RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CREM (Mus musculus)

Ensembl gene IDs: ENSMUSG00000063889

Ensembl transcript IDs: ENSMUST00000025069.11, ENSMUST00000049942.13, ENSMUST00000082141.12, ENSMUST00000122958.8, ENSMUST00000124747.8, ENSMUST00000126578.8, ENSMUST00000127601.8, ENSMUST00000129435.8, ENSMUST00000130455.8, ENSMUST00000130599.8, ENSMUST00000131899.8, ENSMUST00000134027.8, ENSMUST00000136961.8, ENSMUST00000137568.8, ENSMUST00000139537.2, ENSMUST00000140332.8, ENSMUST00000142690.2, ENSMUST00000144496.8, ENSMUST00000146265.8, ENSMUST00000147138.8, ENSMUST00000148305.2, ENSMUST00000149803.8, ENSMUST00000150235.8, ENSMUST00000151084.8, ENSMUST00000151311.8, ENSMUST00000152108.8, ENSMUST00000152900.8, ENSMUST00000154135.8, ENSMUST00000154470.8, ENSMUST00000154705.8, ENSMUST00000154715.8, ENSMUST00000156234.8, ENSMUST00000165086.8

Found 602 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATCAGCCTCAGCTCCCGCTTGCGAGTTGCTTCTTCTGCTAGTTGCTaGGGACTGTGCAGGCTTCCTGGTGAGGCAGCCATCACCACACCT +
Preference number: 1 (lower is better)
Translates to: ISLSSRLRVASSASC*GLCRLPGEAAITTP
Trigger: AGGTGTGGTGATGGCTGCCTCACCAGGAAGCCTGCACAGTCCCCAGCAACTAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134027.8
3UTR GCA 90 bp AGCTCCCGCTTGCGAGTTGCTTCTTCTGCTAGTTGCTGGGGACTGTaGAGGCTTCCTGGTGAGGCAGCCATCACCACACCTTGTGGCAAA +
Preference number: 1 (lower is better)
Translates to: SSRLRVASSASCWGL*RLPGEAAITTPCGK
Trigger: TTTGCCACAAGGTGTGGTGATGGCTGCCTCACCAGGAAGCCTGCACAGTCCCCAGCAACTAGCAGAAGAAGCAACTCGCAAGCGGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134027.8
3UTR GCA 90 bp TTCATCAGCCTCAGCTCCCGCTTGCGAGTTGCTTCTTCTGCTAGTTaGTGGGGACTGTGCAGGCTTCCTGGTGAGGCAGCCATCACCACA +
Preference number: 1 (lower is better)
Translates to: FISLSSRLRVASSAS*WGLCRLPGEAAITT
Trigger: TGTGGTGATGGCTGCCTCACCAGGAAGCCTGCACAGTCCCCAGCAACTAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCTGATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134027.8
3UTR TCA 90 bp TCCCTTTCAACTGAACATGTAGCATGCCAGGCAAGTGCTCCACACTaGACTCTGCTCCTAGAGCCCTGCAGTTGTCCTCTAATGAAATGG +
Preference number: 1 (lower is better)
Translates to: SLSTEHVACQASAPH*TLLLEPCSCPLMKW
Trigger: CCATTTCATTAGAGGACAACTGCAGGGCTCTAGGAGCAGAGTTCAGTGTGGAGCACTTGCCTGGCATGCTACATGTTCAGTTGAAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
3UTR CCA 90 bp ACCTGTGGCAGTGTATTGCCCCGTGCTAGTCTGATATATGCTAGTTaGTACTGCCATGGTAGCAATGTTAGGTGGTGTCCCTTCTTCCTC +
Preference number: 1 (lower is better)
Translates to: TCGSVLPRASLIYAS*YCHGSNVRWCPFFL
Trigger: GAGGAAGAAGGGACACCACCTAACATTGCTACCATGGCAGTACCAACTAGCATATATCAGACTAGCACGGGGCAATACACTGCCACAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134027.8
3UTR TCA 90 bp AGATGGCTCCGTCATTTAGAACATGTGCTGCTCTTGCAGAATATCTaGGTTCAGTTCCCAACACCCATGTTGGAAGGCTCACAACTATCT +
Preference number: 1 (lower is better)
Translates to: RWLRHLEHVLLLQNI*VQFPTPMLEGSQLS
Trigger: AGATAGTTGTGAGCCTTCCAACATGGGTGTTGGGAACTGAACTCAGATATTCTGCAAGAGCAGCACATGTTCTAAATGACGGAGCCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000151311.8
3UTR TCA 90 bp CTGCAGTTGTCCTCTAATGAAATGGCCCAGTATTTGCAAGGCTGCTaGTCCAGTGTAGCAATAAATTCATACTTGTGGAACTCATTCCAG +
Preference number: 1 (lower is better)
Translates to: LQLSSNEMAQYLQGC*SSVAINSYLWNSFQ
Trigger: CTGGAATGAGTTCCACAAGTATGAATTTATTGCTACACTGGATCAGCAGCCTTGCAAATACTGGGCCATTTCATTAGAGGACAACTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
3UTR TCA 90 bp CAAATGTCTTTCAAAGTTTCAAGCTCCTCTATAAGCTTCTTGTTCTaGACTTCCAGCACTGCGACTCGACTCTCAAGACACTTCACATAC +
Preference number: 1 (lower is better)
Translates to: QMSFKVSSSSISFLF*TSSTATRLSRHFTY
Trigger: GTATGTGAAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGCTTATAGAGGAGCTTGAAACTTTGAAAGACATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000134027.8
ENSMUST00000137568.8
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
3UTR CAA 90 bp GGGCAGCTTCCCTGTTTTTCATCAGCCTCAGCTCCCGCTTGCGAGTaGCTTCTTCTGCTAGTTGCTGGGGACTGTGCAGGCTTCCTGGTG +
Preference number: 2 (lower is better)
Translates to: GQLPCFSSASAPACE*LLLLVAGDCAGFLV
Trigger: CACCAGGAAGCCTGCACAGTCCCCAGCAACTAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCTGATGAAAAACAGGGAAGCTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000134027.8
ENSMUST00000148305.2
3UTR-3UTR GCA 90 bp GGGGACTGTGCAGGCTTCCTGGTGAGGCAGCCATCACCACACCTTGTGGCAAAGCTGAACTTCCAGCACTaGGACTCGACTCTCAAGACA +
Preference number: 2 (lower is better)
Translates to: GDCAGFLVRQPSPHLVAKLNFQH*DSTLKT
Trigger: TGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAG...CTTTGCCACAAGGTGTGGTGATGGCTGCCTCACCAGGAAGCCTGCACAGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134027.8
3UTR-3UTR TCA 90 bp GAGACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCGCAAGCTTGGTAATGTaGGGGGAGCTGCATTCCAAC +
Preference number: 2 (lower is better)
Translates to: ETHLQVHMAIMRMLHRLPASLVM*GELHSN
Trigger: GTTGGAATGCAGCTCCCCTCACATTACCAAGCTTGC...GGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000134027.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
3UTR-3UTR GCA 90 bp CTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAACACAGTTGCTGGGGACTGTaGAGGCTTCCTGGTGAGGCA +
Preference number: 2 (lower is better)
Translates to: LHRLPRLEFTVNKVQIKHSCWGL*RLPGEA
Trigger: TGCCTCACCAGGAAGCCTGCACAGTCCCCAGCAACT...GTGTTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000134027.8
ENSMUST00000148305.2
3UTR-3UTR GCA 90 bp TTCTGGCCCACATCCGTAATCCAAGCACTCAGAAGGCTGAGGCAAGAGAACTGTAGCATGCCAGGCAAGTaGTCCACACTGAACTCTGCT +
Preference number: 2 (lower is better)
Translates to: FWPTSVIQALRRLRQENCSMPGK*STLNSA
Trigger: AGCAGAGTTCAGTGTGGAGCACTTGCCTGGCATGCT...ACAGTTCTCTTGCCTCAGCCTTCTGAGTGCTTGGATTACGGATGTGGGCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
3UTR-3UTR CCA 90 bp TTCTGGCCCACATCCGTAATCCAAGCACTCAGAAGGCTGAGGCAAGAGAACTGTTCTAACCTCTTCCCCTaGACCCCATTCCATTTGCAG +
Preference number: 2 (lower is better)
Translates to: FWPTSVIQALRRLRQENCSNLFP*TPFHLQ
Trigger: CTGCAAATGGAATGGGGTCCAGGGGAAGAGGTTAGA...ACAGTTCTCTTGCCTCAGCCTTCTGAGTGCTTGGATTACGGATGTGGGCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
3UTR-3UTR CCA 90 bp ACTCCCGGGCAGCTTCCCTGTTTTTCATCAGCCTCAGCTCCCGCTTGCGAGTTGTTTCTTCTTCAATCTTaGGAATACCAGGCACATCAG +
Preference number: 2 (lower is better)
Translates to: TPGQLPCFSSASAPACELFLLQS*EYQAHQ
Trigger: CTGATGTGCCTGGTATTCCCAAGATTGAAGAAGAAA...CAACTCGCAAGCGGGAGCTGAGGCTGATGAAAAACAGGGAAGCTGCCCGGGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000134027.8
3UTR-3UTR TCA 90 bp ATGCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAAGCAAGCTTGGTAATGTaGGGGGAGCTGCATTCCAAC +
Preference number: 2 (lower is better)
Translates to: MLHRLPRLEFTVNKVQIKASLVM*GELHSN
Trigger: GTTGGAATGCAGCTCCCCTCACATTACCAAGCTTGC...TTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000134027.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
3UTR-3UTR TCA 90 bp TTCTGGCCCACATCCGTAATCCAAGCACTCAGAAGGCTGAGGCAAGAGAACTGTATAAGCTTCTTGTTCTaGACTTCCAGCACTGCGACT +
Preference number: 2 (lower is better)
Translates to: FWPTSVIQALRRLRQENCISFLF*TSSTAT
Trigger: AGTCGCAGTGCTGGAAGTTCAGAACAAGAAGCTTAT...ACAGTTCTCTTGCCTCAGCCTTCTGAGTGCTTGGATTACGGATGTGGGCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000154135.8
ENSMUST00000165086.8
3UTR-3UTR TCA 90 bp CCTAGAGCCCTGCAGTTGTCCTCTAATGAAATGGCCCAGTATTTGCAAGGCTGCATAGGACACTATTCATaGCAGAGAGACTGGGAACTG +
Preference number: 2 (lower is better)
Translates to: PRALQLSSNEMAQYLQGCIGHYS*QRDWEL
Trigger: CAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCTAT...GCAGCCTTGCAAATACTGGGCCATTTCATTAGAGGACAACTGCAGGGCTCTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
3UTR-3UTR GCA 90 bp GCTTCTTGTTCTGAACTTCCAGCACTGCGACTCGACTCTCAAGACACTTCACATCTGAACTTCCAGCACTaGGACTCGACTCTCAAGACA +
Preference number: 2 (lower is better)
Translates to: ASCSELPALRLDSQDTSHLNFQH*DSTLKT
Trigger: TGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAG...ATGTGAAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000134027.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
3UTR-3UTR CCA 90 bp CCTAGAGCCCTGCAGTTGTCCTCTAATGAAATGGCCCAGTATTTGCAAGGCTGCAACTGTCTTCAACTGTaGCACCCAAGGACAGCAATA +
Preference number: 2 (lower is better)
Translates to: PRALQLSSNEMAQYLQGCNCLQL*HPRTAI
Trigger: TATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTT...GCAGCCTTGCAAATACTGGGCCATTTCATTAGAGGACAACTGCAGGGCTCTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
3UTR-3UTR CCA 90 bp TTCTGGCCCACATCCGTAATCCAAGCACTCAGAAGGCTGAGGCAAGAGAACTGTAACTGTCTTCAACTGTaGCACCCAAGGACAGCAATA +
Preference number: 2 (lower is better)
Translates to: FWPTSVIQALRRLRQENCNCLQL*HPRTAI
Trigger: TATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTT...ACAGTTCTCTTGCCTCAGCCTTCTGAGTGCTTGGATTACGGATGTGGGCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
3UTR-3UTR TCA 90 bp TATAAGCTTCTTGTTCTGAACTTCCAGCACTGCGACTCGACTCTCAAGACACTTGCAAGCTTGGTAATGTaGGGGGAGCTGCATTCCAAC +
Preference number: 2 (lower is better)
Translates to: YKLLVLNFQHCDSTLKTLASLVM*GELHSN
Trigger: GTTGGAATGCAGCTCCCCTCACATTACCAAGCTTGC...AAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGCTTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000134027.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
3UTR-3UTR TCA 90 bp ACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCAGCTTCCCTGAAGCAAGCTTGGTAATGTaGGGGGAGCTGCATTCCAAC +
Preference number: 2 (lower is better)
Translates to: TLHILFLSTSTFFSSFPEASLVM*GELHSN
Trigger: GTTGGAATGCAGCTCCCCTCACATTACCAAGCTTGC...TTCAGGGAAGCTGCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000134027.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
3UTR-3UTR TCA 90 bp ATGCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAAATAAGCTTCTTGTTCTaGACTTCCAGCACTGCGACT +
Preference number: 2 (lower is better)
Translates to: MLHRLPRLEFTVNKVQIKISFLF*TSSTAT
Trigger: AGTCGCAGTGCTGGAAGTTCAGAACAAGAAGCTTAT...TTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000134027.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
3UTR-3UTR TCA 90 bp GCTTCTTGTTCTGAACTTCCAGCACTGCGACTCGACTCTCAAGACACTTCACATATAGGACACTATTCATaGCAGAGAGACTGGGAACTG +
Preference number: 2 (lower is better)
Translates to: ASCSELPALRLDSQDTSHIGHYS*QRDWEL
Trigger: CAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCTAT...ATGTGAAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
3UTR-3UTR GCA 90 bp GAGACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCAGAATCATCTGTCTCTaGAATTGTTGCTACCTTTTT +
Preference number: 2 (lower is better)
Translates to: ETHLQVHMAIMRMLHRLPRIICL*NCCYLF
Trigger: AAAAAGGTAGCAACAATTGCAGAGACAGATGATTCT...GGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134027.8
3UTR-3UTR GCA 90 bp TCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTTTACAAAGTGACGATCTGAACTTCCAGCACTaGGACTCGACTCTCAAGACA +
Preference number: 2 (lower is better)
Translates to: STVAPKDSNTILSLQSDDLNFQH*DSTLKT
Trigger: TGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAG...ATCGTCACTTTGTAAAGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000154135.8
ENSMUST00000165086.8
3UTR-3UTR TCA 90 bp TATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTGCAAGCTTGGTAATGTaGGGGGAGCTGCATTCCAAC +
Preference number: 2 (lower is better)
Translates to: YLKLSSTVAPKDSNTILSASLVM*GELHSN
Trigger: GTTGGAATGCAGCTCCCCTCACATTACCAAGCTTGC...AGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000154135.8
ENSMUST00000165086.8
3UTR-3UTR TCA 90 bp ACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCAGCTTCCCTGAAATAAGCTTCTTGTTCTaGACTTCCAGCACTGCGACT +
Preference number: 2 (lower is better)
Translates to: TLHILFLSTSTFFSSFPEISFLF*TSSTAT
Trigger: AGTCGCAGTGCTGGAAGTTCAGAACAAGAAGCTTAT...TTCAGGGAAGCTGCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000134027.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
3UTR-3UTR CCA 90 bp GCTTCTTGTTCTGAACTTCCAGCACTGCGACTCGACTCTCAAGACACTTCACATATTTTATCTTACTACTaGAGAGATGCACTGCCTTTG +
Preference number: 2 (lower is better)
Translates to: ASCSELPALRLDSQDTSHILSYY*RDALPL
Trigger: CAAAGGCAGTGCATCTCTCCAGTAGTAAGATAAAAT...ATGTGAAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000154135.8
ENSMUST00000165086.8
3UTR-3UTR TCA 90 bp GTATTTGCAAGGCTGCTGATCCAGTGTAGCAATAAATTCATACTTGTGGAACTCATAGGACACTATTCATaGCAGAGAGACTGGGAACTG +
Preference number: 2 (lower is better)
Translates to: VFARLLIQCSNKFILVELIGHYS*QRDWEL
Trigger: CAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCTAT...GAGTTCCACAAGTATGAATTTATTGCTACACTGGATCAGCAGCCTTGCAAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
3UTR-3UTR TCA 90 bp ACCCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCTCATCGTGGAGTTTGTaGTGTCACAATACAGCTAAG +
Preference number: 2 (lower is better)
Translates to: THGTVFPIHTLQQTVFLSSSWSL*CHNTAK
Trigger: CTTAGCTGTATTGTGACATCACAAACTCCACGATGA...GCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134027.8
3UTR-3UTR CCA 90 bp ATGCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAATCTACTAATCTGTTTTaGGAGAGCAAATGTCTTTCA +
Preference number: 2 (lower is better)
Translates to: MLHRLPRLEFTVNKVQIKSTNLF*ESKCLS
Trigger: TGAAAGACATTTGCTCTCCCAAAACAGATTAGTAGA...TTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000131899.8
ENSMUST00000151084.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
3UTR-3UTR CCA 90 bp GCTTCTTGTTCTGAACTTCCAGCACTGCGACTCGACTCTCAAGACACTTCACATTCTACTAATCTGTTTTaGGAGAGCAAATGTCTTTCA +
Preference number: 2 (lower is better)
Translates to: ASCSELPALRLDSQDTSHSTNLF*ESKCLS
Trigger: TGAAAGACATTTGCTCTCCCAAAACAGATTAGTAGA...ATGTGAAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000131899.8
ENSMUST00000151084.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
3UTR-3UTR GCA 90 bp CAGCAAAGCAGCACAAACTTTTGTAGAAATTCACATACTACATACATAGTAGGACTGAACTTCCAGCACTaGGACTCGACTCTCAAGACA +
Preference number: 2 (lower is better)
Translates to: QQSSTNFCRNSHTTYIVGLNFQH*DSTLKT
Trigger: TGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAG...TCCTACTATGTATGTAGTATGTGAATTTCTACAAAAGTTTGTGCTGCTTTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000154135.8
ENSMUST00000165086.8
3UTR-3UTR GCA 90 bp ATTTCATTTGAATGTTCTGGCATAAGGATATTTTATCATGGACCTGGAGAGATGACTGAACATGTAGCATaGCAGGCAAGTGCTCCACAC +
Preference number: 2 (lower is better)
Translates to: ISFECSGIRIFYHGPGEMTEHVA*QASAPH
Trigger: GTGTGGAGCACTTGCCTGGCATGCTACATGTTCAGT...CATCTCTCCAGGTCCATGATAAAATATCCTTATGCCAGAACATTCAAATGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151311.8
3UTR-3UTR TCA 90 bp TATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTATAAGCTTCTTGTTCTaGACTTCCAGCACTGCGACT +
Preference number: 2 (lower is better)
Translates to: YLKLSSTVAPKDSNTILSISFLF*TSSTAT
Trigger: AGTCGCAGTGCTGGAAGTTCAGAACAAGAAGCTTAT...AGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000154135.8
ENSMUST00000165086.8
3UTR-3UTR TCA 90 bp ACCCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCGGTATCTCTATGGGTTaGTTTTATCTTACTACTGGA +
Preference number: 2 (lower is better)
Translates to: THGTVFPIHTLQQTVFLSGISMG*FYLTTG
Trigger: TCCAGTAGTAAGATAAAATCAACCCATAGAGATACC...GCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000154135.8
ENSMUST00000165086.8
3UTR-3UTR CCA 90 bp TGGACACAGTATATAACATTACACACATCCCCAAGGACCCAAGCAGTTATTTCCAGTGTAATAAGTTGTTaGCAACAAATGCCAGCAACA +
Preference number: 2 (lower is better)
Translates to: WTQYITLHTSPRTQAVISSVISC*QQMPAT
Trigger: TGTTGCTGGCATTTGTTGCCAACAACTTATTACACT...GGAAATAACTGCTTGGGTCCTTGGGGATGTGTGTAATGTTATATACTGTGTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149803.8
3UTR-3UTR TCA 90 bp ATTTGGACACAGTATATAACATTACACACATCCCCAAGGACCCAAGCAGTTATTGTACTGTTTATTCTGTaGTGCACAGCTGTTAACGAT +
Preference number: 2 (lower is better)
Translates to: IWTQYITLHTSPRTQAVIVLFIL*CTAVND
Trigger: ATCGTTAACAGCTGTGCATCACAGAATAAACAGTAC...AATAACTGCTTGGGTCCTTGGGGATGTGTGTAATGTTATATACTGTGTCCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149803.8
3UTR-3UTR TCA 90 bp CAGCAAAGCAGCACAAACTTTTGTAGAAATTCACATACTACATACATAGTAGGAGGTATCTCTATGGGTTaGTTTTATCTTACTACTGGA +
Preference number: 2 (lower is better)
Translates to: QQSSTNFCRNSHTTYIVGGISMG*FYLTTG
Trigger: TCCAGTAGTAAGATAAAATCAACCCATAGAGATACC...TCCTACTATGTATGTAGTATGTGAATTTCTACAAAAGTTTGTGCTGCTTTGCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
3UTR GCA 72 bp CAGCTTCCCTGTTTTTCATCAGCCTCAGCTCCCGCTTaGGAGTTGCTTCTTCTGCTAGTTGCTGGGGACTGT +
Preference number: 3 (lower is better)
Translates to: QLPCFSSASAPA*ELLLLLVAGDC
Trigger: ACAGTCCCCAGCAACTAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCTGATGAAAAACAGGGAAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000134027.8
ENSMUST00000148305.2
3UTR CCA 72 bp TGGCAAAGCAGTAGTAGGAGCTCGGATCTGGTAAGTTaGCATGTCACCTGTGGCAGTGTATTGCCCCGTGCT +
Preference number: 3 (lower is better)
Translates to: WQSSSRSSDLVS*HVTCGSVLPRA
Trigger: AGCACGGGGCAATACACTGCCACAGGTGACATGCCAACTTACCAGATCCGAGCTCCTACTACTGCTTTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134027.8
3UTR-3UTR CAA 90 bp ATGCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAAAGGTCTTTGAGGGCCTaGAGTTCCTCAATGAGGGTC +
Preference number: 3 (lower is better)
Translates to: MLHRLPRLEFTVNKVQIKRSLRA*SSSMRV
Trigger: GACCCTCATTGAGGAACTCAAGGCCCTCAAAGACCT...TTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000134027.8
ENSMUST00000148305.2
3UTR TCA 72 bp ATGTCACCTGTGGCAGTGTATTGCCCCGTGCTAGTCTaGTATATGCTAGTTGGTACTGCCATGGTAGCAATG +
Preference number: 3 (lower is better)
Translates to: MSPVAVYCPVLV*YMLVGTAMVAM
Trigger: CATTGCTACCATGGCAGTACCAACTAGCATATATCAGACTAGCACGGGGCAATACACTGCCACAGGTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134027.8
3UTR GCA 72 bp TTGCCCCGTGCTAGTCTGATATATGCTAGTTGGTACTaGCATGGTAGCAATGTTAGGTGGTGTCCCTTCTTC +
Preference number: 3 (lower is better)
Translates to: LPRASLIYASWY*HGSNVRWCPFF
Trigger: GAAGAAGGGACACCACCTAACATTGCTACCATGGCAGTACCAACTAGCATATATCAGACTAGCACGGGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134027.8
3UTR-3UTR CAA 90 bp ACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTAGAGTTATATGTTGCATGCTATaGGCAATAGAGCAAGCTTGG +
Preference number: 3 (lower is better)
Translates to: TSPHGHYEDAASPAPIRVICCML*AIEQAW
Trigger: CCAAGCTTGCTCTATTGCCAATAGCATGCAACATAT...AACTCTAATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000134027.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
3UTR-3UTR CAA 90 bp AGGGATCCGAGCTTATACCTTGAGTCTTTTCCTTATAAAAACAACTATGGACGCTGGACCCCATTCCATTaGCAGAGCTTGAGGTCTTCC +
Preference number: 3 (lower is better)
Translates to: RDPSLYLESFPYKNNYGRWTPFH*QSLRSS
Trigger: GGAAGACCTCAAGCTCTGCAAATGGAATGGGGTCCA...GCGTCCATAGTTGTTTTTATAAGGAAAAGACTCAAGGTATAAGCTCGGATCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000151311.8
3UTR-3UTR CAA 90 bp AGTCAACAAGGTCCAAATCAAACACAGTTACTCTGCTTTATGGCAATAAAGGTCGCTCCCGCTTGCGAGTaGCTTCTTCTGCTAGTTGCT +
Preference number: 3 (lower is better)
Translates to: SQQGPNQTQLLCFMAIKVAPACE*LLLLVA
Trigger: AGCAACTAGCAGAAGAAGCAACTCGCAAGCGGGAGC...GACCTTTATTGCCATAAAGCAGAGTAACTGTGTTTGATTTGGACCTTGTTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134027.8
ENSMUST00000148305.2
3UTR TCA 72 bp TTGCATGCTATTGGCAATAGAGCAAGCTTGGTAATGTaGGGGGAGCTGCATTCCAACCCATGGAACAGTATT +
Preference number: 3 (lower is better)
Translates to: LHAIGNRASLVM*GELHSNPWNSI
Trigger: AATACTGTTCCATGGGTTGGAATGCAGCTCCCCTCACATTACCAAGCTTGCTCTATTGCCAATAGCATGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000134027.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
3UTR-3UTR CAA 90 bp ATGCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAACTGTCTCTGCAATTGTaGCTACCTTTTTATCCAGAT +
Preference number: 3 (lower is better)
Translates to: MLHRLPRLEFTVNKVQIKLSLQL*LPFYPD
Trigger: ATCTGGATAAAAAGGTAGCAACAATTGCAGAGACAG...TTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134027.8
3UTR TCA 72 bp TTCAAAGTTTCAAGCTCCTCTATAAGCTTCTTGTTCTaGACTTCCAGCACTGCGACTCGACTCTCAAGACAC +
Preference number: 3 (lower is better)
Translates to: FKVSSSSISFLF*TSSTATRLSRH
Trigger: GTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGCTTATAGAGGAGCTTGAAACTTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000134027.8
ENSMUST00000137568.8
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
3UTR-3UTR CAA 90 bp GCAACCAACATGGTTCTATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGATATGTTGCATGCTATaGGCAATAGAGCAAGCTTGG +
Preference number: 3 (lower is better)
Translates to: ATNMVLFKTVFNCGTQGQICCML*AIEQAW
Trigger: CCAAGCTTGCTCTATTGCCAATAGCATGCAACATAT...CTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATAGAACCATGTTGGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000154135.8
ENSMUST00000165086.8
3UTR-3UTR CAA 90 bp ACAACTATCTATAACTCTAGCTCCAGGGGAGCTTTTGGCCTTCTTGGGAACCCAAGGTATCTCTATGGGTaGATTTTATCTTACTACTGG +
Preference number: 3 (lower is better)
Translates to: TTIYNSSSRGAFGLLGNPRYLYG*ILSYYW
Trigger: CCAGTAGTAAGATAAAATCAACCCATAGAGATACCT...TGGGTTCCCAAGAAGGCCAAAAGCTCCCCTGGAGCTAGAGTTATAGATAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000151311.8
3UTR-3UTR CAA 90 bp CTATGGGTTGATTTTATCTTACTACTGGAGAGATGCACTGCCTTTGATCACCCTATATGTTGCATGCTATaGGCAATAGAGCAAGCTTGG +
Preference number: 3 (lower is better)
Translates to: LWVDFILLLERCTAFDHPICCML*AIEQAW
Trigger: CCAAGCTTGCTCTATTGCCAATAGCATGCAACATAT...AGGGTGATCAAAGGCAGTGCATCTCTCCAGTAGTAAGATAAAATCAACCCATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000154135.8
ENSMUST00000165086.8
3UTR-3UTR CAA 90 bp TCGACTCTCAAGACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCATATGTTGCATGCTATaGGCAATAGAGCAAGCTTGG +
Preference number: 3 (lower is better)
Translates to: STLKTLHILFLSTSTFFSICCML*AIEQAW
Trigger: CCAAGCTTGCTCTATTGCCAATAGCATGCAACATAT...GCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGTCTTGAGAGTCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000134027.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
3UTR-3UTR CAA 90 bp GTATTTGCAAGGCTGCTGATCCAGTGTAGCAATAAATTCATACTTGTGGAACTCATATGTTGCATGCTATaGGCAATAGAGCAAGCTTGG +
Preference number: 3 (lower is better)
Translates to: VFARLLIQCSNKFILVELICCML*AIEQAW
Trigger: CCAAGCTTGCTCTATTGCCAATAGCATGCAACATAT...GAGTTCCACAAGTATGAATTTATTGCTACACTGGATCAGCAGCCTTGCAAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000154135.8
ENSMUST00000165086.8
3UTR-3UTR CAA 90 bp ACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCAGCTTCCCTGAACTTGCCGGCTATATATaGTATTGCATTCAAAAGCAA +
Preference number: 3 (lower is better)
Translates to: TLHILFLSTSTFFSSFPELAGYI*YCIQKQ
Trigger: TTGCTTTTGAATGCAATACAATATATAGCCGGCAAG...TTCAGGGAAGCTGCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000131899.8
ENSMUST00000151084.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
3UTR-3UTR CAA 90 bp ACCCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAGGTATCTCTATGGGTaGATTTTATCTTACTACTGG +
Preference number: 3 (lower is better)
Translates to: THGTVFPIHTLQQTVFLSRYLYG*ILSYYW
Trigger: CCAGTAGTAAGATAAAATCAACCCATAGAGATACCT...GCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000154135.8
ENSMUST00000165086.8
3UTR TCA 72 bp CTCTGCAATTGTTGCTACCTTTTTATCCAGATCCCCTaGAGAATAATCTTCTTCTATAGGATGCCTGAAGCA +
Preference number: 3 (lower is better)
Translates to: LCNCCYLFIQIP*RIIFFYRMPEA
Trigger: TGCTTCAGGCATCCTATAGAAGAAGATTATTCTTCAGGGGATCTGGATAAAAAGGTAGCAACAATTGCAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000134027.8
3UTR-3UTR CAA 90 bp AGTCAACAAGGTCCAAATCAAACACAGTTACTCTGCTTTATGGCAATAAAGGTCTTTTCTTCTTCAATCTaGGGAATACCAGGCACATCA +
Preference number: 3 (lower is better)
Translates to: SQQGPNQTQLLCFMAIKVFSSSI*GIPGTS
Trigger: TGATGTGCCTGGTATTCCCAAGATTGAAGAAGAAAA...GACCTTTATTGCCATAAAGCAGAGTAACTGTGTTTGATTTGGACCTTGTTGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134027.8
3UTR-3UTR CAA 90 bp ATTTGGACACAGTATATAACATTACACACATCCCCAAGGACCCAAGCAGTTATTAAGTGTAATAAGTTGTaGGCAACAAATGCCAGCAAC +
Preference number: 3 (lower is better)
Translates to: IWTQYITLHTSPRTQAVIKCNKL*ATNASN
Trigger: GTTGCTGGCATTTGTTGCCAACAACTTATTACACTT...AATAACTGCTTGGGTCCTTGGGGATGTGTGTAATGTTATATACTGTGTCCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149803.8
3UTR TCA 72 bp AAGAATTTCTCTACGTTTATGCGAATCAATTACTTCTaGGTCTGCAGAATCATCTGTCTCTGCAATTGTTGC +
Preference number: 3 (lower is better)
Translates to: KNFSTFMRINYF*VCRIICLCNCC
Trigger: GCAACAATTGCAGAGACAGATGATTCTGCAGACTCAGAAGTAATTGATTCGCATAAACGTAGAGAAATTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134027.8
CDS-3UTR CCA 90 bp CTCCCGGGCAGCTTCCCTGTTTTTCATCAGCCTCAGCTCCCGCTTGCGAGTTGCTCGGATCTGGTAAGTTaGCATGTCACCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LPGSFPVFHQPQLPLASCSDLVS*HVTCGS
Trigger: GCTGCCACAGGTGACATGCCAACTTACCAGATCCGA...GCAACTCGCAAGCGGGAGCTGAGGCTGATGAAAAACAGGGAAGCTGCCCGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000148305.2
CDS-3UTR CCA 90 bp CCCGGGCAGCTTCCCTGTTTTTCATCAGCCTCAGCTCCCGCTTGCGAGTTGCTTAGCAGCCATGTGACTTaGGGCAAGGTCAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PGQLPCFSSASAPACELLSSHVT*GKVSLL
Trigger: GAGGAGACTGACCTTGCCCCAAGTCACATGGCTGCT...AAGCAACTCGCAAGCGGGAGCTGAGGCTGATGAAAAACAGGGAAGCTGCCCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000148305.2
CDS-3UTR CCA 90 bp GACACTCCCGGGCAGCTTCCCTGTTTTTCATCAGCCTCAGCTCCCGCTTGCGAGTTGGCATGTCACCTGTaGCAGCAGCCATGTGACTTG +
Preference number: 4 (lower is better)
Translates to: DTPGQLPCFSSASAPACELACHL*QQPCDL
Trigger: CAAGTCACATGGCTGCTGCCACAGGTGACATGCCAA...CTCGCAAGCGGGAGCTGAGGCTGATGAAAAACAGGGAAGCTGCCCGGGAGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000148305.2
CDS-3UTR GCA 90 bp GAGACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCAGTTGCTGGGGACTGTaGAGGCTTCCTGGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: ETHLQVHMAIMRMLHRLPSCWGL*RLPGEA
Trigger: TGCCTCACCAGGAAGCCTGCACAGTCCCCAGCAACT...GGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp GACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGGCCTCAGCTCCCGCTTaGGAGTTGCTTCTTCTGCTA +
