Pregenerated sensors for CREBL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032652Ensembl transcript IDs: ENSMUST00000046303.12, ENSMUST00000111937.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTAGAGAATGGCCTTGGGCTCTGTCCTCCCAGCTTGCTCTCCTCTaGGAAGGAACTGCAGTTAGCCTGCAGTGCCTCGATGGATGGGAG | + |
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Preference number: 1 (lower is better) Translates to: PREWPWALSSQLALL*EGTAVSLQCLDGWE Trigger: CTCCCATCCATCGAGGCACTGCAGGCTAACTGCAGTTCCTTCCCAGAGGAGAGCAAGCTGGGAGGACAGAGCCCAAGGCCATTCTCTAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR CCA 90 bp | AAAGAAGCCAGGCACTTGGCCTCTTCCTGCCCTAGAGAATGGCCTTaGGCTCTGTCCTCCCAGCTTGCTCTCCTCTGGGAAGGAACTGCA | + |
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Preference number: 1 (lower is better) Translates to: KEARHLASSCPREWP*ALSSQLALLWEGTA Trigger: TGCAGTTCCTTCCCAGAGGAGAGCAAGCTGGGAGGACAGAGCCCAAGGCCATTCTCTAGGGCAGGAAGAGGCCAAGTGCCTGGCTTCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR GCA 90 bp | TGTCCTCCCAGCTTGCTCTCCTCTGGGAAGGAACTGCAGTTAGCCTaGAGTGCCTCGATGGATGGGAGTGACAAGAGATGCTGCAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: CPPSLLSSGKELQLA*SASMDGSDKRCCSC Trigger: ACAGCTGCAGCATCTCTTGTCACTCCCATCCATCGAGGCACTGCAGGCTAACTGCAGTTCCTTCCCAGAGGAGAGCAAGCTGGGAGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR TCA 90 bp | GTCGCCCCACTGGCAGAACACGCCATCCCAGTCAGAACACTACATTaGAAACACTTACATTCGAAGGGCCTGAACATCAACAGTCCTTGT | + |
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Preference number: 1 (lower is better) Translates to: VAPLAEHAIPVRTLH*KHLHSKGLNINSPC Trigger: ACAAGGACTGTTGATGTTCAGGCCCTTCGAATGTAAGTGTTTTCAATGTAGTGTTCTGACTGGGATGGCGTGTTCTGCCAGTGGGGCGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR TCA 90 bp | TGGGAAGGAACTGCAGTTAGCCTGCAGTGCCTCGATGGATGGGAGTaGCAAGAGATGCTGCAGCTGTTGGAATCTGGAACAGTGATTAAT | + |
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Preference number: 1 (lower is better) Translates to: WEGTAVSLQCLDGWE*QEMLQLLESGTVIN Trigger: ATTAATCACTGTTCCAGATTCCAACAGCTGCAGCATCTCTTGTCACTCCCATCCATCGAGGCACTGCAGGCTAACTGCAGTTCCTTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR GCA 90 bp | AGCCTAAATGTTGACCTGACCAGATCAACTCCATATTGCACCAGTTaGTCCAGTACGTGGGAAGCAGATGCTAGAGTGGCAGAGTTGGAT | + |
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Preference number: 1 (lower is better) Translates to: SLNVDLTRSTPYCTS*SSTWEADARVAELD Trigger: ATCCAACTCTGCCACTCTAGCATCTGCTTCCCACGTACTGGAGCAACTGGTGCAATATGGAGTTGATCTGGTCAGGTCAACATTTAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR GCA 90 bp | CATTCGTCCTCCATAGACATCACACCATTGGCTTTGATCACGGACTaGCTTTTATATGATCTTCACCTCATCGTATCTGAAGCCACAGGT | + |
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Preference number: 1 (lower is better) Translates to: HSSSIDITPLALITD*LLYDLHLIVSEATG Trigger: ACCTGTGGCTTCAGATACGATGAGGTGAAGATCATATAAAAGGCAGTCCGTGATCAAAGCCAATGGTGTGATGTCTATGGAGGACGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR CCA 90 bp | CAAAGCGTAATCAACATTCACTCCAAAGTCCATCTCTTCTACTTGTaGATGACCGTGTGGTTACAAGGACAACCTGGGATGACCCTGAAA | + |
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Preference number: 1 (lower is better) Translates to: QSVINIHSKVHLFYL*MTVWLQGQPGMTLK Trigger: TTTCAGGGTCATCCCAGGTTGTCCTTGTAACCACACGGTCATCCACAAGTAGAAGAGATGGACTTTGGAGTGAATGTTGATTACGCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR CCA 90 bp | AACATTCACTCCAAAGTCCATCTCTTCTACTTGTGGATGACCGTGTaGTTACAAGGACAACCTGGGATGACCCTGAAACTACAAGTACAA | + |
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Preference number: 1 (lower is better) Translates to: NIHSKVHLFYLWMTV*LQGQPGMTLKLQVQ Trigger: TTGTACTTGTAGTTTCAGGGTCATCCCAGGTTGTCCTTGTAACCACACGGTCATCCACAAGTAGAAGAGATGGACTTTGGAGTGAATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR CCA 90 bp | CATATTGCACCAGTTGCTCCAGTACGTGGGAAGCAGATGCTAGAGTaGCAGAGTTGGATTGGTGTGAATGTGCAAATATATTTTCTCCTT | + |
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Preference number: 1 (lower is better) Translates to: HIAPVAPVRGKQMLE*QSWIGVNVQIYFLL Trigger: AAGGAGAAAATATATTTGCACATTCACACCAATCCAACTCTGCCACTCTAGCATCTGCTTCCCACGTACTGGAGCAACTGGTGCAATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR GCA 90 bp | ATCAAAAGGTTGGACATGCCTGTAACTATGATACCTCCCTTCAACTaGCAGTCTGTGGCAAATACTTCTTTTTCTGGAAGTCAAATTCCT | + |
