Pregenerated sensors for CRHBP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021680Ensembl transcript IDs: ENSMUST00000045583.9, ENSMUST00000221025.2
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTTTCCCCAAGGGTCCAGTGACCCTTGTTCCACCACTTTGTGTTTaGAGCATACCAAAAGCACCAAGCATGTCCACCAACAACCTGTTG | + |
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Preference number: 1 (lower is better) Translates to: TFPKGPVTLVPPLCV*SIPKAPSMSTNNLL Trigger: CAACAGGTTGTTGGTGGACATGCTTGGTGCTTTTGGTATGCTGCAAACACAAAGTGGTGGAACAAGGGTCACTGGACCCTTGGGGAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| 3UTR CCA 90 bp | AAAAGGAAGCAAAATTGGAACTCATGTGTGCACGTGTTCAAGGCCTaGAGTACTGATTGGAAGACTTTCCATTTGCTGCCCATGAAGATC | + |
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Preference number: 1 (lower is better) Translates to: KRKQNWNSCVHVFKA*STDWKTFHLLPMKI Trigger: GATCTTCATGGGCAGCAAATGGAAAGTCTTCCAATCAGTACTCCAGGCCTTGAACACGTGCACACATGAGTTCCAATTTTGCTTCCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGACCCTTGTTCCACCACTTTGTGTTTGCAGCATACCAAAAGCACCAAGCATCACGTGTTCAAGGCCTaGAGTACTGATTGGAAGACT | + |
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Preference number: 2 (lower is better) Translates to: SDPCSTTLCLQHTKSTKHHVFKA*STDWKT Trigger: AGTCTTCCAATCAGTACTCCAGGCCTTGAACACGTG...ATGCTTGGTGCTTTTGGTATGCTGCAAACACAAAGTGGTGGAACAAGGGTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTCTTTTCCCACTTTCCCCAAGGGTCCAGTGACCCTTGTTCCACCACTTTGTAAAAGGAAGCAAAATTaGAACTCATGTGTGCACGTG | + |
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Preference number: 2 (lower is better) Translates to: SSFPTFPKGPVTLVPPLCKRKQN*NSCVHV Trigger: CACGTGCACACATGAGTTCCAATTTTGCTTCCTTTT...ACAAAGTGGTGGAACAAGGGTCACTGGACCCTTGGGGAAAGTGGGAAAAGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| 3UTR-3UTR CCA 90 bp | ACATTTGGACTTATGAATGGAAAGGGGGAGGGTTGTTCCCATGCTACAAAGTGTCTGTGGAGAACTCACTaGGCTAACAGCATGTCAATC | + |
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Preference number: 2 (lower is better) Translates to: TFGLMNGKGEGCSHATKCLWRTH*ANSMSI Trigger: GATTGACATGCTGTTAGCCCAGTGAGTTCTCCACAG...ACACTTTGTAGCATGGGAACAACCCTCCCCCTTTCCATTCATAAGTCCAAATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| 3UTR-3UTR CCA 90 bp | CACCATTTCTCTGTCTTTGGAGCATCTGCCCTTGCACATAGCTCTTTTCCCACTAAAAGGAAGCAAAATTaGAACTCATGTGTGCACGTG | + |
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Preference number: 2 (lower is better) Translates to: HHFSVFGASALAHSSFPTKRKQN*NSCVHV Trigger: CACGTGCACACATGAGTTCCAATTTTGCTTCCTTTT...AGTGGGAAAAGAGCTATGTGCAAGGGCAGATGCTCCAAAGACAGAGAAATGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| 3UTR GCA 72 bp | AAGGGTCCAGTGACCCTTGTTCCACCACTTTGTGTTTaGAGCATACCAAAAGCACCAAGCATGTCCACCAAC | + |
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Preference number: 3 (lower is better) Translates to: KGPVTLVPPLCV*SIPKAPSMSTN Trigger: GTTGGTGGACATGCTTGGTGCTTTTGGTATGCTGCAAACACAAAGTGGTGGAACAAGGGTCACTGGACCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| 3UTR TCA 72 bp | GAACTCATGTGTGCACGTGTTCAAGGCCTGGAGTACTaGTTGGAAGACTTTCCATTTGCTGCCCATGAAGAT | + |
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Preference number: 3 (lower is better) Translates to: ELMCARVQGLEY*LEDFPFAAHED Trigger: ATCTTCATGGGCAGCAAATGGAAAGTCTTCCAATCAGTACTCCAGGCCTTGAACACGTGCACACATGAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| 3UTR CCA 72 bp | TCATGTGTGCACGTGTTCAAGGCCTGGAGTACTGATTaGAAGACTTTCCATTTGCTGCCCATGAAGATCACA | + |
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Preference number: 3 (lower is better) Translates to: SCVHVFKAWSTD*KTFHLLPMKIT Trigger: TGTGATCTTCATGGGCAGCAAATGGAAAGTCTTCCAATCAGTACTCCAGGCCTTGAACACGTGCACACATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| 3UTR CCA 72 bp | CAAAATTGGAACTCATGTGTGCACGTGTTCAAGGCCTaGAGTACTGATTGGAAGACTTTCCATTTGCTGCCC | + |
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Preference number: 3 (lower is better) Translates to: QNWNSCVHVFKA*STDWKTFHLLP Trigger: GGGCAGCAAATGGAAAGTCTTCCAATCAGTACTCCAGGCCTTGAACACGTGCACACATGAGTTCCAATTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| 3UTR TCA 72 bp | GGAGTACTGATTGGAAGACTTTCCATTTGCTGCCCATaGAGATCACATACAGTAACTGTGGAGAACTCACTG | + |