Preference number: 4 (lower is better)
Translates to: DPSTSPHGHYEDAASPAPASAPA*ELLLLL
Trigger: TAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGC...CGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
3UTR CAA 72 bp CCCTGTTTTTCATCAGCCTCAGCTCCCGCTTGCGAGTaGCTTCTTCTGCTAGTTGCTGGGGACTGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: PCFSSASAPACE*LLLLVAGDCAG
Trigger: GCCTGCACAGTCCCCAGCAACTAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCTGATGAAAAACAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000134027.8
ENSMUST00000148305.2
CDS-3UTR GCA 90 bp GACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGGGGAGCCTCTTCCAGTaGCTGATCCAGCTACAGAAA +
Preference number: 4 (lower is better)
Translates to: DPSTSPHGHYEDAASPAPGSLFQ*LIQLQK
Trigger: TTTCTGTAGCTGGATCAGGCACTGGAAGAGGCTCCC...CGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTAGTTGCTGGGGACTGTaGAGGCTTCCTGGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: PSTSPHGHYEDAASPAPISCWGL*RLPGEA
Trigger: TGCCTCACCAGGAAGCCTGCACAGTCCCCAGCAACT...AATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp GACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGGCTTCTTCTGCTAGTTaGTGGGGACTGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: DPSTSPHGHYEDAASPAPASSAS*WGLCRL
Trigger: AAGCCTGCACAGTCCCCAGCAACTAGCAGAAGAAGC...CGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
3UTR CAA 72 bp GCAGCTTCCCTGTTTTTCATCAGCCTCAGCTCCCGCTaGCGAGTTGCTTCTTCTGCTAGTTGCTGGGGACTG +
Preference number: 4 (lower is better)
Translates to: AASLFFISLSSR*RVASSASCWGL
Trigger: CAGTCCCCAGCAACTAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCTGATGAAAAACAGGGAAGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000134027.8
ENSMUST00000148305.2
CDS-3UTR TCA 90 bp CTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTAGAGAATGCCTGGAGTCCCTaGACACCATCAGATCCTGGG +
Preference number: 4 (lower is better)
Translates to: LQVHMAIMRMLHRLPRLENAWSP*TPSDPG
Trigger: CCCAGGATCTGATGGTGTTCAGGGACTCCAGGCATT...CTCTAATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR GCA 90 bp CCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTGCCTCAGCTCCCGCTTaGGAGTTGCTTCTTCTGCTA +
Preference number: 4 (lower is better)
Translates to: PSTSPHGHYEDAASPAPIASAPA*ELLLLL
Trigger: TAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGC...AATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTAGAGGCCTCAGCTCCCGCTTaGGAGTTGCTTCTTCTGCTA +
Preference number: 4 (lower is better)
Translates to: LQVHMAIMRMLHRLPRLEASAPA*ELLLLL
Trigger: TAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGC...CTCTAATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp GACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGAACAACCTGGCTGCCTaGGACAAAGAACTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: DPSTSPHGHYEDAASPAPNNLAA*DKELLC
Trigger: ACACAGCAGTTCTTTGTCCCAGGCAGCCAGGTTGTT...CGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR CCA 90 bp GAGACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCTCTTCTGCTAGTTGCTaGGGACTGTGCAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: ETHLQVHMAIMRMLHRLPSSASC*GLCRLP
Trigger: AGGAAGCCTGCACAGTCCCCAGCAACTAGCAGAAGA...GGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp CCTAGAGCCCTGCAGTTGTCCTCTAATGAAATGGCCCAGTATTTGCAAGGCTGCAATGCCTGGAGTCCCTaGACACCATCAGATCCTGGG +
Preference number: 4 (lower is better)
Translates to: PRALQLSSNEMAQYLQGCNAWSP*TPSDPG
Trigger: CCCAGGATCTGATGGTGTTCAGGGACTCCAGGCATT...GCAGCCTTGCAAATACTGGGCCATTTCATTAGAGGACAACTGCAGGGCTCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR GCA 90 bp GCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAACAAGTTGCTGGGGACTGTaGAGGCTTCCTGGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: AASPAPIRVHSQQGPNQTSCWGL*RLPGEA
Trigger: TGCCTCACCAGGAAGCCTGCACAGTCCCCAGCAACT...TGTTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CCTAGAGCCCTGCAGTTGTCCTCTAATGAAATGGCCCAGTATTTGCAAGGCTGCGCCTCAGCTCCCGCTTaGGAGTTGCTTCTTCTGCTA +
Preference number: 4 (lower is better)
Translates to: PRALQLSSNEMAQYLQGCASAPA*ELLLLL
Trigger: TAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGC...GCAGCCTTGCAAATACTGGGCCATTTCATTAGAGGACAACTGCAGGGCTCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp CCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTTCGGATCTGGTAAGTTaGCATGTCACCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PSTSPHGHYEDAASPAPISDLVS*HVTCGS
Trigger: GCTGCCACAGGTGACATGCCAACTTACCAGATCCGA...AATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000148305.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp GAGACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCATCACCACACCTTGTaGCAAAGCAGTAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: ETHLQVHMAIMRMLHRLPHHHTL*QSSSRS
Trigger: GCTCCTACTACTGCTTTGCCACAAGGTGTGGTGATG...GGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp CCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTTCTTCTGCTAGTTGCTaGGGACTGTGCAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: PSTSPHGHYEDAASPAPISSASC*GLCRLP
Trigger: AGGAAGCCTGCACAGTCCCCAGCAACTAGCAGAAGA...AATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp ACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTAGAGTTAGCAGCCATGTGACTTaGGGCAAGGTCAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: TSPHGHYEDAASPAPIRVSSHVT*GKVSLL
Trigger: GAGGAGACTGACCTTGCCCCAAGTCACATGGCTGCT...AACTCTAATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000131899.8
ENSMUST00000148305.2
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp GAGACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCTGCCCCGTGCTAGTCTaGTATATGCTAGTTGGTACT +
Preference number: 4 (lower is better)
Translates to: ETHLQVHMAIMRMLHRLPCPVLV*YMLVGT
Trigger: AGTACCAACTAGCATATATCAGACTAGCACGGGGCA...GGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp GCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAACAAATGCCTGGAGTCCCTaGACACCATCAGATCCTGGG +
Preference number: 4 (lower is better)
Translates to: AASPAPIRVHSQQGPNQTNAWSP*TPSDPG
Trigger: CCCAGGATCTGATGGTGTTCAGGGACTCCAGGCATT...TGTTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR TCA 90 bp CTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTAGAGTCAGTCTCCTCATCTTaGACAACAACCTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LQVHMAIMRMLHRLPRLESVSSS*TTTWLP
Trigger: AGGCAGCCAGGTTGTTGTTCAAGATGAGGAGACTGA...CTCTAATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000082141.12
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR TCA 90 bp TTCTGGCCCACATCCGTAATCCAAGCACTCAGAAGGCTGAGGCAAGAGAACTGTGCCTCTTCCAGTGCCTaGTCCAGCTACAGAAACCAT +
Preference number: 4 (lower is better)
Translates to: FWPTSVIQALRRLRQENCASSSA*SSYRNH
Trigger: ATGGTTTCTGTAGCTGGATCAGGCACTGGAAGAGGC...ACAGTTCTCTTGCCTCAGCCTTCTGAGTGCTTGGATTACGGATGTGGGCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000122958.8
CDS-3UTR GCA 90 bp GGTAATGTGAGGGGAGCTGCATTCCAACCCATGGAACAGTATTCCCAATTCACAAGTTGCTGGGGACTGTaGAGGCTTCCTGGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: GNVRGAAFQPMEQYSQFTSCWGL*RLPGEA
Trigger: TGCCTCACCAGGAAGCCTGCACAGTCCCCAGCAACT...TGTGAATTGGGAATACTGTTCCATGGGTTGGAATGCAGCTCCCCTCACATTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp ATGCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAAAGTTGCTGGGGACTGTaGAGGCTTCCTGGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: MLHRLPRLEFTVNKVQIKSCWGL*RLPGEA
Trigger: TGCCTCACCAGGAAGCCTGCACAGTCCCCAGCAACT...TTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp ACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTAGAGTTGCTTCTTCTGCTAGTTaGTGGGGACTGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: TSPHGHYEDAASPAPIRVASSAS*WGLCRL
Trigger: AAGCCTGCACAGTCCCCAGCAACTAGCAGAAGAAGC...AACTCTAATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp AGGATGCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCGCTTCTTCTGCTAGTTaGTGGGGACTGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: RMLHRLPRLEFTVNKVQIASSAS*WGLCRL
Trigger: AAGCCTGCACAGTCCCCAGCAACTAGCAGAAGAAGC...GATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp TTCTGGCCCACATCCGTAATCCAAGCACTCAGAAGGCTGAGGCAAGAGAACTGTGCTTCTTCTGCTAGTTaGTGGGGACTGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: FWPTSVIQALRRLRQENCASSAS*WGLCRL
Trigger: AAGCCTGCACAGTCCCCAGCAACTAGCAGAAGAAGC...ACAGTTCTCTTGCCTCAGCCTTCTGAGTGCTTGGATTACGGATGTGGGCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp GGGTTAAGAGACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGGCCTCAGCTCCCGCTTaGGAGTTGCTTCTTCTGCTA +
Preference number: 4 (lower is better)
Translates to: GLRDPSTSPHGHYEDAASASAPA*ELLLLL
Trigger: TAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGC...CGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTCTTAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp CCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTAACAACCTGGCTGCCTaGGACAAAGAACTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: PSTSPHGHYEDAASPAPINNLAA*DKELLC
Trigger: ACACAGCAGTTCTTTGTCCCAGGCAGCCAGGTTGTT...AATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR CCA 90 bp AGGATGCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCTCGGATCTGGTAAGTTaGCATGTCACCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: RMLHRLPRLEFTVNKVQISDLVS*HVTCGS
Trigger: GCTGCCACAGGTGACATGCCAACTTACCAGATCCGA...GATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000148305.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp CCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTCATCACCACACCTTGTaGCAAAGCAGTAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: PSTSPHGHYEDAASPAPIHHHTL*QSSSRS
Trigger: GCTCCTACTACTGCTTTGCCACAAGGTGTGGTGATG...AATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp CTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTAGAGCATCACCACACCTTGTaGCAAAGCAGTAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: LQVHMAIMRMLHRLPRLEHHHTL*QSSSRS
Trigger: GCTCCTACTACTGCTTTGCCACAAGGTGTGGTGATG...CTCTAATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp AGGATGCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCTCTTCTGCTAGTTGCTaGGGACTGTGCAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: RMLHRLPRLEFTVNKVQISSASC*GLCRLP
Trigger: AGGAAGCCTGCACAGTCCCCAGCAACTAGCAGAAGA...GATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp ACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTAGAGTTTCTTCTGCTAGTTGCTaGGGACTGTGCAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: TSPHGHYEDAASPAPIRVSSASC*GLCRLP
Trigger: AGGAAGCCTGCACAGTCCCCAGCAACTAGCAGAAGA...AACTCTAATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp CCTAGAGCCCTGCAGTTGTCCTCTAATGAAATGGCCCAGTATTTGCAAGGCTGCTCTTCTGCTAGTTGCTaGGGACTGTGCAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: PRALQLSSNEMAQYLQGCSSASC*GLCRLP
Trigger: AGGAAGCCTGCACAGTCCCCAGCAACTAGCAGAAGA...GCAGCCTTGCAAATACTGGGCCATTTCATTAGAGGACAACTGCAGGGCTCTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp GGGTTAAGAGACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGAGCAGCCATGTGACTTaGGGCAAGGTCAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: GLRDPSTSPHGHYEDAASSSHVT*GKVSLL
Trigger: GAGGAGACTGACCTTGCCCCAAGTCACATGGCTGCT...CGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTCTTAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000131899.8
ENSMUST00000148305.2
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp GCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAACAAGCAGCCATGTGACTTaGGGCAAGGTCAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: AASPAPIRVHSQQGPNQTSSHVT*GKVSLL
Trigger: GAGGAGACTGACCTTGCCCCAAGTCACATGGCTGCT...TGTTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000131899.8
ENSMUST00000148305.2
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp TTCTGGCCCACATCCGTAATCCAAGCACTCAGAAGGCTGAGGCAAGAGAACTGTTTGGCATGTCACCTGTaGCAGCAGCCATGTGACTTG +
Preference number: 4 (lower is better)
Translates to: FWPTSVIQALRRLRQENCLACHL*QQPCDL
Trigger: CAAGTCACATGGCTGCTGCCACAGGTGACATGCCAA...ACAGTTCTCTTGCCTCAGCCTTCTGAGTGCTTGGATTACGGATGTGGGCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp AGGATGCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCTTGGCATGTCACCTGTaGCAGCAGCCATGTGACTTG +
Preference number: 4 (lower is better)
Translates to: RMLHRLPRLEFTVNKVQILACHL*QQPCDL
Trigger: CAAGTCACATGGCTGCTGCCACAGGTGACATGCCAA...GATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000131899.8
ENSMUST00000148305.2
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp AGGATGCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCTCAGTCTCCTCATCTTaGACAACAACCTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RMLHRLPRLEFTVNKVQISVSSS*TTTWLP
Trigger: AGGCAGCCAGGTTGTTGTTCAAGATGAGGAGACTGA...GATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000082141.12
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR GCA 90 bp GACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGGTTACACTTCGATCCTaGTGTGATTCAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: DPSTSPHGHYEDAASPAPVTLRS*CDSTVS
Trigger: GGAAACAGTTGAATCACAGCAGGATCGAAGTGTAAC...CGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000134027.8
ENSMUST00000137568.8
ENSMUST00000148305.2
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CCTAGAGCCCTGCAGTTGTCCTCTAATGAAATGGCCCAGTATTTGCAAGGCTGCCCTGGGACAAAGAACTaGTGTGTACCATCGGCTGAT +
Preference number: 4 (lower is better)
Translates to: PRALQLSSNEMAQYLQGCPGTKN*CVPSAD
Trigger: ATCAGCCGATGGTACACAGCAGTTCTTTGTCCCAGG...GCAGCCTTGCAAATACTGGGCCATTTCATTAGAGGACAACTGCAGGGCTCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR GCA 90 bp CCTAGAGCCCTGCAGTTGTCCTCTAATGAAATGGCCCAGTATTTGCAAGGCTGCGAACAACAACCTGGCTaGCTGGGACAAAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: PRALQLSSNEMAQYLQGCEQQPG*LGQRTA
Trigger: AGCAGTTCTTTGTCCCAGGCAGCCAGGTTGTTGTTC...GCAGCCTTGCAAATACTGGGCCATTTCATTAGAGGACAACTGCAGGGCTCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR GCA 90 bp AGGGGAGCTGCATTCCAACCCATGGAACAGTATTCCCAATTCACACTCTACAGCGCTTCTTCTGCTAGTTaGTGGGGACTGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: RGAAFQPMEQYSQFTLYSASSAS*WGLCRL
Trigger: AAGCCTGCACAGTCCCCAGCAACTAGCAGAAGAAGC...GCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGTTGGAATGCAGCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp TTCTGGCCCACATCCGTAATCCAAGCACTCAGAAGGCTGAGGCAAGAGAACTGTCTGAACTTCCAGCACTaGGACTCGACTCTCAAGACA +
Preference number: 4 (lower is better)
Translates to: FWPTSVIQALRRLRQENCLNFQH*DSTLKT
Trigger: TGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAG...ACAGTTCTCTTGCCTCAGCCTTCTGAGTGCTTGGATTACGGATGTGGGCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR CCA 90 bp TTCTGGCCCACATCCGTAATCCAAGCACTCAGAAGGCTGAGGCAAGAGAACTGTAACAACCTGGCTGCCTaGGACAAAGAACTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: FWPTSVIQALRRLRQENCNNLAA*DKELLC
Trigger: ACACAGCAGTTCTTTGTCCCAGGCAGCCAGGTTGTT...ACAGTTCTCTTGCCTCAGCCTTCTGAGTGCTTGGATTACGGATGTGGGCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR CCA 90 bp CTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAACACTCGGATCTGGTAAGTTaGCATGTCACCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LHRLPRLEFTVNKVQIKHSDLVS*HVTCGS
Trigger: GCTGCCACAGGTGACATGCCAACTTACCAGATCCGA...GTGTTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000148305.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp GCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAACATCGGATCTGGTAAGTTaGCATGTCACCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: AASPAPIRVHSQQGPNQTSDLVS*HVTCGS
Trigger: GCTGCCACAGGTGACATGCCAACTTACCAGATCCGA...TGTTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000148305.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp ACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTAGAGTTCATCACCACACCTTGTaGCAAAGCAGTAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: TSPHGHYEDAASPAPIRVHHHTL*QSSSRS
Trigger: GCTCCTACTACTGCTTTGCCACAAGGTGTGGTGATG...AACTCTAATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp TTCTGGCCCACATCCGTAATCCAAGCACTCAGAAGGCTGAGGCAAGAGAACTGTCATCACCACACCTTGTaGCAAAGCAGTAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: FWPTSVIQALRRLRQENCHHHTL*QSSSRS
Trigger: GCTCCTACTACTGCTTTGCCACAAGGTGTGGTGATG...ACAGTTCTCTTGCCTCAGCCTTCTGAGTGCTTGGATTACGGATGTGGGCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp AGGGGAGCTGCATTCCAACCCATGGAACAGTATTCCCAATTCACACTCTACAGCTCTTCTGCTAGTTGCTaGGGACTGTGCAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: RGAAFQPMEQYSQFTLYSSSASC*GLCRLP
Trigger: AGGAAGCCTGCACAGTCCCCAGCAACTAGCAGAAGA...GCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGTTGGAATGCAGCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp ATGCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAAAGCAGCCATGTGACTTaGGGCAAGGTCAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: MLHRLPRLEFTVNKVQIKSSHVT*GKVSLL
Trigger: GAGGAGACTGACCTTGCCCCAAGTCACATGGCTGCT...TTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000131899.8
ENSMUST00000148305.2
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp AGGGGAGCTGCATTCCAACCCATGGAACAGTATTCCCAATTCACACTCTACAGCTTGGCATGTCACCTGTaGCAGCAGCCATGTGACTTG +
Preference number: 4 (lower is better)
Translates to: RGAAFQPMEQYSQFTLYSLACHL*QQPCDL
Trigger: CAAGTCACATGGCTGCTGCCACAGGTGACATGCCAA...GCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGTTGGAATGCAGCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000131899.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp GCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAACATTGGCATGTCACCTGTaGCAGCAGCCATGTGACTTG +
Preference number: 4 (lower is better)
Translates to: AASPAPIRVHSQQGPNQTLACHL*QQPCDL
Trigger: CAAGTCACATGGCTGCTGCCACAGGTGACATGCCAA...TGTTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000131899.8
ENSMUST00000148305.2
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
3UTR CAA 72 bp TGCTCCACACTGAACTCTGCTCCTAGAGCCCTGCAGTaGTCCTCTAATGAAATGGCCCAGTATTTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: CSTLNSAPRALQ*SSNEMAQYLQG
Trigger: GCCTTGCAAATACTGGGCCATTTCATTAGAGGACAACTGCAGGGCTCTAGGAGCAGAGTTCAGTGTGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp CTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTAGAGACTTCGATCCTGCTGTaGTTCAACTGTTTCCATGGT +
Preference number: 4 (lower is better)
Translates to: LQVHMAIMRMLHRLPRLETSILL*FNCFHG
Trigger: ACCATGGAAACAGTTGAATCACAGCAGGATCGAAGT...CTCTAATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000134027.8
ENSMUST00000137568.8
ENSMUST00000148305.2
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp CTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAACACGATGGATGTGGTGTCTaGATAACTCCCTGGACCTGT +
Preference number: 4 (lower is better)
Translates to: LHRLPRLEFTVNKVQIKHDGCGV*ITPWTC
Trigger: ACAGGTCCAGGGAGTTATTCAGACACCACATCCATC...GTGTTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp GGGTTAAGAGACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGGATGGATGTGGTGTCTaGATAACTCCCTGGACCTGT +
Preference number: 4 (lower is better)
Translates to: GLRDPSTSPHGHYEDAASDGCGV*ITPWTC
Trigger: ACAGGTCCAGGGAGTTATTCAGACACCACATCCATC...CGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTCTTAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp GACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGCGAATCAATTACTTCTaGGTCTGCAGAATCATCTGT +
Preference number: 4 (lower is better)
Translates to: DPSTSPHGHYEDAASPAPRINYF*VCRIIC
Trigger: ACAGATGATTCTGCAGACTCAGAAGTAATTGATTCG...CGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp ACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTAGAGTTTGCCCCGTGCTAGTCTaGTATATGCTAGTTGGTACT +
Preference number: 4 (lower is better)
Translates to: TSPHGHYEDAASPAPIRVCPVLV*YMLVGT
Trigger: AGTACCAACTAGCATATATCAGACTAGCACGGGGCA...AACTCTAATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp GAGACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCGTTACACTTCGATCCTaGTGTGATTCAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: ETHLQVHMAIMRMLHRLPVTLRS*CDSTVS
Trigger: GGAAACAGTTGAATCACAGCAGGATCGAAGTGTAAC...GGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000134027.8
ENSMUST00000137568.8
ENSMUST00000148305.2
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp GCTTCTTGTTCTGAACTTCCAGCACTGCGACTCGACTCTCAAGACACTTCACATGGGAGCCTCTTCCAGTaGCTGATCCAGCTACAGAAA +
Preference number: 4 (lower is better)
Translates to: ASCSELPALRLDSQDTSHGSLFQ*LIQLQK
Trigger: TTTCTGTAGCTGGATCAGGCACTGGAAGAGGCTCCC...ATGTGAAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp GACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGAGAATCATCTGTCTCTaGAATTGTTGCTACCTGAAC +
Preference number: 4 (lower is better)
Translates to: DPSTSPHGHYEDAASPAPRIICL*NCCYLN
Trigger: GTTCAGGTAGCAACAATTGCAGAGACAGATGATTCT...CGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp GCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAACACCTGGGACAAAGAACTaGTGTGTACCATCGGCTGAT +
Preference number: 4 (lower is better)
Translates to: AASPAPIRVHSQQGPNQTPGTKN*CVPSAD
Trigger: ATCAGCCGATGGTACACAGCAGTTCTTTGTCCCAGG...TGTTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR GCA 90 bp GGGTTAAGAGACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGGAACAACAACCTGGCTaGCTGGGACAAAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: GLRDPSTSPHGHYEDAASEQQPG*LGQRTA
Trigger: AGCAGTTCTTTGTCCCAGGCAGCCAGGTTGTTGTTC...CGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTCTTAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR GCA 90 bp TATAAGCTTCTTGTTCTGAACTTCCAGCACTGCGACTCGACTCTCAAGACACTTAGTTGCTGGGGACTGTaGAGGCTTCCTGGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: YKLLVLNFQHCDSTLKTLSCWGL*RLPGEA
Trigger: TGCCTCACCAGGAAGCCTGCACAGTCCCCAGCAACT...AAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGCTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAAGGGTTAAGAGACCCAAGTTGCTGGGGACTGTaGAGGCTTCCTGGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: PNSHSTADCILKQGLRDPSCWGL*RLPGEA
Trigger: TGCCTCACCAGGAAGCCTGCACAGTCCCCAGCAACT...TGGGTCTCTTAACCCTTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp CCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTTGGACCTGTACAGTTTaGCCTGAAGGTAACTGTACT +
Preference number: 4 (lower is better)
Translates to: PSTSPHGHYEDAASPAPIWTCTV*PEGNCT
Trigger: AGTACAGTTACCTTCAGGCCAAACTGTACAGGTCCA...AATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp GGTAATGTGAGGGGAGCTGCATTCCAACCCATGGAACAGTATTCCCAATTCACATCGGATCTGGTAAGTTaGCATGTCACCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: GNVRGAAFQPMEQYSQFTSDLVS*HVTCGS
Trigger: GCTGCCACAGGTGACATGCCAACTTACCAGATCCGA...TGTGAATTGGGAATACTGTTCCATGGGTTGGAATGCAGCTCCCCTCACATTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp GCTTCTTGTTCTGAACTTCCAGCACTGCGACTCGACTCTCAAGACACTTCACATTCGGATCTGGTAAGTTaGCATGTCACCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: ASCSELPALRLDSQDTSHSDLVS*HVTCGS
Trigger: GCTGCCACAGGTGACATGCCAACTTACCAGATCCGA...ATGTGAAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp GGGTTAAGAGACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCATCACCACACCTTGTaGCAAAGCAGTAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: GLRDPSTSPHGHYEDAASHHHTL*QSSSRS
Trigger: GCTCCTACTACTGCTTTGCCACAAGGTGTGGTGATG...CGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTCTTAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp AGGGGAGCTGCATTCCAACCCATGGAACAGTATTCCCAATTCACACTCTACAGCCATCACCACACCTTGTaGCAAAGCAGTAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: RGAAFQPMEQYSQFTLYSHHHTL*QSSSRS
Trigger: GCTCCTACTACTGCTTTGCCACAAGGTGTGGTGATG...GCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGTTGGAATGCAGCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp GCTTCTTGTTCTGAACTTCCAGCACTGCGACTCGACTCTCAAGACACTTCACATTCTTCTGCTAGTTGCTaGGGACTGTGCAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: ASCSELPALRLDSQDTSHSSASC*GLCRLP
Trigger: AGGAAGCCTGCACAGTCCCCAGCAACTAGCAGAAGA...ATGTGAAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp GGTAATGTGAGGGGAGCTGCATTCCAACCCATGGAACAGTATTCCCAATTCACATTGGCATGTCACCTGTaGCAGCAGCCATGTGACTTG +
Preference number: 4 (lower is better)
Translates to: GNVRGAAFQPMEQYSQFTLACHL*QQPCDL
Trigger: CAAGTCACATGGCTGCTGCCACAGGTGACATGCCAA...TGTGAATTGGGAATACTGTTCCATGGGTTGGAATGCAGCTCCCCTCACATTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000131899.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp GCTTCTTGTTCTGAACTTCCAGCACTGCGACTCGACTCTCAAGACACTTCACATGATGGATGTGGTGTCTaGATAACTCCCTGGACCTGT +
Preference number: 4 (lower is better)
Translates to: ASCSELPALRLDSQDTSHDGCGV*ITPWTC
Trigger: ACAGGTCCAGGGAGTTATTCAGACACCACATCCATC...ATGTGAAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTTATGCTAGTTGGTACTaGCATGGTAGCAATGTTAGG +
Preference number: 4 (lower is better)
Translates to: PSTSPHGHYEDAASPAPIYASWY*HGSNVR
Trigger: CCTAACATTGCTACCATGGCAGTACCAACTAGCATA...AATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CTATGGGTTGATTTTATCTTACTACTGGAGAGATGCACTGCCTTTGATCACCCTAGTTGCTGGGGACTGTaGAGGCTTCCTGGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: LWVDFILLLERCTAFDHPSCWGL*RLPGEA
Trigger: TGCCTCACCAGGAAGCCTGCACAGTCCCCAGCAACT...AGGGTGATCAAAGGCAGTGCATCTCTCCAGTAGTAAGATAAAATCAACCCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp AGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACAGTTGCTGGGGACTGTaGAGGCTTCCTGGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: RTLFMTERLGTVNMLHWNSCWGL*RLPGEA
Trigger: TGCCTCACCAGGAAGCCTGCACAGTCCCCAGCAACT...GTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp TCAAGACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCAGCTTCCAGTTGCTGGGGACTGTaGAGGCTTCCTGGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: SRHFTYSFFRRRHSLAASSCWGL*RLPGEA
