Pregenerated sensors for CREB3L3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035041Ensembl transcript IDs: ENSMUST00000117422.2
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GCCAGCCTGGTCTACAAGAGGAAGACCTCTCTCCAAAAGAGGAAGATGGAAGTTCATTTCCCCCTGACTTaGGGGTCAGCTTCTCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: ASLVYKRKTSLQKRKMEVHFPLT*GSASPG Trigger: TCCTGGAGAAGCTGACCCCCAAGTCAGGGGGAAATG...AACTTCCATCTTCCTCTTTTGGAGAGAGGTCTTCCTCTTGTAGACCAGGCTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGTGGTGCTCACACCTTTAATCCTAGCACTTGAGACACAGAAGCAGGTAGAGATGGGTAAAGGGCTCTaGTTCCTGTTCTACCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: EVVLTPLILALETQKQVEMGKGL*FLFYPR Trigger: CCTGGGGTAGAACAGGAACCAGAGCCCTTTACCCAT...CTCTACCTGCTTCTGTGTCTCAAGTGCTAGGATTAAAGGTGTGAGCACCACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| 3UTR-3UTR GCA 90 bp | GGTCTACAAGAGGAAGACCTCTCTCCAAAAGAGGAAGATGGAAGTTTGTGGGCTGCCTTCATGTCTCTGTaGCTGGAAACCCCATTTCCC | + |
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Preference number: 2 (lower is better) Translates to: GLQEEDLSPKEEDGSLWAAFMSL*LETPFP Trigger: GGGAAATGGGGTTTCCAGGCACAGAGACATGAAGGC...AGCCCACAAACTTCCATCTTCCTCTTTTGGAGAGAGGTCTTCCTCTTGTAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| 3UTR-3UTR GCA 90 bp | AGGTCACAAAGTCTTAGAAAAGGAGGTGGTGCTCACACCTTTAATCCTAGCACTAGGTCCCAGAGACTCTaGATCTTCCTGGTGGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: RSQSLRKGGGAHTFNPSTRSQRL*IFLVVR Trigger: CCTGACCACCAGGAAGATGCAGAGTCTCTGGGACCT...AGTGCTAGGATTAAAGGTGTGAGCACCACCTCCTTTTCTAAGACTTTGTGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| 3UTR-3UTR CCA 90 bp | ACCTCTCTCCAAAAGAGGAAGATGGAAGTTTGTGGGCTAAACCTTGATTTGGGATCTGCATCTTCCTGGTaGTCAGGGGAGAGTAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: TSLQKRKMEVCGLNLDLGSASSW*SGESRS Trigger: GCTCCTACTCTCCCCTGACCACCAGGAAGATGCAGA...TCCCAAATCAAGGTTTAGCCCACAAACTTCCATCTTCCTCTTTTGGAGAGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| 3UTR CCA 72 bp | AGGGTTCAGGTGTTAGTGTCAGTCTGTCTGCATGTATaGGTAAAGGGCTCTGGTTCCTGTTCTACCCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: RVQVLVSVCLHV*VKGSGSCSTPG Trigger: CCCTGGGGTAGAACAGGAACCAGAGCCCTTTACCCATACATGCAGACAGACTGACACTAACACCTGAACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| 3UTR TCA 72 bp | CCAAAAGAGGAAGATGGAAGTTTGTGGGCTAAACCTTaGTTTGGGAAGCCCAGGTCCCAGAGACTCTGCATC | + |
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Preference number: 3 (lower is better) Translates to: PKEEDGSLWAKP*FGKPRSQRLCI Trigger: GATGCAGAGTCTCTGGGACCTGGGCTTCCCAAATCAAGGTTTAGCCCACAAACTTCCATCTTCCTCTTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| 3UTR-3UTR CAA 90 bp | AGGAAGACCTCTCTCCAAAAGAGGAAGATGGAAGTTTGTGGGCTAAACCTTGATGTAGGAGCTCCATGGTaGGAGGTTAGGGTTCAGGTG | + |