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Preference number: 1 (lower is better) Translates to: IKRLDMPVTMIPPFN*QSVANTSFSGSQIP Trigger: AGGAATTTGACTTCCAGAAAAAGAAGTATTTGCCACAGACTGGCAGTTGAAGGGAGGTATCATAGTTACAGGCATGTCCAACCTTTTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR-3UTR TCA 90 bp | CCAGGCACGTCTGAACCGCAGCTTGCAGGCTGCGTATACCTCAGAATAACTAGGACCCCATGCCTCAGCTaGGTGCACAAGCAAATGTGT | + |
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Preference number: 2 (lower is better) Translates to: PGTSEPQLAGCVYLRITRTPCLS*VHKQMC Trigger: ACACATTTGCTTGTGCACTCAGCTGAGGCATGGGGT...CCTAGTTATTCTGAGGTATACGCAGCCTGCAAGCTGCGGTTCAGACGTGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR-3UTR TCA 90 bp | ATGGCCTTGGGCTCTGTCCTCCCAGCTTGCTCTCCTCTGGGAAGGAACTGCAGTATGTCAGGGAAGAACTaGGTATTCTGCCAACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: MALGSVLPACSPLGRNCSMSGKN*VFCQQQ Trigger: CTGCTGTTGGCAGAATACTCAGTTCTTCCCTGACAT...ACTGCAGTTCCTTCCCAGAGGAGAGCAAGCTGGGAGGACAGAGCCCAAGGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR CAA 90 bp | CGCAAGGACCTTCCCGACGCATCATCACACATTACGGTAGAAACTTaGGGTTCACAGAGACGCTTACTGAGCAGTAAGCAGAAAATGGAG | + |
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Preference number: 2 (lower is better) Translates to: RKDLPDASSHITVET*GSQRRLLSSKQKME Trigger: CTCCATTTTCTGCTTACTGCTCAGTAAGCGTCTCTGTGAACCCAAAGTTTCTACCGTAATGTGTGATGATGCGTCGGGAAGGTCCTTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046303.12 ENSMUST00000111937.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGATCTTCAGCTAACAGAAGGCAACTGGTCAGGAGACATGCCTGTCAAGAGACACAGAGACGCTTACTaGGCAGTAAGCAGAAAATGG | + |
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Preference number: 2 (lower is better) Translates to: RDLQLTEGNWSGDMPVKRHRDAY*AVSRKW Trigger: CCATTTTCTGCTTACTGCTCAGTAAGCGTCTCTGTG...TCTCTTGACAGGCATGTCTCCTGACCAGTTGCCTTCTGTTAGCTGAAGATCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR-3UTR CCA 90 bp | AATGCCCATTTTTCTAAAACACAGCGAATCCCAGCAAGCTGGGCAGGTGCTCTGCAGCTTATGCTGGAATaGCTCACAGACAAGCAAACA | + |
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Preference number: 2 (lower is better) Translates to: NAHFSKTQRIPASWAGALQLMLE*LTDKQT Trigger: TGTTTGCTTGTCTGTGAGCCATTCCAGCATAAGCTG...CAGAGCACCTGCCCAGCTTGCTGGGATTCGCTGTGTTTTAGAAAAATGGGCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR CAA 90 bp | ACTCAAAGCGTAATCAACATTCACTCCAAAGTCCATCTCTTCTACTaGTGGATGACCGTGTGGTTACAAGGACAACCTGGGATGACCCTG | + |
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Preference number: 2 (lower is better) Translates to: TQSVINIHSKVHLFY*WMTVWLQGQPGMTL Trigger: CAGGGTCATCCCAGGTTGTCCTTGTAACCACACGGTCATCCACAAGTAGAAGAGATGGACTTTGGAGTGAATGTTGATTACGCTTTGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR CAA 90 bp | AAAGTCCTGCCCCATTCGTCCTCCATAGACATCACACCATTGGCTTaGATCACGGACTGCCTTTTATATGATCTTCACCTCATCGTATCT | + |
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Preference number: 2 (lower is better) Translates to: KVLPHSSSIDITPLA*ITDCLLYDLHLIVS Trigger: AGATACGATGAGGTGAAGATCATATAAAAGGCAGTCCGTGATCAAAGCCAATGGTGTGATGTCTATGGAGGACGAATGGGGCAGGACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR-3UTR TCA 90 bp | AAACATTCAATTCTCAGGCTTCAAGTCACAACATCAAAAGGTTGGACATGCCTGAGAGGAAGAGCAAAATaGGGCTGTCAGGGGCCTTGT | + |
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Preference number: 2 (lower is better) Translates to: KHSILRLQVTTSKGWTCLRGRAK*GCQGPC Trigger: ACAAGGCCCCTGACAGCCTCATTTTGCTCTTCCTCT...CAGGCATGTCCAACCTTTTGATGTTGTGACTTGAAGCCTGAGAATTGAATGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR-3UTR TCA 90 bp | AGTCACAACATCAAAAGGTTGGACATGCCTGTAACTATGATACCTCCCTTCAACGAACCTCTCCTACTATaGGCTTTGCCCCTAACCACA | + |
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Preference number: 2 (lower is better) Translates to: SHNIKRLDMPVTMIPPFNEPLLL*ALPLTT Trigger: TGTGGTTAGGGGCAAAGCTCATAGTAGGAGAGGTTC...GTTGAAGGGAGGTATCATAGTTACAGGCATGTCCAACCTTTTGATGTTGTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR-3UTR CCA 90 bp | GCTTCAAGCACAGTGAGACATTCCACTGAGAGGCCACACTCATCCTGGAATGTTTCAACTGCCAGTCTGTaGCAAATACTTCTTTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: ASSTVRHSTERPHSSWNVSTASL*QILLFL Trigger: CAGAAAAAGAAGTATTTGCCACAGACTGGCAGTTGA...AACATTCCAGGATGAGTGTGGCCTCTCAGTGGAATGTCTCACTGTGCTTGAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR-3UTR CCA 90 bp | AAACATTCAATTCTCAGGCTTCAAGTCACAACATCAAAAGGTTGGACATGCCTGACTCACAGCTTATGCTaGAATGGCTCACAGACAAGC | + |