|
Preference number: 3 (lower is better) Translates to: GVLIGRLSICCP*RSHTVTVENSL Trigger: CAGTGAGTTCTCCACAGTTACTGTATGTGATCTTCATGGGCAGCAAATGGAAAGTCTTCCAATCAGTACTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| 3UTR-3UTR CAA 90 bp | TTTATTTACATTTGGACTTATGAATGGAAAGGGGGAGGGTTGTTCCCATGCTACTGGAAGACTTTCCATTaGCTGCCCATGAAGATCACA | + |
|
Preference number: 3 (lower is better) Translates to: FIYIWTYEWKGGGLFPCYWKTFH*LPMKIT Trigger: TGTGATCTTCATGGGCAGCAAATGGAAAGTCTTCCA...GTAGCATGGGAACAACCCTCCCCCTTTCCATTCATAAGTCCAAATGTAAATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| 3UTR-3UTR CAA 90 bp | TTTATTTACATTTGGACTTATGAATGGAAAGGGGGAGGGTTGTTCCCATGCTACCAAAAGGAAGCAAAATaGGAACTCATGTGTGCACGT | + |
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Preference number: 3 (lower is better) Translates to: FIYIWTYEWKGGGLFPCYQKEAK*ELMCAR Trigger: ACGTGCACACATGAGTTCCAATTTTGCTTCCTTTTG...GTAGCATGGGAACAACCCTCCCCCTTTCCATTCATAAGTCCAAATGTAAATAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| 3UTR GCA 72 bp | ATTATAACAAAAGGAAGCAAAATTGGAACTCATGTGTaGACGTGTTCAAGGCCTGGAGTACTGATTGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: IITKGSKIGTHV*TCSRPGVLIGR Trigger: TCTTCCAATCAGTACTCCAGGCCTTGAACACGTGCACACATGAGTTCCAATTTTGCTTCCTTTTGTTATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| CDS-3UTR GCA 90 bp | AGCTCTTTTCCCACTTTCCCCAAGGGTCCAGTGACCCTTGTTCCACCACTTTGTAAGAAGGCGGCGCAGTaGAGCTGCGGCCGGTCTGCG | + |
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Preference number: 4 (lower is better) Translates to: SSFPTFPKGPVTLVPPLCKKAAQ*SCGRSA Trigger: CGCAGACCGGCCGCAGCTGCACTGCGCCGCCTTCTT...ACAAAGTGGTGGAACAAGGGTCACTGGACCCTTGGGGAAAGTGGGAAAAGAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| CDS-3UTR GCA 90 bp | CCCATGAAGATCACATACAGTAACTGTGGAGAACTCACTGGGCTAACAGCATGTGCGGCGCAGTGCAGCTaGGGCCGGTCTGCGGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: PMKITYSNCGELTGLTACAAQCS*GRSAVK Trigger: CTTCACCGCAGACCGGCCGCAGCTGCACTGCGCCGC...ACATGCTGTTAGCCCAGTGAGTTCTCCACAGTTACTGTATGTGATCTTCATGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| CDS-3UTR GCA 90 bp | AAGATCACATACAGTAACTGTGGAGAACTCACTGGGCTAACAGCATGTCAATCAGCGGCGCAGTGCAGCTaGGGCCGGTCTGCGGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: KITYSNCGELTGLTACQSAAQCS*GRSAVK Trigger: CTTCACCGCAGACCGGCCGCAGCTGCACTGCGCCGC...TGATTGACATGCTGTTAGCCCAGTGAGTTCTCCACAGTTACTGTATGTGATCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| CDS-3UTR CCA 90 bp | GGAGCATCTGCCCTTGCACATAGCTCTTTTCCCACTTTCCCCAAGGGTCCAGTGCCATTTCCTGGTTCGTaGACCCGGAAGAAGACCATG | + |
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Preference number: 4 (lower is better) Translates to: GASALAHSSFPTFPKGPVPFPGS*TRKKTM Trigger: CATGGTCTTCTTCCGGGTCCACGAACCAGGAAATGG...CACTGGACCCTTGGGGAAAGTGGGAAAAGAGCTATGTGCAAGGGCAGATGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| CDS-3UTR CCA 90 bp | AGCTCTTTTCCCACTTTCCCCAAGGGTCCAGTGACCCTTGTTCCACCACTTTGTCCCGGAAGAAGACCATaGCCACATTCTGGGAAGACC | + |
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Preference number: 4 (lower is better) Translates to: SSFPTFPKGPVTLVPPLCPGRRP*PHSGKT Trigger: GGTCTTCCCAGAATGTGGCCATGGTCTTCTTCCGGG...ACAAAGTGGTGGAACAAGGGTCACTGGACCCTTGGGGAAAGTGGGAAAAGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| CDS-3UTR CCA 90 bp | GGAGCATCTGCCCTTGCACATAGCTCTTTTCCCACTTTCCCCAAGGGTCCAGTGCTAAGGGCATCATCTTaGAGGGGTCCAATCCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: GASALAHSSFPTFPKGPVLRASS*RGPIQF Trigger: GAACTGGATTGGACCCCTCCAAGATGATGCCCTTAG...CACTGGACCCTTGGGGAAAGTGGGAAAAGAGCTATGTGCAAGGGCAGATGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| CDS-3UTR GCA 90 bp | GTGACCCTTGTTCCACCACTTTGTGTTTGCAGCATACCAAAAGCACCAAGCATGGTACGGCTGCTCCTCTaGCAGGTCCCGCTTCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: VTLVPPLCVCSIPKAPSMVRLLL*QVPLQI Trigger: AATCTGAAGCGGGACCTGGCAGAGGAGCAGCCGTAC...CATGCTTGGTGCTTTTGGTATGCTGCAAACACAAAGTGGTGGAACAAGGGTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| CDS-3UTR GCA 90 bp | AAAGCACCAAGCATGTCCACCAACAACCTGTTGTCTACCTTCTGTTTGTTGAAACAGCTGCGGCCGGTCTaGGGTGAAGGTGAACTGGCC | + |