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Preference number: 3 (lower is better) Translates to: RKTSLQKRKMEVCGLNLDVGAPW*EVRVQV Trigger: CACCTGAACCCTAACCTCCAACCATGGAGCTCCTAC...ATCAAGGTTTAGCCCACAAACTTCCATCTTCCTCTTTTGGAGAGAGGTCTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR CCA 90 bp | GAGACACAGAAGCAGGTAGAGCTCTGTAAATCTGAGGCCAGCCTGGTCTACAAGCCCAGTCCAGCAGGGTaGCCCGTCCCAGGTCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: ETQKQVELCKSEASLVYKPSPAG*PVPGPL Trigger: CAGAGGACCTGGGACGGGCCACCCTGCTGGACTGGG...CTTGTAGACCAGGCTGGCCTCAGATTTACAGAGCTCTACCTGCTTCTGTGTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR TCA 90 bp | GAGGTGGTGCTCACACCTTTAATCCTAGCACTTGAGACACAGAAGCAGGTAGAGCCTCAGATCCTGGGGTaGCATCGGGAGCCACGCGGG | + |
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Preference number: 4 (lower is better) Translates to: EVVLTPLILALETQKQVEPQILG*HREPRG Trigger: CCCGCGTGGCTCCCGATGTCACCCCAGGATCTGAGG...CTCTACCTGCTTCTGTGTCTCAAGTGCTAGGATTAAAGGTGTGAGCACCACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR GCA 90 bp | GAGACACAGAAGCAGGTAGAGCTCTGTAAATCTGAGGCCAGCCTGGTCTACAAGGCTCAGGGCATGGGGTaGTGGGCAGATAGGAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: ETQKQVELCKSEASLVYKAQGMG*WADRRG Trigger: GCCCCTCCTATCTGCCCAGCACCCCATGCCCTGAGC...CTTGTAGACCAGGCTGGCCTCAGATTTACAGAGCTCTACCTGCTTCTGTGTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR GCA 90 bp | TGGTCTACAAGAGGAAGACCTCTCTCCAAAAGAGGAAGATGGAAGTTTGTGGGCACCAGCTCCTGGCAGTaGCCACTCCCAGGTCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: WSTRGRPLSKRGRWKFVGTSSWQ*PLPGPS Trigger: GCTGGGACCTGGGAGTGGGCACTGCCAGGAGCTGGT...GCCCACAAACTTCCATCTTCCTCTTTTGGAGAGAGGTCTTCCTCTTGTAGACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR GCA 90 bp | GAGGTGGTGCTCACACCTTTAATCCTAGCACTTGAGACACAGAAGCAGGTAGAGGCCAAGGAATGCTGTTaGAAGTCCCCGCTGCCACCG | + |
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Preference number: 4 (lower is better) Translates to: EVVLTPLILALETQKQVEAKECC*KSPLPP Trigger: CGGTGGCAGCGGGGACTTGCAACAGCATTCCTTGGC...CTCTACCTGCTTCTGTGTCTCAAGTGCTAGGATTAAAGGTGTGAGCACCACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR CCA 90 bp | AGCTCTGTAAATCTGAGGCCAGCCTGGTCTACAAGAGGAAGACCTCTCTCCAAAGGTCCTCTGTGGAGTTaGCCAGCACCAGGGTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: SSVNLRPAWSTRGRPLSKGPLWS*PAPGWS Trigger: ACTCCACCCTGGTGCTGGCCAACTCCACAGAGGACC...TTTGGAGAGAGGTCTTCCTCTTGTAGACCAGGCTGGCCTCAGATTTACAGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR GCA 90 bp | GCCAGCCTGGTCTACAAGAGGAAGACCTCTCTCCAAAAGAGGAAGATGGAAGTTGAGGCAGCCAAGGAATaGTGTTGCAAGTCCCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: ASLVYKRKTSLQKRKMEVEAAKE*CCKSPL Trigger: CAGCGGGGACTTGCAACAGCATTCCTTGGCTGCCTC...AACTTCCATCTTCCTCTTTTGGAGAGAGGTCTTCCTCTTGTAGACCAGGCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR GCA 90 bp | GAGACACAGAAGCAGGTAGAGCTCTGTAAATCTGAGGCCAGCCTGGTCTACAAGTGGACCACAAGTGCCTaGAGGTGTTTCAGCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: ETQKQVELCKSEASLVYKWTTSA*RCFSCS Trigger: GGAGCAGCTGAAACACCTGCAGGCACTTGTGGTCCA...CTTGTAGACCAGGCTGGCCTCAGATTTACAGAGCTCTACCTGCTTCTGTGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR CCA 90 bp | CTCACACCTTTAATCCTAGCACTTGAGACACAGAAGCAGGTAGAGCTCTGTAAACAGGGCATGGGGTGCTaGGCAGATAGGAGGGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LTPLILALETQKQVELCKQGMGC*ADRRGR Trigger: CCTGCCCCTCCTATCTGCCCAGCACCCCATGCCCTG...TTTACAGAGCTCTACCTGCTTCTGTGTCTCAAGTGCTAGGATTAAAGGTGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR CCA 90 bp | TGGTCTACAAGAGGAAGACCTCTCTCCAAAAGAGGAAGATGGAAGTTTGTGGGCTGGAGGCTCAGGGCATaGGGTGCTGGGCAGATAGGA | + |
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Preference number: 4 (lower is better) Translates to: WSTRGRPLSKRGRWKFVGWRLRA*GAGQIG Trigger: TCCTATCTGCCCAGCACCCCATGCCCTGAGCCTCCA...GCCCACAAACTTCCATCTTCCTCTTTTGGAGAGAGGTCTTCCTCTTGTAGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR CCA 90 bp | AGGAAGACCTCTCTCCAAAAGAGGAAGATGGAAGTTTGTGGGCTAAACCTTGATTTGGTGAGAGGCAGCTaGGTGGGGAGGGTCACCCCC | + |
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Preference number: 4 (lower is better) Translates to: RKTSLQKRKMEVCGLNLDLVRGS*VGRVTP Trigger: GGGGGTGACCCTCCCCACCCAGCTGCCTCTCACCAA...ATCAAGGTTTAGCCCACAAACTTCCATCTTCCTCTTTTGGAGAGAGGTCTTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR TCA 90 bp | TGGTCTACAAGAGGAAGACCTCTCTCCAAAAGAGGAAGATGGAAGTTTGTGGGCGTTCCTCATACTTGGTaGGAGGCAGCTGGGTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: WSTRGRPLSKRGRWKFVGVPHTW*EAAGWG Trigger: TCCCCACCCAGCTGCCTCTCACCAAGTATGAGGAAC...GCCCACAAACTTCCATCTTCCTCTTTTGGAGAGAGGTCTTCCTCTTGTAGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR GCA 90 bp | TTAGAAAAGGAGGTGGTGCTCACACCTTTAATCCTAGCACTTGAGACACAGAAGGGACCGCTATGCAGGTaGCTGCATGGGCTGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LEKEVVLTPLILALETQKGPLCR*LHGLAC Trigger: GCAAGCCAGCCCATGCAGGCACCTGCATAGCGGTCC...CTTCTGTGTCTCAAGTGCTAGGATTAAAGGTGTGAGCACCACCTCCTTTTCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR CCA 90 bp | GAGACACAGAAGCAGGTAGAGCTCTGTAAATCTGAGGCCAGCCTGGTCTACAAGACCATAATGGAGAGCTaGGGTCAGAGTCTCCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: ETQKQVELCKSEASLVYKTIMES*GQSLQV Trigger: GACCTGGAGACTCTGACCCCAGCTCTCCATTATGGT...CTTGTAGACCAGGCTGGCCTCAGATTTACAGAGCTCTACCTGCTTCTGTGTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR CCA 90 bp | AGGTCACAAAGTCTTAGAAAAGGAGGTGGTGCTCACACCTTTAATCCTAGCACTCCAGGTCCCAGCAGCTaGGAGGCAGCCAAGGAATGC | + |