Trigger: TGCCTCACCAGGAAGCCTGCACAGTCCCCAGCAACT...GGAAGCTGCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp TCGACTCTCAAGACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCAGTTGCTGGGGACTGTaGAGGCTTCCTGGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: STLKTLHILFLSTSTFFSSCWGL*RLPGEA
Trigger: TGCCTCACCAGGAAGCCTGCACAGTCCCCAGCAACT...GCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGTCTTGAGAGTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp GAGACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCTGATATATGCTAGTTaGTACTGCCATGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: ETHLQVHMAIMRMLHRLPLIYAS*YCHGSN
Trigger: ATTGCTACCATGGCAGTACCAACTAGCATATATCAG...GGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp AGGGGAGCTGCATTCCAACCCATGGAACAGTATTCCCAATTCACACTCTACAGCTTGGCATGTCACCTGTaGCAGCTTGAACAACAACCT +
Preference number: 4 (lower is better)
Translates to: RGAAFQPMEQYSQFTLYSLACHL*QLEQQP
Trigger: AGGTTGTTGTTCAAGCTGCCACAGGTGACATGCCAA...GCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGTTGGAATGCAGCTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025069.11
ENSMUST00000130455.8
CDS-3UTR CCA 90 bp GCTTCTTGTTCTGAACTTCCAGCACTGCGACTCGACTCTCAAGACACTTCACATCATCACCACACCTTGTaGCAAAGCAGTAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: ASCSELPALRLDSQDTSHHHHTL*QSSSRS
Trigger: GCTCCTACTACTGCTTTGCCACAAGGTGTGGTGATG...ATGTGAAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp GGTAATGTGAGGGGAGCTGCATTCCAACCCATGGAACAGTATTCCCAATTCACACATCACCACACCTTGTaGCAAAGCAGTAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: GNVRGAAFQPMEQYSQFTHHHTL*QSSSRS
Trigger: GCTCCTACTACTGCTTTGCCACAAGGTGTGGTGATG...TGTGAATTGGGAATACTGTTCCATGGGTTGGAATGCAGCTCCCCTCACATTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp TATAAGCTTCTTGTTCTGAACTTCCAGCACTGCGACTCGACTCTCAAGACACTTAGCAGCCATGTGACTTaGGGCAAGGTCAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: YKLLVLNFQHCDSTLKTLSSHVT*GKVSLL
Trigger: GAGGAGACTGACCTTGCCCCAAGTCACATGGCTGCT...AAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGCTTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000131899.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp ATGCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAATCGGATCTGGTAAGTTaGCATGTCACCTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: MLHRLPRLEFTVNKVQIKSDLVS*HVTCGS
Trigger: ACTGCCACAGGTGACATGCCAACTTACCAGATCCGA...TTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000137568.8
ENSMUST00000154470.8
CDS-3UTR TCA 90 bp GGGTTAAGAGACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGACTTCGATCCTGCTGTaGTTCAACTGTTTCCATGGT +
Preference number: 4 (lower is better)
Translates to: GLRDPSTSPHGHYEDAASTSILL*FNCFHG
Trigger: ACCATGGAAACAGTTGAATCACAGCAGGATCGAAGT...CGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTCTTAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000134027.8
ENSMUST00000137568.8
ENSMUST00000148305.2
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp GCTTCTTGTTCTGAACTTCCAGCACTGCGACTCGACTCTCAAGACACTTCACATTGCCCCGTGCTAGTCTaGTATATGCTAGTTGGTACT +
Preference number: 4 (lower is better)
Translates to: ASCSELPALRLDSQDTSHCPVLV*YMLVGT
Trigger: AGTACCAACTAGCATATATCAGACTAGCACGGGGCA...ATGTGAAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp TTCTGGCCCACATCCGTAATCCAAGCACTCAGAAGGCTGAGGCAAGAGAACTGTTGGATTGTTCCACCTTaGGCTATAGCAATGTATTGC +
Preference number: 4 (lower is better)
Translates to: FWPTSVIQALRRLRQENCWIVPP*AIAMYC
Trigger: GCAATACATTGCTATAGCTCAAGGTGGAACAATCCA...ACAGTTCTCTTGCCTCAGCCTTCTGAGTGCTTGGATTACGGATGTGGGCCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR TCA 90 bp AGGATGCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCTGGATTGTTCCACCTTaGGCTATAGCAATGTATTGC +
Preference number: 4 (lower is better)
Translates to: RMLHRLPRLEFTVNKVQIWIVPP*AIAMYC
Trigger: GCAATACATTGCTATAGCTCAAGGTGGAACAATCCA...GATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR TCA 90 bp CTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTTTACAAAGTGACGAATGCCTGGAGTCCCTaGACACCATCAGATCCTGGG +
Preference number: 4 (lower is better)
Translates to: LQLWHPRTAIQYFLYKVTNAWSP*TPSDPG
Trigger: CCCAGGATCTGATGGTGTTCAGGGACTCCAGGCATT...CGTCACTTTGTAAAGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR TCA 90 bp ACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCAGCTTCCCTGAAAATGCCTGGAGTCCCTaGACACCATCAGATCCTGGG +
Preference number: 4 (lower is better)
Translates to: TLHILFLSTSTFFSSFPENAWSP*TPSDPG
Trigger: CCCAGGATCTGATGGTGTTCAGGGACTCCAGGCATT...TTCAGGGAAGCTGCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR TCA 90 bp TCAAGACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCAGCTTCCAATGCCTGGAGTCCCTaGACACCATCAGATCCTGGG +
Preference number: 4 (lower is better)
Translates to: SRHFTYSFFRRRHSLAASNAWSP*TPSDPG
Trigger: CCCAGGATCTGATGGTGTTCAGGGACTCCAGGCATT...GGAAGCTGCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGTCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR GCA 90 bp TTCTGGCCCACATCCGTAATCCAAGCACTCAGAAGGCTGAGGCAAGAGAACTGTGTTACACTTCGATCCTaGTGTGATTCAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: FWPTSVIQALRRLRQENCVTLRS*CDSTVS
Trigger: GGAAACAGTTGAATCACAGCAGGATCGAAGTGTAAC...ACAGTTCTCTTGCCTCAGCCTTCTGAGTGCTTGGATTACGGATGTGGGCCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAAGGGTTAAGAGACCCAGGGAGCCTCTTCCAGTaGCTGATCCAGCTACAGAAA +
Preference number: 4 (lower is better)
Translates to: PNSHSTADCILKQGLRDPGSLFQ*LIQLQK
Trigger: TTTCTGTAGCTGGATCAGGCACTGGAAGAGGCTCCC...TGGGTCTCTTAACCCTTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTAGAATCATCTGTCTCTaGAATTGTTGCTACCTGAAC +
Preference number: 4 (lower is better)
Translates to: PSTSPHGHYEDAASPAPIRIICL*NCCYLN
Trigger: GTTCAGGTAGCAACAATTGCAGAGACAGATGATTCT...AATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CCTAGAGCCCTGCAGTTGTCCTCTAATGAAATGGCCCAGTATTTGCAAGGCTGCTATGCTAGTTGGTACTaGCATGGTAGCAATGTTAGG +
Preference number: 4 (lower is better)
Translates to: PRALQLSSNEMAQYLQGCYASWY*HGSNVR
Trigger: CCTAACATTGCTACCATGGCAGTACCAACTAGCATA...GCAGCCTTGCAAATACTGGGCCATTTCATTAGAGGACAACTGCAGGGCTCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp AGGATGCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCTATGCTAGTTGGTACTaGCATGGTAGCAATGTTAGG +
Preference number: 4 (lower is better)
Translates to: RMLHRLPRLEFTVNKVQIYASWY*HGSNVR
Trigger: CCTAACATTGCTACCATGGCAGTACCAACTAGCATA...GATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp GTATTTGCAAGGCTGCTGATCCAGTGTAGCAATAAATTCATACTTGTGGAACTCAGTTGCTGGGGACTGTaGAGGCTTCCTGGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: VFARLLIQCSNKFILVELSCWGL*RLPGEA
Trigger: TGCCTCACCAGGAAGCCTGCACAGTCCCCAGCAACT...GAGTTCCACAAGTATGAATTTATTGCTACACTGGATCAGCAGCCTTGCAAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp GACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACAAAGTTGCTGGGGACTGTaGAGGCTTCCTGGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: DTIHDRETGNCKYVALEQSCWGL*RLPGEA
Trigger: TGCCTCACCAGGAAGCCTGCACAGTCCCCAGCAACT...TTGTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAAAGTTGCTGGGGACTGTaGAGGCTTCCTGGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: PWNSIPNSHSTADCILKQSCWGL*RLPGEA
Trigger: TGCCTCACCAGGAAGCCTGCACAGTCCCCAGCAACT...TTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp GCAACCAACATGGTTCTATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGGCTTCTTCTGCTAGTTaGTGGGGACTGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: ATNMVLFKTVFNCGTQGQASSAS*WGLCRL
Trigger: AAGCCTGCACAGTCCCCAGCAACTAGCAGAAGAAGC...CTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATAGAACCATGTTGGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAAGGGTTAAGAGACCCAGCTTCTTCTGCTAGTTaGTGGGGACTGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: PNSHSTADCILKQGLRDPASSAS*WGLCRL
Trigger: AAGCCTGCACAGTCCCCAGCAACTAGCAGAAGAAGC...TGGGTCTCTTAACCCTTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp ACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCAGCTTCCCTGAAGCCTCAGCTCCCGCTTaGGAGTTGCTTCTTCTGCTA +
Preference number: 4 (lower is better)
Translates to: TLHILFLSTSTFFSSFPEASAPA*ELLLLL
Trigger: TAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGC...TTCAGGGAAGCTGCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp TGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAAGGGGCCTCAGCTCCCGCTTaGGAGTTGCTTCTTCTGCTA +
Preference number: 4 (lower is better)
Translates to: WNSIPNSHSTADCILKQGASAPA*ELLLLL
Trigger: TAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGC...CCCTTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp TCAAGACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCAGCTTCCGCCTCAGCTCCCGCTTaGGAGTTGCTTCTTCTGCTA +
Preference number: 4 (lower is better)
Translates to: SRHFTYSFFRRRHSLAASASAPA*ELLLLL
Trigger: TAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGC...GGAAGCTGCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGTCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CTATGGGTTGATTTTATCTTACTACTGGAGAGATGCACTGCCTTTGATCACCCTGCCTCAGCTCCCGCTTaGGAGTTGCTTCTTCTGCTA +
Preference number: 4 (lower is better)
Translates to: LWVDFILLLERCTAFDHPASAPA*ELLLLL
Trigger: TAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGC...AGGGTGATCAAAGGCAGTGCATCTCTCCAGTAGTAAGATAAAATCAACCCATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTTTACAAAGTGACGGCCTCAGCTCCCGCTTaGGAGTTGCTTCTTCTGCTA +
Preference number: 4 (lower is better)
Translates to: LQLWHPRTAIQYFLYKVTASAPA*ELLLLL
Trigger: TAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGC...CGTCACTTTGTAAAGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp ACCCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCGCCTCAGCTCCCGCTTaGGAGTTGCTTCTTCTGCTA +
Preference number: 4 (lower is better)
Translates to: THGTVFPIHTLQQTVFLSASAPA*ELLLLL
Trigger: TAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGC...GCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp CCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTCTGATATATGCTAGTTaGTACTGCCATGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: PSTSPHGHYEDAASPAPILIYAS*YCHGSN
Trigger: ATTGCTACCATGGCAGTACCAACTAGCATATATCAG...AATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp CCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTAACACCATCAGATCCTaGGTTAGAAATCTGGATTGT +
Preference number: 4 (lower is better)
Translates to: PSTSPHGHYEDAASPAPINTIRS*VRNLDC
Trigger: ACAATCCAGATTTCTAACCCAGGATCTGATGGTGTT...AATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR CCA 90 bp CCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAAGGGTTAAGAGACCCATCTTCTGCTAGTTGCTaGGGACTGTGCAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: PNSHSTADCILKQGLRDPSSASC*GLCRLP
Trigger: AGGAAGCCTGCACAGTCCCCAGCAACTAGCAGAAGA...TGGGTCTCTTAACCCTTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp ACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCAGCTTCCCTGAAAGCAGCCATGTGACTTaGGGCAAGGTCAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: TLHILFLSTSTFFSSFPESSHVT*GKVSLL
Trigger: GAGGAGACTGACCTTGCCCCAAGTCACATGGCTGCT...TTCAGGGAAGCTGCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000131899.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp TCAAGACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCAGCTTCCAGCAGCCATGTGACTTaGGGCAAGGTCAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SRHFTYSFFRRRHSLAASSSHVT*GKVSLL
Trigger: GAGGAGACTGACCTTGCCCCAAGTCACATGGCTGCT...GGAAGCTGCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGTCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000131899.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp CCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAAGGGTTAAGAGACCCATTGGCATGTCACCTGTaGCAGCAGCCATGTGACTTG +
Preference number: 4 (lower is better)
Translates to: PNSHSTADCILKQGLRDPLACHL*QQPCDL
Trigger: CAAGTCACATGGCTGCTGCCACAGGTGACATGCCAA...TGGGTCTCTTAACCCTTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000131899.8
ENSMUST00000148305.2
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp GCAACCAACATGGTTCTATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGGATGGATGTGGTGTCTaGATAACTCCCTGGACCTGT +
Preference number: 4 (lower is better)
Translates to: ATNMVLFKTVFNCGTQGQDGCGV*ITPWTC
Trigger: ACAGGTCCAGGGAGTTATTCAGACACCACATCCATC...CTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATAGAACCATGTTGGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000025069.11
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp TATAAGCTTCTTGTTCTGAACTTCCAGCACTGCGACTCGACTCTCAAGACACTTGATGGATGTGGTGTCTaGATAACTCCCTGGACCTGT +
Preference number: 4 (lower is better)
Translates to: YKLLVLNFQHCDSTLKTLDGCGV*ITPWTC
Trigger: ACAGGTCCAGGGAGTTATTCAGACACCACATCCATC...AAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGCTTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp GGGTTAAGAGACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGTGGATTGTTCCACCTTaGGCTATAGCAATGTATTGC +
Preference number: 4 (lower is better)
Translates to: GLRDPSTSPHGHYEDAASWIVPP*AIAMYC
Trigger: GCAATACATTGCTATAGCTCAAGGTGGAACAATCCA...CGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTCTTAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR GCA 90 bp GGGTTAAGAGACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGGTTACACTTCGATCCTaGTGTGATTCAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: GLRDPSTSPHGHYEDAASVTLRS*CDSTVS
Trigger: GGAAACAGTTGAATCACAGCAGGATCGAAGTGTAAC...CGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTCTTAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000134027.8
ENSMUST00000137568.8
ENSMUST00000148305.2
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp GCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAACAGTTACACTTCGATCCTaGTGTGATTCAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: AASPAPIRVHSQQGPNQTVTLRS*CDSTVS
Trigger: GGAAACAGTTGAATCACAGCAGGATCGAAGTGTAAC...TGTTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000134027.8
ENSMUST00000137568.8
ENSMUST00000148305.2
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp TGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAAGGGGGGAGCCTCTTCCAGTaGCTGATCCAGCTACAGAAA +
Preference number: 4 (lower is better)
Translates to: WNSIPNSHSTADCILKQGGSLFQ*LIQLQK
Trigger: TTTCTGTAGCTGGATCAGGCACTGGAAGAGGCTCCC...CCCTTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTTGTCTCTGCAATTGTTaGTACCTGAACAGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: PSTSPHGHYEDAASPAPICLCNC*YLNSLY
Trigger: ATACAAACTGTTCAGGTAGCAACAATTGCAGAGACA...AATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CCTAGAGCCCTGCAGTTGTCCTCTAATGAAATGGCCCAGTATTTGCAAGGCTGCAGAATCATCTGTCTCTaGAATTGTTGCTACCTGAAC +
Preference number: 4 (lower is better)
Translates to: PRALQLSSNEMAQYLQGCRIICL*NCCYLN
Trigger: GTTCAGGTAGCAACAATTGCAGAGACAGATGATTCT...GCAGCCTTGCAAATACTGGGCCATTTCATTAGAGGACAACTGCAGGGCTCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000025069.11
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp TTCTGGCCCACATCCGTAATCCAAGCACTCAGAAGGCTGAGGCAAGAGAACTGTAGAATCATCTGTCTCTaGAATTGTTGCTACCTGAAC +
Preference number: 4 (lower is better)
Translates to: FWPTSVIQALRRLRQENCRIICL*NCCYLN
Trigger: GTTCAGGTAGCAACAATTGCAGAGACAGATGATTCT...ACAGTTCTCTTGCCTCAGCCTTCTGAGTGCTTGGATTACGGATGTGGGCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000025069.11
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp TGGTTCTATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGCAATACAATAAGTTGCTGGGGACTGTaGAGGCTTCCTGGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: WFYLKLSSTVAPKDSNTISCWGL*RLPGEA
Trigger: TGCCTCACCAGGAAGCCTGCACAGTCCCCAGCAACT...TATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATAGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp GATTTTATCTTACTACTGGAGAGATGCACTGCCTTTGATCACCCTTTCCTAAAAAGTTGCTGGGGACTGTaGAGGCTTCCTGGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: DFILLLERCTAFDHPFLKSCWGL*RLPGEA
Trigger: TGCCTCACCAGGAAGCCTGCACAGTCCCCAGCAACT...TTTTAGGAAAGGGTGATCAAAGGCAGTGCATCTCTCCAGTAGTAAGATAAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp AAACTGTCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTTTACAAAGTTGCTGGGGACTGTaGAGGCTTCCTGGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: KLSSTVAPKDSNTILSLQSCWGL*RLPGEA
Trigger: TGCCTCACCAGGAAGCCTGCACAGTCCCCAGCAACT...TTGTAAAGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp TCAAGACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCAGCTTCCGCTTCTTCTGCTAGTTaGTGGGGACTGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: SRHFTYSFFRRRHSLAASASSAS*WGLCRL
Trigger: AAGCCTGCACAGTCCCCAGCAACTAGCAGAAGAAGC...GGAAGCTGCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGTCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp ACCCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCGCTTCTTCTGCTAGTTaGTGGGGACTGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: THGTVFPIHTLQQTVFLSASSAS*WGLCRL
Trigger: AAGCCTGCACAGTCCCCAGCAACTAGCAGAAGAAGC...GCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CTATGGGTTGATTTTATCTTACTACTGGAGAGATGCACTGCCTTTGATCACCCTGCTTCTTCTGCTAGTTaGTGGGGACTGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: LWVDFILLLERCTAFDHPASSAS*WGLCRL
Trigger: AAGCCTGCACAGTCCCCAGCAACTAGCAGAAGAAGC...AGGGTGATCAAAGGCAGTGCATCTCTCCAGTAGTAAGATAAAATCAACCCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTTTACAAAGTGACGGCTTCTTCTGCTAGTTaGTGGGGACTGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: LQLWHPRTAIQYFLYKVTASSAS*WGLCRL
Trigger: AAGCCTGCACAGTCCCCAGCAACTAGCAGAAGAAGC...CGTCACTTTGTAAAGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp TCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTTTACAAAGTGACGCCTCAGCTCCCGCTTaGGAGTTGCTTCTTCTGCTA +
Preference number: 4 (lower is better)
Translates to: SSTVAPKDSNTILSLQSDASAPA*ELLLLL
Trigger: TAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGC...GTCACTTTGTAAAGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp TTGCATAGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACGCCTCAGCTCCCGCTTaGGAGTTGCTTCTTCTGCTA +
Preference number: 4 (lower is better)
Translates to: LHRTLFMTERLGTVNMLHASAPA*ELLLLL
Trigger: TAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGC...GTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCTATGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp AACCCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGGCCTCAGCTCCCGCTTaGGAGTTGCTTCTTCTGCTA +
Preference number: 4 (lower is better)
Translates to: NPWNSIPNSHSTADCILKASAPA*ELLLLL
Trigger: TAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGC...CTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAAGCCTCAGCTCCCGCTTaGGAGTTGCTTCTTCTGCTA +
Preference number: 4 (lower is better)
Translates to: PWNSIPNSHSTADCILKQASAPA*ELLLLL
Trigger: TAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGC...TTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp GACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACAAGCCTCAGCTCCCGCTTaGGAGTTGCTTCTTCTGCTA +
Preference number: 4 (lower is better)
Translates to: DTIHDRETGNCKYVALEQASAPA*ELLLLL
Trigger: TAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGC...TTGTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAACACAGAATCATCTGTCTCTaGAATTGTTGCTACCTGAGC +
Preference number: 4 (lower is better)
Translates to: LHRLPRLEFTVNKVQIKHRIICL*NCCYLS
Trigger: GCTCAGGTAGCAACAATTGCAGAGACAGATGATTCT...GTGTTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000082141.12
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
CDS-3UTR CCA 90 bp GCTTCTTGTTCTGAACTTCCAGCACTGCGACTCGACTCTCAAGACACTTCACATTGGACCTGTACAGTTTaGCCTGAAGGTAACTGTACT +
Preference number: 4 (lower is better)
Translates to: ASCSELPALRLDSQDTSHWTCTV*PEGNCT
Trigger: AGTACAGTTACCTTCAGGCCAAACTGTACAGGTCCA...ATGTGAAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp GGTAATGTGAGGGGAGCTGCATTCCAACCCATGGAACAGTATTCCCAATTCACATGGACCTGTACAGTTTaGCCTGAAGGTAACTGTACT +
Preference number: 4 (lower is better)
Translates to: GNVRGAAFQPMEQYSQFTWTCTV*PEGNCT
Trigger: AGTACAGTTACCTTCAGGCCAAACTGTACAGGTCCA...TGTGAATTGGGAATACTGTTCCATGGGTTGGAATGCAGCTCCCCTCACATTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp ACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCAGCTTCCCTGAATCGGATCTGGTAAGTTaGCATGTCACCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: TLHILFLSTSTFFSSFPESDLVS*HVTCGS
Trigger: GCTGCCACAGGTGACATGCCAACTTACCAGATCCGA...TTCAGGGAAGCTGCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp TGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAAGGGTCGGATCTGGTAAGTTaGCATGTCACCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: WNSIPNSHSTADCILKQGSDLVS*HVTCGS
Trigger: GCTGCCACAGGTGACATGCCAACTTACCAGATCCGA...CCCTTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp CCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAAGGGTTAAGAGACCCACATCACCACACCTTGTaGCAAAGCAGTAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: PNSHSTADCILKQGLRDPHHHTL*QSSSRS
Trigger: GCTCCTACTACTGCTTTGCCACAAGGTGTGGTGATG...TGGGTCTCTTAACCCTTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp ACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCAGCTTCCCTGAATCTTCTGCTAGTTGCTaGGGACTGTGCAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: TLHILFLSTSTFFSSFPESSASC*GLCRLP
Trigger: AGGAAGCCTGCACAGTCCCCAGCAACTAGCAGAAGA...TTCAGGGAAGCTGCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp GTATTTGCAAGGCTGCTGATCCAGTGTAGCAATAAATTCATACTTGTGGAACTCAGCAGCCATGTGACTTaGGGCAAGGTCAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: VFARLLIQCSNKFILVELSSHVT*GKVSLL
Trigger: GAGGAGACTGACCTTGCCCCAAGTCACATGGCTGCT...GAGTTCCACAAGTATGAATTTATTGCTACACTGGATCAGCAGCCTTGCAAATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp TCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTTTACAAAGTGACAGCAGCCATGTGACTTaGGGCAAGGTCAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SSTVAPKDSNTILSLQSDSSHVT*GKVSLL
Trigger: GAGGAGACTGACCTTGCCCCAAGTCACATGGCTGCT...GTCACTTTGTAAAGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp CTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTTTACAAAGTGACGTTGGCATGTCACCTGTaGCAGCAGCCATGTGACTTG +
Preference number: 4 (lower is better)
Translates to: LQLWHPRTAIQYFLYKVTLACHL*QQPCDL
Trigger: CAAGTCACATGGCTGCTGCCACAGGTGACATGCCAA...CGTCACTTTGTAAAGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp AACCCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGTTGGCATGTCACCTGTaGCAGTGTATTGCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: NPWNSIPNSHSTADCILKLACHL*QCIAPC
Trigger: GCACGGGGCAATACACTGCCACAGGTGACATGCCAA...CTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000137568.8
ENSMUST00000154470.8
CDS-3UTR CCA 90 bp CCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAATTGGCATGTCACCTGTaGCAGTGTATTGCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: PWNSIPNSHSTADCILKQLACHL*QCIAPC
Trigger: GCACGGGGCAATACACTGCCACAGGTGACATGCCAA...TTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000137568.8
ENSMUST00000154470.8
CDS-3UTR TCA 90 bp AGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACGATGGATGTGGTGTCTaGATAACTCCCTGGACCTGT +
Preference number: 4 (lower is better)
Translates to: RTLFMTERLGTVNMLHWNDGCGV*ITPWTC
Trigger: ACAGGTCCAGGGAGTTATTCAGACACCACATCCATC...GTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp AGGGGAGCTGCATTCCAACCCATGGAACAGTATTCCCAATTCACACTCTACAGCCGAATCAATTACTTCTaGGTCTGCAGAATCATCTGT +
Preference number: 4 (lower is better)
Translates to: RGAAFQPMEQYSQFTLYSRINYF*VCRIIC
Trigger: ACAGATGATTCTGCAGACTCAGAAGTAATTGATTCG...GCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGTTGGAATGCAGCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp TGGTTCTATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGCAATACAATAAATGCCTGGAGTCCCTaGACACCATCAGATCCTGGG +
Preference number: 4 (lower is better)
Translates to: WFYLKLSSTVAPKDSNTINAWSP*TPSDPG
Trigger: CCCAGGATCTGATGGTGTTCAGGGACTCCAGGCATT...TATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATAGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR GCA 90 bp TTCTGGCCCACATCCGTAATCCAAGCACTCAGAAGGCTGAGGCAAGAGAACTGTGTTTCCATGGTCATTTaGCTTACATTTGTCCTCATA +
Preference number: 4 (lower is better)
Translates to: FWPTSVIQALRRLRQENCVSMVI*LTFVLI
Trigger: TATGAGGACAAATGTAAGGCAAATGACCATGGAAAC...ACAGTTCTCTTGCCTCAGCCTTCTGAGTGCTTGGATTACGGATGTGGGCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp GACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACAAGGGAGCCTCTTCCAGTaGCTGATCCAGCTACAGAAA +
Preference number: 4 (lower is better)
Translates to: DTIHDRETGNCKYVALEQGSLFQ*LIQLQK
Trigger: TTTCTGTAGCTGGATCAGGCACTGGAAGAGGCTCCC...TTGTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAAGGGAGCCTCTTCCAGTaGCTGATCCAGCTACAGAAA +
Preference number: 4 (lower is better)
Translates to: PWNSIPNSHSTADCILKQGSLFQ*LIQLQK
Trigger: TTTCTGTAGCTGGATCAGGCACTGGAAGAGGCTCCC...TTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CCTAGAGCCCTGCAGTTGTCCTCTAATGAAATGGCCCAGTATTTGCAAGGCTGCTGTCTCTGCAATTGTTaGTACCTGAACAGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: PRALQLSSNEMAQYLQGCCLCNC*YLNSLY
Trigger: ATACAAACTGTTCAGGTAGCAACAATTGCAGAGACA...GCAGCCTTGCAAATACTGGGCCATTTCATTAGAGGACAACTGCAGGGCTCTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000025069.11
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp GGGTTAAGAGACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGAGAATCATCTGTCTCTaGAATTGTTGCTACCTGAAC +
Preference number: 4 (lower is better)
Translates to: GLRDPSTSPHGHYEDAASRIICL*NCCYLN
Trigger: GTTCAGGTAGCAACAATTGCAGAGACAGATGATTCT...CGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTCTTAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp AGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACCCTGGGACAAAGAACTaGTGTGTACCATCGGCTGAT +
Preference number: 4 (lower is better)
Translates to: RTLFMTERLGTVNMLHWNPGTKN*CVPSAD