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Preference number: 4 (lower is better) Translates to: KAPSMSTNNLLSTFCLLKQLRPV*GEGELA Trigger: GGCCAGTTCACCTTCACCGCAGACCGGCCGCAGCTG...TTTCAACAAACAGAAGGTAGACAACAGGTTGTTGGTGGACATGCTTGGTGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| CDS-3UTR TCA 90 bp | CACCATTTCTCTGTCTTTGGAGCATCTGCCCTTGCACATAGCTCTTTTCCCACTGCTTCAGATTGGCACTaGAGAGCAGGAGAGGGTCGT | + |
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Preference number: 4 (lower is better) Translates to: HHFSVFGASALAHSSFPTASDWH*RAGEGR Trigger: ACGACCCTCTCCTGCTCTTCAGTGCCAATCTGAAGC...AGTGGGAAAAGAGCTATGTGCAAGGGCAGATGCTCCAAAGACAGAGAAATGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| CDS-3UTR GCA 90 bp | TTTATTTACATTTGGACTTATGAATGGAAAGGGGGAGGGTTGTTCCCATGCTACCAGCTGCGGCCGGTCTaGGGTGAAGGTGAACTGGCC | + |
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Preference number: 4 (lower is better) Translates to: FIYIWTYEWKGGGLFPCYQLRPV*GEGELA Trigger: GGCCAGTTCACCTTCACCGCAGACCGGCCGCAGCTG...GTAGCATGGGAACAACCCTCCCCCTTTCCATTCATAAGTCCAAATGTAAATAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| CDS-3UTR GCA 90 bp | TTCTGCATACGTTTATTTACATTTGGACTTATGAATGGAAAGGGGGAGGGTTGTAAGAAGGCGGCGCAGTaGAGCTGCGGCCGGTCTGCG | + |
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Preference number: 4 (lower is better) Translates to: FCIRLFTFGLMNGKGEGCKKAAQ*SCGRSA Trigger: CGCAGACCGGCCGCAGCTGCACTGCGCCGCCTTCTT...ACAACCCTCCCCCTTTCCATTCATAAGTCCAAATGTAAATAAACGTATGCAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| CDS-3UTR CCA 90 bp | AGTGACCCTTGTTCCACCACTTTGTGTTTGCAGCATACCAAAAGCACCAAGCATAGGAAATCCCCGCCTTaGCAGTCGATGGAGACCAGG | + |
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Preference number: 4 (lower is better) Translates to: SDPCSTTLCLQHTKSTKHRKSPP*QSMETR Trigger: CCTGGTCTCCATCGACTGCCAAGGCGGGGATTTCCT...ATGCTTGGTGCTTTTGGTATGCTGCAAACACAAAGTGGTGGAACAAGGGTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| CDS-3UTR CCA 90 bp | GTGACCCTTGTTCCACCACTTTGTGTTTGCAGCATACCAAAAGCACCAAGCATGCCCGGAAGAAGACCATaGCCACATTCTGGGAAGACC | + |
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Preference number: 4 (lower is better) Translates to: VTLVPPLCVCSIPKAPSMPGRRP*PHSGKT Trigger: GGTCTTCCCAGAATGTGGCCATGGTCTTCTTCCGGG...CATGCTTGGTGCTTTTGGTATGCTGCAAACACAAAGTGGTGGAACAAGGGTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| 3UTR CAA 72 bp | AGTGCCACCATTTCTCTGTCTTTGGAGCATCTGCCCTaGCACATAGCTCTTTTCCCACTTTCCCCAAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: SATISLSLEHLP*HIALFPLSPRV Trigger: GACCCTTGGGGAAAGTGGGAAAAGAGCTATGTGCAAGGGCAGATGCTCCAAAGACAGAGAAATGGTGGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| CDS-3UTR TCA 90 bp | TTCAAGGCCTGGAGTACTGATTGGAAGACTTTCCATTTGCTGCCCATGAAGATCGCTTCAGATTGGCACTaGAGAGCAGGAGAGGGTCGT | + |
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Preference number: 4 (lower is better) Translates to: FKAWSTDWKTFHLLPMKIASDWH*RAGEGR Trigger: ACGACCCTCTCCTGCTCTTCAGTGCCAATCTGAAGC...GATCTTCATGGGCAGCAAATGGAAAGTCTTCCAATCAGTACTCCAGGCCTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| CDS-3UTR GCA 90 bp | TTCAAGGCCTGGAGTACTGATTGGAAGACTTTCCATTTGCTGCCCATGAAGATCTCCCACTGGAGACCATaGGTACCACAGCATTGTCGC | + |
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Preference number: 4 (lower is better) Translates to: FKAWSTDWKTFHLLPMKISHWRP*VPQHCR Trigger: GCGACAATGCTGTGGTACGCATGGTCTCCAGTGGGA...GATCTTCATGGGCAGCAAATGGAAAGTCTTCCAATCAGTACTCCAGGCCTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| 3UTR CAA 72 bp | CAAGGGTCCAGTGACCCTTGTTCCACCACTTTGTGTTaGCAGCATACCAAAAGCACCAAGCATGTCCACCAA | + |
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Preference number: 4 (lower is better) Translates to: QGSSDPCSTTLC*QHTKSTKHVHQ Trigger: TTGGTGGACATGCTTGGTGCTTTTGGTATGCTGCAAACACAAAGTGGTGGAACAAGGGTCACTGGACCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| 3UTR CAA 72 bp | TTTCCCCAAGGGTCCAGTGACCCTTGTTCCACCACTTaGTGTTTGCAGCATACCAAAAGCACCAAGCATGTC | + |
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Preference number: 4 (lower is better) Translates to: FPQGSSDPCSTT*CLQHTKSTKHV Trigger: GACATGCTTGGTGCTTTTGGTATGCTGCAAACACAAAGTGGTGGAACAAGGGTCACTGGACCCTTGGGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| CDS-3UTR CCA 90 bp | AGCTCTTTTCCCACTTTCCCCAAGGGTCCAGTGACCCTTGTTCCACCACTTTGTAGACAAACAGTATTCTaGGATGCTGTTTCCGGTCGA | + |
