Pregenerated sensors for CREG2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050967Ensembl transcript IDs: ENSMUST00000053355.6
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAGTGAGCCGACTCTCAGGCTCCTTCTGCCTTTGCTTTCTCCCTTaGATTCTTCCCTCTGTCTTTGCTACACCGTGTGGAAGGAGGCGC | + |
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Preference number: 1 (lower is better) Translates to: AVSRLSGSFCLCFLP*ILPSVFATPCGRRR Trigger: GCGCCTCCTTCCACACGGTGTAGCAAAGACAGAGGGAAGAATGCAAGGGAGAAAGCAAAGGCAGAAGGAGCCTGAGAGTCGGCTCACTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR CCA 90 bp | AAAACCCCACTAAGCCCATTTATTCTGTGCATGTGTGTGCAGCCGTaGTTGCAGCTGGCAGCCAGGAACAGGGTCCCTTGCACTCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: KTPLSPFILCMCVQP*LQLAARNRVPCTPA Trigger: GGCAGGAGTGCAAGGGACCCTGTTCCTGGCTGCCAGCTGCAACCACGGCTGCACACACATGCACAGAATAAATGGGCTTAGTGGGGTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR GCA 90 bp | GCCGTGGTTGCAGCTGGCAGCCAGGAACAGGGTCCCTTGCACTCCTaGCGCAGTTGGGCTGGAATTTACAACAGTATTTCTAGGTCAGTA | + |
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Preference number: 1 (lower is better) Translates to: AVVAAGSQEQGPLHS*RSWAGIYNSISRSV Trigger: TACTGACCTAGAAATACTGTTGTAAATTCCAGCCCAACTGCGGCAGGAGTGCAAGGGACCCTGTTCCTGGCTGCCAGCTGCAACCACGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR GCA 90 bp | TGTGTGCAGCCGTGGTTGCAGCTGGCAGCCAGGAACAGGGTCCCTTaGACTCCTGCCGCAGTTGGGCTGGAATTTACAACAGTATTTCTA | + |
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Preference number: 1 (lower is better) Translates to: CVQPWLQLAARNRVP*TPAAVGLEFTTVFL Trigger: TAGAAATACTGTTGTAAATTCCAGCCCAACTGCGGCAGGAGTGCAAGGGACCCTGTTCCTGGCTGCCAGCTGCAACCACGGCTGCACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR TCA 90 bp | TTAAGTGAGGTGATTCTATTGAGGGTCTGGCCTGAGGCTAGGCAGTaGGCCGACTCTCAGGCTCCTTCTGCCTTTGCTTTCTCCCTTGCA | + |
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Preference number: 1 (lower is better) Translates to: LSEVILLRVWPEARQ*ADSQAPSAFAFSLA Trigger: TGCAAGGGAGAAAGCAAAGGCAGAAGGAGCCTGAGAGTCGGCTCACTGCCTAGCCTCAGGCCAGACCCTCAATAGAATCACCTCACTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR GCA 90 bp | CCAACCCCACAGCCACGCTGTGTGATGCACGCCCAGCTCTTTTTATaGAACGAGCTTCCATCCAAAGCACGACTTGTGGATGGTAAGCAA | + |
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Preference number: 1 (lower is better) Translates to: PTPQPRCVMHAQLFL*NELPSKARLVDGKQ Trigger: TTGCTTACCATCCACAAGTCGTGCTTTGGATGGAAGCTCGTTGCATAAAAAGAGCTGGGCGTGCATCACACAGCGTGGCTGTGGGGTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR CCA 90 bp | CTTGGAACTGGAGTTCCAGACAGTTGTGAGCTGCCGTGTGGGTTCTaGGAATTGAACCTGGATCCTTTGGAAGAGCAGCCAGTGCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: LGTGVPDSCELPCGF*ELNLDPLEEQPVLL Trigger: TAAGAGCACTGGCTGCTCTTCCAAAGGATCCAGGTTCAATTCCCAGAACCCACACGGCAGCTCACAACTGTCTGGAACTCCAGTTCCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR GCA 90 bp | TGTTCTGCTGTAGTCTGCTCACACAGAGCAGGCCATGCACAAACCTaGATGTGCTTACTCTATTTGCTATGCCACAGTGGGAGAAAGGCT | + |
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Preference number: 1 (lower is better) Translates to: CSAVVCSHRAGHAQT*MCLLYLLCHSGRKA Trigger: AGCCTTTCTCCCACTGTGGCATAGCAAATAGAGTAAGCACATGCAGGTTTGTGCATGGCCTGCTCTGTGTGAGCAGACTACAGCAGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR GCA 90 bp | TGCTTCATGCTCAGCAAAGGCTCTGCTGAAAGGTACCCCAGCCCCTaGCAGGTGCTTAGTCATTTGTGTTCAGCATTAAATTGGATACAT | + |
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Preference number: 1 (lower is better) Translates to: CFMLSKGSAERYPSP*QVLSHLCSALNWIH Trigger: ATGTATCCAATTTAATGCTGAACACAAATGACTAAGCACCTGGCAGGGGCTGGGGTACCTTTCAGCAGAGCCTTTGCTGAGCATGAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR CCA 90 bp | CAGCTGGGCACCCTTCAAACAAAGAGACGGCAGTCAGAGACTGTCTaGCTTCTTTACTTCAAAGGTCTTCATTTTGATGCAAACCCCAAG | + |
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Preference number: 1 (lower is better) Translates to: QLGTLQTKRRQSETV*LLYFKGLHFDANPK Trigger: CTTGGGGTTTGCATCAAAATGAAGACCTTTGAAGTAAAGAAGCCAGACAGTCTCTGACTGCCGTCTCTTTGTTTGAAGGGTGCCCAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR TCA 90 bp | GTACTAGGAATGAAACAGTCTTTGATGAAACAGACATACCTGGTGTaGAAACAGACTTTGTGCTCTCCGTGCAGTACCCGGGACAGACAA | + |
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Preference number: 1 (lower is better) Translates to: VLGMKQSLMKQTYLV*KQTLCSPCSTRDRQ Trigger: TTGTCTGTCCCGGGTACTGCACGGAGAGCACAAAGTCTGTTTTCACACCAGGTATGTCTGTTTCATCAAAGACTGTTTCATTCCTAGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR CCA 90 bp | TTAGAGGAAAACTTTGTGAAGTCATGTCTCTCTTCCCACCATTATTaGTGGGTTTCAGGAATTGAACTCAGGTCATCAGAGCTGCTTGGT | + |
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Preference number: 1 (lower is better) Translates to: LEENFVKSCLSSHHY*WVSGIELRSSELLG Trigger: ACCAAGCAGCTCTGATGACCTGAGTTCAATTCCTGAAACCCACCAATAATGGTGGGAAGAGAGACATGACTTCACAAAGTTTTCCTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR TCA 90 bp | ACCTCCCACGTGTTGGGATTAAAGACATGCAGCATCATGCCCAGCTaGTTCCAGTTTTCTCATGTTAAGGATAATTCATGTGTAAGTGTT | + |
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Preference number: 1 (lower is better) Translates to: TSHVLGLKTCSIMPS*FQFSHVKDNSCVSV Trigger: AACACTTACACATGAATTATCCTTAACATGAGAAAACTGGAATCAGCTGGGCATGATGCTGCATGTCTTTAATCCCAACACGTGGGAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR CCA 90 bp | GAGACCCTATATTCATCTTACCCAGTTTCCAATTTAATAATGATTTaGTTCAAGGTAGGGGGCTTCCATCACTGTAAGAATCCGTCATTA | + |
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Preference number: 1 (lower is better) Translates to: ETLYSSYPVSNLIMI*FKVGGFHHCKNPSL Trigger: TAATGACGGATTCTTACAGTGATGGAAGCCCCCTACCTTGAACCAAATCATTATTAAATTGGAAACTGGGTAAGATGAATATAGGGTCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR CCA 90 bp | ACAAATTGCCTGAAGAGGGACCATCTGATTCAAGCCCATTGTTCTTaGTGTCCAGACCATTCAGATTTCATTTCTTGTAATTTTGATAAA | + |
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Preference number: 1 (lower is better) Translates to: TNCLKRDHLIQAHCS*CPDHSDFISCNFDK Trigger: TTTATCAAAATTACAAGAAATGAAATCTGAATGGTCTGGACACCAAGAACAATGGGCTTGAATCAGATGGTCCCTCTTCAGGCAATTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR CCA 90 bp | CTTGTATCAGTAATTAGCTCCTTTATATTGTTGAGTACTATTCTATaGTATAGATATACCACAATTGGTCTCGCCAGACACCAGATCAAA | + |