Trigger: ATCAGCCGATGGTACACAGCAGTTCTTTGTCCCAGG...GTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR GCA 90 bp CTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTTTACAAAGTGACGCCTGGGACAAAGAACTaGTGTGTACCATCGGCTGAT +
Preference number: 4 (lower is better)
Translates to: LQLWHPRTAIQYFLYKVTPGTKN*CVPSAD
Trigger: ATCAGCCGATGGTACACAGCAGTTCTTTGTCCCAGG...CGTCACTTTGTAAAGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR GCA 90 bp TCGACTCTCAAGACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCCCTGGGACAAAGAACTaGTGTGTACCATCGGCTGAT +
Preference number: 4 (lower is better)
Translates to: STLKTLHILFLSTSTFFSPGTKN*CVPSAD
Trigger: ATCAGCCGATGGTACACAGCAGTTCTTTGTCCCAGG...GCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGTCTTGAGAGTCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR GCA 90 bp ACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCAGCTTCCCTGAACCTGGGACAAAGAACTaGTGTGTACCATCGGCTGAT +
Preference number: 4 (lower is better)
Translates to: TLHILFLSTSTFFSSFPEPGTKN*CVPSAD
Trigger: ATCAGCCGATGGTACACAGCAGTTCTTTGTCCCAGG...TTCAGGGAAGCTGCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR GCA 90 bp TGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAAGGGGAACAACAACCTGGCTaGCTGGGACAAAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: WNSIPNSHSTADCILKQGEQQPG*LGQRTA
Trigger: AGCAGTTCTTTGTCCCAGGCAGCCAGGTTGTTGTTC...CCCTTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR GCA 90 bp AGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACGAACAACAACCTGGCTaGCTGGGACAAAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: RTLFMTERLGTVNMLHWNEQQPG*LGQRTA
Trigger: AGCAGTTCTTTGTCCCAGGCAGCCAGGTTGTTGTTC...GTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR GCA 90 bp TGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTAGTTGCTGGGGACTGTaGAGGCTTCCTGGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: CRLYIVLHSKATVHAVISSCWGL*RLPGEA
Trigger: TGCCTCACCAGGAAGCCTGCACAGTCCCCAGCAACT...ACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151084.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCAGTTGCTGGGGACTGTaGAGGCTTCCTGGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: PAIYCIAFKSNCTCCNQFSCWGL*RLPGEA
Trigger: TGCCTCACCAGGAAGCCTGCACAGTCCCCAGCAACT...GAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151084.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAAGCTTCTTCTGCTAGTTaGTGGGGACTGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: PWNSIPNSHSTADCILKQASSAS*WGLCRL
Trigger: AAGCCTGCACAGTCCCCAGCAACTAGCAGAAGAAGC...TTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp TTGCATAGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACGCTTCTTCTGCTAGTTaGTGGGGACTGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: LHRTLFMTERLGTVNMLHASSAS*WGLCRL
Trigger: AAGCCTGCACAGTCCCCAGCAACTAGCAGAAGAAGC...GTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCTATGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp AACCCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGGCTTCTTCTGCTAGTTaGTGGGGACTGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: NPWNSIPNSHSTADCILKASSAS*WGLCRL
Trigger: AAGCCTGCACAGTCCCCAGCAACTAGCAGAAGAAGC...CTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp AGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACCTGAACTTCCAGCACTaGGACTCGACTCTCAAGACA +
Preference number: 4 (lower is better)
Translates to: RTLFMTERLGTVNMLHWNLNFQH*DSTLKT
Trigger: TGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAG...GTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR GCA 90 bp CTATGGGTTGATTTTATCTTACTACTGGAGAGATGCACTGCCTTTGATCACCCTCTGAACTTCCAGCACTaGGACTCGACTCTCAAGACA +
Preference number: 4 (lower is better)
Translates to: LWVDFILLLERCTAFDHPLNFQH*DSTLKT
Trigger: TGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAG...AGGGTGATCAAAGGCAGTGCATCTCTCCAGTAGTAAGATAAAATCAACCCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR CCA 90 bp AGGGGAGCTGCATTCCAACCCATGGAACAGTATTCCCAATTCACACTCTACAGCTTTCTTCTTCAATCTTaGGAATACCAGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: RGAAFQPMEQYSQFTLYSFLLQS*EYQAHQ
Trigger: CTGATGTGCCTGGTATTCCCAAGATTGAAGAAGAAA...GCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGTTGGAATGCAGCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp GCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAACATTTCTTCTTCAATCTTaGGAATACCAGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: AASPAPIRVHSQQGPNQTFLLQS*EYQAHQ
Trigger: CTGATGTGCCTGGTATTCCCAAGATTGAAGAAGAAA...TGTTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp CTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAACACTTTCTTCTTCAATCTTaGGAATACCAGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: LHRLPRLEFTVNKVQIKHFLLQS*EYQAHQ
Trigger: CTGATGTGCCTGGTATTCCCAAGATTGAAGAAGAAA...GTGTTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp GGGTTAAGAGACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCTGATATATGCTAGTTaGTACTGCCATGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: GLRDPSTSPHGHYEDAASLIYAS*YCHGSN
Trigger: ATTGCTACCATGGCAGTACCAACTAGCATATATCAG...CGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTCTTAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp AGGGGAGCTGCATTCCAACCCATGGAACAGTATTCCCAATTCACACTCTACAGCCTGATATATGCTAGTTaGTACTGCCATGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: RGAAFQPMEQYSQFTLYSLIYAS*YCHGSN
Trigger: ATTGCTACCATGGCAGTACCAACTAGCATATATCAG...GCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGTTGGAATGCAGCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp ACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCAGCTTCCCTGAAAACAACCTGGCTGCCTaGGACAAAGAACTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: TLHILFLSTSTFFSSFPENNLAA*DKELLC
Trigger: ACACAGCAGTTCTTTGTCCCAGGCAGCCAGGTTGTT...TTCAGGGAAGCTGCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR CCA 90 bp CCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAATCGGATCTGGTAAGTTaGCATGTCACCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PWNSIPNSHSTADCILKQSDLVS*HVTCGS
Trigger: GCTGCCACAGGTGACATGCCAACTTACCAGATCCGA...TTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp TTGCATAGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTCTTCTGCTAGTTGCTaGGGACTGTGCAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LHRTLFMTERLGTVNMLHSSASC*GLCRLP
Trigger: AGGAAGCCTGCACAGTCCCCAGCAACTAGCAGAAGA...GTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCTATGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp TCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTTTACAAAGTGACTCTTCTGCTAGTTGCTaGGGACTGTGCAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SSTVAPKDSNTILSLQSDSSASC*GLCRLP
Trigger: AGGAAGCCTGCACAGTCCCCAGCAACTAGCAGAAGA...GTCACTTTGTAAAGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp ATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACAAGTCTTAAGCAGCCATGTGACTTaGGGCAAGGTCAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: IHDRETGNCKYVALEQVLSSHVT*GKVSLL
Trigger: GAGGAGACTGACCTTGCCCCAAGTCACATGGCTGCT...TAAGACTTGTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp CCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAATTGGCATGTCACCTGTaGCAGCAGCCATGTGACTTG +
Preference number: 4 (lower is better)
Translates to: PWNSIPNSHSTADCILKQLACHL*QQPCDL
Trigger: CAAGTCACATGGCTGCTGCCACAGGTGACATGCCAA...TTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000131899.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp TGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAAGGGTCGGATCTGGTAAGTTaGCATGTCACCTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: WNSIPNSHSTADCILKQGSDLVS*HVTCGS
Trigger: ACTGCCACAGGTGACATGCCAACTTACCAGATCCGA...CCCTTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137568.8
ENSMUST00000154470.8
CDS-3UTR TCA 90 bp TCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTTTACAAAGTGACGATGGATGTGGTGTCTaGATAACTCCCTGGACCTGT +
Preference number: 4 (lower is better)
Translates to: SSTVAPKDSNTILSLQSDDGCGV*ITPWTC
Trigger: ACAGGTCCAGGGAGTTATTCAGACACCACATCCATC...GTCACTTTGTAAAGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000025069.11
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp GCTTCTTGTTCTGAACTTCCAGCACTGCGACTCGACTCTCAAGACACTTCACATCGAATCAATTACTTCTaGGTCTGCAGAATCATCTGT +
Preference number: 4 (lower is better)
Translates to: ASCSELPALRLDSQDTSHRINYF*VCRIIC
Trigger: ACAGATGATTCTGCAGACTCAGAAGTAATTGATTCG...ATGTGAAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp ATGCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAACGAATCAATTACTTCTaGGTCTGCAGAATCATCTGT +
Preference number: 4 (lower is better)
Translates to: MLHRLPRLEFTVNKVQIKRINYF*VCRIIC
Trigger: ACAGATGATTCTGCAGACTCAGAAGTAATTGATTCG...TTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp AGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACTGCCCCGTGCTAGTCTaGTATATGCTAGTTGGTACT +
Preference number: 4 (lower is better)
Translates to: RTLFMTERLGTVNMLHWNCPVLV*YMLVGT
Trigger: AGTACCAACTAGCATATATCAGACTAGCACGGGGCA...GTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp TCGACTCTCAAGACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCTGCCCCGTGCTAGTCTaGTATATGCTAGTTGGTACT +
Preference number: 4 (lower is better)
Translates to: STLKTLHILFLSTSTFFSCPVLV*YMLVGT
Trigger: AGTACCAACTAGCATATATCAGACTAGCACGGGGCA...GCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGTCTTGAGAGTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp TGGACACAGTATATAACATTACACACATCCCCAAGGACCCAAGCAGTTATTTCCTGCCCCGTGCTAGTCTaGTATATGCTAGTTGGTACT +
Preference number: 4 (lower is better)
Translates to: WTQYITLHTSPRTQAVISCPVLV*YMLVGT
Trigger: AGTACCAACTAGCATATATCAGACTAGCACGGGGCA...GGAAATAACTGCTTGGGTCCTTGGGGATGTGTGTAATGTTATATACTGTGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149803.8
CDS-3UTR TCA 90 bp CTATGGGTTGATTTTATCTTACTACTGGAGAGATGCACTGCCTTTGATCACCCTTGCCCCGTGCTAGTCTaGTATATGCTAGTTGGTACT +
Preference number: 4 (lower is better)
Translates to: LWVDFILLLERCTAFDHPCPVLV*YMLVGT
Trigger: AGTACCAACTAGCATATATCAGACTAGCACGGGGCA...AGGGTGATCAAAGGCAGTGCATCTCTCCAGTAGTAAGATAAAATCAACCCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp TCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTTTACAAAGTGACTCAGTCTCCTCATCTTaGACAACAACCTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SSTVAPKDSNTILSLQSDSVSSS*TTTWLP
Trigger: AGGCAGCCAGGTTGTTGTTCAAGATGAGGAGACTGA...GTCACTTTGTAAAGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
CDS-3UTR TCA 90 bp TCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTTTACAAAGTGACGATTCAGTCTCCTCATCTTaGACAACAACCTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: STVAPKDSNTILSLQSDDSVSSS*TTTWLP
Trigger: AGGCAGCCAGGTTGTTGTTCAAGATGAGGAGACTGA...ATCGTCACTTTGTAAAGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
CDS-3UTR GCA 90 bp CTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAACACGTTTCCATGGTCATTTaGCTTACATTTGTCCTCATA +
Preference number: 4 (lower is better)
Translates to: LHRLPRLEFTVNKVQIKHVSMVI*LTFVLI
Trigger: TATGAGGACAAATGTAAGGCAAATGACCATGGAAAC...GTGTTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000134027.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp TGGTTCTATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGCAATACAATAGGGAGCCTCTTCCAGTaGCTGATCCAGCTACAGAAA +
Preference number: 4 (lower is better)
Translates to: WFYLKLSSTVAPKDSNTIGSLFQ*LIQLQK
Trigger: TTTCTGTAGCTGGATCAGGCACTGGAAGAGGCTCCC...TATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATAGAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000025069.11
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAAGAACAACAACCTGGCTaGCTGGGACAAAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: PWNSIPNSHSTADCILKQEQQPG*LGQRTA
Trigger: AGCAGTTCTTTGTCCCAGGCAGCCAGGTTGTTGTTC...TTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR GCA 90 bp GATTTTATCTTACTACTGGAGAGATGCACTGCCTTTGATCACCCTTTCCTAAAAGCTTCTTCTGCTAGTTaGTGGGGACTGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: DFILLLERCTAFDHPFLKASSAS*WGLCRL
Trigger: AAGCCTGCACAGTCCCCAGCAACTAGCAGAAGAAGC...TTTTAGGAAAGGGTGATCAAAGGCAGTGCATCTCTCCAGTAGTAAGATAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp GTTCTATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTGCTTCTTCTGCTAGTTaGTGGGGACTGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: VLFKTVFNCGTQGQQYNTASSAS*WGLCRL
Trigger: AAGCCTGCACAGTCCCCAGCAACTAGCAGAAGAAGC...AGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp TATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTGCCTCAGCTCCCGCTTaGGAGTTGCTTCTTCTGCTA +
Preference number: 4 (lower is better)
Translates to: YLKLSSTVAPKDSNTILSASAPA*ELLLLL
Trigger: TAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGC...AGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp GCAACCAACATGGTTCTATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGTGGACCTGTACAGTTTaGCCTGAAGGTAACTGTACT +
Preference number: 4 (lower is better)
Translates to: ATNMVLFKTVFNCGTQGQWTCTV*PEGNCT
Trigger: AGTACAGTTACCTTCAGGCCAAACTGTACAGGTCCA...CTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATAGAACCATGTTGGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000025069.11
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp CCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAAAACAACCTGGCTGCCTaGGACAAAGAACTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: PWNSIPNSHSTADCILKQNNLAA*DKELLC
Trigger: ACACAGCAGTTCTTTGTCCCAGGCAGCCAGGTTGTT...TTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR CCA 90 bp TCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTTTACAAAGTGACAACAACCTGGCTGCCTaGGACAAAGAACTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SSTVAPKDSNTILSLQSDNNLAA*DKELLC
Trigger: ACACAGCAGTTCTTTGTCCCAGGCAGCCAGGTTGTT...GTCACTTTGTAAAGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR CCA 90 bp CTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTTTACAAAGTGACGTTGGCATGTCACCTGTaGCAGCTTGAACAACAACCT +
Preference number: 4 (lower is better)
Translates to: LQLWHPRTAIQYFLYKVTLACHL*QLEQQP
Trigger: AGGTTGTTGTTCAAGCTGCCACAGGTGACATGCCAA...CGTCACTTTGTAAAGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025069.11
ENSMUST00000151311.8
CDS-3UTR CCA 90 bp GTATCTCTATGGGTTGATTTTATCTTACTACTGGAGAGATGCACTGCCTTTGATTCGGATCTGGTAAGTTaGCATGTCACCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: VSLWVDFILLLERCTAFDSDLVS*HVTCGS
Trigger: GCTGCCACAGGTGACATGCCAACTTACCAGATCCGA...ATCAAAGGCAGTGCATCTCTCCAGTAGTAAGATAAAATCAACCCATAGAGATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp TGGTTCTATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGCAATACAATATCGGATCTGGTAAGTTaGCATGTCACCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: WFYLKLSSTVAPKDSNTISDLVS*HVTCGS
Trigger: GCTGCCACAGGTGACATGCCAACTTACCAGATCCGA...TATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATAGAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp GACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACAACATCACCACACCTTGTaGCAAAGCAGTAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: DTIHDRETGNCKYVALEQHHHTL*QSSSRS
Trigger: GCTCCTACTACTGCTTTGCCACAAGGTGTGGTGATG...TTGTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp TCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTTTACAAAGTGACCATCACCACACCTTGTaGCAAAGCAGTAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: SSTVAPKDSNTILSLQSDHHHTL*QSSSRS
Trigger: GCTCCTACTACTGCTTTGCCACAAGGTGTGGTGATG...GTCACTTTGTAAAGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp TTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGAGCAGCCATGTGACTTaGGGCAAGGTCAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LPAIYCIAFKSNCTCCNQSSHVT*GKVSLL
Trigger: GAGGAGACTGACCTTGCCCCAAGTCACATGGCTGCT...CTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000150235.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp AACCCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGTGCCCCGTGCTAGTCTaGTATATGCTAGTTGGTACT +
Preference number: 4 (lower is better)
Translates to: NPWNSIPNSHSTADCILKCPVLV*YMLVGT
Trigger: AGTACCAACTAGCATATATCAGACTAGCACGGGGCA...CTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp CGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCAAATGCCTGGAGTCCCTaGACACCATCAGATCCTGGG +
Preference number: 4 (lower is better)
Translates to: RLYIVLHSKATVHAVISSNAWSP*TPSDPG
Trigger: CCCAGGATCTGATGGTGTTCAGGGACTCCAGGCATT...TGAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR TCA 90 bp ATAATTCTTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGAATGCCTGGAGTCCCTaGACACCATCAGATCCTGGG +
Preference number: 4 (lower is better)
Translates to: IILAGYILYCIQKQLYMLNAWSP*TPSDPG
Trigger: CCCAGGATCTGATGGTGTTCAGGGACTCCAGGCATT...CAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAAGAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR TCA 90 bp GATTTTATCTTACTACTGGAGAGATGCACTGCCTTTGATCACCCTTTCCTAAAATCAGTCTCCTCATCTTaGACAACAACCTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: DFILLLERCTAFDHPFLKSVSSS*TTTWLP
Trigger: AGGCAGCCAGGTTGTTGTTCAAGATGAGGAGACTGA...TTTTAGGAAAGGGTGATCAAAGGCAGTGCATCTCTCCAGTAGTAAGATAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
CDS-3UTR GCA 90 bp CCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAAGGGTTAAGAGACCCAGTTACACTTCGATCCTaGTGTGATTCAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: PNSHSTADCILKQGLRDPVTLRS*CDSTVS
Trigger: GGAAACAGTTGAATCACAGCAGGATCGAAGTGTAAC...TGGGTCTCTTAACCCTTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000134027.8
ENSMUST00000137568.8
ENSMUST00000148305.2
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp TGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTGGGAGCCTCTTCCAGTaGCTGATCCAGCTACAGAAA +
Preference number: 4 (lower is better)
Translates to: CRLYIVLHSKATVHAVISGSLFQ*LIQLQK
Trigger: TTTCTGTAGCTGGATCAGGCACTGGAAGAGGCTCCC...ACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000122958.8
ENSMUST00000131899.8
ENSMUST00000150235.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp TATAAGCTTCTTGTTCTGAACTTCCAGCACTGCGACTCGACTCTCAAGACACTTTATGCTAGTTGGTACTaGCATGGTAGCAATGTTAGG +
Preference number: 4 (lower is better)
Translates to: YKLLVLNFQHCDSTLKTLYASWY*HGSNVR
Trigger: CCTAACATTGCTACCATGGCAGTACCAACTAGCATA...AAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGCTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp GTTCTATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTGAACAACAACCTGGCTaGCTGGGACAAAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: VLFKTVFNCGTQGQQYNTEQQPG*LGQRTA
Trigger: AGCAGTTCTTTGTCCCAGGCAGCCAGGTTGTTGTTC...AGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR GCA 90 bp GCCATAATTCTTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGGCTTCTTCTGCTAGTTaGTGGGGACTGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: AIILAGYILYCIQKQLYMASSAS*WGLCRL
Trigger: AAGCCTGCACAGTCCCCAGCAACTAGCAGAAGAAGC...CATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAAGAATTATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000131899.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151084.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCAGCCTCAGCTCCCGCTTaGGAGTTGCTTCTTCTGCTA +
Preference number: 4 (lower is better)
Translates to: RLYIVLHSKATVHAVISSASAPA*ELLLLL
Trigger: TAGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGC...TGAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151084.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp GATTTTATCTTACTACTGGAGAGATGCACTGCCTTTGATCACCCTTTCCTAAAAAACAACCTGGCTGCCTaGGACAAAGAACTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: DFILLLERCTAFDHPFLKNNLAA*DKELLC
Trigger: ACACAGCAGTTCTTTGTCCCAGGCAGCCAGGTTGTT...TTTTAGGAAAGGGTGATCAAAGGCAGTGCATCTCTCCAGTAGTAAGATAAAATC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR CCA 90 bp TTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTCGGATCTGGTAAGTTaGCATGTCACCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LPAIYCIAFKSNCTCCNQSDLVS*HVTCGS
Trigger: GCTGCCACAGGTGACATGCCAACTTACCAGATCCGA...CTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151084.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp TTATTGCATAGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGTCGGATCTGGTAAGTTaGCATGTCACCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LLHRTLFMTERLGTVNMLSDLVS*HVTCGS
Trigger: GCTGCCACAGGTGACATGCCAACTTACCAGATCCGA...CAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCTATGCAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp CTGCTGATCCAGTGTAGCAATAAATTCATACTTGTGGAACTCATTCCAGATAATTCGGATCTGGTAAGTTaGCATGTCACCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LLIQCSNKFILVELIPDNSDLVS*HVTCGS
Trigger: GCTGCCACAGGTGACATGCCAACTTACCAGATCCGA...ATTATCTGGAATGAGTTCCACAAGTATGAATTTATTGCTACACTGGATCAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp ATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACAAGTCTTACATCACCACACCTTGTaGCAAAGCAGTAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: IHDRETGNCKYVALEQVLHHHTL*QSSSRS
Trigger: GCTCCTACTACTGCTTTGCCACAAGGTGTGGTGATG...TAAGACTTGTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp TGGTTCTATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGCAATACAATACATCACCACACCTTGTaGCAAAGCAGTAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: WFYLKLSSTVAPKDSNTIHHHTL*QSSSRS
Trigger: GCTCCTACTACTGCTTTGCCACAAGGTGTGGTGATG...TATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATAGAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp CCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCTCTTCTGCTAGTTGCTaGGGACTGTGCAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: PAIYCIAFKSNCTCCNQFSSASC*GLCRLP
Trigger: AGGAAGCCTGCACAGTCCCCAGCAACTAGCAGAAGA...GAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151084.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp GCCATAATTCTTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGTCTTCTGCTAGTTGCTaGGGACTGTGCAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: AIILAGYILYCIQKQLYMSSASC*GLCRLP
Trigger: AGGAAGCCTGCACAGTCCCCAGCAACTAGCAGAAGA...CATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAAGAATTATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000131899.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151084.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp TTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTCTTCTGCTAGTTGCTaGGGACTGTGCAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LPAIYCIAFKSNCTCCNQSSASC*GLCRLP
Trigger: AGGAAGCCTGCACAGTCCCCAGCAACTAGCAGAAGA...CTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151084.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp CCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCTTGGCATGTCACCTGTaGCAGCAGCCATGTGACTTG +
Preference number: 4 (lower is better)
Translates to: PAIYCIAFKSNCTCCNQFLACHL*QQPCDL
Trigger: CAAGTCACATGGCTGCTGCCACAGGTGACATGCCAA...GAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000150235.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp TTGCATAGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACACTTCGATCCTGCTGTaGTTCAACTGTTTCCATGGT +
Preference number: 4 (lower is better)
Translates to: LHRTLFMTERLGTVNMLHTSILL*FNCFHG
Trigger: ACCATGGAAACAGTTGAATCACAGCAGGATCGAAGT...GTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCTATGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp GACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACAAACTTCGATCCTGCTGTaGTTCAACTGTTTCCATGGT +
Preference number: 4 (lower is better)
Translates to: DTIHDRETGNCKYVALEQTSILL*FNCFHG
Trigger: ACCATGGAAACAGTTGAATCACAGCAGGATCGAAGT...TTGTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp GCAACCAACATGGTTCTATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGCGAATCAATTACTTCTaGGTCTGCAGAATCATCTGT +
Preference number: 4 (lower is better)
Translates to: ATNMVLFKTVFNCGTQGQRINYF*VCRIIC
Trigger: ACAGATGATTCTGCAGACTCAGAAGTAATTGATTCG...CTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATAGAACCATGTTGGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp ATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACAAGTCTTATGCCCCGTGCTAGTCTaGTATATGCTAGTTGGTACT +
Preference number: 4 (lower is better)
Translates to: IHDRETGNCKYVALEQVLCPVLV*YMLVGT
Trigger: AGTACCAACTAGCATATATCAGACTAGCACGGGGCA...TAAGACTTGTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp CTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTTTACAAAGTGACGTGGATTGTTCCACCTTaGGCTATAGCAATGTATTGC +
Preference number: 4 (lower is better)
Translates to: LQLWHPRTAIQYFLYKVTWIVPP*AIAMYC
Trigger: GCAATACATTGCTATAGCTCAAGGTGGAACAATCCA...CGTCACTTTGTAAAGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR TCA 90 bp AGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACTGGATTGTTCCACCTTaGGCTATAGCAATGTATTGC +
Preference number: 4 (lower is better)
Translates to: RTLFMTERLGTVNMLHWNWIVPP*AIAMYC
Trigger: GCAATACATTGCTATAGCTCAAGGTGGAACAATCCA...GTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR TCA 90 bp TCGACTCTCAAGACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCTGGATTGTTCCACCTTaGGCTATAGCAATGTATTGC +
Preference number: 4 (lower is better)
Translates to: STLKTLHILFLSTSTFFSWIVPP*AIAMYC
Trigger: GCAATACATTGCTATAGCTCAAGGTGGAACAATCCA...GCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGTCTTGAGAGTCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR TCA 90 bp GACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACAAATAAGCTTCTTGTTCTaGACTTCCAGCACTGCGACT +
Preference number: 4 (lower is better)
Translates to: DTIHDRETGNCKYVALEQISFLF*TSSTAT
Trigger: AGTCGCAGTGCTGGAAGTTCAGAACAAGAAGCTTAT...TTGTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR GCA 90 bp ACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCAGCTTCCCTGAAGTTACACTTCGATCCTaGTGTGATTCAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: TLHILFLSTSTFFSSFPEVTLRS*CDSTVS