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Preference number: 4 (lower is better) Translates to: SSFPTFPKGPVTLVPPLCRQTVF*DAVSGR Trigger: TCGACCGGAAACAGCATCCCAGAATACTGTTTGTCT...ACAAAGTGGTGGAACAAGGGTCACTGGACCCTTGGGGAAAGTGGGAAAAGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| CDS-3UTR TCA 90 bp | ACATTTGGACTTATGAATGGAAAGGGGGAGGGTTGTTCCCATGCTACAAAGTGTCTTCCACTCGGAGTCTaGGAGATGACATTGCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: TFGLMNGKGEGCSHATKCLPLGV*EMTLQG Trigger: CCCTTGCAATGTCATCTCTCAGACTCCGAGTGGAAG...ACACTTTGTAGCATGGGAACAACCCTCCCCCTTTCCATTCATAAGTCCAAATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| CDS-3UTR TCA 90 bp | CCCATGAAGATCACATACAGTAACTGTGGAGAACTCACTGGGCTAACAGCATGTGCAGGTTTCTTTAACTaGAGGCCATGCAAGTGTCCG | + |
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Preference number: 4 (lower is better) Translates to: PMKITYSNCGELTGLTACAGFFN*RPCKCP Trigger: CGGACACTTGCATGGCCTTCAGTTAAAGAAACCTGC...ACATGCTGTTAGCCCAGTGAGTTCTCCACAGTTACTGTATGTGATCTTCATGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| CDS-3UTR TCA 90 bp | CACCATTTCTCTGTCTTTGGAGCATCTGCCCTTGCACATAGCTCTTTTCCCACTTCGAATGGCTCCAGCTaGCGATACTCAAATGTCACA | + |
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Preference number: 4 (lower is better) Translates to: HHFSVFGASALAHSSFPTSNGSS*RYSNVT Trigger: TGTGACATTTGAGTATCGTCAGCTGGAGCCATTCGA...AGTGGGAAAAGAGCTATGTGCAAGGGCAGATGCTCCAAAGACAGAGAAATGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| CDS-3UTR GCA 90 bp | AAGATCACATACAGTAACTGTGGAGAACTCACTGGGCTAACAGCATGTCAATCATCCCACTGGAGACCATaGGTACCACAGCATTGTCGC | + |
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Preference number: 4 (lower is better) Translates to: KITYSNCGELTGLTACQSSHWRP*VPQHCR Trigger: GCGACAATGCTGTGGTACGCATGGTCTCCAGTGGGA...TGATTGACATGCTGTTAGCCCAGTGAGTTCTCCACAGTTACTGTATGTGATCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| CDS-3UTR CCA 90 bp | AGCAAAATTGGAACTCATGTGTGCACGTGTTCAAGGCCTGGAGTACTGATTGGACGTGAATCCATTTCCTaGTTCGTGGACCCGGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: SKIGTHVCTCSRPGVLIGRESIS*FVDPEE Trigger: TTCTTCCGGGTCCACGAACCAGGAAATGGATTCACG...TCCAATCAGTACTCCAGGCCTTGAACACGTGCACACATGAGTTCCAATTTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| CDS-3UTR CCA 90 bp | TTCAAGGCCTGGAGTACTGATTGGAAGACTTTCCATTTGCTGCCCATGAAGATCCGTGAATCCATTTCCTaGTTCGTGGACCCGGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: FKAWSTDWKTFHLLPMKIRESIS*FVDPEE Trigger: TTCTTCCGGGTCCACGAACCAGGAAATGGATTCACG...GATCTTCATGGGCAGCAAATGGAAAGTCTTCCAATCAGTACTCCAGGCCTTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| CDS-3UTR CCA 90 bp | AGCTCTTTTCCCACTTTCCCCAAGGGTCCAGTGACCCTTGTTCCACCACTTTGTTGCAAGGGAAGAGGTTaGGATCTGTCTTTATGGTTA | + |
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Preference number: 4 (lower is better) Translates to: SSFPTFPKGPVTLVPPLCCKGRG*DLSLWL Trigger: TAACCATAAAGACAGATCCCAACCTCTTCCCTTGCA...ACAAAGTGGTGGAACAAGGGTCACTGGACCCTTGGGGAAAGTGGGAAAAGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| CDS-3UTR CCA 90 bp | TTCTGCATACGTTTATTTACATTTGGACTTATGAATGGAAAGGGGGAGGGTTGTAGGAAATCCCCGCCTTaGCAGTCGATGGAGACCAGG | + |
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Preference number: 4 (lower is better) Translates to: FCIRLFTFGLMNGKGEGCRKSPP*QSMETR Trigger: CCTGGTCTCCATCGACTGCCAAGGCGGGGATTTCCT...ACAACCCTCCCCCTTTCCATTCATAAGTCCAAATGTAAATAAACGTATGCAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| CDS-3UTR CCA 90 bp | ACATTTGGACTTATGAATGGAAAGGGGGAGGGTTGTTCCCATGCTACAAAGTGTCTAAGGGCATCATCTTaGAGGGGTCCAATCCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: TFGLMNGKGEGCSHATKCLRASS*RGPIQF Trigger: GAACTGGATTGGACCCCTCCAAGATGATGCCCTTAG...ACACTTTGTAGCATGGGAACAACCCTCCCCCTTTCCATTCATAAGTCCAAATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| 3UTR CAA 72 bp | TGTCATGAAACTGTGAGTGCCACCATTTCTCTGTCTTaGGAGCATCTGCCCTTGCACATAGCTCTTTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: CHETVSATISLS*EHLPLHIALFP Trigger: TGGGAAAAGAGCTATGTGCAAGGGCAGATGCTCCAAAGACAGAGAAATGGTGGCACTCACAGTTTCATGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| CDS-3UTR TCA 90 bp | ACATTTGGACTTATGAATGGAAAGGGGGAGGGTTGTTCCCATGCTACAAAGTGTTCGAATGGCTCCAGCTaGCGATACTCAAATGTCACA | + |