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Preference number: 2 (lower is better) Translates to: KHSILRLQVTTSKGWTCLTHSLC*NGSQTS Trigger: GCTTGTCTGTGAGCCATTCCAGCATAAGCTGTGAGT...CAGGCATGTCCAACCTTTTGATGTTGTGACTTGAAGCCTGAGAATTGAATGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR-3UTR GCA 90 bp | AAACATTCAATTCTCAGGCTTCAAGTCACAACATCAAAAGGTTGGACATGCCTGGCTTTGATCACGGACTaGCTTTTATATGATCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: KHSILRLQVTTSKGWTCLALITD*LLYDLH Trigger: GTGAAGATCATATAAAAGGCAGTCCGTGATCAAAGC...CAGGCATGTCCAACCTTTTGATGTTGTGACTTGAAGCCTGAGAATTGAATGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR GCA 72 bp | CAGGCCCCAGGCTGCAGTACAGGGTGCAGCTCAGGATaGCCCAGCACAGTGGGGGCACAGGCTAAAGCAGGT | + |
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Preference number: 3 (lower is better) Translates to: QAPGCSTGCSSG*PSTVGAQAKAG Trigger: ACCTGCTTTAGCCTGTGCCCCCACTGTGCTGGGGCATCCTGAGCTGCACCCTGTACTGCAGCCTGGGGCCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR GCA 72 bp | CCACATGCGACTCCAAATACCCACCAGGCCCCAGGCTaGAGTACAGGGTGCAGCTCAGGATGCCCCAGCACA | + |
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Preference number: 3 (lower is better) Translates to: PHATPNTHQAPG*STGCSSGCPST Trigger: TGTGCTGGGGCATCCTGAGCTGCACCCTGTACTGCAGCCTGGGGCCTGGTGGGTATTTGGAGTCGCATGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR CCA 72 bp | TGGCCTTGGGCTCTGTCCTCCCAGCTTGCTCTCCTCTaGGAAGGAACTGCAGTTAGCCTGCAGTGCCTCGAT | + |
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Preference number: 3 (lower is better) Translates to: WPWALSSQLALL*EGTAVSLQCLD Trigger: ATCGAGGCACTGCAGGCTAACTGCAGTTCCTTCCCAGAGGAGAGCAAGCTGGGAGGACAGAGCCCAAGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR GCA 72 bp | CAAATTCGGCTGTGCTGGGAACCATACAGAGCCACATaGGACTCCAAATACCCACCAGGCCCCAGGCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: QIRLCWEPYRAT*DSKYPPGPRLQ Trigger: CTGCAGCCTGGGGCCTGGTGGGTATTTGGAGTCGCATGTGGCTCTGTATGGTTCCCAGCACAGCCGAATTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR CCA 72 bp | CTGCCAACAGCAGCAGCCATAGCGTCAGCAGCAGGATaGCCTGTGCTCTACACAGCAGATACCCAGTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: LPTAAAIASAAG*PVLYTADTQSQ Trigger: CTGAGACTGGGTATCTGCTGTGTAGAGCACAGGCCATCCTGCTGCTGACGCTATGGCTGCTGCTGTTGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR GCA 72 bp | AGAGCAGGTCTGAAGGTCGCCGGCAAGTCTAAGTGCTaGGCAAGGACCTTCCCGACGCATCATCACACATTA | + |
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Preference number: 3 (lower is better) Translates to: RAGLKVAGKSKC*ARTFPTHHHTL Trigger: TAATGTGTGATGATGCGTCGGGAAGGTCCTTGCGCAGCACTTAGACTTGCCGGCGACCTTCAGACCTGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR GCA 72 bp | ATTAACCATGAAAGCCACAGGGCTAAGGTGCAAACGTaGGCTTCCATCCACTTCCTCCGCTCCCACAGGCTC | + |
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Preference number: 3 (lower is better) Translates to: INHESHRAKVQT*ASIHFLRSHRL Trigger: GAGCCTGTGGGAGCGGAGGAAGTGGATGGAAGCGCACGTTTGCACCTTAGCCCTGTGGCTTTCATGGTTAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR GCA 72 bp | GGGAGAAGGGCCAGCACAGTAGCTGAGCAATCACCATaGCCCCTTCAGATGCTGAGGGCCATTATCTTGGTT | + |
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Preference number: 3 (lower is better) Translates to: GRRASTVAEQSP*PLQMLRAIILV Trigger: AACCAAGATAATGGCCCTCAGCATCTGAAGGGGGCATGGTGATTGCTCAGCTACTGTGCTGGCCCTTCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR GCA 72 bp | AGCTTGCTCTCCTCTGGGAAGGAACTGCAGTTAGCCTaGAGTGCCTCGATGGATGGGAGTGACAAGAGATGC | + |
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Preference number: 3 (lower is better) Translates to: SLLSSGKELQLA*SASMDGSDKRC Trigger: GCATCTCTTGTCACTCCCATCCATCGAGGCACTGCAGGCTAACTGCAGTTCCTTCCCAGAGGAGAGCAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR CCA 72 bp | CCTGTGTTTCTATCACCAGCCAAAGCAGACCCACTGTaGGGCAAAGACGCTGAAGTTACAGCTGGTGCCGCT | + |
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Preference number: 3 (lower is better) Translates to: PVFLSPAKADPL*GKDAEVTAGAA Trigger: AGCGGCACCAGCTGTAACTTCAGCGTCTTTGCCCCACAGTGGGTCTGCTTTGGCTGGTGATAGAAACACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR CCA 72 bp | CCCCTAACCACACTCCACGTGCAAATTCGGCTGTGCTaGGAACCATACAGAGCCACATGCGACTCCAAATAC | + |