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Preference number: 1 (lower is better) Translates to: LVSVISSFILLSTIL*YRYTTIGLARHQIK Trigger: TTTGATCTGGTGTCTGGCGAGACCAATTGTGGTATATCTATACCATAGAATAGTACTCAACAATATAAAGGAGCTAATTACTGATACAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR-3UTR CCA 90 bp | CATGTGTGTGCAGCCGTGGTTGCAGCTGGCAGCCAGGAACAGGGTCCCTTGCACTGGCGGTGTGTGCTCTaGTCCAGTCAGGCCCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: HVCAAVVAAGSQEQGPLHWRCVL*SSQAPG Trigger: ACCTGGGGCCTGACTGGACCAGAGCACACACCGCCA...GTGCAAGGGACCCTGTTCCTGGCTGCCAGCTGCAACCACGGCTGCACACACATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR-3UTR TCA 90 bp | CATGTGTGTGCAGCCGTGGTTGCAGCTGGCAGCCAGGAACAGGGTCCCTTGCACCACAGCCACGCTGTGTaGTGCACGCCCAGCTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: HVCAAVVAAGSQEQGPLHHSHAV*CTPSSF Trigger: AAAAGAGCTGGGCGTGCATCACACAGCGTGGCTGTG...GTGCAAGGGACCCTGTTCCTGGCTGCCAGCTGCAACCACGGCTGCACACACATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR-3UTR GCA 90 bp | ATGCTCAGCAAAGGCTCTGCTGAAAGGTACCCCAGCCCCTGCCAGGTGCTTAGTGGCCTTGGCGGTGTGTaGTCTGGTCCAGTCAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: MLSKGSAERYPSPCQVLSGLGGV*SGPVRP Trigger: GGGCCTGACTGGACCAGAGCACACACCGCCAAGGCC...ACTAAGCACCTGGCAGGGGCTGGGGTACCTTTCAGCAGAGCCTTTGCTGAGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR CAA 90 bp | GGCAGTGAGCCGACTCTCAGGCTCCTTCTGCCTTTGCTTTCTCCCTaGCATTCTTCCCTCTGTCTTTGCTACACCGTGTGGAAGGAGGCG | + |
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Preference number: 2 (lower is better) Translates to: GSEPTLRLLLPLLSP*HSSLCLCYTVWKEA Trigger: CGCCTCCTTCCACACGGTGTAGCAAAGACAGAGGGAAGAATGCAAGGGAGAAAGCAAAGGCAGAAGGAGCCTGAGAGTCGGCTCACTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR-3UTR TCA 90 bp | CATGTGTGTGCAGCCGTGGTTGCAGCTGGCAGCCAGGAACAGGGTCCCTTGCACGAAAGGCTCCCCAAGTaGCCTGTACATTCTAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: HVCAAVVAAGSQEQGPLHERLPK*PVHSRK Trigger: TTTTCTAGAATGTACAGGTCACTTGGGGAGCCTTTC...GTGCAAGGGACCCTGTTCCTGGCTGCCAGCTGCAACCACGGCTGCACACACATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR-3UTR TCA 90 bp | ATGCTCAGCAAAGGCTCTGCTGAAAGGTACCCCAGCCCCTGCCAGGTGCTTAGTGTGGGTTCTGGGAATTaGACCTGGATCCTTTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: MLSKGSAERYPSPCQVLSVGSGN*TWILWK Trigger: CTTCCAAAGGATCCAGGTTCAATTCCCAGAACCCAC...ACTAAGCACCTGGCAGGGGCTGGGGTACCTTTCAGCAGAGCCTTTGCTGAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR-3UTR CCA 90 bp | CATGTGTGTGCAGCCGTGGTTGCAGCTGGCAGCCAGGAACAGGGTCCCTTGCACCTAGCTTTGTGTTTGTaGCAAGCCATGACAAACTCA | + |
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Preference number: 2 (lower is better) Translates to: HVCAAVVAAGSQEQGPLHLALCL*QAMTNS Trigger: TGAGTTTGTCATGGCTTGCCACAAACACAAAGCTAG...GTGCAAGGGACCCTGTTCCTGGCTGCCAGCTGCAACCACGGCTGCACACACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR-3UTR TCA 90 bp | ATGCTCAGCAAAGGCTCTGCTGAAAGGTACCCCAGCCCCTGCCAGGTGCTTAGTGAACACCACACTTCCTaGATAGTAGAGGGGCACTTT | + |
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Preference number: 2 (lower is better) Translates to: MLSKGSAERYPSPCQVLSEHHTS*IVEGHF Trigger: AAAGTGCCCCTCTACTATTCAGGAAGTGTGGTGTTC...ACTAAGCACCTGGCAGGGGCTGGGGTACCTTTCAGCAGAGCCTTTGCTGAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR-3UTR GCA 90 bp | GGTTGCACCCCTGCTTCATGCTCAGCAAAGGCTCTGCTGAAAGGTACCCCAGCCGCCCAGCTCTTTTTATaGAACGAGCTTCCATCCAAA | + |
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Preference number: 2 (lower is better) Translates to: GCTPASCSAKALLKGTPAAQLFL*NELPSK Trigger: TTTGGATGGAAGCTCGTTGCATAAAAAGAGCTGGGC...GGCTGGGGTACCTTTCAGCAGAGCCTTTGCTGAGCATGAAGCAGGGGTGCAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR CAA 90 bp | AGTTGTGAGCTGCCGTGTGGGTTCTGGGAATTGAACCTGGATCCTTaGGAAGAGCAGCCAGTGCTCTTAACAGCTGAACCATCTCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: SCELPCGFWELNLDP*EEQPVLLTAEPSLQ Trigger: CTGGAGAGATGGTTCAGCTGTTAAGAGCACTGGCTGCTCTTCCAAAGGATCCAGGTTCAATTCCCAGAACCCACACGGCAGCTCACAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR-3UTR TCA 90 bp | ATGCTCAGCAAAGGCTCTGCTGAAAGGTACCCCAGCCCCTGCCAGGTGCTTAGTTGCTGGGAACTCTTGTaGGCTGGCTTATGTCAAATA | + |
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Preference number: 2 (lower is better) Translates to: MLSKGSAERYPSPCQVLSCWELL*AGLCQI Trigger: TATTTGACATAAGCCAGCTCACAAGAGTTCCCAGCA...ACTAAGCACCTGGCAGGGGCTGGGGTACCTTTCAGCAGAGCCTTTGCTGAGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR CAA 90 bp | TCACACAGAGCAGGCCATGCACAAACCTGCATGTGCTTACTCTATTaGCTATGCCACAGTGGGAGAAAGGCTCCCCAAGTGACCTGTACA | + |
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Preference number: 2 (lower is better) Translates to: SHRAGHAQTCMCLLY*LCHSGRKAPQVTCT Trigger: TGTACAGGTCACTTGGGGAGCCTTTCTCCCACTGTGGCATAGCAAATAGAGTAAGCACATGCAGGTTTGTGCATGGCCTGCTCTGTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR-3UTR CCA 90 bp | GGTTGCACCCCTGCTTCATGCTCAGCAAAGGCTCTGCTGAAAGGTACCCCAGCCTCTTCCCACCATTATTaGTGGGTTTCAGGAATTGAA | + |
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Preference number: 2 (lower is better) Translates to: GCTPASCSAKALLKGTPASSHHY*WVSGIE Trigger: TTCAATTCCTGAAACCCACCAATAATGGTGGGAAGA...GGCTGGGGTACCTTTCAGCAGAGCCTTTGCTGAGCATGAAGCAGGGGTGCAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR-3UTR TCA 90 bp | GGTTGCACCCCTGCTTCATGCTCAGCAAAGGCTCTGCTGAAAGGTACCCCAGCCGCGAGAATGTCTACTTaGGTTTTCCCATTAAATAGT | + |
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Preference number: 2 (lower is better) Translates to: GCTPASCSAKALLKGTPAARMST*VFPLNS Trigger: ACTATTTAATGGGAAAACTCAAGTAGACATTCTCGC...GGCTGGGGTACCTTTCAGCAGAGCCTTTGCTGAGCATGAAGCAGGGGTGCAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR-3UTR TCA 90 bp | GGTTGCACCCCTGCTTCATGCTCAGCAAAGGCTCTGCTGAAAGGTACCCCAGCCTCTTGTCTCCTCTCTTaGTATATTTTGGGAACAGTT | + |
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Preference number: 2 (lower is better) Translates to: GCTPASCSAKALLKGTPASCLLS*YILGTV Trigger: AACTGTTCCCAAAATATATCAAGAGAGGAGACAAGA...GGCTGGGGTACCTTTCAGCAGAGCCTTTGCTGAGCATGAAGCAGGGGTGCAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR-3UTR TCA 90 bp | ATGCTCAGCAAAGGCTCTGCTGAAAGGTACCCCAGCCCCTGCCAGGTGCTTAGTCTACCACTTCCATTTTaGCAACCAAGATTTCCAAAT | + |
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Preference number: 2 (lower is better) Translates to: MLSKGSAERYPSPCQVLSLPLPF*QPRFPN Trigger: ATTTGGAAATCTTGGTTGTCAAAATGGAAGTGGTAG...ACTAAGCACCTGGCAGGGGCTGGGGTACCTTTCAGCAGAGCCTTTGCTGAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR-3UTR GCA 90 bp | GGTTGCACCCCTGCTTCATGCTCAGCAAAGGCTCTGCTGAAAGGTACCCCAGCCGGAATGTCTCTTCTCTaGTACATTTTGATATGTAGT | + |
