PGTQNNSHGLPS*RWPGIPGSHCL Trigger: CAAACAATGGCTACCGGGAATGCCTGGCCAACGGCAGCTGGGCAGCCCGTGTGAATTATTCTGAGTGCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS CAA 72 bp | AAAGGCACACCCCAGCCGATGCAGACGAACATCCACTaGCGCAGACGGTCGGTGGAGTACGTGAGTACGATG | + |
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Preference number: 6 (lower is better) Translates to: KGTPQPMQTNIH*RRRSVEYVSTM Trigger: CATCGTACTCACGTACTCCACCGACCGTCTGCGCAAGTGGATGTTCGTCTGCATCGGCTGGGGTGTGCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS CCA 72 bp | ACTCAGAATAATTCACACGGGCTGCCCAGCTGCCGTTaGCCAGGCATTCCCGGTAGCCATTGTTTGTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: TQNNSHGLPSCR*PGIPGSHCLWC Trigger: ACACCACAAACAATGGCTACCGGGAATGCCTGGCCAACGGCAGCTGGGCAGCCCGTGTGAATTATTCTGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS CAA 72 bp | GATGCTCGGAGTTTGGTCATGAGGATGCGGACAATGTaGAAGAGAAAGATAAAGTTGATCAGCAGGACCAGG | + |
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Preference number: 6 (lower is better) Translates to: DARSLVMRMRTM*KRKIKLISRTR Trigger: CCTGGTCCTGCTGATCAACTTTATCTTTCTCTTCAACATTGTCCGCATCCTCATGACCAAACTCCGAGCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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| CDS TCA 72 bp | CAATGTGGTAGTGCACTTTGCTCTTCTTCTCTTCGTTaGGAATCTCCTGGCACTCAGAATAATTCACACGGG | + |
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Preference number: 6 (lower is better) Translates to: QCGSALCSSSLR*ESPGTQNNSHG Trigger: CCCGTGTGAATTATTCTGAGTGCCAGGAGATTCTCAACGAAGAGAAGAAGAGCAAAGTGCACTACCACATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093925.5 |
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