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Preference number: 3 (lower is better) Translates to: PLTTLHVQIRLC*EPYRATCDSKY Trigger: GTATTTGGAGTCGCATGTGGCTCTGTATGGTTCCCAGCACAGCCGAATTTGCACGTGGAGTGTGGTTAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR TCA 72 bp | AGCAACACAAAGTTCTGCAAAGTAAGAGTCTACGACTaGGTCGCCCCACTGGCAGAACACGCCATCCCAGTC | + |
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Preference number: 3 (lower is better) Translates to: SNTKFCKVRVYD*VAPLAEHAIPV Trigger: GACTGGGATGGCGTGTTCTGCCAGTGGGGCGACTCAGTCGTAGACTCTTACTTTGCAGAACTTTGTGTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR TCA 72 bp | ACTGCAGTTAGCCTGCAGTGCCTCGATGGATGGGAGTaGCAAGAGATGCTGCAGCTGTTGGAATCTGGAACA | + |
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Preference number: 3 (lower is better) Translates to: TAVSLQCLDGWE*QEMLQLLESGT Trigger: TGTTCCAGATTCCAACAGCTGCAGCATCTCTTGTCACTCCCATCCATCGAGGCACTGCAGGCTAACTGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR GCA 72 bp | GTTGACCTGACCAGATCAACTCCATATTGCACCAGTTaGTCCAGTACGTGGGAAGCAGATGCTAGAGTGGCA | + |
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Preference number: 3 (lower is better) Translates to: VDLTRSTPYCTS*SSTWEADARVA Trigger: TGCCACTCTAGCATCTGCTTCCCACGTACTGGAGCAACTGGTGCAATATGGAGTTGATCTGGTCAGGTCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR TCA 72 bp | AACTACAAGTACAACCTGCAGAGGCTTCAAGCACAGTaGGACATTCCACTGAGAGGCCACACTCATCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: NYKYNLQRLQAQ*DIPLRGHTHPG Trigger: TCCAGGATGAGTGTGGCCTCTCAGTGGAATGTCTCACTGTGCTTGAAGCCTCTGCAGGTTGTACTTGTAGTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR TCA 72 bp | TGCCCCCTTCAGATGCTGAGGGCCATTATCTTGGTTTaGTGGCTCCAAAACACTAAAGAGATACAGGCCCTA | + |
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Preference number: 3 (lower is better) Translates to: CPLQMLRAIILV*WLQNTKEIQAL Trigger: TAGGGCCTGTATCTCTTTAGTGTTTTGGAGCCATCAAACCAAGATAATGGCCCTCAGCATCTGAAGGGGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR TCA 72 bp | GACAAGAGATGCTGCAGCTGTTGGAATCTGGAACAGTaGTTAATTAGATCACAGATTCGGGAGAAGGGCCAG | + |
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Preference number: 3 (lower is better) Translates to: DKRCCSCWNLEQ*LIRSQIREKGQ Trigger: CTGGCCCTTCTCCCGAATCTGTGATCTAATTAATCACTGTTCCAGATTCCAACAGCTGCAGCATCTCTTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR TCA 72 bp | CATTCTGTACGCTTTAGAAAAACCCCATGCCTCAGCTaGGTGCACAAGCAAATGTGTGTGCCAATGTGTGTA | + |
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Preference number: 3 (lower is better) Translates to: HSVRFRKTPCLS*VHKQMCVPMCV Trigger: TACACACATTGGCACACACATTTGCTTGTGCACTCAGCTGAGGCATGGGGTTTTTCTAAAGCGTACAGAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR TCA 72 bp | GTGAGAGAAGCGAGTAAAGTAGAAATTCCTTGTCTCTaGACCTCTCCTACTATGAGCTTTGCCCCTAACCAC | + |
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Preference number: 3 (lower is better) Translates to: VREASKVEIPCL*TSPTMSFAPNH Trigger: GTGGTTAGGGGCAAAGCTCATAGTAGGAGAGGTTCAGAGACAAGGAATTTCTACTTTACTCGCTTCTCTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR CCA 72 bp | ATCAACATTCACTCCAAAGTCCATCTCTTCTACTTGTaGATGACCGTGTGGTTACAAGGACAACCTGGGATG | + |
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Preference number: 3 (lower is better) Translates to: INIHSKVHLFYL*MTVWLQGQPGM Trigger: CATCCCAGGTTGTCCTTGTAACCACACGGTCATCCACAAGTAGAAGAGATGGACTTTGGAGTGAATGTTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR TCA 72 bp | CCAGCTTTCATAAATACAGTCAGAGGAAGAGCAAAATaGGGCTGTCAGGGGCCTTGTATTGGGCTTTGTTAT | + |
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Preference number: 3 (lower is better) Translates to: PAFINTVRGRAK*GCQGPCIGLCY Trigger: ATAACAAAGCCCAATACAAGGCCCCTGACAGCCTCATTTTGCTCTTCCTCTGACTGTATTTATGAAAGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR CCA 72 bp | CCAGTACGTGGGAAGCAGATGCTAGAGTGGCAGAGTTaGATTGGTGTGAATGTGCAAATATATTTTCTCCTT | + |
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Preference number: 3 (lower is better) Translates to: PVRGKQMLEWQS*IGVNVQIYFLL Trigger: AAGGAGAAAATATATTTGCACATTCACACCAATCCAACTCTGCCACTCTAGCATCTGCTTCCCACGTACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR TCA 72 bp | GAACACTACATTGAAAACACTTACATTCGAAGGGCCTaGACATCAACAGTCCTTGTCTCCACTTATGGTCCT | + |
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Preference number: 3 (lower is better) Translates to: EHYIENTYIRRA*TSTVLVSTYGP Trigger: AGGACCATAAGTGGAGACAAGGACTGTTGATGTTCAGGCCCTTCGAATGTAAGTGTTTTCAATGTAGTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR GCA 72 bp | TTGGACATGCCTGTAACTATGATACCTCCCTTCAACTaGCAGTCTGTGGCAAATACTTCTTTTTCTGGAAGT | + |