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Preference number: 4 (lower is better) Translates to: TFGLMNGKGEGCSHATKCSNGSS*RYSNVT Trigger: TGTGACATTTGAGTATCGTCAGCTGGAGCCATTCGA...ACACTTTGTAGCATGGGAACAACCCTCCCCCTTTCCATTCATAAGTCCAAATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| CDS-3UTR GCA 90 bp | CACCATTTCTCTGTCTTTGGAGCATCTGCCCTTGCACATAGCTCTTTTCCCACTAAGCTGCAGTTTTGGTaGTGGTATGGAACCACTAAA | + |
|
Preference number: 4 (lower is better) Translates to: HHFSVFGASALAHSSFPTKLQFW*WYGTTK Trigger: TTTAGTGGTTCCATACCAGCACCAAAACTGCAGCTT...AGTGGGAAAAGAGCTATGTGCAAGGGCAGATGCTCCAAAGACAGAGAAATGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS-3UTR GCA 90 bp | GTGACCCTTGTTCCACCACTTTGTGTTTGCAGCATACCAAAAGCACCAAGCATGAAGCTGCAGTTTTGGTaGTGGTATGGAACCACTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VTLVPPLCVCSIPKAPSMKLQFW*WYGTTK Trigger: TTTAGTGGTTCCATACCAGCACCAAAACTGCAGCTT...CATGCTTGGTGCTTTTGGTATGCTGCAAACACAAAGTGGTGGAACAAGGGTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS-3UTR CCA 90 bp | CCCATGAAGATCACATACAGTAACTGTGGAGAACTCACTGGGCTAACAGCATGTTGCAAGGGAAGAGGTTaGGATCTGTCTTTATGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: PMKITYSNCGELTGLTACCKGRG*DLSLWL Trigger: TAACCATAAAGACAGATCCCAACCTCTTCCCTTGCA...ACATGCTGTTAGCCCAGTGAGTTCTCCACAGTTACTGTATGTGATCTTCATGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS-3UTR TCA 90 bp | CCCATGAAGATCACATACAGTAACTGTGGAGAACTCACTGGGCTAACAGCATGTTCTTTATGGTTATCGTaGATCCATTTCCTGGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PMKITYSNCGELTGLTACSLWLS*IHFLVR Trigger: ACGAACCAGGAAATGGATTCACGATAACCATAAAGA...ACATGCTGTTAGCCCAGTGAGTTCTCCACAGTTACTGTATGTGATCTTCATGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS-3UTR GCA 90 bp | CACCATTTCTCTGTCTTTGGAGCATCTGCCCTTGCACATAGCTCTTTTCCCACTATCAGAGATTTTGATTaGCACTGGATAGATGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: HHFSVFGASALAHSSFPTIRDFD*HWIDDG Trigger: TCCATCATCTATCCAGTGGCAATCAAAATCTCTGAT...AGTGGGAAAAGAGCTATGTGCAAGGGCAGATGCTCCAAAGACAGAGAAATGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS-3UTR TCA 90 bp | CTAACATTCTGCATACGTTTATTTACATTTGGACTTATGAATGGAAAGGGGGAGGCAGGTTTCTTTAACTaGAGGCCATGCAAGTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LTFCIRLFTFGLMNGKGEAGFFN*RPCKCP Trigger: CGGACACTTGCATGGCCTTCAGTTAAAGAAACCTGC...CTCCCCCTTTCCATTCATAAGTCCAAATGTAAATAAACGTATGCAGAATGTTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221025.2 |
||
| CDS-3UTR CCA 90 bp | TTTATTTACATTTGGACTTATGAATGGAAAGGGGGAGGGTTGTTCCCATGCTACAGACAAACAGTATTCTaGGATGCTGTTTCCGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: FIYIWTYEWKGGGLFPCYRQTVF*DAVSGR Trigger: TCGACCGGAAACAGCATCCCAGAATACTGTTTGTCT...GTAGCATGGGAACAACCCTCCCCCTTTCCATTCATAAGTCCAAATGTAAATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS-3UTR TCA 90 bp | ACTGATTGGAAGACTTTCCATTTGCTGCCCATGAAGATCACATACAGTAACTGTTCTTTATGGTTATCGTaGATCCATTTCCTGGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: TDWKTFHLLPMKITYSNCSLWLS*IHFLVR Trigger: ACGAACCAGGAAATGGATTCACGATAACCATAAAGA...ACAGTTACTGTATGTGATCTTCATGGGCAGCAAATGGAAAGTCTTCCAATCAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS-3UTR GCA 90 bp | AAGATCACATACAGTAACTGTGGAGAACTCACTGGGCTAACAGCATGTCAATCAATCAGAGATTTTGATTaGCACTGGATAGATGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: KITYSNCGELTGLTACQSIRDFD*HWIDDG Trigger: TCCATCATCTATCCAGTGGCAATCAAAATCTCTGAT...TGATTGACATGCTGTTAGCCCAGTGAGTTCTCCACAGTTACTGTATGTGATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| 3UTR CAA 72 bp | ATACCAAAAGCACCAAGCATGTCCACCAACAACCTGTaGTCTACCTTCTGTTTGTTGAAACATTATAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: IPKAPSMSTNNL*STFCLLKHYNK Trigger: TTTGTTATAATGTTTCAACAAACAGAAGGTAGACAACAGGTTGTTGGTGGACATGCTTGGTGCTTTTGGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS GCA 90 bp | CAGCATGTCCAGGCACCGCAGAGCCCGTCGGTACGGCTGCTCCTCTaGCAGGTCCCGCTTCAGATTGGCACTGAAGAGCAGGAGAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QHVQAPQSPSVRLLL*QVPLQIGTEEQERV