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Preference number: 2 (lower is better) Translates to: GCTPASCSAKALLKGTPAGMSLL*YILICS Trigger: ACTACATATCAAAATGTAGCAGAGAAGAGACATTCC...GGCTGGGGTACCTTTCAGCAGAGCCTTTGCTGAGCATGAAGCAGGGGTGCAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR-3UTR TCA 90 bp | AAGAGTCCATGGCTCCCGCAGATGTGTGTATATATATTAGTGATTAACAAGGGGGCCCACTGTGTGCGGTaGACACACAATGATCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: KSPWLPQMCVYILVINKGAHCVR*THNDLG Trigger: CCCAAGATCATTGTGTGTTCACCGCACACAGTGGGC...CCCCTTGTTAATCACTAATATATATACACACATCTGCGGGAGCCATGGACTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR-3UTR TCA 90 bp | AAGCACGGAAGTTGTACTAGGAATGAAACAGTCTTTGATGAAACAGACATACCTCAGCAAAGGCTCTGCTaGAAGGTACCCCAGCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: KHGSCTRNETVFDETDIPQQRLC*KVPQPL Trigger: CAGGGGCTGGGGTACCTTTCAGCAGAGCCTTTGCTG...AGGTATGTCTGTTTCATCAAAGACTGTTTCATTCCTAGTACAACTTCCGTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR-3UTR GCA 90 bp | GCAGCTTGTTCTTCCGGCCCTCCACCTTCTTCTAAATTGGGAGTAGCAATAAATTGTTCTGCTGTAGTCTaGTCACACAGAGCAGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: AACSSGPPPSSKLGVAINCSAVV*SHRAGH Trigger: ATGGCCTGCTCTGTGTGAGCAGACTACAGCAGAACA...ATTTATTGCTACTCCCAATTTAGAAGAAGGTGGAGGGCCGGAAGAACAAGCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR-3UTR GCA 90 bp | GCAGCTTGTTCTTCCGGCCCTCCACCTTCTTCTAAATTGGGAGTAGCAATAAATCATCTTTTCTCATTCTaGTGTAGGGTGACAGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: AACSSGPPPSSKLGVAINHLFSF*CRVTGQ Trigger: CTGCCCTGTCACCCTACAGCAGAATGAGAAAAGATG...ATTTATTGCTACTCCCAATTTAGAAGAAGGTGGAGGGCCGGAAGAACAAGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR-3UTR TCA 90 bp | AATGAAACAGTCTTTGATGAAACAGACATACCTGGTGTGAAAACAGACTTTGTGAGCGCCTTTACTGGCTaGACCATCTTGCTGGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: NETVFDETDIPGVKTDFVSAFTG*TILLAP Trigger: TGGGGCCAGCAAGATGGTTCAGCCAGTAAAGGCGCT...CACAAAGTCTGTTTTCACACCAGGTATGTCTGTTTCATCAAAGACTGTTTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR-3UTR GCA 90 bp | AAGAGTCCATGGCTCCCGCAGATGTGTGTATATATATTAGTGATTAACAAGGGGACACAGAGCAGGCCATaGACAAACCTGCATGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: KSPWLPQMCVYILVINKGTQSRP*TNLHVL Trigger: AAGCACATGCAGGTTTGTGCATGGCCTGCTCTGTGT...CCCCTTGTTAATCACTAATATATATACACACATCTGCGGGAGCCATGGACTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR CAA 90 bp | CTGACACCTGCAGCTTGTTCTTCCGGCCCTCCACCTTCTTCTAAATaGGGAGTAGCAATAAATTTAAACCCTGGAAATAGGAAATACCTC | + |
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Preference number: 2 (lower is better) Translates to: LTPAACSSGPPPSSK*GVAINLNPGNRKYL Trigger: GAGGTATTTCCTATTTCCAGGGTTTAAATTTATTGCTACTCCCAATTTAGAAGAAGGTGGAGGGCCGGAAGAACAAGCTGCAGGTGTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR-3UTR GCA 90 bp | AATGAAACAGTCTTTGATGAAACAGACATACCTGGTGTGAAAACAGACTTTGTGTGGGGTGCTGACTGGTaGTTTCTAAGCCTCAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: NETVFDETDIPGVKTDFVWGADW*FLSLSL Trigger: GAGGCTGAGGCTTAGAAAGCACCAGTCAGCACCCCA...CACAAAGTCTGTTTTCACACCAGGTATGTCTGTTTCATCAAAGACTGTTTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR-3UTR TCA 90 bp | GCCAGAAACTTGAAGAAACCCATCTCTTCTAAATGTCTCGTAGAAAATTTGTACTGGGTAGGGCTTAAGTaGGGTGATTCTATTGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: ARNLKKPISSKCLVENLYWVGLK*GDSIEG Trigger: ACCCTCAATAGAATCACCTCACTTAAGCCCTACCCA...GTACAAATTTTCTACGAGACATTTAGAAGAGATGGGTTTCTTCAAGTTTCTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR-3UTR GCA 90 bp | CCCTATAATTATGTATTAGAAATAATGATTGCTGGGAACTCTTGTGAGCTGGCTGGCTCCTTCTGCCTTTaGTTTCTCCCTTGCATTCTT | + |
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Preference number: 2 (lower is better) Translates to: PYNYVLEIMIAGNSCELAGSFCL*FLPCIL Trigger: AAGAATGCAAGGGAGAAAGCAAAGGCAGAAGGAGCC...AGCCAGCTCACAAGAGTTCCCAGCAATCATTATTTCTAATACATAATTATAGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR-3UTR TCA 90 bp | AATGAAACAGTCTTTGATGAAACAGACATACCTGGTGTGAAAACAGACTTTGTGAGCATCATGCCCAGCTaGTTCCAGTTTTCTCATGTT | + |
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Preference number: 2 (lower is better) Translates to: NETVFDETDIPGVKTDFVSIMPS*FQFSHV Trigger: AACATGAGAAAACTGGAATCAGCTGGGCATGATGCT...CACAAAGTCTGTTTTCACACCAGGTATGTCTGTTTCATCAAAGACTGTTTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR-3UTR GCA 90 bp | AAGAGTCCATGGCTCCCGCAGATGTGTGTATATATATTAGTGATTAACAAGGGGTCTGATGACCCTCTGTaGATTTCAGTAACACATTTT | + |
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Preference number: 2 (lower is better) Translates to: KSPWLPQMCVYILVINKGSDDPL*ISVTHF Trigger: AAAATGTGTTACTGAAATGCACAGAGGGTCATCAGA...CCCCTTGTTAATCACTAATATATATACACACATCTGCGGGAGCCATGGACTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| 3UTR-3UTR GCA 90 bp | AATGAAACAGTCTTTGATGAAACAGACATACCTGGTGTGAAAACAGACTTTGTGCTTTGCTTTCTCCCTTaGATTCTTCCCTCTGTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: NETVFDETDIPGVKTDFVLCFLP*ILPSVF Trigger: AAAGACAGAGGGAAGAATGCAAGGGAGAAAGCAAAG...CACAAAGTCTGTTTTCACACCAGGTATGTCTGTTTCATCAAAGACTGTTTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR-3UTR CCA 90 bp | GCCAGAAACTTGAAGAAACCCATCTCTTCTAAATGTCTCGTAGAAAATTTGTACCAGTCAGAGACTGTCTaGCTTCTTTACTTCAAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: ARNLKKPISSKCLVENLYQSETV*LLYFKG Trigger: ACCTTTGAAGTAAAGAAGCCAGACAGTCTCTGACTG...GTACAAATTTTCTACGAGACATTTAGAAGAGATGGGTTTCTTCAAGTTTCTGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR-3UTR CCA 90 bp | GCCAGAAACTTGAAGAAACCCATCTCTTCTAAATGTCTCGTAGAAAATTTGTACTTTGGGGTTTCTAATTaGAACCTGCTCTTCAAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: ARNLKKPISSKCLVENLYFGVSN*NLLFKA Trigger: GGCTTTGAAGAGCAGGTTCCAATTAGAAACCCCAAA...GTACAAATTTTCTACGAGACATTTAGAAGAGATGGGTTTCTTCAAGTTTCTGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR-3UTR TCA 90 bp | CCCTATAATTATGTATTAGAAATAATGATTGCTGGGAACTCTTGTGAGCTGGCTCAAAGGTCTTCATTTTaGTGCAAACCCCAAGACTTT | + |
|
Preference number: 2 (lower is better) Translates to: PYNYVLEIMIAGNSCELAQRSSF*CKPQDF Trigger: AAAGTCTTGGGGTTTGCATCAAAATGAAGACCTTTG...AGCCAGCTCACAAGAGTTCCCAGCAATCATTATTTCTAATACATAATTATAGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR CAA 90 bp | TCACAAAAGCTGCCTCTTGTATCAGTAATTAGCTCCTTTATATTGTaGAGTACTATTCTATGGTATAGATATACCACAATTGGTCTCGCC | + |
|
Preference number: 2 (lower is better) Translates to: SQKLPLVSVISSFIL*STILWYRYTTIGLA Trigger: GGCGAGACCAATTGTGGTATATCTATACCATAGAATAGTACTCAACAATATAAAGGAGCTAATTACTGATACAAGAGGCAGCTTTTGTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR GCA 72 bp | CCGTGGTTGCAGCTGGCAGCCAGGAACAGGGTCCCTTaGACTCCTGCCGCAGTTGGGCTGGAATTTACAACA | + |
|
Preference number: 3 (lower is better) Translates to: PWLQLAARNRVP*TPAAVGLEFTT Trigger: TGTTGTAAATTCCAGCCCAACTGCGGCAGGAGTGCAAGGGACCCTGTTCCTGGCTGCCAGCTGCAACCACGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR GCA 72 bp | GCCCATTTATTCTGTGCATGTGTGTGCAGCCGTGGTTaGAGCTGGCAGCCAGGAACAGGGTCCCTTGCACTC | + |
|