Trigger: GGAAACAGTTGAATCACAGCAGGATCGAAGTGTAAC...TTCAGGGAAGCTGCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000134027.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp TCGACTCTCAAGACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCGTTACACTTCGATCCTaGTGTGATTCAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: STLKTLHILFLSTSTFFSVTLRS*CDSTVS
Trigger: GGAAACAGTTGAATCACAGCAGGATCGAAGTGTAAC...GCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGTCTTGAGAGTCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000134027.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp AGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACGTTACACTTCGATCCTaGTGTGATTCAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: RTLFMTERLGTVNMLHWNVTLRS*CDSTVS
Trigger: GGAAACAGTTGAATCACAGCAGGATCGAAGTGTAAC...GTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAAGGGTTAAGAGACCCAAGAATCATCTGTCTCTaGAATTGTTGCTACCTGAAC +
Preference number: 4 (lower is better)
Translates to: PNSHSTADCILKQGLRDPRIICL*NCCYLN
Trigger: GTTCAGGTAGCAACAATTGCAGAGACAGATGATTCT...TGGGTCTCTTAACCCTTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp TGGACACAGTATATAACATTACACACATCCCCAAGGACCCAAGCAGTTATTTCCTATGCTAGTTGGTACTaGCATGGTAGCAATGTTAGG +
Preference number: 4 (lower is better)
Translates to: WTQYITLHTSPRTQAVISYASWY*HGSNVR
Trigger: CCTAACATTGCTACCATGGCAGTACCAACTAGCATA...GGAAATAACTGCTTGGGTCCTTGGGGATGTGTGTAATGTTATATACTGTGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149803.8
CDS-3UTR GCA 90 bp GCCATAATTCTTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGGAACAACAACCTGGCTaGCTGGGACAAAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: AIILAGYILYCIQKQLYMEQQPG*LGQRTA
Trigger: AGCAGTTCTTTGTCCCAGGCAGCCAGGTTGTTGTTC...CATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAAGAATTATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR GCA 90 bp TTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGGAACAACAACCTGGCTaGCTGGGACAAAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: LPAIYCIAFKSNCTCCNQEQQPG*LGQRTA
Trigger: AGCAGTTCTTTGTCCCAGGCAGCCAGGTTGTTGTTC...CTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR GCA 90 bp CGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCAGCTTCTTCTGCTAGTTaGTGGGGACTGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: RLYIVLHSKATVHAVISSASSAS*WGLCRL
Trigger: AAGCCTGCACAGTCCCCAGCAACTAGCAGAAGAAGC...TGAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151084.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp TCAAGACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCAGCTTCCAGAATCATCTGTCTCTaGAATTGTTGCTACCTGAGC +
Preference number: 4 (lower is better)
Translates to: SRHFTYSFFRRRHSLAASRIICL*NCCYLS
Trigger: GCTCAGGTAGCAACAATTGCAGAGACAGATGATTCT...GGAAGCTGCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGTCTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000082141.12
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
CDS-3UTR GCA 90 bp TGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTCTGAACTTCCAGCACTaGGACTCGACTCTCAAGACA +
Preference number: 4 (lower is better)
Translates to: CRLYIVLHSKATVHAVISLNFQH*DSTLKT
Trigger: TGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAG...ACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR CCA 90 bp TCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTTTACAAAGTGACTGGACCTGTACAGTTTaGCCTGAAGGTAACTGTACT +
Preference number: 4 (lower is better)
Translates to: SSTVAPKDSNTILSLQSDWTCTV*PEGNCT
Trigger: AGTACAGTTACCTTCAGGCCAAACTGTACAGGTCCA...GTCACTTTGTAAAGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000025069.11
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp TATAAGCTTCTTGTTCTGAACTTCCAGCACTGCGACTCGACTCTCAAGACACTTTTTCTTCTTCAATCTTaGGAATACCAGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: YKLLVLNFQHCDSTLKTLFLLQS*EYQAHQ
Trigger: CTGATGTGCCTGGTATTCCCAAGATTGAAGAAGAAA...AAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGCTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp CCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAAGGGTTAAGAGACCCACTGATATATGCTAGTTaGTACTGCCATGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: PNSHSTADCILKQGLRDPLIYAS*YCHGSN
Trigger: ATTGCTACCATGGCAGTACCAACTAGCATATATCAG...TGGGTCTCTTAACCCTTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp TTATTGCATAGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGAACAACCTGGCTGCCTaGGACAAAGAACTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: LLHRTLFMTERLGTVNMLNNLAA*DKELLC
Trigger: ACACAGCAGTTCTTTGTCCCAGGCAGCCAGGTTGTT...CAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCTATGCAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR CCA 90 bp ATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACAAGTCTTATTGGCATGTCACCTGTaGCAGCTTGAACAACAACCT +
Preference number: 4 (lower is better)
Translates to: IHDRETGNCKYVALEQVLLACHL*QLEQQP
Trigger: AGGTTGTTGTTCAAGCTGCCACAGGTGACATGCCAA...TAAGACTTGTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025069.11
ENSMUST00000129435.8
ENSMUST00000151311.8
CDS-3UTR CCA 90 bp ATAATTCTTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTCGGATCTGGTAAGTTaGCATGTCACCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: IILAGYILYCIQKQLYMLSDLVS*HVTCGS
Trigger: GCTGCCACAGGTGACATGCCAACTTACCAGATCCGA...CAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAAGAATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000131899.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151084.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp CGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCATCGGATCTGGTAAGTTaGCATGTCACCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: RLYIVLHSKATVHAVISSSDLVS*HVTCGS
Trigger: GCTGCCACAGGTGACATGCCAACTTACCAGATCCGA...TGAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151084.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp ATTTCATTTGAATGTTCTGGCATAAGGATATTTTATCATGGACCTGGAGAGATGTCGGATCTGGTAAGTTaGCATGTCACCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: ISFECSGIRIFYHGPGEMSDLVS*HVTCGS
Trigger: GCTGCCACAGGTGACATGCCAACTTACCAGATCCGA...CATCTCTCCAGGTCCATGATAAAATATCCTTATGCCAGAACATTCAAATGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151311.8
CDS-3UTR CCA 90 bp TTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGCATCACCACACCTTGTaGCAAAGCAGTAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: LPAIYCIAFKSNCTCCNQHHHTL*QSSSRS
Trigger: GCTCCTACTACTGCTTTGCCACAAGGTGTGGTGATG...CTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151084.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp CGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCATTGGCATGTCACCTGTaGCAGCAGCCATGTGACTTG +
Preference number: 4 (lower is better)
Translates to: RLYIVLHSKATVHAVISSLACHL*QQPCDL
Trigger: CAAGTCACATGGCTGCTGCCACAGGTGACATGCCAA...TGAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000150235.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp CTATGGGTTGATTTTATCTTACTACTGGAGAGATGCACTGCCTTTGATCACCCTCGAATCAATTACTTCTaGGTCTGCAGAATCATCTGT +
Preference number: 4 (lower is better)
Translates to: LWVDFILLLERCTAFDHPRINYF*VCRIIC
Trigger: ACAGATGATTCTGCAGACTCAGAAGTAATTGATTCG...AGGGTGATCAAAGGCAGTGCATCTCTCCAGTAGTAAGATAAAATCAACCCATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp TCGACTCTCAAGACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCCGAATCAATTACTTCTaGGTCTGCAGAATCATCTGT +
Preference number: 4 (lower is better)
Translates to: STLKTLHILFLSTSTFFSRINYF*VCRIIC
Trigger: ACAGATGATTCTGCAGACTCAGAAGTAATTGATTCG...GCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGTCTTGAGAGTCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp TGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAAGGGCGAATCAATTACTTCTaGGTCTGCAGAATCATCTGT +
Preference number: 4 (lower is better)
Translates to: WNSIPNSHSTADCILKQGRINYF*VCRIIC
Trigger: ACAGATGATTCTGCAGACTCAGAAGTAATTGATTCG...CCCTTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp AGGTTCCGTCATCGTGGAGTTTGTGATGTCACAATACAGCTAAGAACATCACAGGTTTCCATGGTCATTTaGCTTACATTTGTCCTCATA +
Preference number: 4 (lower is better)
Translates to: RFRHRGVCDVTIQLRTSQVSMVI*LTFVLI
Trigger: TATGAGGACAAATGTAAGGCAAATGACCATGGAAAC...CTGTGATGTTCTTAGCTGTATTGTGACATCACAAACTCCACGATGACGGAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000134027.8
CDS-3UTR GCA 90 bp TTGGACACAGTATATAACATTACACACATCCCCAAGGACCCAAGCAGTTATTTCGTTACACTTCGATCCTaGTGTGATTCAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: LDTVYNITHIPKDPSSYFVTLRS*CDSTVS
Trigger: GGAAACAGTTGAATCACAGCAGGATCGAAGTGTAAC...GAAATAACTGCTTGGGTCCTTGGGGATGTGTGTAATGTTATATACTGTGTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149803.8
CDS-3UTR GCA 90 bp TTGCATAGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTATGCTAGTTGGTACTaGCATGGTAGCAATGTTAGG +
Preference number: 4 (lower is better)
Translates to: LHRTLFMTERLGTVNMLHYASWY*HGSNVR
Trigger: CCTAACATTGCTACCATGGCAGTACCAACTAGCATA...GTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCTATGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp GACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACAATATGCTAGTTGGTACTaGCATGGTAGCAATGTTAGG +
Preference number: 4 (lower is better)
Translates to: DTIHDRETGNCKYVALEQYASWY*HGSNVR
Trigger: CCTAACATTGCTACCATGGCAGTACCAACTAGCATA...TTGTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp AACCCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGTATGCTAGTTGGTACTaGCATGGTAGCAATGTTAGG +
Preference number: 4 (lower is better)
Translates to: NPWNSIPNSHSTADCILKYASWY*HGSNVR
Trigger: CCTAACATTGCTACCATGGCAGTACCAACTAGCATA...CTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAATATGCTAGTTGGTACTaGCATGGTAGCAATGTTAGG +
Preference number: 4 (lower is better)
Translates to: PWNSIPNSHSTADCILKQYASWY*HGSNVR
Trigger: CCTAACATTGCTACCATGGCAGTACCAACTAGCATA...TTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp TCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTTTACAAAGTGACTATGCTAGTTGGTACTaGCATGGTAGCAATGTTAGG +
Preference number: 4 (lower is better)
Translates to: SSTVAPKDSNTILSLQSDYASWY*HGSNVR
Trigger: CCTAACATTGCTACCATGGCAGTACCAACTAGCATA...GTCACTTTGTAAAGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCACCTGGGACAAAGAACTaGTGTGTACCATCGGCTGAT +
Preference number: 4 (lower is better)
Translates to: RLYIVLHSKATVHAVISSPGTKN*CVPSAD
Trigger: ATCAGCCGATGGTACACAGCAGTTCTTTGTCCCAGG...TGAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR GCA 90 bp ATAATTCTTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGCCTGGGACAAAGAACTaGTGTGTACCATCGGCTGAT +
Preference number: 4 (lower is better)
Translates to: IILAGYILYCIQKQLYMLPGTKN*CVPSAD
Trigger: ATCAGCCGATGGTACACAGCAGTTCTTTGTCCCAGG...CAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAAGAATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR GCA 90 bp CGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCACTGAACTTCCAGCACTaGGACTCGACTCTCAAGACA +
Preference number: 4 (lower is better)
Translates to: RLYIVLHSKATVHAVISSLNFQH*DSTLKT
Trigger: TGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAG...TGAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR CCA 90 bp TCGACTCTCAAGACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCTTTCTTCTTCAATCTTaGGAATACCAGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: STLKTLHILFLSTSTFFSFLLQS*EYQAHQ
Trigger: CTGATGTGCCTGGTATTCCCAAGATTGAAGAAGAAA...GCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGTCTTGAGAGTCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp AGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACCTGATATATGCTAGTTaGTACTGCCATGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: RTLFMTERLGTVNMLHWNLIYAS*YCHGSN
Trigger: ATTGCTACCATGGCAGTACCAACTAGCATATATCAG...GTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp TCGACTCTCAAGACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCAACACCATCAGATCCTaGGTTAGAAATCTGGATTGT +
Preference number: 4 (lower is better)
Translates to: STLKTLHILFLSTSTFFSNTIRS*VRNLDC
Trigger: ACAATCCAGATTTCTAACCCAGGATCTGATGGTGTT...GCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGTCTTGAGAGTCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR CCA 90 bp CTATGGGTTGATTTTATCTTACTACTGGAGAGATGCACTGCCTTTGATCACCCTAACACCATCAGATCCTaGGTTAGAAATCTGGATTGT +
Preference number: 4 (lower is better)
Translates to: LWVDFILLLERCTAFDHPNTIRS*VRNLDC
Trigger: ACAATCCAGATTTCTAACCCAGGATCTGATGGTGTT...AGGGTGATCAAAGGCAGTGCATCTCTCCAGTAGTAAGATAAAATCAACCCATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR CCA 90 bp CGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCAAACAACCTGGCTGCCTaGGACAAAGAACTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: RLYIVLHSKATVHAVISSNNLAA*DKELLC
Trigger: ACACAGCAGTTCTTTGTCCCAGGCAGCCAGGTTGTT...TGAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR CCA 90 bp TGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTTGGCATGTCACCTGTaGCAGCTTGAACAACAACCT +
Preference number: 4 (lower is better)
Translates to: CRLYIVLHSKATVHAVISLACHL*QLEQQP
Trigger: AGGTTGTTGTTCAAGCTGCCACAGGTGACATGCCAA...ACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000025069.11
ENSMUST00000129435.8
ENSMUST00000151311.8
CDS-3UTR CCA 90 bp CGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCACATCACCACACCTTGTaGCAAAGCAGTAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: RLYIVLHSKATVHAVISSHHHTL*QSSSRS
Trigger: GCTCCTACTACTGCTTTGCCACAAGGTGTGGTGATG...TGAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151084.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp ATAATTCTTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTTGGCATGTCACCTGTaGCAGCAGTTTCATCTCCAG +
Preference number: 4 (lower is better)
Translates to: IILAGYILYCIQKQLYMLLACHL*QQFHLQ
Trigger: CTGGAGATGAAACTGCTGCCACAGGTGACATGCCAA...CAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAAGAATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140332.8
ENSMUST00000151084.8
CDS-3UTR TCA 90 bp CCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCACTTCGATCCTGCTGTaGTTCAACTGTTTCCATGGT +
Preference number: 4 (lower is better)
Translates to: PAIYCIAFKSNCTCCNQFTSILL*FNCFHG
Trigger: ACCATGGAAACAGTTGAATCACAGCAGGATCGAAGT...GAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp GTATTTGCAAGGCTGCTGATCCAGTGTAGCAATAAATTCATACTTGTGGAACTCCGAATCAATTACTTCTaGGTCTGCAGAATCATCTGT +
Preference number: 4 (lower is better)
Translates to: VFARLLIQCSNKFILVELRINYF*VCRIIC
Trigger: ACAGATGATTCTGCAGACTCAGAAGTAATTGATTCG...GAGTTCCACAAGTATGAATTTATTGCTACACTGGATCAGCAGCCTTGCAAATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp TCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTTTACAAAGTGACCGAATCAATTACTTCTaGGTCTGCAGAATCATCTGT +
Preference number: 4 (lower is better)
Translates to: SSTVAPKDSNTILSLQSDRINYF*VCRIIC
Trigger: ACAGATGATTCTGCAGACTCAGAAGTAATTGATTCG...GTCACTTTGTAAAGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp CGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCATGCCCCGTGCTAGTCTaGTATATGCTAGTTGGTACT +
Preference number: 4 (lower is better)
Translates to: RLYIVLHSKATVHAVISSCPVLV*YMLVGT
Trigger: AGTACCAACTAGCATATATCAGACTAGCACGGGGCA...TGAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp CAGCAAAGCAGCACAAACTTTTGTAGAAATTCACATACTACATACATAGTAGGATGCCCCGTGCTAGTCTaGTATATGCTAGTTGGTACT +
Preference number: 4 (lower is better)
Translates to: QQSSTNFCRNSHTTYIVGCPVLV*YMLVGT
Trigger: AGTACCAACTAGCATATATCAGACTAGCACGGGGCA...TCCTACTATGTATGTAGTATGTGAATTTCTACAAAAGTTTGTGCTGCTTTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp ATAATTCTTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTGCCCCGTGCTAGTCTaGTATATGCTAGTTGGTACT +
Preference number: 4 (lower is better)
Translates to: IILAGYILYCIQKQLYMLCPVLV*YMLVGT
Trigger: AGTACCAACTAGCATATATCAGACTAGCACGGGGCA...CAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAAGAATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000131899.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp AATTCATTTGTAGGCTATTCTCACGTAGTCATGTCATCAGGATACACTTCCTTTATAAGCTTCTTGTTCTaGACTTCCAGCACTGCGACT +
Preference number: 4 (lower is better)
Translates to: NSFVGYSHVVMSSGYTSFISFLF*TSSTAT
Trigger: AGTCGCAGTGCTGGAAGTTCAGAACAAGAAGCTTAT...AAAGGAAGTGTATCCTGATGACATGACTACGTGAGAATAGCCTACAAATGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR TCA 90 bp TTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGATAAGCTTCTTGTTCTaGACTTCCAGCACTGCGACT +
Preference number: 4 (lower is better)
Translates to: LPAIYCIAFKSNCTCCNQISFLF*TSSTAT
Trigger: AGTCGCAGTGCTGGAAGTTCAGAACAAGAAGCTTAT...CTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR TCA 90 bp CTGCTGATCCAGTGTAGCAATAAATTCATACTTGTGGAACTCATTCCAGATAATATAAGCTTCTTGTTCTaGACTTCCAGCACTGCGACT +
Preference number: 4 (lower is better)
Translates to: LLIQCSNKFILVELIPDNISFLF*TSSTAT
Trigger: AGTCGCAGTGCTGGAAGTTCAGAACAAGAAGCTTAT...ATTATCTGGAATGAGTTCCACAAGTATGAATTTATTGCTACACTGGATCAGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR GCA 90 bp TTAGAGTTCACAGTCAACAAGGTCCAAATCAAACACAGTTACTCTGCTTTATGGGTTACACTTCGATCCTaGTGTGATTCAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: LEFTVNKVQIKHSYSALWVTLRS*CDSTVS
Trigger: GGAAACAGTTGAATCACAGCAGGATCGAAGTGTAAC...CCATAAAGCAGAGTAACTGTGTTTGATTTGGACCTTGTTGACTGTGAACTCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000134027.8
ENSMUST00000148305.2
CDS-3UTR GCA 90 bp ACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCAGCTTCCCTGAATGTCTCTGCAATTGTTaGTACCTGAACAGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: TLHILFLSTSTFFSSFPECLCNC*YLNSLY
Trigger: ATACAAACTGTTCAGGTAGCAACAATTGCAGAGACA...TTCAGGGAAGCTGCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp TCGACTCTCAAGACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCTGTCTCTGCAATTGTTaGTACCTGAACAGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: STLKTLHILFLSTSTFFSCLCNC*YLNSLY
Trigger: ATACAAACTGTTCAGGTAGCAACAATTGCAGAGACA...GCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGTCTTGAGAGTCGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp GTTCTATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTATGCTAGTTGGTACTaGCATGGTAGCAATGTTAGG +
Preference number: 4 (lower is better)
Translates to: VLFKTVFNCGTQGQQYNTYASWY*HGSNVR
Trigger: CCTAACATTGCTACCATGGCAGTACCAACTAGCATA...AGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp GTTCTATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTAGAATCATCTGTCTCTaGAATTGTTGCTACCTGAGC +
Preference number: 4 (lower is better)
Translates to: VLFKTVFNCGTQGQQYNTRIICL*NCCYLS
Trigger: GCTCAGGTAGCAACAATTGCAGAGACAGATGATTCT...AGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000082141.12
ENSMUST00000151311.8
ENSMUST00000154135.8
CDS-3UTR GCA 90 bp ATTTGGACACAGTATATAACATTACACACATCCCCAAGGACCCAAGCAGTTATTAGAATCATCTGTCTCTaGAATTGTTGCTACCTGAGC +
Preference number: 4 (lower is better)
Translates to: IWTQYITLHTSPRTQAVIRIICL*NCCYLS
Trigger: GCTCAGGTAGCAACAATTGCAGAGACAGATGATTCT...AATAACTGCTTGGGTCCTTGGGGATGTGTGTAATGTTATATACTGTGTCCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149803.8
CDS-3UTR CCA 90 bp TCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTTTACAAAGTGACGATTTTCTTCTTCAATCTTaGGAATACCAGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: STVAPKDSNTILSLQSDDFLLQS*EYQAHQ
Trigger: CTGATGTGCCTGGTATTCCCAAGATTGAAGAAGAAA...ATCGTCACTTTGTAAAGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp AACCCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCTGATATATGCTAGTTaGTACTGCCATGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: NPWNSIPNSHSTADCILKLIYAS*YCHGSN
Trigger: ATTGCTACCATGGCAGTACCAACTAGCATATATCAG...CTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp TTGCATAGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACCTGATATATGCTAGTTaGTACTGCCATGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: LHRTLFMTERLGTVNMLHLIYAS*YCHGSN
Trigger: ATTGCTACCATGGCAGTACCAACTAGCATATATCAG...GTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCTATGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp TTGGACACAGTATATAACATTACACACATCCCCAAGGACCCAAGCAGTTATTTCCTGATATATGCTAGTTaGTACTGCCATGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: LDTVYNITHIPKDPSSYFLIYAS*YCHGSN
Trigger: ATTGCTACCATGGCAGTACCAACTAGCATATATCAG...GAAATAACTGCTTGGGTCCTTGGGGATGTGTGTAATGTTATATACTGTGTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149803.8
CDS-3UTR CCA 90 bp GACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACAACTGATATATGCTAGTTaGTACTGCCATGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: DTIHDRETGNCKYVALEQLIYAS*YCHGSN
Trigger: ATTGCTACCATGGCAGTACCAACTAGCATATATCAG...TTGTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp ATTTGGACACAGTATATAACATTACACACATCCCCAAGGACCCAAGCAGTTATTCGAATCAATTACTTCTaGGTCTGCAGAATCATCTGT +
Preference number: 4 (lower is better)
Translates to: IWTQYITLHTSPRTQAVIRINYF*VCRIIC
Trigger: ACAGATGATTCTGCAGACTCAGAAGTAATTGATTCG...AATAACTGCTTGGGTCCTTGGGGATGTGTGTAATGTTATATACTGTGTCCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149803.8
CDS-3UTR TCA 90 bp GTTCTATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTCGAATCAATTACTTCTaGGTCTGCAGAATCATCTGT +
Preference number: 4 (lower is better)
Translates to: VLFKTVFNCGTQGQQYNTRINYF*VCRIIC
Trigger: ACAGATGATTCTGCAGACTCAGAAGTAATTGATTCG...AGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp TGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTGGATTGTTCCACCTTaGGCTATAGCAATGTATTGC +
Preference number: 4 (lower is better)
Translates to: CRLYIVLHSKATVHAVISWIVPP*AIAMYC
Trigger: GCAATACATTGCTATAGCTCAAGGTGGAACAATCCA...ACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR TCA 90 bp TTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTGGATTGTTCCACCTTaGGCTATAGCAATGTATTGC +
Preference number: 4 (lower is better)
Translates to: LPAIYCIAFKSNCTCCNQWIVPP*AIAMYC
Trigger: GCAATACATTGCTATAGCTCAAGGTGGAACAATCCA...CTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR TCA 90 bp CGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCAATAAGCTTCTTGTTCTaGACTTCCAGCACTGCGACT +
Preference number: 4 (lower is better)
Translates to: RLYIVLHSKATVHAVISSISFLF*TSSTAT
Trigger: AGTCGCAGTGCTGGAAGTTCAGAACAAGAAGCTTAT...TGAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR GCA 90 bp CCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCGTTACACTTCGATCCTaGTGTGATTCAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: PAIYCIAFKSNCTCCNQFVTLRS*CDSTVS
Trigger: GGAAACAGTTGAATCACAGCAGGATCGAAGTGTAAC...GAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp TTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGGTTACACTTCGATCCTaGTGTGATTCAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: LPAIYCIAFKSNCTCCNQVTLRS*CDSTVS
Trigger: GGAAACAGTTGAATCACAGCAGGATCGAAGTGTAAC...CTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAATGTCTCTGCAATTGTTaGTACCTGAACAGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: PWNSIPNSHSTADCILKQCLCNC*YLNSLY
Trigger: ATACAAACTGTTCAGGTAGCAACAATTGCAGAGACA...TTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp TTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTATGCTAGTTGGTACTaGCATGGTAGCAATGTTAGG +
Preference number: 4 (lower is better)
Translates to: LPAIYCIAFKSNCTCCNQYASWY*HGSNVR
Trigger: CCTAACATTGCTACCATGGCAGTACCAACTAGCATA...CTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp GTTAGGGATCCGAGCTTATACCTTGAGTCTTTTCCTTATAAAAACAACTATGGATATGCTAGTTGGTACTaGCATGGTAGCAATGTTAGG +
Preference number: 4 (lower is better)
Translates to: VRDPSLYLESFPYKNNYGYASWY*HGSNVR
Trigger: CCTAACATTGCTACCATGGCAGTACCAACTAGCATA...TCCATAGTTGTTTTTATAAGGAAAAGACTCAAGGTATAAGCTCGGATCCCTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000151311.8
CDS-3UTR GCA 90 bp TTATTGCATAGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGTATGCTAGTTGGTACTaGCATGGTAGCAATGTTAGG +
Preference number: 4 (lower is better)
Translates to: LLHRTLFMTERLGTVNMLYASWY*HGSNVR
Trigger: CCTAACATTGCTACCATGGCAGTACCAACTAGCATA...CAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCTATGCAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp TATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTTATGCTAGTTGGTACTaGCATGGTAGCAATGTTAGG +
Preference number: 4 (lower is better)
Translates to: YLKLSSTVAPKDSNTILSYASWY*HGSNVR
Trigger: CCTAACATTGCTACCATGGCAGTACCAACTAGCATA...AGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp TTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGAGAATCATCTGTCTCTaGAATTGTTGCTACCTGAGC +
Preference number: 4 (lower is better)
Translates to: LPAIYCIAFKSNCTCCNQRIICL*NCCYLS
Trigger: GCTCAGGTAGCAACAATTGCAGAGACAGATGATTCT...CTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000082141.12
ENSMUST00000130599.8
ENSMUST00000151311.8
ENSMUST00000154135.8
CDS-3UTR CCA 90 bp GTTCTATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTTTCTTCTTCAATCTTaGGAATACCAGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: VLFKTVFNCGTQGQQYNTFLLQS*EYQAHQ
Trigger: CTGATGTGCCTGGTATTCCCAAGATTGAAGAAGAAA...AGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp ATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACAAGTCTTATTTCTTCTTCAATCTTaGGAATACCAGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: IHDRETGNCKYVALEQVLFLLQS*EYQAHQ
Trigger: CTGATGTGCCTGGTATTCCCAAGATTGAAGAAGAAA...TAAGACTTGTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp ATTTGGACACAGTATATAACATTACACACATCCCCAAGGACCCAAGCAGTTATTTTTCTTCTTCAATCTTaGGAATACCAGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: IWTQYITLHTSPRTQAVIFLLQS*EYQAHQ
Trigger: CTGATGTGCCTGGTATTCCCAAGATTGAAGAAGAAA...AATAACTGCTTGGGTCCTTGGGGATGTGTGTAATGTTATATACTGTGTCCAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149803.8
CDS-3UTR CCA 90 bp GTATCTCTATGGGTTGATTTTATCTTACTACTGGAGAGATGCACTGCCTTTGATTTTCTTCTTCAATCTTaGGAATACCAGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: VSLWVDFILLLERCTAFDFLLQS*EYQAHQ
