Pregenerated sensors for CREB3L4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000027938

Ensembl transcript IDs: ENSMUST00000029547.10, ENSMUST00000107369.2

Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR TCA 90 bp	TTCCCTTTGACCTTACCACAAAGAAGAAATGAAATCACAAATGTATaGCAAGCATTTGAGGTGCCCTGCCACATGATAAAAGGTGATAGG	+
Preference number: 1 (lower is better) Translates to: FPLTLPQRRNEITNV*QAFEVPCHMIKGDR Trigger: CCTATCACCTTTTATCATGTGGCAGGGCACCTCAAATGCTTGTCATACATTTGTGATTTCATTTCTTCTTTGTGGTAAGGTCAAAGGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029547.10 ENSMUST00000107369.2
CDS TCA 90 bp	ATCGTCAGGTTCACTCTTCTGAAGGCCCCTGGTCACCGGGACCTTTaGCGCGGGACCGTTGAATCCCAGCTCCAGGAAGGATCCCGTCGA	+
Preference number: 5 (lower is better) Translates to: IVRFTLLKAPGHRDL*RGTVESQLQEGSRR Trigger: TCGACGGGATCCTTCCTGGAGCTGGGATTCAACGGTCCCGCGTCAAAGGTCCCGGTGACCAGGGGCCTTCAGAAGAGTGAACCTGACGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029547.10 ENSMUST00000107369.2
CDS TCA 90 bp	TCTTCTGAAGGCCCCTGGTCACCGGGACCTTTGACGCGGGACCGTTaGATCCCAGCTCCAGGAAGGATCCCGTCGAGAAGATATCTTCTG	+
Preference number: 5 (lower is better) Translates to: SSEGPWSPGPLTRDR*IPAPGRIPSRRYLL Trigger: CAGAAGATATCTTCTCGACGGGATCCTTCCTGGAGCTGGGATTCAACGGTCCCGCGTCAAAGGTCCCGGTGACCAGGGGCCTTCAGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029547.10 ENSMUST00000107369.2
CDS GCA 90 bp	TTCTTCATCTGTCAGGAACAGATGATGTTGGCAGGACGGCATGGCTaGAGGAGGTGCTGGGGCTCTGGTGCTGACCCTAGGCAGGATATG	+
Preference number: 5 (lower is better) Translates to: FFICQEQMMLAGRHG*RRCWGSGADPRQDM Trigger: CATATCCTGCCTAGGGTCAGCACCAGAGCCCCAGCACCTCCTGCAGCCATGCCGTCCTGCCAACATCATCTGTTCCTGACAGATGAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029547.10 ENSMUST00000107369.2
CDS TCA 90 bp	CCTTCTTGTGCCAGCAGTTGCTTTTCTTCATCTGTCAGGAACAGATaGTGTTGGCAGGACGGCATGGCTGCAGGAGGTGCTGGGGCTCTG	+
Preference number: 5 (lower is better) Translates to: PSCASSCFSSSVRNR*CWQDGMAAGGAGAL Trigger: CAGAGCCCCAGCACCTCCTGCAGCCATGCCGTCCTGCCAACATCATCTGTTCCTGACAGATGAAGAAAAGCAACTGCTGGCACAAGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029547.10 ENSMUST00000107369.2
CDS TCA 90 bp	TTGGGATCGATAAAGAGGTTCAGGAAATCGTCAGGTTCACTCTTCTaGAGGCCCCTGGTCACCGGGACCTTTGACGCGGGACCGTTGAAT	+
Preference number: 5 (lower is better) Translates to: LGSIKRFRKSSGSLF*RPLVTGTFDAGPLN Trigger: ATTCAACGGTCCCGCGTCAAAGGTCCCGGTGACCAGGGGCCTTCAGAAGAGTGAACCTGACGATTTCCTGAACCTCTTTATCGATCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029547.10 ENSMUST00000107369.2
CDS TCA 90 bp	AAGATGTTCTGCCTCTCCAGCTCCTGGACCTTTCTCTGTAGTTTCTaGTTCTGTTCCGAACAGGCCGCCACTCTGCTCTCCAGCCCATCT	+