Preference number: 3 (lower is better) Translates to: AHLFCACVCSRG*SWQPGTGSLAL Trigger: GAGTGCAAGGGACCCTGTTCCTGGCTGCCAGCTGCAACCACGGCTGCACACACATGCACAGAATAAATGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR CCA 72 bp | GGAGGATTGCCTGAGCCTAGGGTTTCAGGATCAGCCTaGGCACGGCAGCAAGATCAGTCTCAGCAGGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: GGLPEPRVSGSA*ARQQDQSQQGR Trigger: TCTTCCCTGCTGAGACTGATCTTGCTGCCGTGCCCAGGCTGATCCTGAAACCCTAGGCTCAGGCAATCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR CCA 72 bp | CTAAGCCCATTTATTCTGTGCATGTGTGTGCAGCCGTaGTTGCAGCTGGCAGCCAGGAACAGGGTCCCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: LSPFILCMCVQP*LQLAARNRVPC Trigger: GCAAGGGACCCTGTTCCTGGCTGCCAGCTGCAACCACGGCTGCACACACATGCACAGAATAAATGGGCTTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR TCA 72 bp | GTGATTCTATTGAGGGTCTGGCCTGAGGCTAGGCAGTaGGCCGACTCTCAGGCTCCTTCTGCCTTTGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: VILLRVWPEARQ*ADSQAPSAFAF Trigger: GAAAGCAAAGGCAGAAGGAGCCTGAGAGTCGGCTCACTGCCTAGCCTCAGGCCAGACCCTCAATAGAATCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR GCA 72 bp | GCAGCTGGCAGCCAGGAACAGGGTCCCTTGCACTCCTaGCGCAGTTGGGCTGGAATTTACAACAGTATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: AAGSQEQGPLHS*RSWAGIYNSIS Trigger: AGAAATACTGTTGTAAATTCCAGCCCAACTGCGGCAGGAGTGCAAGGGACCCTGTTCCTGGCTGCCAGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR TCA 72 bp | CAGACAGTTGTGAGCTGCCGTGTGGGTTCTGGGAATTaGACCTGGATCCTTTGGAAGAGCAGCCAGTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QTVVSCRVGSGN*TWILWKSSQCS Trigger: AGAGCACTGGCTGCTCTTCCAAAGGATCCAGGTTCAATTCCCAGAACCCACACGGCAGCTCACAACTGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR GCA 72 bp | TTGTGGAAAGTTAGAAAACTTGGCCTTGGCGGTGTGTaGTCTGGTCCAGTCAGGCCCCAGGTACGTACACAG | + |
|
Preference number: 3 (lower is better) Translates to: LWKVRKLGLGGV*SGPVRPQVRTQ Trigger: CTGTGTACGTACCTGGGGCCTGACTGGACCAGAGCACACACCGCCAAGGCCAAGTTTTCTAACTTTCCACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR-3UTR CAA 90 bp | GGTTGCACCCCTGCTTCATGCTCAGCAAAGGCTCTGCTGAAAGGTACCCCAGCCATGTGCTTACTCTATTaGCTATGCCACAGTGGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: GCTPASCSAKALLKGTPAMCLLY*LCHSGR Trigger: TCTCCCACTGTGGCATAGCAAATAGAGTAAGCACAT...GGCTGGGGTACCTTTCAGCAGAGCCTTTGCTGAGCATGAAGCAGGGGTGCAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTCAGCAAAGGCTCTGCTGAAAGGTACCCCAGCCCCTGCCAGGTGCTTAGTTCTGATTCAAGCCCATaGTTCTTGGTGTCCAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: MLSKGSAERYPSPCQVLSSDSSP*FLVSRP Trigger: TGGTCTGGACACCAAGAACAATGGGCTTGAATCAGA...ACTAAGCACCTGGCAGGGGCTGGGGTACCTTTCAGCAGAGCCTTTGCTGAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR TCA 72 bp | CCCATAACTCAGAGCCTCATAAAGTCACAGCAGCCATaGTCGATGGCAAAGCACGTGAGTCCCAGCAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: PITQSLIKSQQP*SMAKHVSPSSS Trigger: AGAGCTGCTGGGACTCACGTGCTTTGCCATCGATCATGGCTGCTGTGACTTTATGAGGCTCTGAGTTATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR TCA 72 bp | TATGTACTAAGGGCAGCAGAAGCAGCAGCGTCTCACTaGCGTGCTAGCTTTGTGTTTGTGGCAAGCCATGAC | + |
|
Preference number: 3 (lower is better) Translates to: YVLRAAEAAASH*RASFVFVASHD Trigger: GTCATGGCTTGCCACAAACACAAAGCTAGCACGTCAGTGAGACGCTGCTGCTTCTGCTGCCCTTAGTACATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR GCA 72 bp | GTAGTCTGCTCACACAGAGCAGGCCATGCACAAACCTaGATGTGCTTACTCTATTTGCTATGCCACAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: VVCSHRAGHAQT*MCLLYLLCHSG Trigger: CCCACTGTGGCATAGCAAATAGAGTAAGCACATGCAGGTTTGTGCATGGCCTGCTCTGTGTGAGCAGACTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR CCA 72 bp | CCCTTGCATTCTTCCCTCTGTCTTTGCTACACCGTGTaGAAGGAGGCGCTTCTTACCTTGAACACCACACTT | + |
|
Preference number: 3 (lower is better) Translates to: PLHSSLCLCYTV*KEALLTLNTTL Trigger: AAGTGTGGTGTTCAAGGTAAGAAGCGCCTCCTTCCACACGGTGTAGCAAAGACAGAGGGAAGAATGCAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR CCA 72 bp | AGCCAGGAACAGGGTCCCTTGCACTCCTGCCGCAGTTaGGCTGGAATTTACAACAGTATTTCTAGGTCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: SQEQGPLHSCRS*AGIYNSISRSV Trigger: TACTGACCTAGAAATACTGTTGTAAATTCCAGCCCAACTGCGGCAGGAGTGCAAGGGACCCTGTTCCTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR TCA 72 bp | TCTCTCTTCCCACCATTATTGGTGGGTTTCAGGAATTaGACTCAGGTCATCAGAGCTGCTTGGTTAGCGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SLFPPLLVGFRN*TQVIRAAWLAP Trigger: AGGCGCTAACCAAGCAGCTCTGATGACCTGAGTTCAATTCCTGAAACCCACCAATAATGGTGGGAAGAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR GCA 72 bp | CTCAATGGCAAAGCTACTTCATTCTCGTTAATGTTCTaGTGTAGTCTGCTCACACAGAGCAGGCCATGCACA | + |
|
Preference number: 3 (lower is better) Translates to: LNGKATSFSLMF*CSLLTQSRPCT Trigger: TGTGCATGGCCTGCTCTGTGTGAGCAGACTACAGCAGAACATTAACGAGAATGAAGTAGCTTTGCCATTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR TCA 72 bp | GACCTGTACATTCTAGAAAACACATCTGCAACTCAGTaGCCTAGTGAACAACCTTCAGACAAAGAGCCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: DLYILENTSATQ*PSEQPSDKEPP Trigger: GGGAGGCTCTTTGTCTGAAGGTTGTTCACTAGGTCACTGAGTTGCAGATGTGTTTTCTAGAATGTACAGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR TCA 72 bp | ATTTGCTATGCCACAGTGGGAGAAAGGCTCCCCAAGTaGCCTGTACATTCTAGAAAACACATCTGCAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: ICYATVGERLPK*PVHSRKHICNS Trigger: TGAGTTGCAGATGTGTTTTCTAGAATGTACAGGTCACTTGGGGAGCCTTTCTCCCACTGTGGCATAGCAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR TCA 72 bp | GTACCCGGGACAGACAAACCGCAATTAAGTTTCCCATaGGTGTCTTGCTACCACAATCGGATGAACATCAAT | + |
|
Preference number: 3 (lower is better) Translates to: VPGTDKPQLSFP*VSCYHNRMNIN Trigger: ATTGATGTTCATCCGATTGTGGTAGCAAGACACTCATGGGAAACTTAATTGCGGTTTGTCTGTCCCGGGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR CCA 72 bp | GGGAAGAGGTACAAACGCTCATTCTTTTCTTTCCGTTaGATGGGTTCTCAGCAGATGTACTGTATAGTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: GKRYKRSFFSFR*MGSQQMYCIVA Trigger: GGCTACTATACAGTACATCTGCTGAGAACCCATCCAACGGAAAGAAAAGAATGAGCGTTTGTACCTCTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR CCA 72 bp | TTTGTGAAGTCATGTCTCTCTTCCCACCATTATTGGTaGGTTTCAGGAATTGAACTCAGGTCATCAGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: FVKSCLSSHHYW*VSGIELRSSEL Trigger: CAGCTCTGATGACCTGAGTTCAATTCCTGAAACCCACCAATAATGGTGGGAAGAGAGACATGACTTCACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR-3UTR CAA 90 bp | AAGCACGGAAGTTGTACTAGGAATGAAACAGTCTTTGATGAAACAGACATACCTTTCTTCCCTCTGTCTTaGCTACACCGTGTGGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: KHGSCTRNETVFDETDIPFFPLS*LHRVEG Trigger: TCCTTCCACACGGTGTAGCAAAGACAGAGGGAAGAA...AGGTATGTCTGTTTCATCAAAGACTGTTTCATTCCTAGTACAACTTCCGTGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR-3UTR CAA 90 bp | AAGCACGGAAGTTGTACTAGGAATGAAACAGTCTTTGATGAAACAGACATACCTACTGACGTGCTAGCTTaGTGTTTGTGGCAAGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: KHGSCTRNETVFDETDIPTDVLA*CLWQAM Trigger: CATGGCTTGCCACAAACACAAAGCTAGCACGTCAGT...AGGTATGTCTGTTTCATCAAAGACTGTTTCATTCCTAGTACAACTTCCGTGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR TCA 72 bp | GTTAGGTTCTCCTGTCTCACTCTACAGCCCCCTTTCTaGAAGGTCTTCATTCTTAAAGGTCACATTCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: VRFSCLTLQPPF*KVFILKGHIQN Trigger: ATTCTGAATGTGACCTTTAAGAATGAAGACCTTTCAGAAAGGGGGCTGTAGAGTGAGACAGGAGAACCTAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR CCA 72 bp | ACCCTTCAAACAAAGAGACGGCAGTCAGAGACTGTCTaGCTTCTTTACTTCAAAGGTCTTCATTTTGATGCA | + |
|