Trigger: CTGATGTGCCTGGTATTCCCAAGATTGAAGAAGAAA...ATCAAAGGCAGTGCATCTCTCCAGTAGTAAGATAAAATCAACCCATAGAGATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp ATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACAAGTCTTACTGATATATGCTAGTTaGTACTGCCATGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: IHDRETGNCKYVALEQVLLIYAS*YCHGSN
Trigger: ATTGCTACCATGGCAGTACCAACTAGCATATATCAG...TAAGACTTGTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp CCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCCGAATCAATTACTTCTaGGTCTGCAGAATCATCTGT +
Preference number: 4 (lower is better)
Translates to: PAIYCIAFKSNCTCCNQFRINYF*VCRIIC
Trigger: ACAGATGATTCTGCAGACTCAGAAGTAATTGATTCG...GAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR TCA 90 bp CTGCTGATCCAGTGTAGCAATAAATTCATACTTGTGGAACTCATTCCAGATAATCGAATCAATTACTTCTaGGTCTGCAGAATCATCTGT +
Preference number: 4 (lower is better)
Translates to: LLIQCSNKFILVELIPDNRINYF*VCRIIC
Trigger: ACAGATGATTCTGCAGACTCAGAAGTAATTGATTCG...ATTATCTGGAATGAGTTCCACAAGTATGAATTTATTGCTACACTGGATCAGCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CAGCAAAGCAGCACAAACTTTTGTAGAAATTCACATACTACATACATAGTAGGAGTTACACTTCGATCCTaGTGTGATTCAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: QQSSTNFCRNSHTTYIVGVTLRS*CDSTVS
Trigger: GGAAACAGTTGAATCACAGCAGGATCGAAGTGTAAC...TCCTACTATGTATGTAGTATGTGAATTTCTACAAAAGTTTGTGCTGCTTTGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp ATAATTCTTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGGTTACACTTCGATCCTaGTGTGATTCAACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: IILAGYILYCIQKQLYMLVTLRS*CDSTVS
Trigger: GGAAACAGTTGAATCACAGCAGGATCGAAGTGTAAC...CAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAAGAATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000131899.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp GTTCTATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTGTCTCTGCAATTGTTaGTACCTGAACAGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: VLFKTVFNCGTQGQQYNTCLCNC*YLNSLY
Trigger: ATACAAACTGTTCAGGTAGCAACAATTGCAGAGACA...AGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000025069.11
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp TGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTAGAATCATCTGTCTCTaGAATTGTTGCTACCTGAAC +
Preference number: 4 (lower is better)
Translates to: CRLYIVLHSKATVHAVISRIICL*NCCYLN
Trigger: GTTCAGGTAGCAACAATTGCAGAGACAGATGATTCT...ACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000122958.8
ENSMUST00000131899.8
ENSMUST00000150235.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp ATAATTCTTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGAGAATCATCTGTCTCTaGAATTGTTGCTACCTGAGC +
Preference number: 4 (lower is better)
Translates to: IILAGYILYCIQKQLYMLRIICL*NCCYLS
Trigger: GCTCAGGTAGCAACAATTGCAGAGACAGATGATTCT...CAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAAGAATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000082141.12
ENSMUST00000151311.8
ENSMUST00000154135.8
CDS-3UTR CCA 90 bp GCCATAATTCTTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGTTTCTTCTTCAATCTTaGGAATACCAGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: AIILAGYILYCIQKQLYMFLLQS*EYQAHQ
Trigger: CTGATGTGCCTGGTATTCCCAAGATTGAAGAAGAAA...CATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAAGAATTATGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000131899.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp CCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCTTTCTTCTTCAATCTTaGGAATACCAGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: PAIYCIAFKSNCTCCNQFFLLQS*EYQAHQ
Trigger: CTGATGTGCCTGGTATTCCCAAGATTGAAGAAGAAA...GAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp TGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTCTGATATATGCTAGTTaGTACTGCCATGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: CRLYIVLHSKATVHAVISLIYAS*YCHGSN
Trigger: ATTGCTACCATGGCAGTACCAACTAGCATATATCAG...ACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp GCCATAATTCTTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGATATATGCTAGTTaGTACTGCCATGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: AIILAGYILYCIQKQLYMLIYAS*YCHGSN
Trigger: ATTGCTACCATGGCAGTACCAACTAGCATATATCAG...CATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAAGAATTATGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000131899.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp CTGCTGATCCAGTGTAGCAATAAATTCATACTTGTGGAACTCATTCCAGATAATAACACCATCAGATCCTaGGTTAGAAATCTGGATTGT +
Preference number: 4 (lower is better)
Translates to: LLIQCSNKFILVELIPDNNTIRS*VRNLDC
Trigger: ACAATCCAGATTTCTAACCCAGGATCTGATGGTGTT...ATTATCTGGAATGAGTTCCACAAGTATGAATTTATTGCTACACTGGATCAGCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR CCA 90 bp TATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTAACACCATCAGATCCTaGGTTAGAAATCTGGATTGT +
Preference number: 4 (lower is better)
Translates to: YLKLSSTVAPKDSNTILSNTIRS*VRNLDC
Trigger: ACAATCCAGATTTCTAACCCAGGATCTGATGGTGTT...AGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR CCA 90 bp TTATTGCATAGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGAACACCATCAGATCCTaGGTTAGAAATCTGGATTGT +
Preference number: 4 (lower is better)
Translates to: LLHRTLFMTERLGTVNMLNTIRS*VRNLDC
Trigger: ACAATCCAGATTTCTAACCCAGGATCTGATGGTGTT...CAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCTATGCAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR CCA 90 bp CCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCAACACCATCAGATCCTaGGTTAGAAATCTGGATTGT +
Preference number: 4 (lower is better)
Translates to: PAIYCIAFKSNCTCCNQFNTIRS*VRNLDC
Trigger: ACAATCCAGATTTCTAACCCAGGATCTGATGGTGTT...GAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR TCA 90 bp CGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCACGAATCAATTACTTCTaGGTCTGCAGAATCATCTGT +
Preference number: 4 (lower is better)
Translates to: RLYIVLHSKATVHAVISSRINYF*VCRIIC
Trigger: ACAGATGATTCTGCAGACTCAGAAGTAATTGATTCG...TGAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp AATTCATTTGTAGGCTATTCTCACGTAGTCATGTCATCAGGATACACTTCCTTTTGTCTCTGCAATTGTTaGTACCTGAACAGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: NSFVGYSHVVMSSGYTSFCLCNC*YLNSLY
Trigger: ATACAAACTGTTCAGGTAGCAACAATTGCAGAGACA...AAAGGAAGTGTATCCTGATGACATGACTACGTGAGAATAGCCTACAAATGAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000025069.11
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CAGCAAAGCAGCACAAACTTTTGTAGAAATTCACATACTACATACATAGTAGGAAGAATCATCTGTCTCTaGAATTGTTGCTACCTGAAC +
Preference number: 4 (lower is better)
Translates to: QQSSTNFCRNSHTTYIVGRIICL*NCCYLN
Trigger: GTTCAGGTAGCAACAATTGCAGAGACAGATGATTCT...TCCTACTATGTATGTAGTATGTGAATTTCTACAAAAGTTTGTGCTGCTTTGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000025069.11
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp CGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCATTTCTTCTTCAATCTTaGGAATACCAGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: RLYIVLHSKATVHAVISSFLLQS*EYQAHQ
Trigger: CTGATGTGCCTGGTATTCCCAAGATTGAAGAAGAAA...TGAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp CAGCAAAGCAGCACAAACTTTTGTAGAAATTCACATACTACATACATAGTAGGATTTCTTCTTCAATCTTaGGAATACCAGGCACATCAG +
Preference number: 4 (lower is better)
Translates to: QQSSTNFCRNSHTTYIVGFLLQS*EYQAHQ
Trigger: CTGATGTGCCTGGTATTCCCAAGATTGAAGAAGAAA...TCCTACTATGTATGTAGTATGTGAATTTCTACAAAAGTTTGTGCTGCTTTGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp CGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCACTGATATATGCTAGTTaGTACTGCCATGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: RLYIVLHSKATVHAVISSLIYAS*YCHGSN
Trigger: ATTGCTACCATGGCAGTACCAACTAGCATATATCAG...TGAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CCA 90 bp ATAATTCTTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGAACACCATCAGATCCTaGGTTAGAAATCTGGATTGT +
Preference number: 4 (lower is better)
Translates to: IILAGYILYCIQKQLYMLNTIRS*VRNLDC
Trigger: ACAATCCAGATTTCTAACCCAGGATCTGATGGTGTT...CAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAAGAATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR GCA 90 bp CGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCAGTTTCCATGGTCATTTaGCTTACATTTGTCCTCATA +
Preference number: 4 (lower is better)
Translates to: RLYIVLHSKATVHAVISSVSMVI*LTFVLI
Trigger: TATGAGGACAAATGTAAGGCAAATGACCATGGAAAC...TGAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp ATAATTCTTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGGTTTCCATGGTCATTTaGCTTACATTTGTCCTCATA +
Preference number: 4 (lower is better)
Translates to: IILAGYILYCIQKQLYMLVSMVI*LTFVLI
Trigger: TATGAGGACAAATGTAAGGCAAATGACCATGGAAAC...CAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAAGAATTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR GCA 90 bp CGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCATGTCTCTGCAATTGTTaGTACCTGAACAGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: RLYIVLHSKATVHAVISSCLCNC*YLNSLY
Trigger: ATACAAACTGTTCAGGTAGCAACAATTGCAGAGACA...TGAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000122958.8
ENSMUST00000131899.8
ENSMUST00000150235.8
ENSMUST00000154470.8
ENSMUST00000165086.8
3UTR CAA 72 bp CTATTCATGACAGAGAGACTGGGAACTGTAAATATGTaGCACTGGAACAAGTCTTACAAATACTTCATTTTA +
Preference number: 4 (lower is better)
Translates to: LFMTERLGTVNM*HWNKSYKYFIL
Trigger: TAAAATGAAGTATTTGTAAGACTTGTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CACTCCCGGGCAGCTTCCCTGTTTTTCATCAGCCTCAGCTCCCGCTTGCGAGTTCAGCAGCCATGTGACTaGGGGCAAGGTCAGTCTCCT +
Preference number: 5 (lower is better)
Translates to: HSRAASLFFISLSSRLRVQQPCD*GQGQSP
Trigger: AGGAGACTGACCTTGCCCCAAGTCACATGGCTGCTG...AACTCGCAAGCGGGAGCTGAGGCTGATGAAAAACAGGGAAGCTGCCCGGGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000148305.2
CDS-3UTR CAA 90 bp GACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGCTCGGATCTGGTAAGTaGGCATGTCACCTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: DPSTSPHGHYEDAASPAPLGSGK*ACHLWQ
Trigger: CTGCCACAGGTGACATGCCAACTTACCAGATCCGAG...CGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000148305.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGGCTCCCGCTTGCGAGTaGCTTCTTCTGCTAGTTGCT +
Preference number: 5 (lower is better)
Translates to: DPSTSPHGHYEDAASPAPAPACE*LLLLVA
Trigger: AGCAACTAGCAGAAGAAGCAACTCGCAAGCGGGAGC...CGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS CCA 90 bp CACACCTTGTGGCAAAGCAGTAGTAGGAGCTCGGATCTGGTAAGTTaGCATGTCACCTGTGGCAGCAGCCATGTGACTTGGGGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: HTLWQSSSRSSDLVS*HVTCGSSHVTWGKV
Trigger: GACCTTGCCCCAAGTCACATGGCTGCTGCCACAGGTGACATGCCAACTTACCAGATCCGAGCTCCTACTACTGCTTTGCCACAAGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000126578.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000144496.8
ENSMUST00000147138.8
ENSMUST00000148305.2
ENSMUST00000150235.8
ENSMUST00000152108.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154705.8
ENSMUST00000154715.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GAGACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCGCTCCCGCTTGCGAGTaGCTTCTTCTGCTAGTTGCT +
Preference number: 5 (lower is better)
Translates to: ETHLQVHMAIMRMLHRLPAPACE*LLLLVA
Trigger: AGCAACTAGCAGAAGAAGCAACTCGCAAGCGGGAGC...GGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTCAGCAGCCATGTGACTaGGGGCAAGGTCAGTCTCCT +
Preference number: 5 (lower is better)
Translates to: PSTSPHGHYEDAASPAPIQQPCD*GQGQSP
Trigger: AGGAGACTGACCTTGCCCCAAGTCACATGGCTGCTG...AATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000131899.8
ENSMUST00000148305.2
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS CCA 90 bp GATCTGGTAAGTTGGCATGTCACCTGTGGCAGCAGCCATGTGACTTaGGGCAAGGTCAGTCTCCTCATCTTGAACAACAACCTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: DLVSWHVTCGSSHVT*GKVSLLILNNNLAA
Trigger: GGCAGCCAGGTTGTTGTTCAAGATGAGGAGACTGACCTTGCCCCAAGTCACATGGCTGCTGCCACAGGTGACATGCCAACTTACCAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000126578.8
ENSMUST00000144496.8
ENSMUST00000150235.8
ENSMUST00000152900.8
ENSMUST00000154715.8
ENSMUST00000156234.8
CDS CCA 90 bp GATCTGGTAAGTTGGCATGTCACCTGTGGCAGCAGCCATGTGACTTaGGGCAAGGTCAGTCTCCTCATTGTATTGCCCCGTGCTAGTCTG +
Preference number: 5 (lower is better)
Translates to: DLVSWHVTCGSSHVT*GKVSLLIVLPRASL
Trigger: CAGACTAGCACGGGGCAATACAATGAGGAGACTGACCTTGCCCCAAGTCACATGGCTGCTGCCACAGGTGACATGCCAACTTACCAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000152108.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp ACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTAGAGTTAGCCTCAGCTCCCGCTaGCGAGTTGCTTCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: TSPHGHYEDAASPAPIRVSLSSR*RVASSA
Trigger: AGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCT...AACTCTAATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CCTAGAGCCCTGCAGTTGTCCTCTAATGAAATGGCCCAGTATTTGCAAGGCTGCCTCGGATCTGGTAAGTaGGCATGTCACCTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: PRALQLSSNEMAQYLQGCLGSGK*ACHLWQ
Trigger: CTGCCACAGGTGACATGCCAACTTACCAGATCCGAG...GCAGCCTTGCAAATACTGGGCCATTTCATTAGAGGACAACTGCAGGGCTCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp ACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTAGAGTTCTCGGATCTGGTAAGTaGGCATGTCACCTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: TSPHGHYEDAASPAPIRVLGSGK*ACHLWQ
Trigger: CTGCCACAGGTGACATGCCAACTTACCAGATCCGAG...AACTCTAATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000148305.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp AGGATGCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCCTCGGATCTGGTAAGTaGGCATGTCACCTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: RMLHRLPRLEFTVNKVQILGSGK*ACHLWQ
Trigger: CTGCCACAGGTGACATGCCAACTTACCAGATCCGAG...GATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000148305.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTAGCCATCACCACACCTaGTGGCAAAGCAGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: PSTSPHGHYEDAASPAPISHHHT*WQSSSR
Trigger: CCTACTACTGCTTTGCCACAAGGTGTGGTGATGGCT...AATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp ACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTAGAGTTGCTCCCGCTTGCGAGTaGCTTCTTCTGCTAGTTGCT +
Preference number: 5 (lower is better)
Translates to: TSPHGHYEDAASPAPIRVAPACE*LLLLVA
Trigger: AGCAACTAGCAGAAGAAGCAACTCGCAAGCGGGAGC...AACTCTAATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GGGTTAAGAGACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGAGCCTCAGCTCCCGCTaGCGAGTTGCTTCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: GLRDPSTSPHGHYEDAASSLSSR*RVASSA
Trigger: AGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCT...CGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTCTTAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAACAAGCCTCAGCTCCCGCTaGCGAGTTGCTTCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: AASPAPIRVHSQQGPNQTSLSSR*RVASSA
Trigger: AGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCT...TGTTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAACACAGCCTCAGCTCCCGCTaGCGAGTTGCTTCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: LHRLPRLEFTVNKVQIKHSLSSR*RVASSA
Trigger: AGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCT...GTGTTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTAGGTCTTTGAGGGCCTaGAGTTCCTCAATGAGGGTC +
Preference number: 5 (lower is better)
Translates to: PSTSPHGHYEDAASPAPIRSLRA*SSSMRV
Trigger: GACCCTCATTGAGGAACTCAAGGCCCTCAAAGACCT...AATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp AGGGGAGCTGCATTCCAACCCATGGAACAGTATTCCCAATTCACACTCTACAGCCAGCAGCCATGTGACTaGGGGCAAGGTCAGTCTCCT +
Preference number: 5 (lower is better)
Translates to: RGAAFQPMEQYSQFTLYSQQPCD*GQGQSP
Trigger: AGGAGACTGACCTTGCCCCAAGTCACATGGCTGCTG...GCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGTTGGAATGCAGCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000131899.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAACACAGCAGCCATGTGACTaGGGGCAAGGTCAGTCTCCT +
Preference number: 5 (lower is better)
Translates to: AASPAPIRVHSQQGPNQTQQPCD*GQGQSP
Trigger: AGGAGACTGACCTTGCCCCAAGTCACATGGCTGCTG...TGTTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000131899.8
ENSMUST00000148305.2
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GGGTTAAGAGACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCAGCAGCCATGTGACTaGGGGCAAGGTCAGTCTCCT +
Preference number: 5 (lower is better)
Translates to: GLRDPSTSPHGHYEDAASQQPCD*GQGQSP
Trigger: AGGAGACTGACCTTGCCCCAAGTCACATGGCTGCTG...CGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTCTTAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000131899.8
ENSMUST00000148305.2
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTGTCAGTCTCCTCATCTaGAACAACAACCTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: PSTSPHGHYEDAASPAPIVSLLI*NNNLAA
Trigger: GGCAGCCAGGTTGTTGTTCAAGATGAGGAGACTGAC...AATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000082141.12
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR CAA 90 bp CCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTACCTGTGGCAGTGTATaGCCCCGTGCTAGTCTGATA +
Preference number: 5 (lower is better)
Translates to: PSTSPHGHYEDAASPAPITCGSV*PRASLI
Trigger: TATCAGACTAGCACGGGGCAATACACTGCCACAGGT...AATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000137568.8
ENSMUST00000154470.8
CDS CCA 90 bp GATCTGGTAAGTTGGCATGTCACCTGTGGCAGCAGCCATGTGACTTaGGGCAAGGTCAGTCTCCTCATCAGTTTCATCTCCAGTTACAGC +
Preference number: 5 (lower is better)
Translates to: DLVSWHVTCGSSHVT*GKVSLLISFISSYS
Trigger: GCTGTAACTGGAGATGAAACTGATGAGGAGACTGACCTTGCCCCAAGTCACATGGCTGCTGCCACAGGTGACATGCCAACTTACCAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147138.8
ENSMUST00000154705.8
CDS-3UTR CAA 90 bp ATGCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAAGTCACCTGTGGCAGCTaGAACAACAACCTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: MLHRLPRLEFTVNKVQIKVTCGS*NNNLAA
Trigger: GGCAGCCAGGTTGTTGTTCAAGCTGCCACAGGTGAC...TTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025069.11
ENSMUST00000130455.8
CDS-3UTR CAA 90 bp AGGGGAGCTGCATTCCAACCCATGGAACAGTATTCCCAATTCACACTCTACAGCCTCGGATCTGGTAAGTaGGCATGTCACCTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: RGAAFQPMEQYSQFTLYSLGSGK*ACHLWQ
Trigger: CTGCCACAGGTGACATGCCAACTTACCAGATCCGAG...GCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGTTGGAATGCAGCTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp AGGATGCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAGCCATCACCACACCTaGTGGCAAAGCAGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: RMLHRLPRLEFTVNKVQISHHHT*WQSSSR
Trigger: CCTACTACTGCTTTGCCACAAGGTGTGGTGATGGCT...GATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TTCTGGCCCACATCCGTAATCCAAGCACTCAGAAGGCTGAGGCAAGAGAACTGTAGCCATCACCACACCTaGTGGCAAAGCAGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: FWPTSVIQALRRLRQENCSHHHT*WQSSSR
Trigger: CCTACTACTGCTTTGCCACAAGGTGTGGTGATGGCT...ACAGTTCTCTTGCCTCAGCCTTCTGAGTGCTTGGATTACGGATGTGGGCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GGTAATGTGAGGGGAGCTGCATTCCAACCCATGGAACAGTATTCCCAATTCACAAGCCTCAGCTCCCGCTaGCGAGTTGCTTCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: GNVRGAAFQPMEQYSQFTSLSSR*RVASSA
Trigger: AGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCT...TGTGAATTGGGAATACTGTTCCATGGGTTGGAATGCAGCTCCCCTCACATTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GCTTCTTGTTCTGAACTTCCAGCACTGCGACTCGACTCTCAAGACACTTCACATAGCCTCAGCTCCCGCTaGCGAGTTGCTTCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: ASCSELPALRLDSQDTSHSLSSR*RVASSA
Trigger: AGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCT...ATGTGAAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp ACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTAGAGTTAGGTCTTTGAGGGCCTaGAGTTCCTCAATGAGGGTC +
Preference number: 5 (lower is better)
Translates to: TSPHGHYEDAASPAPIRVRSLRA*SSSMRV
Trigger: GACCCTCATTGAGGAACTCAAGGCCCTCAAAGACCT...AACTCTAATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp AGGATGCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAGGTCTTTGAGGGCCTaGAGTTCCTCAATGAGGGTC +
Preference number: 5 (lower is better)
Translates to: RMLHRLPRLEFTVNKVQIRSLRA*SSSMRV
Trigger: GACCCTCATTGAGGAACTCAAGGCCCTCAAAGACCT...GATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GAGACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCATCTGTCTCTGCAATaGTTGCTACCTGAGCTAGAG +
Preference number: 5 (lower is better)
Translates to: ETHLQVHMAIMRMLHRLPHLSLQ*LLPELE
Trigger: CTCTAGCTCAGGTAGCAACAATTGCAGAGACAGATG...GGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000082141.12
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
CDS-3UTR CAA 90 bp TTCTGGCCCACATCCGTAATCCAAGCACTCAGAAGGCTGAGGCAAGAGAACTGTGTCAGTCTCCTCATCTaGAACAACAACCTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: FWPTSVIQALRRLRQENCVSLLI*NNNLAA
Trigger: GGCAGCCAGGTTGTTGTTCAAGATGAGGAGACTGAC...ACAGTTCTCTTGCCTCAGCCTTCTGAGTGCTTGGATTACGGATGTGGGCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
CDS-3UTR CAA 90 bp ACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTAGAGTTAGGTCAGTCTCCTCATaGTATTGCCCCGTGCTAGTC +
Preference number: 5 (lower is better)
Translates to: TSPHGHYEDAASPAPIRVRSVSS*YCPVLV
Trigger: GACTAGCACGGGGCAATACAATGAGGAGACTGACCT...AACTCTAATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000131899.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS CCA 90 bp CACACCTTGTGGCAAAGCAGTAGTAGGAGCTCGGATCTGGTAAGTTaGCATGTCACCTGTGGCAGCAGTTTCATCTCCAGTTACAGCCAT +
Preference number: 5 (lower is better)
Translates to: HTLWQSSSRSSDLVS*HVTCGSSFISSYSH
Trigger: ATGGCTGTAACTGGAGATGAAACTGCTGCCACAGGTGACATGCCAACTTACCAGATCCGAGCTCCTACTACTGCTTTGCCACAAGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140332.8
ENSMUST00000151084.8
CDS-3UTR CAA 90 bp GAGACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCAGCTATAGCAATGTATaGCCCCGTGCTAGTCTGATA +
Preference number: 5 (lower is better)
Translates to: ETHLQVHMAIMRMLHRLPSYSNV*PRASLI
Trigger: TATCAGACTAGCACGGGGCAATACATTGCTATAGCT...GGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR CAA 90 bp GCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAACAAGCCATCACCACACCTaGTGGCAAAGCAGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: AASPAPIRVHSQQGPNQTSHHHT*WQSSSR
Trigger: CCTACTACTGCTTTGCCACAAGGTGTGGTGATGGCT...TGTTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GGGTTAAGAGACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGAGCCATCACCACACCTaGTGGCAAAGCAGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: GLRDPSTSPHGHYEDAASSHHHT*WQSSSR
Trigger: CCTACTACTGCTTTGCCACAAGGTGTGGTGATGGCT...CGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTCTTAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAACACAGCCATCACCACACCTaGTGGCAAAGCAGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: LHRLPRLEFTVNKVQIKHSHHHT*WQSSSR
Trigger: CCTACTACTGCTTTGCCACAAGGTGTGGTGATGGCT...GTGTTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GCTTCTTGTTCTGAACTTCCAGCACTGCGACTCGACTCTCAAGACACTTCACATGCTCCCGCTTGCGAGTaGCTTCTTCTGCTAGTTGCT +
Preference number: 5 (lower is better)
Translates to: ASCSELPALRLDSQDTSHAPACE*LLLLVA
Trigger: AGCAACTAGCAGAAGAAGCAACTCGCAAGCGGGAGC...ATGTGAAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp ATGCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAAGCTCCCGCTTGCGAGTaGCTTCTTCTGCTAGTTGCT +
Preference number: 5 (lower is better)
Translates to: MLHRLPRLEFTVNKVQIKAPACE*LLLLVA
Trigger: AGCAACTAGCAGAAGAAGCAACTCGCAAGCGGGAGC...TTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000154705.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAACACACCTGTGGCAGTGTATaGCCCCGTGCTAGTCTGATA +
Preference number: 5 (lower is better)
Translates to: LHRLPRLEFTVNKVQIKHTCGSV*PRASLI
Trigger: TATCAGACTAGCACGGGGCAATACACTGCCACAGGT...GTGTTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000137568.8
ENSMUST00000154470.8
CDS-3UTR CAA 90 bp CTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTAGAGAGTCTCCTCATTGTATaGCCCCGTGCTAGTCTGATA +
Preference number: 5 (lower is better)
Translates to: LQVHMAIMRMLHRLPRLESLLIV*PRASLI
Trigger: TATCAGACTAGCACGGGGCAATACAATGAGGAGACT...CTCTAATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000131899.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAACACAGGTCAGTCTCCTCATaGTATTGCCCCGTGCTAGTC +
Preference number: 5 (lower is better)
Translates to: LHRLPRLEFTVNKVQIKHRSVSS*YCPVLV
Trigger: GACTAGCACGGGGCAATACAATGAGGAGACTGACCT...GTGTTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000131899.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GAGACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCTGTCTCTGCAATTGTaGCTACCTGAACAGTTTGTA +
Preference number: 5 (lower is better)
Translates to: ETHLQVHMAIMRMLHRLPLSLQL*LPEQFV
Trigger: TACAAACTGTTCAGGTAGCAACAATTGCAGAGACAG...GGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTAGAGAGCTATAGCAATGTATaGCCCCGTGCTAGTCTGATA +
Preference number: 5 (lower is better)
Translates to: LQVHMAIMRMLHRLPRLESYSNV*PRASLI
Trigger: TATCAGACTAGCACGGGGCAATACATTGCTATAGCT...CTCTAATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR CAA 90 bp GCAACCAACATGGTTCTATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGAGCCTCAGCTCCCGCTaGCGAGTTGCTTCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: ATNMVLFKTVFNCGTQGQSLSSR*RVASSA
Trigger: AGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCT...CTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATAGAACCATGTTGGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAAGGGTTAAGAGACCCAAGCCTCAGCTCCCGCTaGCGAGTTGCTTCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: PNSHSTADCILKQGLRDPSLSSR*RVASSA
Trigger: AGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCT...TGGGTCTCTTAACCCTTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GCTTCTTGTTCTGAACTTCCAGCACTGCGACTCGACTCTCAAGACACTTCACATAGGTCTTTGAGGGCCTaGAGTTCCTCAATGAGGGTC +