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Preference number: 3 (lower is better) Translates to: LDMPVTMIPPFN*QSVANTSFSGS Trigger: ACTTCCAGAAAAAGAAGTATTTGCCACAGACTGGCAGTTGAAGGGAGGTATCATAGTTACAGGCATGTCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR GCA 72 bp | TCCATAGACATCACACCATTGGCTTTGATCACGGACTaGCTTTTATATGATCTTCACCTCATCGTATCTGAA | + |
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Preference number: 3 (lower is better) Translates to: SIDITPLALITD*LLYDLHLIVSE Trigger: TTCAGATACGATGAGGTGAAGATCATATAAAAGGCAGTCCGTGATCAAAGCCAATGGTGTGATGTCTATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| 3UTR CCA 72 bp | GAAGTGTGTATATCTGTTAATACTCACAGCTTATGCTaGAATGGCTCACAGACAAGCAAACATTACTCAAGT | + |
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Preference number: 3 (lower is better) Translates to: EVCISVNTHSLC*NGSQTSKHYSS Trigger: ACTTGAGTAATGTTTGCTTGTCTGTGAGCCATTCCAGCATAAGCTGTGAGTATTAACAGATATACACACTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
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| CDS-3UTR CCA 90 bp | CCTGTGCTCTACACAGCAGATACCCAGTCTCAGCAGCTACGTTCATTCTGTACGACCTCAGCTTTTTCCTaGCCCGGCATTCTCTCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PVLYTADTQSQQLRSFCTTSAFS*PGILSH Trigger: GTGCGAGAGAATGCCGGGCCAGGAAAAAGCTGAGGT...CGTACAGAATGAACGTAGCTGCTGAGACTGGGTATCTGCTGTGTAGAGCACAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
||
| CDS-3UTR TCA 90 bp | AGGGATCTTCAGCTAACAGAAGGCAACTGGTCAGGAGACATGCCTGTCAAGAGATTTGGGATGCCTGCTTaGGCTCTGCTGAGGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RDLQLTEGNWSGDMPVKRFGMPA*ALLRLA Trigger: AGCAAGCCTCAGCAGAGCTCAAGCAGGCATCCCAAA...TCTCTTGACAGGCATGTCTCCTGACCAGTTGCCTTCTGTTAGCTGAAGATCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
||
| CDS-3UTR GCA 90 bp | TTGGCCCTAGCCAGCTTTCATAAATACAGTCAGAGGAAGAGCAAAATGAGGCTGCAGCTTTGGGATGCCTaGTTGAGCTCTGCTGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LALASFHKYSQRKSKMRLQLWDA*LSSAEA Trigger: AGCCTCAGCAGAGCTCAAGCAGGCATCCCAAAGCTG...CAGCCTCATTTTGCTCTTCCTCTGACTGTATTTATGAAAGCTGGCTAGGGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
||
| CDS-3UTR GCA 90 bp | AGTAAGCAGAAAATGGAGCCAAGAAGCAAAGTCCTGCCCCATTCGTCCTCCATACAGGCTTCTTCACTTTaGCTCCAACCACCTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SKQKMEPRSKVLPHSSSIQASSL*LQPPCC Trigger: ACAGCAAGGTGGTTGGAGGCAAAGTGAAGAAGCCTG...TATGGAGGACGAATGGGGCAGGACTTTGCTTCTTGGCTCCATTTTCTGCTTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046303.12 ENSMUST00000111937.2 |
||
| CDS-3UTR GCA 90 bp | AATGCCCATTTTTCTAAAACACAGCGAATCCCAGCAAGCTGGGCAGGTGCTCTGTTTCCCTTGGTCCATTaGCATGCACCACTGCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: NAHFSKTQRIPASWAGALFPLVH*HAPLLV Trigger: TACAAGCAGTGGTGCATGGCAATGGACCAAGGGAAA...CAGAGCACCTGCCCAGCTTGCTGGGATTCGCTGTGTTTTAGAAAAATGGGCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
||
| CDS-3UTR CCA 90 bp | TTCGTCCTCCATAGACATCACACCATTGGCTTTGATCACGGACTGCCTTTTATAACCTCAGCTTTTTCCTaGCCCGGCATTCTCTCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FVLHRHHTIGFDHGLPFITSAFS*PGILSH Trigger: GTGCGAGAGAATGCCGGGCCAGGAAAAAGCTGAGGT...TATAAAAGGCAGTCCGTGATCAAAGCCAATGGTGTGATGTCTATGGAGGACGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046303.12 ENSMUST00000111937.2 |
||
| 3UTR CAA 72 bp | CTTCCCGACGCATCATCACACATTACGGTAGAAACTTaGGGTTCACAGAGACGCTTACTGAGCAGTAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPDASSHITVET*GSQRRLLSSKQ Trigger: CTGCTTACTGCTCAGTAAGCGTCTCTGTGAACCCAAAGTTTCTACCGTAATGTGTGATGATGCGTCGGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046303.12 ENSMUST00000111937.2 |
||
| CDS-3UTR CCA 90 bp | GAAACTTTGGGTTCACAGAGACGCTTACTGAGCAGTAAGCAGAAAATGGAGCCACTTTCAAGTCGATTTTaGCTGGCTTCCGTCCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ETLGSQRRLLSSKQKMEPLSSRF*LASVLA Trigger: AGCGAGGACGGAAGCCAGCCAAAATCGACTTGAAAG...TGGCTCCATTTTCTGCTTACTGCTCAGTAAGCGTCTCTGTGAACCCAAAGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046303.12 ENSMUST00000111937.2 |
||
| CDS-3UTR GCA 90 bp | GACATCACACCATTGGCTTTGATCACGGACTGCCTTTTATATGATCTTCACCTCCAGGCTTCTTCACTTTaGCTCCAACCACCTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DITPLALITDCLLYDLHLQASSL*LQPPCC Trigger: ACAGCAAGGTGGTTGGAGGCAAAGTGAAGAAGCCTG...GAGGTGAAGATCATATAAAAGGCAGTCCGTGATCAAAGCCAATGGTGTGATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