Preference number: 3 (lower is better) Translates to: TLQTKRRQSETV*LLYFKGLHFDA Trigger: TGCATCAAAATGAAGACCTTTGAAGTAAAGAAGCCAGACAGTCTCTGACTGCCGTCTCTTTGTTTGAAGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR CCA 72 bp | CCGGAAATATTAACAGTGGGAATCCTGGAAGCTCAATaGCAAAGCTACTTCATTCTCGTTAATGTTCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PEILTVGILEAQ*QSYFILVNVLL Trigger: CAGCAGAACATTAACGAGAATGAAGTAGCTTTGCCATTGAGCTTCCAGGATTCCCACTGTTAATATTTCCGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR CCA 72 bp | AACTTTGTGAAGTCATGTCTCTCTTCCCACCATTATTaGTGGGTTTCAGGAATTGAACTCAGGTCATCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: NFVKSCLSSHHY*WVSGIELRSSE Trigger: CTCTGATGACCTGAGTTCAATTCCTGAAACCCACCAATAATGGTGGGAAGAGAGACATGACTTCACAAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR-3UTR CAA 90 bp | TTTTATGCAACGAGCTTCCATCCAAAGCACGACTTGTGGATGGTAAGCAACACGACTACCACTTCCATTTaGACAACCAAGATTTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: FYATSFHPKHDLWMVSNTTTTSI*TTKISK Trigger: TTTGGAAATCTTGGTTGTCAAAATGGAAGTGGTAGT...CGTGTTGCTTACCATCCACAAGTCGTGCTTTGGATGGAAGCTCGTTGCATAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR CCA 72 bp | ATGAGTGTCTTGCTACCACAATCGGATGAACATCAATaGGTGATCCTAGAGAAGTCTGCCATCAATAAATAC | + |
|
Preference number: 3 (lower is better) Translates to: MSVLLPQSDEHQ*VILEKSAINKY Trigger: GTATTTATTGATGGCAGACTTCTCTAGGATCACCCATTGATGTTCATCCGATTGTGGTAGCAAGACACTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR-3UTR CAA 90 bp | AATGAAACAGTCTTTGATGAAACAGACATACCTGGTGTGAAAACAGACTTTGTGCCTTTGCTTTCTCCCTaGCATTCTTCCCTCTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: NETVFDETDIPGVKTDFVPLLSP*HSSLCL Trigger: AAGACAGAGGGAAGAATGCAAGGGAGAAAGCAAAGG...CACAAAGTCTGTTTTCACACCAGGTATGTCTGTTTCATCAAAGACTGTTTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR-3UTR CAA 90 bp | AATGAAACAGTCTTTGATGAAACAGACATACCTGGTGTGAAAACAGACTTTGTGTCAAAGGTCTTCATTTaGATGCAAACCCCAAGACTT | + |
|
Preference number: 3 (lower is better) Translates to: NETVFDETDIPGVKTDFVSKVFI*MQTPRL Trigger: AAGTCTTGGGGTTTGCATCAAAATGAAGACCTTTGA...CACAAAGTCTGTTTTCACACCAGGTATGTCTGTTTCATCAAAGACTGTTTCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR-3UTR CAA 90 bp | CCCTATAATTATGTATTAGAAATAATGATTGCTGGGAACTCTTGTGAGCTGGCTGCTCTTGTAAATGGTTaGTTGAACAAGTTCAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: PYNYVLEIMIAGNSCELAALVNG*LNKFRA Trigger: TGCTCTGAACTTGTTCAACAAACCATTTACAAGAGC...AGCCAGCTCACAAGAGTTCCCAGCAATCATTATTTCTAATACATAATTATAGGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR TCA 72 bp | GGGAACAGTTCATCTTGTGTCATCTCTGCTATATTTTaGTATATGACAGTTCATTTCCTTAGGGACTTACAA | + |
|
Preference number: 3 (lower is better) Translates to: GNSSSCVISAIF*YMTVHFLRDLQ Trigger: TTGTAAGTCCCTAAGGAAATGAACTGTCATATATCAAAATATAGCAGAGATGACACAAGATGAACTGTTCCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR CCA 72 bp | GTAATTAGCTCCTTTATATTGTTGAGTACTATTCTATaGTATAGATATACCACAATTGGTCTCGCCAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: VISSFILLSTIL*YRYTTIGLARH Trigger: GTGTCTGGCGAGACCAATTGTGGTATATCTATACCATAGAATAGTACTCAACAATATAAAGGAGCTAATTAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR CCA 72 bp | TATTCATCTTACCCAGTTTCCAATTTAATAATGATTTaGTTCAAGGTAGGGGGCTTCCATCACTGTAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: YSSYPVSNLIMI*FKVGGFHHCKN Trigger: ATTCTTACAGTGATGGAAGCCCCCTACCTTGAACCAAATCATTATTAAATTGGAAACTGGGTAAGATGAATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR CCA 72 bp | GTAGTAGTTCATCTTGTCTCCTCTCTTGATATATTTTaGGAACAGTTCATCTTGTGTCATCTCTGCTATATT | + |
|
Preference number: 3 (lower is better) Translates to: VVVHLVSSLDIF*EQFILCHLCYI Trigger: AATATAGCAGAGATGACACAAGATGAACTGTTCCCAAAATATATCAAGAGAGGAGACAAGATGAACTACTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS-3UTR CCA 90 bp | CATGTGTGTGCAGCCGTGGTTGCAGCTGGCAGCCAGGAACAGGGTCCCTTGCACTGCCGGCATGCACCCTaGGGCCAGGGGATGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HVCAAVVAAGSQEQGPLHCRHAP*GQGMPQ Trigger: CTGAGGCATCCCCTGGCCCCAGGGTGCATGCCGGCA...GTGCAAGGGACCCTGTTCCTGGCTGCCAGCTGCAACCACGGCTGCACACACATG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS-3UTR CCA 90 bp | CATGTGTGTGCAGCCGTGGTTGCAGCTGGCAGCCAGGAACAGGGTCCCTTGCACCTCCACCTCCCCTGGTaGCACCGTGACCATCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HVCAAVVAAGSQEQGPLHLHLPW*HRDHPA Trigger: GGCCGGATGGTCACGGTGCCACCAGGGGAGGTGGAG...GTGCAAGGGACCCTGTTCCTGGCTGCCAGCTGCAACCACGGCTGCACACACATG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS-3UTR TCA 90 bp | GGTTGCACCCCTGCTTCATGCTCAGCAAAGGCTCTGCTGAAAGGTACCCCAGCCCATCCCTGGGTGCCTTaGAAACATGGCTTGCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GCTPASCSAKALLKGTPAHPWVP*KHGLLG Trigger: GCCAAGCAAGCCATGTTTTCAAGGCACCCAGGGATG...GGCTGGGGTACCTTTCAGCAGAGCCTTTGCTGAGCATGAAGCAGGGGTGCAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS-3UTR TCA 90 bp | GGTTGCACCCCTGCTTCATGCTCAGCAAAGGCTCTGCTGAAAGGTACCCCAGCCTCCTTGGAGCTGCCTTaGAGTATTCCTCCCTCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GCTPASCSAKALLKGTPASLELP*SIPPSG Trigger: TCCCGAGGGAGGAATACTTCAAGGCAGCTCCAAGGA...GGCTGGGGTACCTTTCAGCAGAGCCTTTGCTGAGCATGAAGCAGGGGTGCAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS-3UTR GCA 90 bp | ACGCCCAGCTCTTTTTATGCAACGAGCTTCCATCCAAAGCACGACTTGTGGATGCCCCGAGGTCGCAGGTaGGTGTCCTCCTTGTGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TPSSFYATSFHPKHDLWMPRGRR*VSSLCA Trigger: GGCGCACAAGGAGGACACGCACCTGCGACCTCGGGG...CATCCACAAGTCGTGCTTTGGATGGAAGCTCGTTGCATAAAAAGAGCTGGGCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS-3UTR GCA 90 bp | GCAGCTTGTTCTTCCGGCCCTCCACCTTCTTCTAAATTGGGAGTAGCAATAAATCTAGGGAGCGGGCGGTaGCGGCATGCACCCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AACSSGPPPSSKLGVAINLGSGR*RHAPWG Trigger: GCCCCAGGGTGCATGCCGGCACCGCCCGCTCCCTAG...ATTTATTGCTACTCCCAATTTAGAAGAAGGTGGAGGGCCGGAAGAACAAGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS-3UTR CCA 90 bp | ACGCCCAGCTCTTTTTATGCAACGAGCTTCCATCCAAAGCACGACTTGTGGATGCACGTAGCCGGCGGCTaGGGACAACAGGGCGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TPSSFYATSFHPKHDLWMHVAGG*GQQGAA Trigger: TGCAGCGCCCTGTTGTCCCCAGCCGCCGGCTACGTG...CATCCACAAGTCGTGCTTTGGATGGAAGCTCGTTGCATAAAAAGAGCTGGGCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR CAA 72 bp | ATGGCAAAGCACGTGAGTCCCAGCAGCTCTGGAGGATaGCCTGAGCCTAGGGTTTCAGGATCAGCCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: MAKHVSPSSSGG*PEPRVSGSAWA Trigger: TGCCCAGGCTGATCCTGAAACCCTAGGCTCAGGCAATCCTCCAGAGCTGCTGGGACTCACGTGCTTTGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR CAA 72 bp | CCGACTCTCAGGCTCCTTCTGCCTTTGCTTTCTCCCTaGCATTCTTCCCTCTGTCTTTGCTACACCGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PTLRLLLPLLSP*HSSLCLCYTVW Trigger: CCACACGGTGTAGCAAAGACAGAGGGAAGAATGCAAGGGAGAAAGCAAAGGCAGAAGGAGCCTGAGAGTCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS-3UTR GCA 90 bp | ACGCCCAGCTCTTTTTATGCAACGAGCTTCCATCCAAAGCACGACTTGTGGATGCGCCTCCTCAGTGGATaGACTGTCCAGCTCCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TPSSFYATSFHPKHDLWMRLLSG*TVQLLI Trigger: GATGAGGAGCTGGACAGTGCATCCACTGAGGAGGCG...CATCCACAAGTCGTGCTTTGGATGGAAGCTCGTTGCATAAAAAGAGCTGGGCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS-3UTR GCA 90 bp | AAGCACGGAAGTTGTACTAGGAATGAAACAGTCTTTGATGAAACAGACATACCTCGGGCGGTGCCGGCATaGACCCTGGGGCCAGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KHGSCTRNETVFDETDIPRAVPA*TLGPGD Trigger: ATCCCCTGGCCCCAGGGTGCATGCCGGCACCGCCCG...AGGTATGTCTGTTTCATCAAAGACTGTTTCATTCCTAGTACAACTTCCGTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR CAA 72 bp | ATGTCTTGTCATTGTGGAAAGTTAGAAAACTTGGCCTaGGCGGTGTGTGCTCTGGTCCAGTCAGGCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MSCHCGKLENLA*AVCALVQSGPR Trigger: CCTGGGGCCTGACTGGACCAGAGCACACACCGCCAAGGCCAAGTTTTCTAACTTTCCACAATGACAAGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS-3UTR GCA 90 bp | AACAAAGAGACGGCAGTCAGAGACTGTCTGGCTTCTTTACTTCAAAGGTCTTCATGCGTGTCCTCCTTGTaGGCCGAGGCCGGAAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NKETAVRDCLASLLQRSSCVSSL*AEAGKL Trigger: GAGCTTTCCGGCCTCGGCGCACAAGGAGGACACGCA...TGAAGACCTTTGAAGTAAAGAAGCCAGACAGTCTCTGACTGCCGTCTCTTTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS-3UTR CCA 90 bp | ACGCCCAGCTCTTTTTATGCAACGAGCTTCCATCCAAAGCACGACTTGTGGATGATCCCTGTGCTGTTGTaGACGGGGCCATCACTGATG | + |
|
Preference number: 4 (lower is better) Translates to: TPSSFYATSFHPKHDLWMIPVLL*TGPSLM Trigger: CATCAGTGATGGCCCCGTCCACAACAGCACAGGGAT...CATCCACAAGTCGTGCTTTGGATGGAAGCTCGTTGCATAAAAAGAGCTGGGCGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS-3UTR GCA 90 bp | GCAGCTTGTTCTTCCGGCCCTCCACCTTCTTCTAAATTGGGAGTAGCAATAAATGCCGGAAAGCTCTGCTaGCAGATGCTACTCGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AACSSGPPPSSKLGVAINAGKLC*QMLLES Trigger: GGACTCGAGTAGCATCTGGCAGCAGAGCTTTCCGGC...ATTTATTGCTACTCCCAATTTAGAAGAAGGTGGAGGGCCGGAAGAACAAGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS-3UTR GCA 90 bp | ACGCCCAGCTCTTTTTATGCAACGAGCTTCCATCCAAAGCACGACTTGTGGATGGGCCTTCCTTGGAGCTaGCTTGAAGTATTCCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TPSSFYATSFHPKHDLWMGLPWS*LEVFLP Trigger: AGGGAGGAATACTTCAAGGCAGCTCCAAGGAAGGCC...CATCCACAAGTCGTGCTTTGGATGGAAGCTCGTTGCATAAAAAGAGCTGGGCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS-3UTR TCA 90 bp | AAGAGTCCATGGCTCCCGCAGATGTGTGTATATATATTAGTGATTAACAAGGGGCATCTACCTCGTTGGTaGCAGCCCAGGACACGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSPWLPQMCVYILVINKGHLPRW*QPRTRS Trigger: GCTCCGTGTCCTGGGCTGTCACCAACGAGGTAGATG...CCCCTTGTTAATCACTAATATATATACACACATCTGCGGGAGCCATGGACTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR CAA 72 bp | CTCCTCCGAATGCCAGGAGCTCTTGTAAATGGTTTGTaGAACAAGTTCAGAGCATGCTACCTACCCCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLRMPGALVNGL*NKFRACYLPLH Trigger: GTGCAGGGGTAGGTAGCATGCTCTGAACTTGTTCAACAAACCATTTACAAGAGCTCCTGGCATTCGGAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR CAA 72 bp | GTCTCTCTTCCCACCATTATTGGTGGGTTTCAGGAATaGAACTCAGGTCATCAGAGCTGCTTGGTTAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSLPTIIGGFQE*NSGHQSCLVSA Trigger: GGCGCTAACCAAGCAGCTCTGATGACCTGAGTTCAATTCCTGAAACCCACCAATAATGGTGGGAAGAGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS-3UTR TCA 90 bp | CCCTATAATTATGTATTAGAAATAATGATTGCTGGGAACTCTTGTGAGCTGGCTGGACGGGGCCATCACTaGTGGCCAGGCAGCTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PYNYVLEIMIAGNSCELAGRGHH*WPGSSQ Trigger: TTGGGAGCTGCCTGGCCATCAGTGATGGCCCCGTCC...AGCCAGCTCACAAGAGTTCCCAGCAATCATTATTTCTAATACATAATTATAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS-3UTR TCA 90 bp | ACGCCCAGCTCTTTTTATGCAACGAGCTTCCATCCAAAGCACGACTTGTGGATGCCTCCATACCATTTCTaGAGCCAGATGTGTTCTACC | + |
|
Preference number: 4 (lower is better) Translates to: TPSSFYATSFHPKHDLWMPPYHF*SQMCST Trigger: GGTAGAACACATCTGGCTTCAGAAATGGTATGGAGG...CATCCACAAGTCGTGCTTTGGATGGAAGCTCGTTGCATAAAAAGAGCTGGGCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS-3UTR GCA 90 bp | AAGAGTCCATGGCTCCCGCAGATGTGTGTATATATATTAGTGATTAACAAGGGGAGCTCTGCTGCCAGATaGTACTCGAGTCCTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KSPWLPQMCVYILVINKGSSAAR*YSSPPA Trigger: TGCTGGAGGACTCGAGTAGCATCTGGCAGCAGAGCT...CCCCTTGTTAATCACTAATATATATACACACATCTGCGGGAGCCATGGACTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS-3UTR CCA 90 bp | CCCTATAATTATGTATTAGAAATAATGATTGCTGGGAACTCTTGTGAGCTGGCTGAACTCCACCTCCCCTaGTGGCACCGTGACCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: PYNYVLEIMIAGNSCELAELHLP*WHRDHP Trigger: CGGATGGTCACGGTGCCACCAGGGGAGGTGGAGTTC...AGCCAGCTCACAAGAGTTCCCAGCAATCATTATTTCTAATACATAATTATAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS-3UTR CCA 90 bp | AATGAAACAGTCTTTGATGAAACAGACATACCTGGTGTGAAAACAGACTTTGTGGCAGCGCCTCCTCAGTaGATGCACTGTCCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NETVFDETDIPGVKTDFVAAPPQ*MHCPAP Trigger: AGGAGCTGGACAGTGCATCCACTGAGGAGGCGCTGC...CACAAAGTCTGTTTTCACACCAGGTATGTCTGTTTCATCAAAGACTGTTTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR CAA 72 bp | GCAGCTTGTTCTTCCGGCCCTCCACCTTCTTCTAAATaGGGAGTAGCAATAAATTTAAACCCTGGAAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: AACSSGPPPSSK*GVAINLNPGNR Trigger: CCTATTTCCAGGGTTTAAATTTATTGCTACTCCCAATTTAGAAGAAGGTGGAGGGCCGGAAGAACAAGCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS-3UTR GCA 90 bp | AAGCACGGAAGTTGTACTAGGAATGAAACAGTCTTTGATGAAACAGACATACCTCTTGAAAACATGGCTTaGTTGGCGAACTCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KHGSCTRNETVFDETDIPLENMA*LANSTS Trigger: GGAGGTGGAGTTCGCCAAGCAAGCCATGTTTTCAAG...AGGTATGTCTGTTTCATCAAAGACTGTTTCATTCCTAGTACAACTTCCGTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS-3UTR CCA 90 bp | CCCTATAATTATGTATTAGAAATAATGATTGCTGGGAACTCTTGTGAGCTGGCTCCACCGCAGGGTCCTTaGCTGTCATGTAGAAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PYNYVLEIMIAGNSCELAPPQGP*LSCRRK Trigger: CTTTCTTCTACATGACAGCCAAGGACCCTGCGGTGG...AGCCAGCTCACAAGAGTTCCCAGCAATCATTATTTCTAATACATAATTATAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| 3UTR CAA 72 bp | AAATTGCCTGAAGAGGGACCATCTGATTCAAGCCCATaGTTCTTGGTGTCCAGACCATTCAGATTTCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: KLPEEGPSDSSP*FLVSRPFRFHF Trigger: GAAATGAAATCTGAATGGTCTGGACACCAAGAACAATGGGCTTGAATCAGATGGTCCCTCTTCAGGCAATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS-3UTR TCA 90 bp | AAGAGTCCATGGCTCCCGCAGATGTGTGTATATATATTAGTGATTAACAAGGGGCTACCCACATCTTCATaGAGAACCATTCATACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KSPWLPQMCVYILVINKGLPTSS*RTIHTV Trigger: GACAGTATGAATGGTTCTTCATGAAGATGTGGGTAG...CCCCTTGTTAATCACTAATATATATACACACATCTGCGGGAGCCATGGACTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS-3UTR GCA 90 bp | GCCAGAAACTTGAAGAAACCCATCTCTTCTAAATGTCTCGTAGAAAATTTGTACTTCCTCATCCCTGGGTaGCTTGAAAACATGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ARNLKKPISSKCLVENLYFLIPG*LENMAC