Preference number: 5 (lower is better)
Translates to: ASCSELPALRLDSQDTSHRSLRA*SSSMRV
Trigger: GACCCTCATTGAGGAACTCAAGGCCCTCAAAGACCT...ATGTGAAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GGTAATGTGAGGGGAGCTGCATTCCAACCCATGGAACAGTATTCCCAATTCACAAGGTCTTTGAGGGCCTaGAGTTCCTCAATGAGGGTC +
Preference number: 5 (lower is better)
Translates to: GNVRGAAFQPMEQYSQFTRSLRA*SSSMRV
Trigger: GACCCTCATTGAGGAACTCAAGGCCCTCAAAGACCT...TGTGAATTGGGAATACTGTTCCATGGGTTGGAATGCAGCTCCCCTCACATTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS TCA 90 bp CTTGGGGCAAGGTCAGTCTCCTCATTGTATTGCCCCGTGCTAGTCTaGTATATGCTAGTTGGTACTGCCATGGTAGCAATGTTAGGTGGT +
Preference number: 5 (lower is better)
Translates to: LGARSVSSLYCPVLV*YMLVGTAMVAMLGG
Trigger: ACCACCTAACATTGCTACCATGGCAGTACCAACTAGCATATATCAGACTAGCACGGGGCAATACAATGAGGAGACTGACCTTGCCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000152108.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CCTAGAGCCCTGCAGTTGTCCTCTAATGAAATGGCCCAGTATTTGCAAGGCTGCGAGGAGCTCCTGAATTaGTCATTGTTAATGCCTGGA +
Preference number: 5 (lower is better)
Translates to: PRALQLSSNEMAQYLQGCEELLN*SLLMPG
Trigger: TCCAGGCATTAACAATGACAAATTCAGGAGCTCCTC...GCAGCCTTGCAAATACTGGGCCATTTCATTAGAGGACAACTGCAGGGCTCTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR CAA 90 bp ACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCAGCTTCCCTGAAGTCACCTGTGGCAGCTaGAACAACAACCTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: TLHILFLSTSTFFSSFPEVTCGS*NNNLAA
Trigger: GGCAGCCAGGTTGTTGTTCAAGCTGCCACAGGTGAC...TTCAGGGAAGCTGCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025069.11
ENSMUST00000130455.8
CDS-3UTR CAA 90 bp TATAAGCTTCTTGTTCTGAACTTCCAGCACTGCGACTCGACTCTCAAGACACTTCTCGGATCTGGTAAGTaGGCATGTCACCTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: YKLLVLNFQHCDSTLKTLLGSGK*ACHLWQ
Trigger: CTGCCACAGGTGACATGCCAACTTACCAGATCCGAG...AAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGCTTATA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAAGGGTTAAGAGACCCAGCTCCCGCTTGCGAGTaGCTTCTTCTGCTAGTTGCT +
Preference number: 5 (lower is better)
Translates to: PNSHSTADCILKQGLRDPAPACE*LLLLVA
Trigger: AGCAACTAGCAGAAGAAGCAACTCGCAAGCGGGAGC...TGGGTCTCTTAACCCTTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp ACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCAGCTTCCCTGAAAGCCTCAGCTCCCGCTaGCGAGTTGCTTCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: TLHILFLSTSTFFSSFPESLSSR*RVASSA
Trigger: AGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCT...TTCAGGGAAGCTGCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TCGACTCTCAAGACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCAGCCTCAGCTCCCGCTaGCGAGTTGCTTCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: STLKTLHILFLSTSTFFSSLSSR*RVASSA
Trigger: AGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCT...GCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGTCTTGAGAGTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTTTACAAAGTGACGCAGCAGCCATGTGACTaGGGGCAAGGTCAGTCTCCT +
Preference number: 5 (lower is better)
Translates to: LQLWHPRTAIQYFLYKVTQQPCD*GQGQSP
Trigger: AGGAGACTGACCTTGCCCCAAGTCACATGGCTGCTG...CGTCACTTTGTAAAGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TCGACTCTCAAGACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCCAGCAGCCATGTGACTaGGGGCAAGGTCAGTCTCCT +
Preference number: 5 (lower is better)
Translates to: STLKTLHILFLSTSTFFSQQPCD*GQGQSP
Trigger: AGGAGACTGACCTTGCCCCAAGTCACATGGCTGCTG...GCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGTCTTGAGAGTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000131899.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GGGTTAAGAGACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGAGTCTCCTCATTGTATaGCCCCGTGCTAGTCTGATA +
Preference number: 5 (lower is better)
Translates to: GLRDPSTSPHGHYEDAASSLLIV*PRASLI
Trigger: TATCAGACTAGCACGGGGCAATACAATGAGGAGACT...CGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTCTTAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000131899.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS CCA 90 bp AGTCTCCTCATTGTATTGCCCCGTGCTAGTCTGATATATGCTAGTTaGTACTGCCATGGTAGCAATGTTAGGTGGTGTCCCTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: SLLIVLPRASLIYAS*YCHGSNVRWCPFFL
Trigger: GAGGAAGAAGGGACACCACCTAACATTGCTACCATGGCAGTACCAACTAGCATATATCAGACTAGCACGGGGCAATACAATGAGGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000152108.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTAGAGTTTTCTTCTTCAATCTaGGGAATACCAGGCACATCA +
Preference number: 5 (lower is better)
Translates to: LQVHMAIMRMLHRLPRLEFSSSI*GIPGTS
Trigger: TGATGTGCCTGGTATTCCCAAGATTGAAGAAGAAAA...CTCTAATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCCTGCCCCGATTTTTTCTTCTTCAATCTaGGGAATACCAGGCACATCA +
Preference number: 5 (lower is better)
Translates to: PSTSPHGHYEDAASPAPIFSSSI*GIPGTS
Trigger: TGATGTGCCTGGTATTCCCAAGATTGAAGAAGAAAA...AATCGGGGCAGGCGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TTGCATAGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACGTCACCTGTGGCAGCTaGAACAACAACCTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: LHRTLFMTERLGTVNMLHVTCGS*NNNLAA
Trigger: GGCAGCCAGGTTGTTGTTCAAGCTGCCACAGGTGAC...GTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCTATGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025069.11
ENSMUST00000129435.8
ENSMUST00000151311.8
CDS-3UTR CAA 90 bp ACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCAGCTTCCCTGAACTCGGATCTGGTAAGTaGGCATGTCACCTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: TLHILFLSTSTFFSSFPELGSGK*ACHLWQ
Trigger: CTGCCACAGGTGACATGCCAACTTACCAGATCCGAG...TTCAGGGAAGCTGCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TCAAGACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCAGCTTCCCTCGGATCTGGTAAGTaGGCATGTCACCTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: SRHFTYSFFRRRHSLAASLGSGK*ACHLWQ
Trigger: CTGCCACAGGTGACATGCCAACTTACCAGATCCGAG...GGAAGCTGCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGTCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp AGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACCTCGGATCTGGTAAGTaGGCATGTCACCTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: RTLFMTERLGTVNMLHWNLGSGK*ACHLWQ
Trigger: CTGCCACAGGTGACATGCCAACTTACCAGATCCGAG...GTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TCGACTCTCAAGACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCCTCGGATCTGGTAAGTaGGCATGTCACCTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: STLKTLHILFLSTSTFFSLGSGK*ACHLWQ
Trigger: CTGCCACAGGTGACATGCCAACTTACCAGATCCGAG...GCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGTCTTGAGAGTCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAAGGGTTAAGAGACCCAAGCCATCACCACACCTaGTGGCAAAGCAGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: PNSHSTADCILKQGLRDPSHHHT*WQSSSR
Trigger: CCTACTACTGCTTTGCCACAAGGTGTGGTGATGGCT...TGGGTCTCTTAACCCTTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TCGACTCTCAAGACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCGCTCCCGCTTGCGAGTaGCTTCTTCTGCTAGTTGCT +
Preference number: 5 (lower is better)
Translates to: STLKTLHILFLSTSTFFSAPACE*LLLLVA
Trigger: AGCAACTAGCAGAAGAAGCAACTCGCAAGCGGGAGC...GCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGTCTTGAGAGTCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GTATTTGCAAGGCTGCTGATCCAGTGTAGCAATAAATTCATACTTGTGGAACTCAGCCTCAGCTCCCGCTaGCGAGTTGCTTCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: VFARLLIQCSNKFILVELSLSSR*RVASSA
Trigger: AGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCT...GAGTTCCACAAGTATGAATTTATTGCTACACTGGATCAGCAGCCTTGCAAATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACAAAGCCTCAGCTCCCGCTaGCGAGTTGCTTCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: DTIHDRETGNCKYVALEQSLSSR*RVASSA
Trigger: AGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCT...TTGTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTTTACAAAGTGACAGCCTCAGCTCCCGCTaGCGAGTTGCTTCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: SSTVAPKDSNTILSLQSDSLSSR*RVASSA
Trigger: AGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCT...GTCACTTTGTAAAGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAAGGGTTAAGAGACCCAAGGTCTTTGAGGGCCTaGAGTTCCTCAATGAGGGTC +
Preference number: 5 (lower is better)
Translates to: PNSHSTADCILKQGLRDPRSLRA*SSSMRV
Trigger: GACCCTCATTGAGGAACTCAAGGCCCTCAAAGACCT...TGGGTCTCTTAACCCTTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAACAGCAGCCATGTGACTaGGGGCAAGGTCAGTCTCCT +
Preference number: 5 (lower is better)
Translates to: PWNSIPNSHSTADCILKQQQPCD*GQGQSP
Trigger: AGGAGACTGACCTTGCCCCAAGTCACATGGCTGCTG...TTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000131899.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GCTTCTTGTTCTGAACTTCCAGCACTGCGACTCGACTCTCAAGACACTTCACATCATCTGTCTCTGCAATaGTTGCTACCTGAGCTAGAG +
Preference number: 5 (lower is better)
Translates to: ASCSELPALRLDSQDTSHHLSLQ*LLPELE
Trigger: CTCTAGCTCAGGTAGCAACAATTGCAGAGACAGATG...ATGTGAAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000082141.12
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
CDS-3UTR CAA 90 bp TATAAGCTTCTTGTTCTGAACTTCCAGCACTGCGACTCGACTCTCAAGACACTTGTCAGTCTCCTCATCTaGAACAACAACCTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: YKLLVLNFQHCDSTLKTLVSLLI*NNNLAA
Trigger: GGCAGCCAGGTTGTTGTTCAAGATGAGGAGACTGAC...AAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGCTTATA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000082141.12
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS CCA 90 bp AGCTATAGCAATGTATTGCCCCGTGCTAGTCTGATATATGCTAGTTaGTACTGCCATGGTAGCAATGTTAGGTGGTGTCCCTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: SYSNVLPRASLIYAS*YCHGSNVRWCPFFL
Trigger: GAGGAAGAAGGGACACCACCTAACATTGCTACCATGGCAGTACCAACTAGCATATATCAGACTAGCACGGGGCAATACATTGCTATAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000126578.8
ENSMUST00000127601.8
ENSMUST00000129435.8
ENSMUST00000130455.8
ENSMUST00000136961.8
ENSMUST00000144496.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000152900.8
ENSMUST00000154715.8
ENSMUST00000156234.8
CDS-3UTR CAA 90 bp TTCTGGCCCACATCCGTAATCCAAGCACTCAGAAGGCTGAGGCAAGAGAACTGTTGTTTCCATGGTCATTaGCCTTACATTTGTCCTCAT +
Preference number: 5 (lower is better)
Translates to: FWPTSVIQALRRLRQENCCFHGH*PYICPH
Trigger: ATGAGGACAAATGTAAGGCAAATGACCATGGAAACA...ACAGTTCTCTTGCCTCAGCCTTCTGAGTGCTTGGATTACGGATGTGGGCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GGGTTAAGAGACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGCTGTCTCTGCAATTGTaGCTACCTGAACAGTTTGTA +
Preference number: 5 (lower is better)
Translates to: GLRDPSTSPHGHYEDAASLSLQL*LPEQFV
Trigger: TACAAACTGTTCAGGTAGCAACAATTGCAGAGACAG...CGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTCTTAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAACACCTGTCTCTGCAATTGTaGCTACCTGAACAGTTTGTA +
Preference number: 5 (lower is better)
Translates to: LHRLPRLEFTVNKVQIKHLSLQL*LPEQFV
Trigger: TACAAACTGTTCAGGTAGCAACAATTGCAGAGACAG...GTGTTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp AGGATGCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCTTTTCTTCTTCAATCTaGGGAATACCAGGCACATCA +
Preference number: 5 (lower is better)
Translates to: RMLHRLPRLEFTVNKVQIFSSSI*GIPGTS
Trigger: TGATGTGCCTGGTATTCCCAAGATTGAAGAAGAAAA...GATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GGTAATGTGAGGGGAGCTGCATTCCAACCCATGGAACAGTATTCCCAATTCACAAGCTATAGCAATGTATaGCCCCGTGCTAGTCTGATA +
Preference number: 5 (lower is better)
Translates to: GNVRGAAFQPMEQYSQFTSYSNV*PRASLI
Trigger: TATCAGACTAGCACGGGGCAATACATTGCTATAGCT...TGTGAATTGGGAATACTGTTCCATGGGTTGGAATGCAGCTCCCCTCACATTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR CAA 90 bp AGGGGAGCTGCATTCCAACCCATGGAACAGTATTCCCAATTCACACTCTACAGCCTGGATTGTTCCACCTaGAGCTATAGCAATGTATTG +
Preference number: 5 (lower is better)
Translates to: RGAAFQPMEQYSQFTLYSLDCST*SYSNVL
Trigger: CAATACATTGCTATAGCTCAAGGTGGAACAATCCAG...GCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGTTGGAATGCAGCTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR CAA 90 bp GCTTCTTGTTCTGAACTTCCAGCACTGCGACTCGACTCTCAAGACACTTCACATGAGGAGCTCCTGAATTaGTCATTGTTAATGCCTGGA +
Preference number: 5 (lower is better)
Translates to: ASCSELPALRLDSQDTSHEELLN*SLLMPG
Trigger: TCCAGGCATTAACAATGACAAATTCAGGAGCTCCTC...ATGTGAAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR CAA 90 bp ATGCTGCATCGCCTGCCCCGATTAGAGTTCACAGTCAACAAGGTCCAAATCAAAGAGGAGCTCCTGAATTaGTCATTGTTAATGCCTGGA +
Preference number: 5 (lower is better)
Translates to: MLHRLPRLEFTVNKVQIKEELLN*SLLMPG
Trigger: TCCAGGCATTAACAATGACAAATTCAGGAGCTCCTC...TTTGATTTGGACCTTGTTGACTGTGAACTCTAATCGGGGCAGGCGATGCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR CAA 90 bp AACCCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCTCGGATCTGGTAAGTaGGCATGTCACCTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: NPWNSIPNSHSTADCILKLGSGK*ACHLWQ
Trigger: CTGCCACAGGTGACATGCCAACTTACCAGATCCGAG...CTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CTATGGGTTGATTTTATCTTACTACTGGAGAGATGCACTGCCTTTGATCACCCTAGCCATCACCACACCTaGTGGCAAAGCAGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: LWVDFILLLERCTAFDHPSHHHT*WQSSSR
Trigger: CCTACTACTGCTTTGCCACAAGGTGTGGTGATGGCT...AGGGTGATCAAAGGCAGTGCATCTCTCCAGTAGTAAGATAAAATCAACCCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAAGGGAGCCATCACCACACCTaGTGGCAAAGCAGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: WNSIPNSHSTADCILKQGSHHHT*WQSSSR
Trigger: CCTACTACTGCTTTGCCACAAGGTGTGGTGATGGCT...CCCTTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp ACCCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAGCCATCACCACACCTaGTGGCAAAGCAGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: THGTVFPIHTLQQTVFLSSHHHT*WQSSSR
Trigger: CCTACTACTGCTTTGCCACAAGGTGTGGTGATGGCT...GCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TCGACTCTCAAGACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCAGCCATCACCACACCTaGTGGCAAAGCAGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: STLKTLHILFLSTSTFFSSHHHT*WQSSSR
Trigger: CCTACTACTGCTTTGCCACAAGGTGTGGTGATGGCT...GCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGTCTTGAGAGTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp AACCCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGGCTCCCGCTTGCGAGTaGCTTCTTCTGCTAGTTGCT +
Preference number: 5 (lower is better)
Translates to: NPWNSIPNSHSTADCILKAPACE*LLLLVA
Trigger: AGCAACTAGCAGAAGAAGCAACTCGCAAGCGGGAGC...CTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAAGCTCCCGCTTGCGAGTaGCTTCTTCTGCTAGTTGCT +
Preference number: 5 (lower is better)
Translates to: PWNSIPNSHSTADCILKQAPACE*LLLLVA
Trigger: AGCAACTAGCAGAAGAAGCAACTCGCAAGCGGGAGC...TTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TGGTTCTATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGCAATACAATAAGCCTCAGCTCCCGCTaGCGAGTTGCTTCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: WFYLKLSSTVAPKDSNTISLSSR*RVASSA
Trigger: AGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCT...TATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATAGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp ACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCAGCTTCCCTGAAAGGTCTTTGAGGGCCTaGAGTTCCTCAATGAGGGTC +
Preference number: 5 (lower is better)
Translates to: TLHILFLSTSTFFSSFPERSLRA*SSSMRV
Trigger: GACCCTCATTGAGGAACTCAAGGCCCTCAAAGACCT...TTCAGGGAAGCTGCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TCGACTCTCAAGACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCAGGTCTTTGAGGGCCTaGAGTTCCTCAATGAGGGTC +
Preference number: 5 (lower is better)
Translates to: STLKTLHILFLSTSTFFSRSLRA*SSSMRV
Trigger: GACCCTCATTGAGGAACTCAAGGCCCTCAAAGACCT...GCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGTCTTGAGAGTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GTATCTCTATGGGTTGATTTTATCTTACTACTGGAGAGATGCACTGCCTTTGATCAGCAGCCATGTGACTaGGGGCAAGGTCAGTCTCCT +
Preference number: 5 (lower is better)
Translates to: VSLWVDFILLLERCTAFDQQPCD*GQGQSP
Trigger: AGGAGACTGACCTTGCCCCAAGTCACATGGCTGCTG...ATCAAAGGCAGTGCATCTCTCCAGTAGTAAGATAAAATCAACCCATAGAGATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GGGTTAAGAGACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGTGTTTCCATGGTCATTaGCCTTACATTTGTCCTCAT +
Preference number: 5 (lower is better)
Translates to: GLRDPSTSPHGHYEDAASCFHGH*PYICPH
Trigger: ATGAGGACAAATGTAAGGCAAATGACCATGGAAACA...CGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTCTTAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000134027.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GCTTCTTGTTCTGAACTTCCAGCACTGCGACTCGACTCTCAAGACACTTCACATCATCTGTCTCTGCAATaGTTGCTACCTGAACAGTTT +
Preference number: 5 (lower is better)
Translates to: ASCSELPALRLDSQDTSHHLSLQ*LLPEQF
Trigger: AAACTGTTCAGGTAGCAACAATTGCAGAGACAGATG...ATGTGAAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp AGGGGAGCTGCATTCCAACCCATGGAACAGTATTCCCAATTCACACTCTACAGCTTTTCTTCTTCAATCTaGGGAATACCAGGCACATCA +
Preference number: 5 (lower is better)
Translates to: RGAAFQPMEQYSQFTLYSFSSSI*GIPGTS
Trigger: TGATGTGCCTGGTATTCCCAAGATTGAAGAAGAAAA...GCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGTTGGAATGCAGCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GGGTTAAGAGACCCATCTACAAGTCCACATGGCCATTATGAGGATGCTGCATCGTTTTCTTCTTCAATCTaGGGAATACCAGGCACATCA +
Preference number: 5 (lower is better)
Translates to: GLRDPSTSPHGHYEDAASFSSSI*GIPGTS
Trigger: TGATGTGCCTGGTATTCCCAAGATTGAAGAAGAAAA...CGATGCAGCATCCTCATAATGGCCATGTGGACTTGTAGATGGGTCTCTTAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GCTTCTTGTTCTGAACTTCCAGCACTGCGACTCGACTCTCAAGACACTTCACATCTGGATTGTTCCACCTaGAGCTATAGCAATGTATTG +
Preference number: 5 (lower is better)
Translates to: ASCSELPALRLDSQDTSHLDCST*SYSNVL
Trigger: CAATACATTGCTATAGCTCAAGGTGGAACAATCCAG...ATGTGAAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR CAA 90 bp GCCATAATTCTTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGGTCACCTGTGGCAGCTaGAACAACAACCTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: AIILAGYILYCIQKQLYMVTCGS*NNNLAA
Trigger: GGCAGCCAGGTTGTTGTTCAAGCTGCCACAGGTGAC...CATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAAGAATTATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000025069.11
ENSMUST00000129435.8
ENSMUST00000151311.8
CDS-3UTR CAA 90 bp GTATCTCTATGGGTTGATTTTATCTTACTACTGGAGAGATGCACTGCCTTTGATCTCGGATCTGGTAAGTaGGCATGTCACCTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: VSLWVDFILLLERCTAFDLGSGK*ACHLWQ
Trigger: CTGCCACAGGTGACATGCCAACTTACCAGATCCGAG...ATCAAAGGCAGTGCATCTCTCCAGTAGTAAGATAAAATCAACCCATAGAGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TGGTTCTATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTCGGATCTGGTAAGTaGGCATGTCACCTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: WFYLKLSSTVAPKDSNTILGSGK*ACHLWQ
Trigger: CTGCCACAGGTGACATGCCAACTTACCAGATCCGAG...TATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATAGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GTTCTATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTCTCGGATCTGGTAAGTaGGCATGTCACCTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: VLFKTVFNCGTQGQQYNTLGSGK*ACHLWQ
Trigger: CTGCCACAGGTGACATGCCAACTTACCAGATCCGAG...AGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTTTACAAAGTGACGATAGCCATCACCACACCTaGTGGCAAAGCAGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: STVAPKDSNTILSLQSDDSHHHT*WQSSSR
Trigger: CCTACTACTGCTTTGCCACAAGGTGTGGTGATGGCT...ATCGTCACTTTGTAAAGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp AACCCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGAGCCATCACCACACCTaGTGGCAAAGCAGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: NPWNSIPNSHSTADCILKSHHHT*WQSSSR
Trigger: CCTACTACTGCTTTGCCACAAGGTGTGGTGATGGCT...CTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000025069.11
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000124747.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000139537.2
ENSMUST00000151084.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GTATCTCTATGGGTTGATTTTATCTTACTACTGGAGAGATGCACTGCCTTTGATGCTCCCGCTTGCGAGTaGCTTCTTCTGCTAGTTGCT +
Preference number: 5 (lower is better)
Translates to: VSLWVDFILLLERCTAFDAPACE*LLLLVA
Trigger: AGCAACTAGCAGAAGAAGCAACTCGCAAGCGGGAGC...ATCAAAGGCAGTGCATCTCTCCAGTAGTAAGATAAAATCAACCCATAGAGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GATTTTATCTTACTACTGGAGAGATGCACTGCCTTTGATCACCCTTTCCTAAAAGCTCCCGCTTGCGAGTaGCTTCTTCTGCTAGTTGCT +
Preference number: 5 (lower is better)
Translates to: DFILLLERCTAFDHPFLKAPACE*LLLLVA
Trigger: AGCAACTAGCAGAAGAAGCAACTCGCAAGCGGGAGC...TTTTAGGAAAGGGTGATCAAAGGCAGTGCATCTCTCCAGTAGTAAGATAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTAGCCTCAGCTCCCGCTaGCGAGTTGCTTCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: YLKLSSTVAPKDSNTILSSLSSR*RVASSA
Trigger: AGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCT...AGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTAGCCTCAGCTCCCGCTaGCGAGTTGCTTCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: CRLYIVLHSKATVHAVISSLSSR*RVASSA
Trigger: AGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCT...ACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151084.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp AATTCATTTGTAGGCTATTCTCACGTAGTCATGTCATCAGGATACACTTCCTTTAGCCTCAGCTCCCGCTaGCGAGTTGCTTCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: NSFVGYSHVVMSSGYTSFSLSSR*RVASSA
Trigger: AGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCT...AAAGGAAGTGTATCCTGATGACATGACTACGTGAGAATAGCCTACAAATGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGAGCCTCAGCTCCCGCTaGCGAGTTGCTTCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: LPAIYCIAFKSNCTCCNQSLSSR*RVASSA
Trigger: AGCAGAAGAAGCAACTCGCAAGCGGGAGCTGAGGCT...CTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151084.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTTTACAAAGTGACAGGTCTTTGAGGGCCTaGAGTTCCTCAATGAGGGTC +
Preference number: 5 (lower is better)
Translates to: SSTVAPKDSNTILSLQSDRSLRA*SSSMRV
Trigger: GACCCTCATTGAGGAACTCAAGGCCCTCAAAGACCT...GTCACTTTGTAAAGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTCAGCAGCCATGTGACTaGGGGCAAGGTCAGTCTCCT +
Preference number: 5 (lower is better)
Translates to: CRLYIVLHSKATVHAVISQQPCD*GQGQSP
Trigger: AGGAGACTGACCTTGCCCCAAGTCACATGGCTGCTG...ACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000150235.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCCAGCAGCCATGTGACTaGGGGCAAGGTCAGTCTCCT +
Preference number: 5 (lower is better)
Translates to: PAIYCIAFKSNCTCCNQFQQPCD*GQGQSP
Trigger: AGGAGACTGACCTTGCCCCAAGTCACATGGCTGCTG...GAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000150235.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp AATTCATTTGTAGGCTATTCTCACGTAGTCATGTCATCAGGATACACTTCCTTTCAGCAGCCATGTGACTaGGGGCAAGGTCAGTCTCCT +
Preference number: 5 (lower is better)
Translates to: NSFVGYSHVVMSSGYTSFQQPCD*GQGQSP
Trigger: AGGAGACTGACCTTGCCCCAAGTCACATGGCTGCTG...AAAGGAAGTGTATCCTGATGACATGACTACGTGAGAATAGCCTACAAATGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GTATTTGCAAGGCTGCTGATCCAGTGTAGCAATAAATTCATACTTGTGGAACTCGTCAGTCTCCTCATCTaGAACAACAACCTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: VFARLLIQCSNKFILVELVSLLI*NNNLAA
Trigger: GGCAGCCAGGTTGTTGTTCAAGATGAGGAGACTGAC...GAGTTCCACAAGTATGAATTTATTGCTACACTGGATCAGCAGCCTTGCAAATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
CDS-3UTR CAA 90 bp GTATTTGCAAGGCTGCTGATCCAGTGTAGCAATAAATTCATACTTGTGGAACTCAGGTCAGTCTCCTCATaGTATTGCCCCGTGCTAGTC +
Preference number: 5 (lower is better)
Translates to: VFARLLIQCSNKFILVELRSVSS*YCPVLV
Trigger: GACTAGCACGGGGCAATACAATGAGGAGACTGACCT...GAGTTCCACAAGTATGAATTTATTGCTACACTGGATCAGCAGCCTTGCAAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS TCA 90 bp AGAGCTATGCTCTGCCACAGAACGTGTTACACTTCGATCCTGCTGTaGTTCAACTGTTTCCATGGTCATTTGCCTTACATTTGTCCTCAT +
Preference number: 5 (lower is better)
Translates to: RAMLCHRTCYTSILL*FNCFHGHLPYICPH
Trigger: ATGAGGACAAATGTAAGGCAAATGACCATGGAAACAGTTGAATCACAGCAGGATCGAAGTGTAACACGTTCTGTGGCAGAGCATAGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000134027.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GCTTCTTGTTCTGAACTTCCAGCACTGCGACTCGACTCTCAAGACACTTCACATTTTTCTTCTTCAATCTaGGGAATACCAGGCACATCA +
Preference number: 5 (lower is better)
Translates to: ASCSELPALRLDSQDTSHFSSSI*GIPGTS
Trigger: TGATGTGCCTGGTATTCCCAAGATTGAAGAAGAAAA...ATGTGAAGTGTCTTGAGAGTCGAGTCGCAGTGCTGGAAGTTCAGAACAAGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GCAACCAACATGGTTCTATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGGAGGAGCTCCTGAATTaGTCATTGTTAATGCCTGGA +
Preference number: 5 (lower is better)
Translates to: ATNMVLFKTVFNCGTQGQEELLN*SLLMPG
Trigger: TCCAGGCATTAACAATGACAAATTCAGGAGCTCCTC...CTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATAGAACCATGTTGGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR CAA 90 bp TTATTGCATAGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCTCGGATCTGGTAAGTaGGCATGTCACCTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: LLHRTLFMTERLGTVNMLLGSGK*ACHLWQ
Trigger: CTGCCACAGGTGACATGCCAACTTACCAGATCCGAG...CAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCTATGCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGCTCGGATCTGGTAAGTaGGCATGTCACCTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: LPAIYCIAFKSNCTCCNQLGSGK*ACHLWQ
Trigger: CTGCCACAGGTGACATGCCAACTTACCAGATCCGAG...CTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151084.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp AATTCATTTGTAGGCTATTCTCACGTAGTCATGTCATCAGGATACACTTCCTTTCTCGGATCTGGTAAGTaGGCATGTCACCTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: NSFVGYSHVVMSSGYTSFLGSGK*ACHLWQ