Preference number: 5 (lower is better) Translates to: KMFCLSSSWTFLCSF*FCSEQAATLLSSPS Trigger: AGATGGGCTGGAGAGCAGAGTGGCGGCCTGTTCGGAACAGAATCAGAAACTACAGAGAAAGGTCCAGGAGCTGGAGAGGCAGAACATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029547.10 ENSMUST00000107369.2
CDS GCA 90 bp	CCTTTCTCTGTAGTTTCTGATTCTGTTCCGAACAGGCCGCCACTCTaGTCTCCAGCCCATCTAAGTATTCTTTCTTCCGCCGCCGGCTGT	+
Preference number: 5 (lower is better) Translates to: PFSVVSDSVPNRPPL*SPAHLSILSSAAGC Trigger: ACAGCCGGCGGCGGAAGAAAGAATACTTAGATGGGCTGGAGAGCAGAGTGGCGGCCTGTTCGGAACAGAATCAGAAACTACAGAGAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029547.10 ENSMUST00000107369.2
CDS GCA 90 bp	CAGGATATGTCTATGCGAATCGGAGGGCAGTCCACTGACTGTGCATaGATCAGGGACCATAAGTGCAGGGGTCCACTGATCTATCTGAAT	+
Preference number: 5 (lower is better) Translates to: QDMSMRIGGQSTDCA*IRDHKCRGPLIYLN Trigger: ATTCAGATAGATCAGTGGACCCCTGCACTTATGGTCCCTGATGCATGCACAGTCAGTGGACTGCCCTCCGATTCGCATAGACATATCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029547.10 ENSMUST00000107369.2
CDS CAA 72 bp	AGGCCCCTGGTCACCGGGACCTTTGACGCGGGACCGTaGAATCCCAGCTCCAGGAAGGATCCCGTCGAGAAG	+
Preference number: 6 (lower is better) Translates to: RPLVTGTFDAGP*NPSSRKDPVEK Trigger: CTTCTCGACGGGATCCTTCCTGGAGCTGGGATTCAACGGTCCCGCGTCAAAGGTCCCGGTGACCAGGGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029547.10 ENSMUST00000107369.2
CDS TCA 72 bp	TTCACTCTTCTGAAGGCCCCTGGTCACCGGGACCTTTaGCGCGGGACCGTTGAATCCCAGCTCCAGGAAGGA	+
Preference number: 6 (lower is better) Translates to: FTLLKAPGHRDL*RGTVESQLQEG Trigger: TCCTTCCTGGAGCTGGGATTCAACGGTCCCGCGTCAAAGGTCCCGGTGACCAGGGGCCTTCAGAAGAGTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029547.10 ENSMUST00000107369.2
CDS GCA 72 bp	GGGGCTCTGGTGCTGACCCTAGGCAGGATATGTCTATaGGAATCGGAGGGCAGTCCACTGACTGTGCATGCA	+
Preference number: 6 (lower is better) Translates to: GALVLTLGRICL*ESEGSPLTVHA Trigger: TGCATGCACAGTCAGTGGACTGCCCTCCGATTCGCATAGACATATCCTGCCTAGGGTCAGCACCAGAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029547.10 ENSMUST00000107369.2
CDS CCA 72 bp	CAGCTCCAGGAAGGATCCCGTCGAGAAGATATCTTCTaGGGGTTCCAGCAACTCAGGGCACCCGAGCTCCAT	+
Preference number: 6 (lower is better) Translates to: QLQEGSRREDIF*GFQQLRAPELH Trigger: ATGGAGCTCGGGTGCCCTGAGTTGCTGGAACCCCCAGAAGATATCTTCTCGACGGGATCCTTCCTGGAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029547.10 ENSMUST00000107369.2
CDS CAA 72 bp	CAGTTGCTTTTCTTCATCTGTCAGGAACAGATGATGTaGGCAGGACGGCATGGCTGCAGGAGGTGCTGGGGC	+
Preference number: 6 (lower is better) Translates to: QLLFFICQEQMM*AGRHGCRRCWG Trigger: GCCCCAGCACCTCCTGCAGCCATGCCGTCCTGCCAACATCATCTGTTCCTGACAGATGAAGAAAAGCAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029547.10 ENSMUST00000107369.2
CDS TCA 72 bp	ATAAAGAGGTTCAGGAAATCGTCAGGTTCACTCTTCTaGAGGCCCCTGGTCACCGGGACCTTTGACGCGGGA	+