||
| CDS-3UTR CCA 90 bp | GTAGAAACTTTGGGTTCACAGAGACGCTTACTGAGCAGTAAGCAGAAAATGGAGCTTTCAAGTCGATTTTaGCTGGCTTCCGTCCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VETLGSQRRLLSSKQKMELSSRF*LASVLA Trigger: AGCGAGGACGGAAGCCAGCCAAAATCGACTTGAAAG...CTCCATTTTCTGCTTACTGCTCAGTAAGCGTCTCTGTGAACCCAAAGTTTCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046303.12 ENSMUST00000111937.2 |
||
| CDS-3UTR CCA 90 bp | GACATCACACCATTGGCTTTGATCACGGACTGCCTTTTATATGATCTTCACCTCGAAGGGATTTTCCCTTaGTCCATTGCCATGCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: DITPLALITDCLLYDLHLEGIFP*SIAMHH Trigger: GTGGTGCATGGCAATGGACCAAGGGAAAATCCCTTC...GAGGTGAAGATCATATAAAAGGCAGTCCGTGATCAAAGCCAATGGTGTGATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
||
| 3UTR CAA 72 bp | GTCCTGCCCCATTCGTCCTCCATAGACATCACACCATaGGCTTTGATCACGGACTGCCTTTTATATGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLPHSSSIDITP*ALITDCLLYDL Trigger: AAGATCATATAAAAGGCAGTCCGTGATCAAAGCCAATGGTGTGATGTCTATGGAGGACGAATGGGGCAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
||
| 3UTR CAA 72 bp | ACTGGCAGAACACGCCATCCCAGTCAGAACACTACATaGAAAACACTTACATTCGAAGGGCCTGAACATCAA | + |
|
Preference number: 4 (lower is better) Translates to: TGRTRHPSQNTT*KTLTFEGPEHQ Trigger: TTGATGTTCAGGCCCTTCGAATGTAAGTGTTTTCAATGTAGTGTTCTGACTGGGATGGCGTGTTCTGCCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
||
| 3UTR CAA 72 bp | GTAATCAACATTCACTCCAAAGTCCATCTCTTCTACTaGTGGATGACCGTGTGGTTACAAGGACAACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VINIHSKVHLFY*WMTVWLQGQPG Trigger: CCCAGGTTGTCCTTGTAACCACACGGTCATCCACAAGTAGAAGAGATGGACTTTGGAGTGAATGTTGATTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
||
| CDS-3UTR GCA 90 bp | GACATCACACCATTGGCTTTGATCACGGACTGCCTTTTATATGATCTTCACCTCATTGCCATGCACCACTaGTTGTACATTTCCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DITPLALITDCLLYDLHLIAMHH*LYISSS Trigger: GGAACTGGAAATGTACAAGCAGTGGTGCATGGCAAT...GAGGTGAAGATCATATAAAAGGCAGTCCGTGATCAAAGCCAATGGTGTGATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
||
| 3UTR CAA 72 bp | TCCAGTACGTGGGAAGCAGATGCTAGAGTGGCAGAGTaGGATTGGTGTGAATGTGCAAATATATTTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSTWEADARVAE*DWCECANIFSP Trigger: AGGAGAAAATATATTTGCACATTCACACCAATCCAACTCTGCCACTCTAGCATCTGCTTCCCACGTACTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
||
| 3UTR CAA 72 bp | TTCAATTCTCAGGCTTCAAGTCACAACATCAAAAGGTaGGACATGCCTGTAACTATGATACCTCCCTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: FNSQASSHNIKR*DMPVTMIPPFN Trigger: GTTGAAGGGAGGTATCATAGTTACAGGCATGTCCAACCTTTTGATGTTGTGACTTGAAGCCTGAGAATTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
||
| 3UTR CAA 72 bp | ATAAAGGCTGAGAACCACGGGAGACAAACAGCCTATTaGGTTTCTTTTTGTAGGGTGATTAAAAACAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: IKAENHGRQTAY*VSFCRVIKNKK Trigger: TTTCTTGTTTTTAATCACCCTACAAAAAGAAACCAAATAGGCTGTTTGTCTCCCGTGGTTCTCAGCCTTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
||
| CDS CCA 90 bp | GACTGGATACCAACTCCTCCAAGTACTGGTACCTCAGCTTTTTCCTaGCCCGGCATTCTCTCGCACTCTGCCGGCTTCGCTCAAGTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: DWIPTPPSTGTSAFS*PGILSHSAGFAQVS Trigger: CGAAACTTGAGCGAAGCCGGCAGAGTGCGAGAGAATGCCGGGCCAGGAAAAAGCTGAGGTACCAGTACTTGGAGGAGTTGGTATCCAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046303.12 ENSMUST00000111937.2 |
||
| CDS-3UTR CAA 90 bp | GCAGTGCCTCGATGGATGGGAGTGACAAGAGATGCTGCAGCTGTTGGAATCTGGCCAGGCTTCTTCACTTaGCCTCCAACCACCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AVPRWMGVTRDAAAVGIWPGFFT*PPTTLL Trigger: CAGCAAGGTGGTTGGAGGCAAAGTGAAGAAGCCTGG...CCAGATTCCAACAGCTGCAGCATCTCTTGTCACTCCCATCCATCGAGGCACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
||
| CDS GCA 90 bp | TACTGGTACCTCAGCTTTTTCCTGGCCCGGCATTCTCTCGCACTCTaGCGGCTTCGCTCAAGTTTCGCTTTCAAGTCGATTTTGGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: YWYLSFFLARHSLAL*RLRSSFAFKSILAG Trigger: GCCAGCCAAAATCGACTTGAAAGCGAAACTTGAGCGAAGCCGGCAGAGTGCGAGAGAATGCCGGGCCAGGAAAAAGCTGAGGTACCAGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046303.12 ENSMUST00000111937.2 |
||
| CDS CCA 90 bp | TCGCACTCTGCCGGCTTCGCTCAAGTTTCGCTTTCAAGTCGATTTTaGCTGGCTTCCGTCCTCGCTTACCAGGCTTCTTCACTTTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SHSAGFAQVSLSSRF*LASVLAYQASSLCL Trigger: GAGGCAAAGTGAAGAAGCCTGGTAAGCGAGGACGGAAGCCAGCCAAAATCGACTTGAAAGCGAAACTTGAGCGAAGCCGGCAGAGTGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046303.12 ENSMUST00000111937.2 |