Trigger: CTGCCACAGGTGACATGCCAACTTACCAGATCCGAG...AAAGGAAGTGTATCCTGATGACATGACTACGTGAGAATAGCCTACAAATGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp AAACTGTCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTTTACAAAGCCATCACCACACCTaGTGGCAAAGCAGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: KLSSTVAPKDSNTILSLQSHHHT*WQSSSR
Trigger: CCTACTACTGCTTTGCCACAAGGTGTGGTGATGGCT...TTGTAAAGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTGCTCCCGCTTGCGAGTaGCTTCTTCTGCTAGTTGCT +
Preference number: 5 (lower is better)
Translates to: CRLYIVLHSKATVHAVISAPACE*LLLLVA
Trigger: AGCAACTAGCAGAAGAAGCAACTCGCAAGCGGGAGC...ACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151084.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGGCTCCCGCTTGCGAGTaGCTTCTTCTGCTAGTTGCT +
Preference number: 5 (lower is better)
Translates to: LPAIYCIAFKSNCTCCNQAPACE*LLLLVA
Trigger: AGCAACTAGCAGAAGAAGCAACTCGCAAGCGGGAGC...CTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151084.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp AATTCATTTGTAGGCTATTCTCACGTAGTCATGTCATCAGGATACACTTCCTTTGCTCCCGCTTGCGAGTaGCTTCTTCTGCTAGTTGCT +
Preference number: 5 (lower is better)
Translates to: NSFVGYSHVVMSSGYTSFAPACE*LLLLVA
Trigger: AGCAACTAGCAGAAGAAGCAACTCGCAAGCGGGAGC...AAAGGAAGTGTATCCTGATGACATGACTACGTGAGAATAGCCTACAAATGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TCAAGACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCAGCTTCCCATCTGTCTCTGCAATaGTTGCTACCTGAGCTAGAG +
Preference number: 5 (lower is better)
Translates to: SRHFTYSFFRRRHSLAASHLSLQ*LLPELE
Trigger: CTCTAGCTCAGGTAGCAACAATTGCAGAGACAGATG...GGAAGCTGCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGTCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000082141.12
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
CDS-3UTR CAA 90 bp ACCCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAGTCTCCTCATTGTATaGCCCCGTGCTAGTCTGATA +
Preference number: 5 (lower is better)
Translates to: THGTVFPIHTLQQTVFLSSLLIV*PRASLI
Trigger: TATCAGACTAGCACGGGGCAATACAATGAGGAGACT...GCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000131899.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAAGGGTTAAGAGACCCACATCTGTCTCTGCAATaGTTGCTACCTGAACAGTTT +
Preference number: 5 (lower is better)
Translates to: PNSHSTADCILKQGLRDPHLSLQ*LLPEQF
Trigger: AAACTGTTCAGGTAGCAACAATTGCAGAGACAGATG...TGGGTCTCTTAACCCTTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp ACCCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAGCTATAGCAATGTATaGCCCCGTGCTAGTCTGATA +
Preference number: 5 (lower is better)
Translates to: THGTVFPIHTLQQTVFLSSYSNV*PRASLI
Trigger: TATCAGACTAGCACGGGGCAATACATTGCTATAGCT...GCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR CAA 90 bp CGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCACTCGGATCTGGTAAGTaGGCATGTCACCTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: RLYIVLHSKATVHAVISSLGSGK*ACHLWQ
Trigger: CTGCCACAGGTGACATGCCAACTTACCAGATCCGAG...TGAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151084.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CTGCTGATCCAGTGTAGCAATAAATTCATACTTGTGGAACTCATTCCAGATAATAGCCATCACCACACCTaGTGGCAAAGCAGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: LLIQCSNKFILVELIPDNSHHHT*WQSSSR
Trigger: CCTACTACTGCTTTGCCACAAGGTGTGGTGATGGCT...ATTATCTGGAATGAGTTCCACAAGTATGAATTTATTGCTACACTGGATCAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TTATTGCATAGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGAGCCATCACCACACCTaGTGGCAAAGCAGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: LLHRTLFMTERLGTVNMLSHHHT*WQSSSR
Trigger: CCTACTACTGCTTTGCCACAAGGTGTGGTGATGGCT...CAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCTATGCAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTAGCCATCACCACACCTaGTGGCAAAGCAGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: CRLYIVLHSKATVHAVISSHHHT*WQSSSR
Trigger: CCTACTACTGCTTTGCCACAAGGTGTGGTGATGGCT...ACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151084.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCAGCCATCACCACACCTaGTGGCAAAGCAGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: PAIYCIAFKSNCTCCNQFSHHHT*WQSSSR
Trigger: CCTACTACTGCTTTGCCACAAGGTGTGGTGATGGCT...GAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000140332.8
ENSMUST00000150235.8
ENSMUST00000151084.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TTATTGCATAGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGAGGTCTTTGAGGGCCTaGAGTTCCTCAATGAGGGTC +
Preference number: 5 (lower is better)
Translates to: LLHRTLFMTERLGTVNMLRSLRA*SSSMRV
Trigger: GACCCTCATTGAGGAACTCAAGGCCCTCAAAGACCT...CAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCTATGCAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTAGGTCAGTCTCCTCATaGTATTGCCCCGTGCTAGTC +
Preference number: 5 (lower is better)
Translates to: CRLYIVLHSKATVHAVISRSVSS*YCPVLV
Trigger: GACTAGCACGGGGCAATACAATGAGGAGACTGACCT...ACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp ACCCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCCTGTCTCTGCAATTGTaGCTACCTGAACAGTTTGTA +
Preference number: 5 (lower is better)
Translates to: THGTVFPIHTLQQTVFLSLSLQL*LPEQFV
Trigger: TACAAACTGTTCAGGTAGCAACAATTGCAGAGACAG...GCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp AGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACCATCTGTCTCTGCAATaGTTGCTACCTGAACAGTTT +
Preference number: 5 (lower is better)
Translates to: RTLFMTERLGTVNMLHWNHLSLQ*LLPEQF
Trigger: AAACTGTTCAGGTAGCAACAATTGCAGAGACAGATG...GTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TCGACTCTCAAGACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCCATCTGTCTCTGCAATaGTTGCTACCTGAACAGTTT +
Preference number: 5 (lower is better)
Translates to: STLKTLHILFLSTSTFFSHLSLQ*LLPEQF
Trigger: AAACTGTTCAGGTAGCAACAATTGCAGAGACAGATG...GCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGTCTTGAGAGTCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTTTACAAAGTGACGATAGCTATAGCAATGTATaGCCCCGTGCTAGTCTGATA +
Preference number: 5 (lower is better)
Translates to: STVAPKDSNTILSLQSDDSYSNV*PRASLI
Trigger: TATCAGACTAGCACGGGGCAATACATTGCTATAGCT...ATCGTCACTTTGTAAAGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR CAA 90 bp GTATTTGCAAGGCTGCTGATCCAGTGTAGCAATAAATTCATACTTGTGGAACTCAGCTATAGCAATGTATaGCCCCGTGCTAGTCTGATA +
Preference number: 5 (lower is better)
Translates to: VFARLLIQCSNKFILVELSYSNV*PRASLI
Trigger: TATCAGACTAGCACGGGGCAATACATTGCTATAGCT...GAGTTCCACAAGTATGAATTTATTGCTACACTGGATCAGCAGCCTTGCAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR CAA 90 bp TGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAAGGGCTGGATTGTTCCACCTaGAGCTATAGCAATGTATTG +
Preference number: 5 (lower is better)
Translates to: WNSIPNSHSTADCILKQGLDCST*SYSNVL
Trigger: CAATACATTGCTATAGCTCAAGGTGGAACAATCCAG...CCCTTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR CAA 90 bp AACCCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGGAGGAGCTCCTGAATTaGTCATTGTTAATGCCTGGA +
Preference number: 5 (lower is better)
Translates to: NPWNSIPNSHSTADCILKEELLN*SLLMPG
Trigger: TCCAGGCATTAACAATGACAAATTCAGGAGCTCCTC...CTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR CAA 90 bp GACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACAAGAGGAGCTCCTGAATTaGTCATTGTTAATGCCTGGA +
Preference number: 5 (lower is better)
Translates to: DTIHDRETGNCKYVALEQEELLN*SLLMPG
Trigger: TCCAGGCATTAACAATGACAAATTCAGGAGCTCCTC...TTGTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR CAA 90 bp CGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCAAGGTCTTTGAGGGCCTaGAGTTCCTCAATGAGGGTC +
Preference number: 5 (lower is better)
Translates to: RLYIVLHSKATVHAVISSRSLRA*SSSMRV
Trigger: GACCCTCATTGAGGAACTCAAGGCCCTCAAAGACCT...TGAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000131899.8
ENSMUST00000151084.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp ATTTGGACACAGTATATAACATTACACACATCCCCAAGGACCCAAGCAGTTATTCATCTGTCTCTGCAATaGTTGCTACCTGAGCTAGAG +
Preference number: 5 (lower is better)
Translates to: IWTQYITLHTSPRTQAVIHLSLQ*LLPELE
Trigger: CTCTAGCTCAGGTAGCAACAATTGCAGAGACAGATG...AATAACTGCTTGGGTCCTTGGGGATGTGTGTAATGTTATATACTGTGTCCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149803.8
CDS-3UTR CAA 90 bp AAACTGTCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTTTACAACATCTGTCTCTGCAATaGTTGCTACCTGAGCTAGAG +
Preference number: 5 (lower is better)
Translates to: KLSSTVAPKDSNTILSLQHLSLQ*LLPELE
Trigger: CTCTAGCTCAGGTAGCAACAATTGCAGAGACAGATG...TTGTAAAGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000082141.12
ENSMUST00000151311.8
ENSMUST00000154135.8
CDS-3UTR CAA 90 bp ATAATTCTTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGGTCAGTCTCCTCATCTaGAACAACAACCTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: IILAGYILYCIQKQLYMLVSLLI*NNNLAA
Trigger: GGCAGCCAGGTTGTTGTTCAAGATGAGGAGACTGAC...CAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAAGAATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
CDS-3UTR CAA 90 bp ACACTTCACATACTCTTTCTTTCGACGTCGACATTCTTTAGCAGCTTCCCTGAATGTTTCCATGGTCATTaGCCTTACATTTGTCCTCAT +
Preference number: 5 (lower is better)
Translates to: TLHILFLSTSTFFSSFPECFHGH*PYICPH
Trigger: ATGAGGACAAATGTAAGGCAAATGACCATGGAAACA...TTCAGGGAAGCTGCTAAAGAATGTCGACGTCGAAAGAAAGAGTATGTGAAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000134027.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CTATGGGTTGATTTTATCTTACTACTGGAGAGATGCACTGCCTTTGATCACCCTTGTTTCCATGGTCATTaGCCTTACATTTGTCCTCAT +
Preference number: 5 (lower is better)
Translates to: LWVDFILLLERCTAFDHPCFHGH*PYICPH
Trigger: ATGAGGACAAATGTAAGGCAAATGACCATGGAAACA...AGGGTGATCAAAGGCAGTGCATCTCTCCAGTAGTAAGATAAAATCAACCCATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TTGCATAGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACCATCTGTCTCTGCAATaGTTGCTACCTGAACAGTTT +
Preference number: 5 (lower is better)
Translates to: LHRTLFMTERLGTVNMLHHLSLQ*LLPEQF
Trigger: AAACTGTTCAGGTAGCAACAATTGCAGAGACAGATG...GTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCTATGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp AGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACTTTTCTTCTTCAATCTaGGGAATACCAGGCACATCA +
Preference number: 5 (lower is better)
Translates to: RTLFMTERLGTVNMLHWNFSSSI*GIPGTS
Trigger: TGATGTGCCTGGTATTCCCAAGATTGAAGAAGAAAA...GTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp ATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACAAGTCTTAAGCTATAGCAATGTATaGCCCCGTGCTAGTCTGATA +
Preference number: 5 (lower is better)
Translates to: IHDRETGNCKYVALEQVLSYSNV*PRASLI
Trigger: TATCAGACTAGCACGGGGCAATACATTGCTATAGCT...TAAGACTTGTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR CAA 90 bp TGGTTCTATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGCAATACAATAAGCTATAGCAATGTATaGCCCCGTGCTAGTCTGATA +
Preference number: 5 (lower is better)
Translates to: WFYLKLSSTVAPKDSNTISYSNV*PRASLI
Trigger: TATCAGACTAGCACGGGGCAATACATTGCTATAGCT...TATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATAGAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR CAA 90 bp AACCCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCTGGATTGTTCCACCTaGAGCTATAGCAATGTATTG +
Preference number: 5 (lower is better)
Translates to: NPWNSIPNSHSTADCILKLDCST*SYSNVL
Trigger: CAATACATTGCTATAGCTCAAGGTGGAACAATCCAG...CTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000152900.8
ENSMUST00000156234.8
CDS-3UTR CAA 90 bp GACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACAACTGGATTGTTCCACCTaGAGCTATAGCAATGTATTG +
Preference number: 5 (lower is better)
Translates to: DTIHDRETGNCKYVALEQLDCST*SYSNVL
Trigger: CAATACATTGCTATAGCTCAAGGTGGAACAATCCAG...TTGTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR CAA 90 bp TCAACTGTGGCACCCAAGGACAGCAATACAATACTTTCTTTACAAAGTGACGATCTGGATTGTTCCACCTaGAGCTATAGCAATGTATTG +
Preference number: 5 (lower is better)
Translates to: STVAPKDSNTILSLQSDDLDCST*SYSNVL
Trigger: CAATACATTGCTATAGCTCAAGGTGGAACAATCCAG...ATCGTCACTTTGTAAAGAAAGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR CAA 90 bp ATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACAAGTCTTAGAGGAGCTCCTGAATTaGTCATTGTTAATGCCTGGA +
Preference number: 5 (lower is better)
Translates to: IHDRETGNCKYVALEQVLEELLN*SLLMPG
Trigger: TCCAGGCATTAACAATGACAAATTCAGGAGCTCCTC...TAAGACTTGTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR CAA 90 bp GTTCTATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTCTGTCTCTGCAATTGTaGCTACCTGAACAGTTTGTA +
Preference number: 5 (lower is better)
Translates to: VLFKTVFNCGTQGQQYNTLSLQL*LPEQFV
Trigger: TACAAACTGTTCAGGTAGCAACAATTGCAGAGACAG...AGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000025069.11
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp ATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCACTGGAACAAGTCTTACATCTGTCTCTGCAATaGTTGCTACCTGAACAGTTT +
Preference number: 5 (lower is better)
Translates to: IHDRETGNCKYVALEQVLHLSLQ*LLPEQF
Trigger: AAACTGTTCAGGTAGCAACAATTGCAGAGACAGATG...TAAGACTTGTTCCAGTGCAACATATTTACAGTTCCCAGTCTCTCTGTCATGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CCATGGAACAGTATTCCCAATTCACACTCTACAGCAGACTGTATTCTTAAGCAATTTTCTTCTTCAATCTaGGGAATACCAGGCACATCA +
Preference number: 5 (lower is better)
Translates to: PWNSIPNSHSTADCILKQFSSSI*GIPGTS
Trigger: TGATGTGCCTGGTATTCCCAAGATTGAAGAAGAAAA...TTGCTTAAGAATACAGTCTGCTGTAGAGTGTGAATTGGGAATACTGTTCCATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000137568.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TTGGACACAGTATATAACATTACACACATCCCCAAGGACCCAAGCAGTTATTTCTTTTCTTCTTCAATCTaGGGAATACCAGGCACATCA +
Preference number: 5 (lower is better)
Translates to: LDTVYNITHIPKDPSSYFFSSSI*GIPGTS
Trigger: TGATGTGCCTGGTATTCCCAAGATTGAAGAAGAAAA...GAAATAACTGCTTGGGTCCTTGGGGATGTGTGTAATGTTATATACTGTGTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149803.8
CDS-3UTR CAA 90 bp TTATTGCATAGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGAGCTATAGCAATGTATaGCCCCGTGCTAGTCTGATA +
Preference number: 5 (lower is better)
Translates to: LLHRTLFMTERLGTVNMLSYSNV*PRASLI
Trigger: TATCAGACTAGCACGGGGCAATACATTGCTATAGCT...CAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCTATGCAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR CAA 90 bp GTTCTATTTAAAACTGTCTTCAACTGTGGCACCCAAGGACAGCAATACAATACTCTGGATTGTTCCACCTaGAGCTATAGCAATGTATTG +
Preference number: 5 (lower is better)
Translates to: VLFKTVFNCGTQGQQYNTLDCST*SYSNVL
Trigger: CAATACATTGCTATAGCTCAAGGTGGAACAATCCAG...AGTATTGTATTGCTGTCCTTGGGTGCCACAGTTGAAGACAGTTTTAAATAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR CAA 90 bp CGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCACATCTGTCTCTGCAATaGTTGCTACCTGAGCTAGAG +
Preference number: 5 (lower is better)
Translates to: RLYIVLHSKATVHAVISSHLSLQ*LLPELE
Trigger: CTCTAGCTCAGGTAGCAACAATTGCAGAGACAGATG...TGAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000082141.12
ENSMUST00000130599.8
ENSMUST00000151311.8
ENSMUST00000154135.8
CDS-3UTR CAA 90 bp CAGCAAAGCAGCACAAACTTTTGTAGAAATTCACATACTACATACATAGTAGGACATCTGTCTCTGCAATaGTTGCTACCTGAGCTAGAG +
Preference number: 5 (lower is better)
Translates to: QQSSTNFCRNSHTTYIVGHLSLQ*LLPELE
Trigger: CTCTAGCTCAGGTAGCAACAATTGCAGAGACAGATG...TCCTACTATGTATGTAGTATGTGAATTTCTACAAAAGTTTGTGCTGCTTTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000082141.12
ENSMUST00000151311.8
ENSMUST00000154135.8
CDS-3UTR CAA 90 bp CGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCAAGTCTCCTCATTGTATaGCCCCGTGCTAGTCTGATA +
Preference number: 5 (lower is better)
Translates to: RLYIVLHSKATVHAVISSSLLIV*PRASLI
Trigger: TATCAGACTAGCACGGGGCAATACAATGAGGAGACT...TGAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CTGCTGATCCAGTGTAGCAATAAATTCATACTTGTGGAACTCATTCCAGATAATCTGTCTCTGCAATTGTaGCTACCTGAACAGTTTGTA +
Preference number: 5 (lower is better)
Translates to: LLIQCSNKFILVELIPDNLSLQL*LPEQFV
Trigger: TACAAACTGTTCAGGTAGCAACAATTGCAGAGACAG...ATTATCTGGAATGAGTTCCACAAGTATGAATTTATTGCTACACTGGATCAGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000025069.11
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TTATTGCATAGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGCATCTGTCTCTGCAATaGTTGCTACCTGAACAGTTT +
Preference number: 5 (lower is better)
Translates to: LLHRTLFMTERLGTVNMLHLSLQ*LLPEQF
Trigger: AAACTGTTCAGGTAGCAACAATTGCAGAGACAGATG...CAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCTATGCAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000025069.11
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GCCATAATTCTTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGGATTGTTCCACCTaGAGCTATAGCAATGTATTG +
Preference number: 5 (lower is better)
Translates to: AIILAGYILYCIQKQLYMLDCST*SYSNVL
Trigger: CAATACATTGCTATAGCTCAAGGTGGAACAATCCAG...CATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAAGAATTATGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR CAA 90 bp ATAATTCTTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGGAGGAGCTCCTGAATTaGTCATTGTTAATGCCTGGA +
Preference number: 5 (lower is better)
Translates to: IILAGYILYCIQKQLYMLEELLN*SLLMPG
Trigger: TCCAGGCATTAACAATGACAAATTCAGGAGCTCCTC...CAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAAGAATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR CAA 90 bp TTATTGCATAGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGTGTTTCCATGGTCATTaGCCTTACATTTGTCCTCAT +
Preference number: 5 (lower is better)
Translates to: LLHRTLFMTERLGTVNMLCFHGH*PYICPH
Trigger: ATGAGGACAAATGTAAGGCAAATGACCATGGAAACA...CAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCTATGCAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp CAGCAAAGCAGCACAAACTTTTGTAGAAATTCACATACTACATACATAGTAGGACTGTCTCTGCAATTGTaGCTACCTGAACAGTTTGTA +
Preference number: 5 (lower is better)
Translates to: QQSSTNFCRNSHTTYIVGLSLQL*LPEQFV
Trigger: TACAAACTGTTCAGGTAGCAACAATTGCAGAGACAG...TCCTACTATGTATGTAGTATGTGAATTTCTACAAAAGTTTGTGCTGCTTTGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000025069.11
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp AATTCATTTGTAGGCTATTCTCACGTAGTCATGTCATCAGGATACACTTCCTTTTTTTCTTCTTCAATCTaGGGAATACCAGGCACATCA +
Preference number: 5 (lower is better)
Translates to: NSFVGYSHVVMSSGYTSFFSSSI*GIPGTS
Trigger: TGATGTGCCTGGTATTCCCAAGATTGAAGAAGAAAA...AAAGGAAGTGTATCCTGATGACATGACTACGTGAGAATAGCCTACAAATGAATT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 7 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TTATTGCATAGGACACTATTCATGACAGAGAGACTGGGAACTGTAAATATGTTGTTTTCTTCTTCAATCTaGGGAATACCAGGCACATCA +
Preference number: 5 (lower is better)
Translates to: LLHRTLFMTERLGTVNMLFSSSI*GIPGTS
Trigger: TGATGTGCCTGGTATTCCCAAGATTGAAGAAGAAAA...CAACATATTTACAGTTCCCAGTCTCTCTGTCATGAATAGTGTCCTATGCAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp TGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTTTTCTTCTTCAATCTaGGGAATACCAGGCACATCA +
Preference number: 5 (lower is better)
Translates to: CRLYIVLHSKATVHAVISFSSSI*GIPGTS
Trigger: TGATGTGCCTGGTATTCCCAAGATTGAAGAAGAAAA...ACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp GCCATAATTCTTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGTTTTCTTCTTCAATCTaGGGAATACCAGGCACATCA +
Preference number: 5 (lower is better)
Translates to: AIILAGYILYCIQKQLYMFSSSI*GIPGTS
Trigger: TGATGTGCCTGGTATTCCCAAGATTGAAGAAGAAAA...CATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAAGAATTATGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000131899.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS-3UTR CAA 90 bp ATAATTCTTGCCGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGCTGGATTGTTCCACCTaGAGCTATAGCAATGTATTG +
Preference number: 5 (lower is better)
Translates to: IILAGYILYCIQKQLYMLLDCST*SYSNVL
Trigger: CAATACATTGCTATAGCTCAAGGTGGAACAATCCAG...CAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCGGCAAGAATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000150235.8
ENSMUST00000151311.8
CDS-3UTR CAA 90 bp CGGCTATATATTGTATTGCATTCAAAAGCAACTGTACATGCTGTAATCAGTTCATTTTCTTCTTCAATCTaGGGAATACCAGGCACATCA +
Preference number: 5 (lower is better)
Translates to: RLYIVLHSKATVHAVISSFSSSI*GIPGTS
Trigger: TGATGTGCCTGGTATTCCCAAGATTGAAGAAGAAAA...TGAACTGATTACAGCATGTACAGTTGCTTTTGAATGCAATACAATATATAGCCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000129435.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS CAA 90 bp GGATCTGGTAAGTTGGCATGTCACCTGTGGCAGCAGCCATGTGACTaGGGGCAAGGTCAGTCTCCTCATCTTGAACAACAACCTGGCTGC +
Preference number: 6 (lower is better)
Translates to: GSGKLACHLWQQPCD*GQGQSPHLEQQPGC
Trigger: GCAGCCAGGTTGTTGTTCAAGATGAGGAGACTGACCTTGCCCCAAGTCACATGGCTGCTGCCACAGGTGACATGCCAACTTACCAGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000126578.8
ENSMUST00000144496.8
ENSMUST00000150235.8
ENSMUST00000152900.8
ENSMUST00000154715.8
ENSMUST00000156234.8
CDS CCA 72 bp TGGCAAAGCAGTAGTAGGAGCTCGGATCTGGTAAGTTaGCATGTCACCTGTGGCAGCAGCCATGTGACTTGG +
Preference number: 6 (lower is better)
Translates to: WQSSSRSSDLVS*HVTCGSSHVTW
Trigger: CCAAGTCACATGGCTGCTGCCACAGGTGACATGCCAACTTACCAGATCCGAGCTCCTACTACTGCTTTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000049942.13
ENSMUST00000082141.12
ENSMUST00000122958.8
ENSMUST00000126578.8
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000144496.8
ENSMUST00000147138.8
ENSMUST00000148305.2
ENSMUST00000150235.8
ENSMUST00000152108.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154705.8
ENSMUST00000154715.8
ENSMUST00000156234.8
ENSMUST00000165086.8
CDS CAA 90 bp GGCAGCAGCCATGTGACTTGGGGCAAGGTCAGTCTCCTCATTGTATaGCCCCGTGCTAGTCTGATATATGCTAGTTGGTACTGCCATGGT +
Preference number: 6 (lower is better)
Translates to: GSSHVTWGKVSLLIV*PRASLIYASWYCHG
Trigger: ACCATGGCAGTACCAACTAGCATATATCAGACTAGCACGGGGCAATACAATGAGGAGACTGACCTTGCCCCAAGTCACATGGCTGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000152108.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS CAA 90 bp GGATCTGGTAAGTTGGCATGTCACCTGTGGCAGCAGCCATGTGACTaGGGGCAAGGTCAGTCTCCTCATCAGTTTCATCTCCAGTTACAG +
Preference number: 6 (lower is better)
Translates to: GSGKLACHLWQQPCD*GQGQSPHQFHLQLQ
Trigger: CTGTAACTGGAGATGAAACTGATGAGGAGACTGACCTTGCCCCAAGTCACATGGCTGCTGCCACAGGTGACATGCCAACTTACCAGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147138.8
ENSMUST00000154705.8
CDS CCA 72 bp TGGCAAAGCAGTAGTAGGAGCTCGGATCTGGTAAGTTaGCATGTCACCTGTGGCAGCTTGAACAACAACCTG +
Preference number: 6 (lower is better)
Translates to: WQSSSRSSDLVS*HVTCGSLNNNL
Trigger: CAGGTTGTTGTTCAAGCTGCCACAGGTGACATGCCAACTTACCAGATCCGAGCTCCTACTACTGCTTTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000025069.11
ENSMUST00000127601.8
ENSMUST00000129435.8
ENSMUST00000130455.8
ENSMUST00000136961.8
ENSMUST00000151311.8
CDS CCA 72 bp TGGCAAAGCAGTAGTAGGAGCTCGGATCTGGTAAGTTaGCATGTCACCTGTGGCAGCAGTTTCATCTCCAGT +
Preference number: 6 (lower is better)
Translates to: WQSSSRSSDLVS*HVTCGSSFISS
Trigger: ACTGGAGATGAAACTGCTGCCACAGGTGACATGCCAACTTACCAGATCCGAGCTCCTACTACTGCTTTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140332.8
ENSMUST00000151084.8
CDS GCA 72 bp ACTGTACTAGAGTCACAGCTGGGGAGCCTCTTCCAGTaGCTGATCCAGCTACAGAAACCTTTTTATCCAGAT +
Preference number: 6 (lower is better)
Translates to: TVLESQLGSLFQ*LIQLQKPFYPD
Trigger: ATCTGGATAAAAAGGTTTCTGTAGCTGGATCAGGCACTGGAAGAGGCTCCCCAGCTGTGACTCTAGTACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000154715.8
CDS CAA 72 bp CATGTGACTTGGGGCAAGGTCAGTCTCCTCATTGTATaGCCCCGTGCTAGTCTGATATATGCTAGTTGGTAC +
Preference number: 6 (lower is better)
Translates to: HVTWGKVSLLIV*PRASLIYASWY
Trigger: GTACCAACTAGCATATATCAGACTAGCACGGGGCAATACAATGAGGAGACTGACCTTGCCCCAAGTCACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000152108.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS TCA 72 bp AGGTCAGTCTCCTCATTGTATTGCCCCGTGCTAGTCTaGTATATGCTAGTTGGTACTGCCATGGTAGCAATG +
Preference number: 6 (lower is better)
Translates to: RSVSSLYCPVLV*YMLVGTAMVAM
Trigger: CATTGCTACCATGGCAGTACCAACTAGCATATATCAGACTAGCACGGGGCAATACAATGAGGAGACTGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130599.8
ENSMUST00000131899.8
ENSMUST00000152108.8
ENSMUST00000154135.8
ENSMUST00000165086.8
CDS GCA 72 bp CTATGCTCTGCCACAGAACGTGTTACACTTCGATCCTaGTGTGATTCAACTGTTTCCATGGTCATTTGCCTT +
Preference number: 6 (lower is better)
Translates to: LCSATERVTLRS*CDSTVSMVICL
Trigger: AAGGCAAATGACCATGGAAACAGTTGAATCACAGCAGGATCGAAGTGTAACACGTTCTGTGGCAGAGCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000134027.8
ENSMUST00000137568.8
ENSMUST00000146265.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS TCA 72 bp CTCTGCCACAGAACGTGTTACACTTCGATCCTGCTGTaGTTCAACTGTTTCCATGGTCATTTGCCTTACATT +
Preference number: 6 (lower is better)
Translates to: LCHRTCYTSILL*FNCFHGHLPYI
Trigger: AATGTAAGGCAAATGACCATGGAAACAGTTGAATCACAGCAGGATCGAAGTGTAACACGTTCTGTGGCAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000025069.11
ENSMUST00000082141.12
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000134027.8
ENSMUST00000137568.8
ENSMUST00000146265.8
ENSMUST00000150235.8
ENSMUST00000151311.8
ENSMUST00000152900.8
ENSMUST00000154135.8
ENSMUST00000154470.8
ENSMUST00000165086.8
CDS TCA 72 bp TGCAATTGTTGCTACCTGAACAGTTTGTATTTGTGGTaGTTGAATAACCGATGGATGTGGTGTCTGAATAAC +
Preference number: 6 (lower is better)
Translates to: CNCCYLNSLYLW*LNNRWMWCLNN
Trigger: GTTATTCAGACACCACATCCATCGGTTATTCAATCACCACAAATACAAACTGTTCAGGTAGCAACAATTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000025069.11
ENSMUST00000122958.8
ENSMUST00000126578.8
ENSMUST00000127601.8
ENSMUST00000130455.8
ENSMUST00000131899.8
ENSMUST00000142690.2
ENSMUST00000146265.8
ENSMUST00000150235.8
ENSMUST00000154470.8
ENSMUST00000154715.8
ENSMUST00000156234.8
ENSMUST00000165086.8