Trigger: GACCCTCTCCTGCTCTTCAGTGCCAATCTGAAGCGGGACCTGGCAGAGGAGCAGCCGTACCGACGGGCTCTGCGGTGCCTGGACATGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS GCA 90 bp | ATGAATTCCTCGGGTTCGCCGATGAAGAAGGCGGCGCAGTGCAGCTaGGGCCGGTCTGCGGTGAAGGTGAACTGGCCAGGGAGGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: MNSSGSPMKKAAQCS*GRSAVKVNWPGRLS Trigger: GCTGAGCCTCCCTGGCCAGTTCACCTTCACCGCAGACCGGCCGCAGCTGCACTGCGCCGCCTTCTTCATCGGCGAACCCGAGGAATTCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS GCA 90 bp | ATGGTGATGAATTCCTCGGGTTCGCCGATGAAGAAGGCGGCGCAGTaGAGCTGCGGCCGGTCTGCGGTGAAGGTGAACTGGCCAGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: MVMNSSGSPMKKAAQ*SCGRSAVKVNWPGR Trigger: CCTCCCTGGCCAGTTCACCTTCACCGCAGACCGGCCGCAGCTGCACTGCGCCGCCTTCTTCATCGGCGAACCCGAGGAATTCATCACCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS TCA 90 bp | GTCGGTACGGCTGCTCCTCTGCCAGGTCCCGCTTCAGATTGGCACTaGAGAGCAGGAGAGGGTCGTAGACCGCGGCTTCTTGCACCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: VGTAAPLPGPASDWH*RAGEGRRPRLLAPL Trigger: TAGAGGTGCAAGAAGCCGCGGTCTACGACCCTCTCCTGCTCTTCAGTGCCAATCTGAAGCGGGACCTGGCAGAGGAGCAGCCGTACCGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221025.2 |
||
| CDS-3UTR CAA 90 bp | GGAGCATCTGCCCTTGCACATAGCTCTTTTCCCACTTTCCCCAAGGGTCCAGTGGGAGAAGCTGCAGTTTaGGTGCTGGTATGGAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: GASALAHSSFPTFPKGPVGEAAV*VLVWNH Trigger: GTGGTTCCATACCAGCACCAAAACTGCAGCTTCTCC...CACTGGACCCTTGGGGAAAGTGGGAAAAGAGCTATGTGCAAGGGCAGATGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS-3UTR CAA 90 bp | GGAGCATCTGCCCTTGCACATAGCTCTTTTCCCACTTTCCCCAAGGGTCCAGTGGCTAAGGGCATCATCTaGGAGGGGTCCAATCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GASALAHSSFPTFPKGPVAKGII*EGSNPV Trigger: AACTGGATTGGACCCCTCCAAGATGATGCCCTTAGC...CACTGGACCCTTGGGGAAAGTGGGAAAAGAGCTATGTGCAAGGGCAGATGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS CCA 90 bp | CCATTTCCTGGTTCGTGGACCCGGAAGAAGACCATGGCCACATTCTaGGAAGACCTGATGCTCCTTCTGGTAAGACCACTCTCACAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PFPGSWTRKKTMATF*EDLMLLLVRPLSQK Trigger: TTTCTGTGAGAGTGGTCTTACCAGAAGGAGCATCAGGTCTTCCCAGAATGTGGCCATGGTCTTCTTCCGGGTCCACGAACCAGGAAATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS TCA 90 bp | GGGATGCTGTTTCCGGTCGAGGTTTCTAGCTCGAATGGCTCCAGCTaGCGATACTCAAATGTCACACGGTTAATGTGTTTCCCACTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GMLFPVEVSSSNGSS*RYSNVTRLMCFPLE Trigger: CTCCAGTGGGAAACACATTAACCGTGTGACATTTGAGTATCGTCAGCTGGAGCCATTCGAGCTAGAAACCTCGACCGGAAACAGCATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS-3UTR CAA 90 bp | TTCAAGGCCTGGAGTACTGATTGGAAGACTTTCCATTTGCTGCCCATGAAGATCGTAGACCGCGGCTTCTaGCACCTGGAGAGGAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: FKAWSTDWKTFHLLPMKIVDRGF*HLERKV Trigger: CACTTTCCTCTCCAGGTGCAAGAAGCCGCGGTCTAC...GATCTTCATGGGCAGCAAATGGAAAGTCTTCCAATCAGTACTCCAGGCCTTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045583.9 |
||
| CDS-3UTR CAA 90 bp | CACCATTTCTCTGTCTTTGGAGCATCTGCCCTTGCACATAGCTCTTTTCCCACTAGGTCCCGCTTCAGATaGGCACTGAAGAGCAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: HHFSVFGASALAHSSFPTRSRFR*ALKSRR Trigger: TCTCCTGCTCTTCAGTGCCAATCTGAAGCGGGACCT...AGTGGGAAAAGAGCTATGTGCAAGGGCAGATGCTCCAAAGACAGAGAAATGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS-3UTR CAA 90 bp | ACATTTGGACTTATGAATGGAAAGGGGGAGGGTTGTTCCCATGCTACAAAGTGTCAGGAAATCCCCGCCTaGGCAGTCGATGGAGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: TFGLMNGKGEGCSHATKCQEIPA*AVDGDQ Trigger: CTGGTCTCCATCGACTGCCAAGGCGGGGATTTCCTG...ACACTTTGTAGCATGGGAACAACCCTCCCCCTTTCCATTCATAAGTCCAAATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS-3UTR CAA 90 bp | AGTGACCCTTGTTCCACCACTTTGTGTTTGCAGCATACCAAAAGCACCAAGCATAGGTCCCGCTTCAGATaGGCACTGAAGAGCAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SDPCSTTLCLQHTKSTKHRSRFR*ALKSRR Trigger: TCTCCTGCTCTTCAGTGCCAATCTGAAGCGGGACCT...ATGCTTGGTGCTTTTGGTATGCTGCAAACACAAAGTGGTGGAACAAGGGTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS-3UTR CAA 90 bp | TTATTCTGTCATGAAACTGTGAGTGCCACCATTTCTCTGTCTTTGGAGCATCTGCAGGAAATCCCCGCCTaGGCAGTCGATGGAGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: LFCHETVSATISLSLEHLQEIPA*AVDGDQ Trigger: CTGGTCTCCATCGACTGCCAAGGCGGGGATTTCCTG...CAGATGCTCCAAAGACAGAGAAATGGTGGCACTCACAGTTTCATGACAGAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS-3UTR CAA 90 bp | GTGACCCTTGTTCCACCACTTTGTGTTTGCAGCATACCAAAAGCACCAAGCATGGGAGAAGCTGCAGTTTaGGTGCTGGTATGGAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: VTLVPPLCVCSIPKAPSMGEAAV*VLVWNH Trigger: GTGGTTCCATACCAGCACCAAAACTGCAGCTTCTCC...CATGCTTGGTGCTTTTGGTATGCTGCAAACACAAAGTGGTGGAACAAGGGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS CCA 90 bp | TTGGGATCTGTCTTTATGGTTATCGTGAATCCATTTCCTGGTTCGTaGACCCGGAAGAAGACCATGGCCACATTCTGGGAAGACCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LGSVFMVIVNPFPGS*TRKKTMATFWEDLM Trigger: CATCAGGTCTTCCCAGAATGTGGCCATGGTCTTCTTCCGGGTCCACGAACCAGGAAATGGATTCACGATAACCATAAAGACAGATCCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS CCA 90 bp | GAAGAGGTTGGGATCTGTCTTTATGGTTATCGTGAATCCATTTCCTaGTTCGTGGACCCGGAAGAAGACCATGGCCACATTCTGGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: EEVGICLYGYRESIS*FVDPEEDHGHILGR Trigger: TCTTCCCAGAATGTGGCCATGGTCTTCTTCCGGGTCCACGAACCAGGAAATGGATTCACGATAACCATAAAGACAGATCCCAACCTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS GCA 90 bp | CTGAAGGCCATGCAAGTGTCCGAGGGTAAGATCAGAGATTTTGATTaGCACTGGATAGATGATGGAGAAGCTGCAGTTTTGGTGCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LKAMQVSEGKIRDFD*HWIDDGEAAVLVLV Trigger: TACCAGCACCAAAACTGCAGCTTCTCCATCATCTATCCAGTGGCAATCAAAATCTCTGATCTTACCCTCGGACACTTGCATGGCCTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS CCA 90 bp | GCCATGCAAGTGTCCGAGGGTAAGATCAGAGATTTTGATTGCCACTaGATAGATGATGGAGAAGCTGCAGTTTTGGTGCTGGTATGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: AMQVSEGKIRDFDCH*IDDGEAAVLVLVWN Trigger: GTTCCATACCAGCACCAAAACTGCAGCTTCTCCATCATCTATCCAGTGGCAATCAAAATCTCTGATCTTACCCTCGGACACTTGCATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS TCA 90 bp | TGGTGCTGGTATGGAACCACTAAAGTAAACCTTCCACTCGGAGTCTaGGAGATGACATTGCAAGGGAAGAGGTTGGGATCTGTCTTTATG | + |
|
Preference number: 5 (lower is better) Translates to: WCWYGTTKVNLPLGV*EMTLQGKRLGSVFM Trigger: CATAAAGACAGATCCCAACCTCTTCCCTTGCAATGTCATCTCTCAGACTCCGAGTGGAAGGTTTACTTTAGTGGTTCCATACCAGCACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS-3UTR CAA 90 bp | TTCTGCATACGTTTATTTACATTTGGACTTATGAATGGAAAGGGGGAGGGTTGTGCTAAGGGCATCATCTaGGAGGGGTCCAATCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: FCIRLFTFGLMNGKGEGCAKGII*EGSNPV Trigger: AACTGGATTGGACCCCTCCAAGATGATGCCCTTAGC...ACAACCCTCCCCCTTTCCATTCATAAGTCCAAATGTAAATAAACGTATGCAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS-3UTR CAA 90 bp | TTTATTTACATTTGGACTTATGAATGGAAAGGGGGAGGGTTGTTCCCATGCTACTTGCAAGGGAAGAGGTaGGGATCTGTCTTTATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: FIYIWTYEWKGGGLFPCYLQGKR*GSVFMV Trigger: AACCATAAAGACAGATCCCAACCTCTTCCCTTGCAA...GTAGCATGGGAACAACCCTCCCCCTTTCCATTCATAAGTCCAAATGTAAATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS-3UTR CAA 90 bp | TTCTGCATACGTTTATTTACATTTGGACTTATGAATGGAAAGGGGGAGGGTTGTTTGCAAGGGAAGAGGTaGGGATCTGTCTTTATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: FCIRLFTFGLMNGKGEGCLQGKR*GSVFMV Trigger: AACCATAAAGACAGATCCCAACCTCTTCCCTTGCAA...ACAACCCTCCCCCTTTCCATTCATAAGTCCAAATGTAAATAAACGTATGCAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS GCA 72 bp | TCGGGTTCGCCGATGAAGAAGGCGGCGCAGTGCAGCTaGGGCCGGTCTGCGGTGAAGGTGAACTGGCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SGSPMKKAAQCS*GRSAVKVNWPG Trigger: CCCTGGCCAGTTCACCTTCACCGCAGACCGGCCGCAGCTGCACTGCGCCGCCTTCTTCATCGGCGAACCCGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS CCA 72 bp | CAGTGCAGCTGCGGCCGGTCTGCGGTGAAGGTGAACTaGCCAGGGAGGCTCAGCATGTCCAGGCACCGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: QCSCGRSAVKVN*PGRLSMSRHRR Trigger: TCTGCGGTGCCTGGACATGCTGAGCCTCCCTGGCCAGTTCACCTTCACCGCAGACCGGCCGCAGCTGCACTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS GCA 72 bp | CAGGCACCGCAGAGCCCGTCGGTACGGCTGCTCCTCTaGCAGGTCCCGCTTCAGATTGGCACTGAAGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QAPQSPSVRLLL*QVPLQIGTEEQ Trigger: CTGCTCTTCAGTGCCAATCTGAAGCGGGACCTGGCAGAGGAGCAGCCGTACCGACGGGCTCTGCGGTGCCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS GCA 72 bp | AGCATGTCCAGGCACCGCAGAGCCCGTCGGTACGGCTaGTCCTCTGCCAGGTCCCGCTTCAGATTGGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: SMSRHRRARRYG*SSARSRFRLAL Trigger: CAGTGCCAATCTGAAGCGGGACCTGGCAGAGGAGCAGCCGTACCGACGGGCTCTGCGGTGCCTGGACATGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS GCA 72 bp | GATGAAGAAGGCGGCGCAGTGCAGCTGCGGCCGGTCTaGGGTGAAGGTGAACTGGCCAGGGAGGCTCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: DEEGGAVQLRPV*GEGELAREAQH Trigger: ATGCTGAGCCTCCCTGGCCAGTTCACCTTCACCGCAGACCGGCCGCAGCTGCACTGCGCCGCCTTCTTCATC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS GCA 72 bp | AATTCCTCGGGTTCGCCGATGAAGAAGGCGGCGCAGTaGAGCTGCGGCCGGTCTGCGGTGAAGGTGAACTGG | + |
|
Preference number: 6 (lower is better) Translates to: NSSGSPMKKAAQ*SCGRSAVKVNW Trigger: CCAGTTCACCTTCACCGCAGACCGGCCGCAGCTGCACTGCGCCGCCTTCTTCATCGGCGAACCCGAGGAATT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS TCA 72 bp | GCTGCTCCTCTGCCAGGTCCCGCTTCAGATTGGCACTaGAGAGCAGGAGAGGGTCGTAGACCGCGGCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: AAPLPGPASDWH*RAGEGRRPRLL Trigger: AAGAAGCCGCGGTCTACGACCCTCTCCTGCTCTTCAGTGCCAATCTGAAGCGGGACCTGGCAGAGGAGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS CCA 72 bp | GAAAGGGGTAACACAGGTCTGCTAAGGGCATCATCTTaGAGGGGTCCAATCCAGTTCCTCCCAGCAGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: ERGNTGLLRASS*RGPIQFLPAAP Trigger: TGGAGCTGCTGGGAGGAACTGGATTGGACCCCTCCAAGATGATGCCCTTAGCAGACCTGTGTTACCCCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS CAA 72 bp | ATGTGTTTCCCACTGGAGACCATGCGTACCACAGCATaGTCGCAGCTAATTTTCATCTGGGCAGGGCCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: MCFPLETMRTTA*SQLIFIWAGPR Trigger: TCTCGGCCCTGCCCAGATGAAAATTAGCTGCGACAATGCTGTGGTACGCATGGTCTCCAGTGGGAAACACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS CAA 72 bp | GATCCAACCATCAAATACCTTCAGGAAATCCCCGCCTaGGCAGTCGATGGAGACCAGGTCATAGTGGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: DPTIKYLQEIPA*AVDGDQVIVDG Trigger: ACCATCCACTATGACCTGGTCTCCATCGACTGCCAAGGCGGGGATTTCCTGAAGGTATTTGATGGTTGGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS CCA 72 bp | GTCTTTATGGTTATCGTGAATCCATTTCCTGGTTCGTaGACCCGGAAGAAGACCATGGCCACATTCTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: VFMVIVNPFPGS*TRKKTMATFWE Trigger: TTCCCAGAATGTGGCCATGGTCTTCTTCCGGGTCCACGAACCAGGAAATGGATTCACGATAACCATAAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS CCA 72 bp | GGGATCTGTCTTTATGGTTATCGTGAATCCATTTCCTaGTTCGTGGACCCGGAAGAAGACCATGGCCACATT | + |
|
Preference number: 6 (lower is better) Translates to: GICLYGYRESIS*FVDPEEDHGHI Trigger: AATGTGGCCATGGTCTTCTTCCGGGTCCACGAACCAGGAAATGGATTCACGATAACCATAAAGACAGATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
||
| CDS TCA 72 bp | AAGGGAAGAGGTTGGGATCTGTCTTTATGGTTATCGTaGATCCATTTCCTGGTTCGTGGACCCGGAAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: KGRGWDLSLWLS*IHFLVRGPGRR Trigger: TCTTCTTCCGGGTCCACGAACCAGGAAATGGATTCACGATAACCATAAAGACAGATCCCAACCTCTTCCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| CDS TCA 72 bp | TTTCCGGTCGAGGTTTCTAGCTCGAATGGCTCCAGCTaGCGATACTCAAATGTCACACGGTTAATGTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: FPVEVSSSNGSS*RYSNVTRLMCF Trigger: GAAACACATTAACCGTGTGACATTTGAGTATCGTCAGCTGGAGCCATTCGAGCTAGAAACCTCGACCGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| CDS TCA 72 bp | TATGGAACCACTAAAGTAAACCTTCCACTCGGAGTCTaGGAGATGACATTGCAAGGGAAGAGGTTGGGATCT | + |
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Preference number: 6 (lower is better) Translates to: YGTTKVNLPLGV*EMTLQGKRLGS Trigger: AGATCCCAACCTCTTCCCTTGCAATGTCATCTCTCAGACTCCGAGTGGAAGGTTTACTTTAGTGGTTCCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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| CDS GCA 72 bp | ATGCAAGTGTCCGAGGGTAAGATCAGAGATTTTGATTaGCACTGGATAGATGATGGAGAAGCTGCAGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: MQVSEGKIRDFD*HWIDDGEAAVL Trigger: CAAAACTGCAGCTTCTCCATCATCTATCCAGTGGCAATCAAAATCTCTGATCTTACCCTCGGACACTTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045583.9 ENSMUST00000221025.2 |
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