||
| CDS CCA 90 bp | ACTCTGCCGGCTTCGCTCAAGTTTCGCTTTCAAGTCGATTTTGGCTaGCTTCCGTCCTCGCTTACCAGGCTTCTTCACTTTGCCTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: TLPASLKFRFQVDFG*LPSSLTRLLHFASN Trigger: GTTGGAGGCAAAGTGAAGAAGCCTGGTAAGCGAGGACGGAAGCCAGCCAAAATCGACTTGAAAGCGAAACTTGAGCGAAGCCGGCAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046303.12 ENSMUST00000111937.2 |
||
| CDS CCA 90 bp | GCACATATAGCTCTTTCCCGACTGGATACCAACTCCTCCAAGTACTaGTACCTCAGCTTTTTCCTGGCCCGGCATTCTCTCGCACTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AHIALSRLDTNSSKY*YLSFFLARHSLALC Trigger: GCAGAGTGCGAGAGAATGCCGGGCCAGGAAAAAGCTGAGGTACCAGTACTTGGAGGAGTTGGTATCCAGTCGGGAAAGAGCTATATGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046303.12 ENSMUST00000111937.2 |
||
| CDS-3UTR CAA 90 bp | AACCCCATGCCTCAGCTGAGTGCACAAGCAAATGTGTGTGCCAATGTGTGTACAGCTTTCAAGTCGATTTaGGCTGGCTTCCGTCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: NPMPQLSAQANVCANVCTAFKSI*AGFRPR Trigger: GCGAGGACGGAAGCCAGCCAAAATCGACTTGAAAGC...TGTACACACATTGGCACACACATTTGCTTGTGCACTCAGCTGAGGCATGGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
||
| CDS-3UTR CAA 90 bp | TTGGGTTCACAGAGACGCTTACTGAGCAGTAAGCAGAAAATGGAGCCAAGAAGCGCTTTCAAGTCGATTTaGGCTGGCTTCCGTCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: LGSQRRLLSSKQKMEPRSAFKSI*AGFRPR Trigger: GCGAGGACGGAAGCCAGCCAAAATCGACTTGAAAGC...GCTTCTTGGCTCCATTTTCTGCTTACTGCTCAGTAAGCGTCTCTGTGAACCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046303.12 ENSMUST00000111937.2 |
||
| CDS GCA 90 bp | AGCCACAGGTTCAATTCCCCACCACATTTCCAGTTCCTCTCGGAGTaGACATATAGCTCTTTCCCGACTGGATACCAACTCCTCCAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SHRFNSPPHFQFLSE*TYSSFPTGYQLLQV Trigger: TACTTGGAGGAGTTGGTATCCAGTCGGGAAAGAGCTATATGTGCACTCCGAGAGGAACTGGAAATGTGGTGGGGAATTGAACCTGTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111937.2 |
||
| CDS CCA 90 bp | TCCTCGCCAGTGAGTAGGGCCCTTATTTCAGAAGGGATTTTCCCTTaGTCCATTGCCATGCACCACTGCTTGTACATTTCCAGTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSPVSRALISEGIFP*SIAMHHCLYISSSS Trigger: AGAGGAACTGGAAATGTACAAGCAGTGGTGCATGGCAATGGACCAAGGGAAAATCCCTTCTGAAATAAGGGCCCTACTCACTGGCGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
||
| CDS-3UTR CAA 90 bp | GAAACTTTGGGTTCACAGAGACGCTTACTGAGCAGTAAGCAGAAAATGGAGCCACCAGGCTTCTTCACTTaGCCTCCAACCACCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ETLGSQRRLLSSKQKMEPPGFFT*PPTTLL Trigger: CAGCAAGGTGGTTGGAGGCAAAGTGAAGAAGCCTGG...TGGCTCCATTTTCTGCTTACTGCTCAGTAAGCGTCTCTGTGAACCCAAAGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046303.12 ENSMUST00000111937.2 |
||
| CDS-3UTR CAA 90 bp | AAAGTCCTGCCCCATTCGTCCTCCATAGACATCACACCATTGGCTTTGATCACGAGAAGGGATTTTCCCTaGGTCCATTGCCATGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: KVLPHSSSIDITPLALITRRDFP*VHCHAP Trigger: TGGTGCATGGCAATGGACCAAGGGAAAATCCCTTCT...CGTGATCAAAGCCAATGGTGTGATGTCTATGGAGGACGAATGGGGCAGGACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
||
| CDS-3UTR CAA 90 bp | GACATCACACCATTGGCTTTGATCACGGACTGCCTTTTATATGATCTTCACCTCTCTGTCTTCCCAGCTTaGGGATGCCTGCTTGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DITPLALITDCLLYDLHLSVFPA*GCLLEL Trigger: GAGCTCAAGCAGGCATCCCAAAGCTGGGAAGACAGA...GAGGTGAAGATCATATAAAAGGCAGTCCGTGATCAAAGCCAATGGTGTGATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
||
| CDS-3UTR CAA 90 bp | TTCGTCCTCCATAGACATCACACCATTGGCTTTGATCACGGACTGCCTTTTATATTTTCCCTTGGTCCATaGCCATGCACCACTGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: FVLHRHHTIGFDHGLPFIFSLGP*PCTTAC Trigger: ACAAGCAGTGGTGCATGGCAATGGACCAAGGGAAAA...TATAAAAGGCAGTCCGTGATCAAAGCCAATGGTGTGATGTCTATGGAGGACGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
||
| CDS TCA 72 bp | GTCTTCCCAGCTTTGGGATGCCTGCTTGAGCTCTGCTaGGGCTTGCTCTGCTCCTCGCCAGTGAGTAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VFPALGCLLELC*GLLCSSPVSRA Trigger: GGCCCTACTCACTGGCGAGGAGCAGAGCAAGCCTCAGCAGAGCTCAAGCAGGCATCCCAAAGCTGGGAAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
||
| CDS CCA 72 bp | CCAACTCCTCCAAGTACTGGTACCTCAGCTTTTTCCTaGCCCGGCATTCTCTCGCACTCTGCCGGCTTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: PTPPSTGTSAFS*PGILSHSAGFA Trigger: AGCGAAGCCGGCAGAGTGCGAGAGAATGCCGGGCCAGGAAAAAGCTGAGGTACCAGTACTTGGAGGAGTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046303.12 ENSMUST00000111937.2 |