Trigger: GCAAGCCATGTTTTCAAGGCACCCAGGGATGAGGAA...GTACAAATTTTCTACGAGACATTTAGAAGAGATGGGTTTCTTCAAGTTTCTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS-3UTR CCA 90 bp | GCCAGAAACTTGAAGAAACCCATCTCTTCTAAATGTCTCGTAGAAAATTTGTACGGTGCCTTGAAAACATaGCTTGCTTGGCGAACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ARNLKKPISSKCLVENLYGALKT*LAWRTP Trigger: TGGAGTTCGCCAAGCAAGCCATGTTTTCAAGGCACC...GTACAAATTTTCTACGAGACATTTAGAAGAGATGGGTTTCTTCAAGTTTCTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS GCA 90 bp | GCGGCCGGTGCGGGCCTGGCGCGGGCGGAGCCCCGAGGTCGCAGGTaGGTGTCCTCCTTGTGCGCCGAGGCCGGAAAGCTCTGCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AAGAGLARAEPRGRR*VSSLCAEAGKLCCQ Trigger: CTGGCAGCAGAGCTTTCCGGCCTCGGCGCACAAGGAGGACACGCACCTGCGACCTCGGGGCTCCGCCCGCGCCAGGCCCGCACCGGCCGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS GCA 90 bp | CAGGGGATGCCTCAGATGAGCCGCTCTCCCGCCGGTAGGAGAACATaGCACGCGCGGCCGGTGCGGGCCTGGCGCGGGCGGAGCCCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: QGMPQMSRSPAGRRT*HARPVRAWRGRSPE Trigger: CTCGGGGCTCCGCCCGCGCCAGGCCCGCACCGGCCGCGCGTGGCATGTTCTCCTACCGGCGGGAGAGCGGCTCATCTGAGGCATCCCCTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS CCA 90 bp | TCTCCCGCCGGTAGGAGAACATGCCACGCGCGGCCGGTGCGGGCCTaGCGCGGGCGGAGCCCCGAGGTCGCAGGTGCGTGTCCTCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SPAGRRTCHARPVRA*RGRSPEVAGACPPC Trigger: ACAAGGAGGACACGCACCTGCGACCTCGGGGCTCCGCCCGCGCCAGGCCCGCACCGGCCGCGCGTGGCATGTTCTCCTACCGGCGGGAGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS GCA 90 bp | CTGGCGCGGGCGGAGCCCCGAGGTCGCAGGTGCGTGTCCTCCTTGTaGGCCGAGGCCGGAAAGCTCTGCTGCCAGATGCTACTCGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LARAEPRGRRCVSSL*AEAGKLCCQMLLES Trigger: GGACTCGAGTAGCATCTGGCAGCAGAGCTTTCCGGCCTCGGCGCACAAGGAGGACACGCACCTGCGACCTCGGGGCTCCGCCCGCGCCAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS GCA 90 bp | CGCAGGTGCGTGTCCTCCTTGTGCGCCGAGGCCGGAAAGCTCTGCTaGCAGATGCTACTCGAGTCCTCCAGCAGCGCGGGCAGCGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RRCVSSLCAEAGKLC*QMLLESSSSAGSAS Trigger: GGAGGCGCTGCCCGCGCTGCTGGAGGACTCGAGTAGCATCTGGCAGCAGAGCTTTCCGGCCTCGGCGCACAAGGAGGACACGCACCTGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS GCA 90 bp | GGTCGCAGGTGCGTGTCCTCCTTGTGCGCCGAGGCCGGAAAGCTCTaGTGCCAGATGCTACTCGAGTCCTCCAGCAGCGCGGGCAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GRRCVSSLCAEAGKL*CQMLLESSSSAGSA Trigger: GGCGCTGCCCGCGCTGCTGGAGGACTCGAGTAGCATCTGGCAGCAGAGCTTTCCGGCCTCGGCGCACAAGGAGGACACGCACCTGCGACC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS GCA 90 bp | GCGTGTCCTCCTTGTGCGCCGAGGCCGGAAAGCTCTGCTGCCAGATaGTACTCGAGTCCTCCAGCAGCGCGGGCAGCGCCTCCTCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ACPPCAPRPESSAAR*YSSPPAARAAPPQW Trigger: CCACTGAGGAGGCGCTGCCCGCGCTGCTGGAGGACTCGAGTAGCATCTGGCAGCAGAGCTTTCCGGCCTCGGCGCACAAGGAGGACACGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS GCA 90 bp | CGGAGCTCACGATCACGTAGCCGGCGGCTGGGGACAACAGGGCGCTaGAGCATAGCAACCAGGACAGGCGACTCCCTGGCCAAGCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RSSRSRSRRLGTTGR*SIATRTGDSLAKQD Trigger: GTCCTGCTTGGCCAGGGAGTCGCCTGTCCTGGTTGCTATGCTGCAGCGCCCTGTTGTCCCCAGCCGCCGGCTACGTGATCGTGAGCTCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS GCA 90 bp | GCTACTCGAGTCCTCCAGCAGCGCGGGCAGCGCCTCCTCAGTGGATaGACTGTCCAGCTCCTCATCTACCTCGTTGGTGACAGCCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ATRVLQQRGQRLLSG*TVQLLIYLVGDSPG Trigger: TCCTGGGCTGTCACCAACGAGGTAGATGAGGAGCTGGACAGTGCATCCACTGAGGAGGCGCTGCCCGCGCTGCTGGAGGACTCGAGTAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS CCA 90 bp | CTGATGGCCAGGCAGCTCCCAAAGGGCAGTCCTTGGATCTTTTCGTaGGTGGACACAGTGGCCAGACAGCCCCAGGAGCTAGCGTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LMARQLPKGSPWIFS*VDTVARQPQELAWA Trigger: AGCCCACGCTAGCTCCTGGGGCTGTCTGGCCACTGTGTCCACCCACGAAAAGATCCAAGGACTGCCCTTTGGGAGCTGCCTGGCCATCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS CCA 90 bp | TTCTGCAAAACTCCCCCTCAGACTCCGGCAGCACCAGCGAGGCTGTaGGATTCTTCACCAGGTCAGCCACCGCAGGGTCCTTGGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FCKTPPQTPAAPARL*DSSPGQPPQGPWLS Trigger: TGACAGCCAAGGACCCTGCGGTGGCTGACCTGGTGAAGAATCCCACAGCCTCGCTGGTGCTGCCGGAGTCTGAGGGGGAGTTTTGCAGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS TCA 90 bp | TGTAGAAGAAAGGGATCCCTGTGCTGTTGTGGACGGGGCCATCACTaGTGGCCAGGCAGCTCCCAAAGGGCAGTCCTTGGATCTTTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: CRRKGSLCCCGRGHH*WPGSSQRAVLGSFR Trigger: ACGAAAAGATCCAAGGACTGCCCTTTGGGAGCTGCCTGGCCATCAGTGATGGCCCCGTCCACAACAGCACAGGGATCCCTTTCTTCTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS-3UTR CAA 90 bp | ACGCCCAGCTCTTTTTATGCAACGAGCTTCCATCCAAAGCACGACTTGTGGATGGGGATCCCTGTGCTGTaGTGGACGGGGCCATCACTG | + |
|
Preference number: 5 (lower is better) Translates to: TPSSFYATSFHPKHDLWMGIPVL*WTGPSL Trigger: CAGTGATGGCCCCGTCCACAACAGCACAGGGATCCC...CATCCACAAGTCGTGCTTTGGATGGAAGCTCGTTGCATAAAAAGAGCTGGGCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS TCA 90 bp | CTCCATACCATTTCTGAAGCCAGATGTGTTCTACCCACATCTTCATaGAGAACCATTCATACTGTCGGGGCCACTTCCTCATCCCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LHTISEARCVLPTSS*RTIHTVGATSSSLG Trigger: ACCCAGGGATGAGGAAGTGGCCCCGACAGTATGAATGGTTCTTCATGAAGATGTGGGTAGAACACATCTGGCTTCAGAAATGGTATGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS TCA 90 bp | AAGTATTCCTCCCTCGGGATGTCAGATACACCTCCATACCATTTCTaGAGCCAGATGTGTTCTACCCACATCTTCATGAAGAACCATTCA | + |
|
Preference number: 5 (lower is better) Translates to: KYSSLGMSDTPPYHF*SQMCSTHIFMKNHS Trigger: TGAATGGTTCTTCATGAAGATGTGGGTAGAACACATCTGGCTTCAGAAATGGTATGGAGGTGTATCTGACATCCCGAGGGAGGAATACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS-3UTR CAA 90 bp | AATGAAACAGTCTTTGATGAAACAGACATACCTGGTGTGAAAACAGACTTTGTGGAAAACATGGCTTGCTaGGCGAACTCCACCTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: NETVFDETDIPGVKTDFVENMAC*ANSTSP Trigger: AGGGGAGGTGGAGTTCGCCAAGCAAGCCATGTTTTC...CACAAAGTCTGTTTTCACACCAGGTATGTCTGTTTCATCAAAGACTGTTTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS-3UTR CAA 90 bp | CCCTATAATTATGTATTAGAAATAATGATTGCTGGGAACTCTTGTGAGCTGGCTTCATCCCTGGGTGCCTaGAAAACATGGCTTGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PYNYVLEIMIAGNSCELASSLGA*KTWLAW Trigger: CCAAGCAAGCCATGTTTTCAAGGCACCCAGGGATGA...AGCCAGCTCACAAGAGTTCCCAGCAATCATTATTTCTAATACATAATTATAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS GCA 72 bp | CTCCCGCCGGTAGGAGAACATGCCACGCGCGGCCGGTaGGGGCCTGGCGCGGGCGGAGCCCCGAGGTCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LPPVGEHATRGR*GPGAGGAPRSQ Trigger: CTGCGACCTCGGGGCTCCGCCCGCGCCAGGCCCGCACCGGCCGCGCGTGGCATGTTCTCCTACCGGCGGGAG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS GCA 72 bp | GCGGGCCTGGCGCGGGCGGAGCCCCGAGGTCGCAGGTaGGTGTCCTCCTTGTGCGCCGAGGCCGGAAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: AGLARAEPRGRR*VSSLCAEAGKL Trigger: GAGCTTTCCGGCCTCGGCGCACAAGGAGGACACGCACCTGCGACCTCGGGGCTCCGCCCGCGCCAGGCCCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS GCA 72 bp | CCTCAGATGAGCCGCTCTCCCGCCGGTAGGAGAACATaGCACGCGCGGCCGGTGCGGGCCTGGCGCGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PQMSRSPAGRRT*HARPVRAWRGR Trigger: CCGCCCGCGCCAGGCCCGCACCGGCCGCGCGTGGCATGTTCTCCTACCGGCGGGAGAGCGGCTCATCTGAGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS CCA 72 bp | GGTAGGAGAACATGCCACGCGCGGCCGGTGCGGGCCTaGCGCGGGCGGAGCCCCGAGGTCGCAGGTGCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: GRRTCHARPVRA*RGRSPEVAGAC Trigger: ACACGCACCTGCGACCTCGGGGCTCCGCCCGCGCCAGGCCCGCACCGGCCGCGCGTGGCATGTTCTCCTACC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS CCA 72 bp | CGTGGGCTAGGGAGCGGGCGGTGCCGGCATGCACCCTaGGGCCAGGGGATGCCTCAGATGAGCCGCTCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RGLGSGRCRHAP*GQGMPQMSRSP Trigger: GGGAGAGCGGCTCATCTGAGGCATCCCCTGGCCCCAGGGTGCATGCCGGCACCGCCCGCTCCCTAGCCCACG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS GCA 72 bp | GAGCTAGCGTGGGCTAGGGAGCGGGCGGTGCCGGCATaGACCCTGGGGCCAGGGGATGCCTCAGATGAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: ELAWARERAVPA*TLGPGDASDEP Trigger: CGGCTCATCTGAGGCATCCCCTGGCCCCAGGGTGCATGCCGGCACCGCCCGCTCCCTAGCCCACGCTAGCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
||
| CDS CAA 90 bp | GGCCTGGCGCGGGCGGAGCCCCGAGGTCGCAGGTGCGTGTCCTCCTaGTGCGCCGAGGCCGGAAAGCTCTGCTGCCAGATGCTACTCGAG | + |
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Preference number: 6 (lower is better) Translates to: GLARAEPRGRRCVSS*CAEAGKLCCQMLLE Trigger: CTCGAGTAGCATCTGGCAGCAGAGCTTTCCGGCCTCGGCGCACAAGGAGGACACGCACCTGCGACCTCGGGGCTCCGCCCGCGCCAGGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| CDS CAA 72 bp | CGGGCGGAGCCCCGAGGTCGCAGGTGCGTGTCCTCCTaGTGCGCCGAGGCCGGAAAGCTCTGCTGCCAGATG | + |
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Preference number: 6 (lower is better) Translates to: RAEPRGRRCVSS*CAEAGKLCCQM Trigger: CATCTGGCAGCAGAGCTTTCCGGCCTCGGCGCACAAGGAGGACACGCACCTGCGACCTCGGGGCTCCGCCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| CDS GCA 72 bp | CGATCACGTAGCCGGCGGCTGGGGACAACAGGGCGCTaGAGCATAGCAACCAGGACAGGCGACTCCCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: RSRSRRLGTTGR*SIATRTGDSLA Trigger: GGCCAGGGAGTCGCCTGTCCTGGTTGCTATGCTGCAGCGCCCTGTTGTCCCCAGCCGCCGGCTACGTGATCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| CDS GCA 72 bp | CCTTGTGCGCCGAGGCCGGAAAGCTCTGCTGCCAGATaGTACTCGAGTCCTCCAGCAGCGCGGGCAGCGCCT | + |
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Preference number: 6 (lower is better) Translates to: PCAPRPESSAAR*YSSPPAARAAP Trigger: AGGCGCTGCCCGCGCTGCTGGAGGACTCGAGTAGCATCTGGCAGCAGAGCTTTCCGGCCTCGGCGCACAAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| CDS GCA 72 bp | GCGGAGCCCCGAGGTCGCAGGTGCGTGTCCTCCTTGTaGGCCGAGGCCGGAAAGCTCTGCTGCCAGATGCTA | + |
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Preference number: 6 (lower is better) Translates to: AEPRGRRCVSSL*AEAGKLCCQML Trigger: TAGCATCTGGCAGCAGAGCTTTCCGGCCTCGGCGCACAAGGAGGACACGCACCTGCGACCTCGGGGCTCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| CDS GCA 72 bp | GTGTCCTCCTTGTGCGCCGAGGCCGGAAAGCTCTGCTaGCAGATGCTACTCGAGTCCTCCAGCAGCGCGGGC | + |
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Preference number: 6 (lower is better) Translates to: VSSLCAEAGKLC*QMLLESSSSAG Trigger: GCCCGCGCTGCTGGAGGACTCGAGTAGCATCTGGCAGCAGAGCTTTCCGGCCTCGGCGCACAAGGAGGACAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| CDS GCA 72 bp | TGCGTGTCCTCCTTGTGCGCCGAGGCCGGAAAGCTCTaGTGCCAGATGCTACTCGAGTCCTCCAGCAGCGCG | + |
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Preference number: 6 (lower is better) Translates to: CVSSLCAEAGKL*CQMLLESSSSA Trigger: CGCGCTGCTGGAGGACTCGAGTAGCATCTGGCAGCAGAGCTTTCCGGCCTCGGCGCACAAGGAGGACACGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| CDS GCA 72 bp | GTCCTCCAGCAGCGCGGGCAGCGCCTCCTCAGTGGATaGACTGTCCAGCTCCTCATCTACCTCGTTGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: VLQQRGQRLLSG*TVQLLIYLVGD Trigger: GTCACCAACGAGGTAGATGAGGAGCTGGACAGTGCATCCACTGAGGAGGCGCTGCCCGCGCTGCTGGAGGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| CDS TCA 72 bp | AAGGGATCCCTGTGCTGTTGTGGACGGGGCCATCACTaGTGGCCAGGCAGCTCCCAAAGGGCAGTCCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: KGSLCCCGRGHH*WPGSSQRAVLG Trigger: TCCAAGGACTGCCCTTTGGGAGCTGCCTGGCCATCAGTGATGGCCCCGTCCACAACAGCACAGGGATCCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| CDS GCA 72 bp | CACTTCCTCATCCCTGGGTGCCTTGAAAACATGGCTTaGTTGGCGAACTCCACCTCCCCTGGTGGCACCGTG | + |
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Preference number: 6 (lower is better) Translates to: HFLIPGCLENMA*LANSTSPGGTV Trigger: CACGGTGCCACCAGGGGAGGTGGAGTTCGCCAAGCAAGCCATGTTTTCAAGGCACCCAGGGATGAGGAAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| CDS CAA 72 bp | TTCCTCATCCCTGGGTGCCTTGAAAACATGGCTTGCTaGGCGAACTCCACCTCCCCTGGTGGCACCGTGACC | + |
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Preference number: 6 (lower is better) Translates to: FLIPGCLENMAC*ANSTSPGGTVT Trigger: GGTCACGGTGCCACCAGGGGAGGTGGAGTTCGCCAAGCAAGCCATGTTTTCAAGGCACCCAGGGATGAGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| CDS CCA 72 bp | TCACTGATGGCCAGGCAGCTCCCAAAGGGCAGTCCTTaGATCTTTTCGTGGGTGGACACAGTGGCCAGACAG | + |
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Preference number: 6 (lower is better) Translates to: SLMARQLPKGSP*IFSWVDTVARQ Trigger: CTGTCTGGCCACTGTGTCCACCCACGAAAAGATCCAAGGACTGCCCTTTGGGAGCTGCCTGGCCATCAGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| CDS CAA 72 bp | ATCACTGATGGCCAGGCAGCTCCCAAAGGGCAGTCCTaGGATCTTTTCGTGGGTGGACACAGTGGCCAGACA | + |
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Preference number: 6 (lower is better) Translates to: ITDGQAAPKGQS*DLFVGGHSGQT Trigger: TGTCTGGCCACTGTGTCCACCCACGAAAAGATCCAAGGACTGCCCTTTGGGAGCTGCCTGGCCATCAGTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| CDS TCA 72 bp | TCCCTCGGGATGTCAGATACACCTCCATACCATTTCTaGAGCCAGATGTGTTCTACCCACATCTTCATGAAG | + |
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Preference number: 6 (lower is better) Translates to: SLGMSDTPPYHF*SQMCSTHIFMK Trigger: CTTCATGAAGATGTGGGTAGAACACATCTGGCTTCAGAAATGGTATGGAGGTGTATCTGACATCCCGAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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| CDS TCA 72 bp | ATTTCTGAAGCCAGATGTGTTCTACCCACATCTTCATaGAGAACCATTCATACTGTCGGGGCCACTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: ISEARCVLPTSS*RTIHTVGATSS Trigger: TGAGGAAGTGGCCCCGACAGTATGAATGGTTCTTCATGAAGATGTGGGTAGAACACATCTGGCTTCAGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053355.6 |
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