Preference number: 6 (lower is better) Translates to: IKRFRKSSGSLF*RPLVTGTFDAG Trigger: TCCCGCGTCAAAGGTCCCGGTGACCAGGGGCCTTCAGAAGAGTGAACCTGACGATTTCCTGAACCTCTTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029547.10 ENSMUST00000107369.2
CDS TCA 72 bp	GCCAGCAGTTGCTTTTCTTCATCTGTCAGGAACAGATaGTGTTGGCAGGACGGCATGGCTGCAGGAGGTGCT	+
Preference number: 6 (lower is better) Translates to: ASSCFSSSVRNR*CWQDGMAAGGA Trigger: AGCACCTCCTGCAGCCATGCCGTCCTGCCAACATCATCTGTTCCTGACAGATGAAGAAAAGCAACTGCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029547.10 ENSMUST00000107369.2
CDS CAA 90 bp	GAGGGGCAGGTGAGAGGGCAGAGTAATCCCTTCTTGTGCCAGCAGTaGCTTTTCTTCATCTGTCAGGAACAGATGATGTTGGCAGGACGG	+
Preference number: 6 (lower is better) Translates to: EGQVRGQSNPFLCQQ*LFFICQEQMMLAGR Trigger: CCGTCCTGCCAACATCATCTGTTCCTGACAGATGAAGAAAAGCAACTGCTGGCACAAGAAGGGATTACTCTGCCCTCTCACCTGCCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029547.10 ENSMUST00000107369.2
CDS GCA 72 bp	GTAGTTTCTGATTCTGTTCCGAACAGGCCGCCACTCTaGTCTCCAGCCCATCTAAGTATTCTTTCTTCCGCC	+
Preference number: 6 (lower is better) Translates to: VVSDSVPNRPPL*SPAHLSILSSA Trigger: GGCGGAAGAAAGAATACTTAGATGGGCTGGAGAGCAGAGTGGCGGCCTGTTCGGAACAGAATCAGAAACTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029547.10 ENSMUST00000107369.2
CDS CAA 90 bp	ACCCCACTGTCCCTACCAGGAGATGTTTCTGAGCAGTGTATCATATaGGGATCGATAAAGAGGTTCAGGAAATCGTCAGGTTCACTCTTC	+
Preference number: 6 (lower is better) Translates to: TPLSLPGDVSEQCII*GSIKRFRKSSGSLF Trigger: GAAGAGTGAACCTGACGATTTCCTGAACCTCTTTATCGATCCCAATATGATACACTGCTCAGAAACATCTCCTGGTAGGGACAGTGGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029547.10 ENSMUST00000107369.2
CDS CAA 90 bp	TTTGTTGAACCATTTGTAGTTGGGGCTTCAGGTAGCTCCTCCAGTTaGGACTTTAGCACTGGACTCTCCAGGTTTTCTGTTACGTTCTCG	+
Preference number: 6 (lower is better) Translates to: FVEPFVVGASGSSSS*DFSTGLSRFSVTFS Trigger: CGAGAACGTAACAGAAAACCTGGAGAGTCCAGTGCTAAAGTCCAAACTGGAGGAGCTACCTGAAGCCCCAACTACAAATGGTTCAACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029547.10 ENSMUST00000107369.2
CDS TCA 72 bp	TTCAGAGACCCCACTGTCCCTACCAGGAGATGTTTCTaGGCAGTGTATCATATTGGGATCGATAAAGAGGTT	+
Preference number: 6 (lower is better) Translates to: FRDPTVPTRRCF*AVYHIGIDKEV Trigger: AACCTCTTTATCGATCCCAATATGATACACTGCTCAGAAACATCTCCTGGTAGGGACAGTGGGGTCTCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029547.10 ENSMUST00000107369.2
CDS CAA 72 bp	TCCCTACCAGGAGATGTTTCTGAGCAGTGTATCATATaGGGATCGATAAAGAGGTTCAGGAAATCGTCAGGT	+
Preference number: 6 (lower is better) Translates to: SLPGDVSEQCII*GSIKRFRKSSG Trigger: ACCTGACGATTTCCTGAACCTCTTTATCGATCCCAATATGATACACTGCTCAGAAACATCTCCTGGTAGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029547.10 ENSMUST00000107369.2

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