||
| CDS CAA 90 bp | CTCGCACTCTGCCGGCTTCGCTCAAGTTTCGCTTTCAAGTCGATTTaGGCTGGCTTCCGTCCTCGCTTACCAGGCTTCTTCACTTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LALCRLRSSFAFKSI*AGFRPRLPGFFTLP Trigger: AGGCAAAGTGAAGAAGCCTGGTAAGCGAGGACGGAAGCCAGCCAAAATCGACTTGAAAGCGAAACTTGAGCGAAGCCGGCAGAGTGCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046303.12 ENSMUST00000111937.2 |
||
| CDS GCA 72 bp | CTCAGCTTTTTCCTGGCCCGGCATTCTCTCGCACTCTaGCGGCTTCGCTCAAGTTTCGCTTTCAAGTCGATT | + |
|
Preference number: 6 (lower is better) Translates to: LSFFLARHSLAL*RLRSSFAFKSI Trigger: AATCGACTTGAAAGCGAAACTTGAGCGAAGCCGGCAGAGTGCGAGAGAATGCCGGGCCAGGAAAAAGCTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046303.12 ENSMUST00000111937.2 |
||
| CDS CCA 72 bp | GCCGGCTTCGCTCAAGTTTCGCTTTCAAGTCGATTTTaGCTGGCTTCCGTCCTCGCTTACCAGGCTTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: AGFAQVSLSSRF*LASVLAYQASS Trigger: TGAAGAAGCCTGGTAAGCGAGGACGGAAGCCAGCCAAAATCGACTTGAAAGCGAAACTTGAGCGAAGCCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046303.12 ENSMUST00000111937.2 |
||
| CDS CCA 72 bp | GCTCTTTCCCGACTGGATACCAACTCCTCCAAGTACTaGTACCTCAGCTTTTTCCTGGCCCGGCATTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ALSRLDTNSSKY*YLSFFLARHSL Trigger: GAGAGAATGCCGGGCCAGGAAAAAGCTGAGGTACCAGTACTTGGAGGAGTTGGTATCCAGTCGGGAAAGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046303.12 ENSMUST00000111937.2 |
||
| CDS CAA 72 bp | TGCCGGCTTCGCTCAAGTTTCGCTTTCAAGTCGATTTaGGCTGGCTTCCGTCCTCGCTTACCAGGCTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CRLRSSFAFKSI*AGFRPRLPGFF Trigger: GAAGAAGCCTGGTAAGCGAGGACGGAAGCCAGCCAAAATCGACTTGAAAGCGAAACTTGAGCGAAGCCGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046303.12 ENSMUST00000111937.2 |
||
| CDS GCA 72 bp | GCACCACTGCTTGTACATTTCCAGTTCCTCTCGGAGTaGACATATAGCTCTTTCCCGACTGGATACCAACTC | + |
|
Preference number: 6 (lower is better) Translates to: APLLVHFQFLSE*TYSSFPTGYQL Trigger: GAGTTGGTATCCAGTCGGGAAAGAGCTATATGTGCACTCCGAGAGGAACTGGAAATGTACAAGCAGTGGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
||
| CDS GCA 72 bp | GAAGGGATTTTCCCTTGGTCCATTGCCATGCACCACTaGTTGTACATTTCCAGTTCCTCTCGGAGTGCACAT | + |
|
Preference number: 6 (lower is better) Translates to: EGIFPWSIAMHH*LYISSSSRSAH Trigger: ATGTGCACTCCGAGAGGAACTGGAAATGTACAAGCAGTGGTGCATGGCAATGGACCAAGGGAAAATCCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
||
| CDS CCA 72 bp | GCTTCGCTCAAGTTTCGCTTTCAAGTCGATTTTGGCTaGCTTCCGTCCTCGCTTACCAGGCTTCTTCACTTT | + |
|
Preference number: 6 (lower is better) Translates to: ASLKFRFQVDFG*LPSSLTRLLHF Trigger: AAAGTGAAGAAGCCTGGTAAGCGAGGACGGAAGCCAGCCAAAATCGACTTGAAAGCGAAACTTGAGCGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046303.12 ENSMUST00000111937.2 |
||
| CDS GCA 72 bp | GGCCCTTATTTCAGAAGGGATTTTCCCTTGGTCCATTaGCATGCACCACTGCTTGTACATTTCCAGTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GPYFRRDFPLVH*HAPLLVHFQFL Trigger: GAGGAACTGGAAATGTACAAGCAGTGGTGCATGGCAATGGACCAAGGGAAAATCCCTTCTGAAATAAGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
||
| CDS GCA 72 bp | TTCAATTCCCCACCACATTTCCAGTTCCTCTCGGAGTaGACATATAGCTCTTTCCCGACTGGATACCAACTC | + |
|
Preference number: 6 (lower is better) Translates to: FNSPPHFQFLSE*TYSSFPTGYQL Trigger: GAGTTGGTATCCAGTCGGGAAAGAGCTATATGTGCACTCCGAGAGGAACTGGAAATGTGGTGGGGAATTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111937.2 |
||
| CDS CCA 72 bp | GTGAGTAGGGCCCTTATTTCAGAAGGGATTTTCCCTTaGTCCATTGCCATGCACCACTGCTTGTACATTTCC | + |
|
Preference number: 6 (lower is better) Translates to: VSRALISEGIFP*SIAMHHCLYIS Trigger: GGAAATGTACAAGCAGTGGTGCATGGCAATGGACCAAGGGAAAATCCCTTCTGAAATAAGGGCCCTACTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
||
| CDS CAA 72 bp | GGGATTTTCCCTTGGTCCATTGCCATGCACCACTGCTaGTACATTTCCAGTTCCTCTCGGAGTGCACATATA | + |
|
Preference number: 6 (lower is better) Translates to: GIFPWSIAMHHC*YISSSSRSAHI Trigger: TATATGTGCACTCCGAGAGGAACTGGAAATGTACAAGCAGTGGTGCATGGCAATGGACCAAGGGAAAATCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
||
| CDS CAA 72 bp | GGGCCCTTATTTCAGAAGGGATTTTCCCTTGGTCCATaGCCATGCACCACTGCTTGTACATTTCCAGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GPLFQKGFSLGP*PCTTACTFPVP Trigger: AGGAACTGGAAATGTACAAGCAGTGGTGCATGGCAATGGACCAAGGGAAAATCCCTTCTGAAATAAGGGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046303.12 |
||