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Preference number: 4 (lower is better) Translates to: RSQSLRKGGGAHTFNPSTPGPSS*EAAKEC Trigger: GCATTCCTTGGCTGCCTCCCAGCTGCTGGGACCTGG...AGTGCTAGGATTAAAGGTGTGAGCACCACCTCCTTTTCTAAGACTTTGTGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR CCA 90 bp | GGTCTACAAGAGGAAGACCTCTCTCCAAAAGAGGAAGATGGAAGTTTGTGGGCTGGCTTGCTGGTTGACTaGACCACAAGTGCCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: GLQEEDLSPKEEDGSLWAGLLVD*TTSACR Trigger: CCTGCAGGCACTTGTGGTCCAGTCAACCAGCAAGCC...AGCCCACAAACTTCCATCTTCCTCTTTTGGAGAGAGGTCTTCCTCTTGTAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR CCA 90 bp | ACCTCTCTCCAAAAGAGGAAGATGGAAGTTTGTGGGCTAAACCTTGATTTGGGAGAGGAAGGGCCTTTGTaGGGGGTACCAACGTCGGGC | + |
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Preference number: 4 (lower is better) Translates to: TSLQKRKMEVCGLNLDLGEEGPL*GVPTSG Trigger: GCCCGACGTTGGTACCCCCCACAAAGGCCCTTCCTC...TCCCAAATCAAGGTTTAGCCCACAAACTTCCATCTTCCTCTTTTGGAGAGAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR CCA 90 bp | CTCACACCTTTAATCCTAGCACTTGAGACACAGAAGCAGGTAGAGCTCTGTAAAGTCCCAGGTCCTCTGTaGAGTTGGCCAGCACCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LTPLILALETQKQVELCKVPGPL*SWPAPG Trigger: CCCTGGTGCTGGCCAACTCCACAGAGGACCTGGGAC...TTTACAGAGCTCTACCTGCTTCTGTGTCTCAAGTGCTAGGATTAAAGGTGTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR TCA 90 bp | ACCTCTCTCCAAAAGAGGAAGATGGAAGTTTGTGGGCTAAACCTTGATTTGGGACCTTGCTCCCTGGTGTaGCACCTGGCTACCGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: TSLQKRKMEVCGLNLDLGPCSLV*HLATVL Trigger: CAACACGGTAGCCAGGTGTCACACCAGGGAGCAAGG...TCCCAAATCAAGGTTTAGCCCACAAACTTCCATCTTCCTCTTTTGGAGAGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR TCA 90 bp | TCTGTAAATCTGAGGCCAGCCTGGTCTACAAGAGGAAGACCTCTCTCCAAAAGACAGGTCAATGGCCACTaGGGACTCCTGGACTTGTGT | + |
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Preference number: 4 (lower is better) Translates to: SVNLRPAWSTRGRPLSKRQVNGH*GLLDLC Trigger: ACACAAGTCCAGGAGTCCTCAGTGGCCATTGACCTG...TCTTTTGGAGAGAGGTCTTCCTCTTGTAGACCAGGCTGGCCTCAGATTTACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR TCA 90 bp | AAAGTCTTAGAAAAGGAGGTGGTGCTCACACCTTTAATCCTAGCACTTGAGACATTCCCCAGTCTGCACTaGGACCACCGGAGGAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: KVLEKEVVLTPLILALETFPSLH*DHRRKG Trigger: GCCCTTCCTCCGGTGGTCTCAGTGCAGACTGGGGAA...TGTCTCAAGTGCTAGGATTAAAGGTGTGAGCACCACCTCCTTTTCTAAGACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR GCA 90 bp | TGGTCTACAAGAGGAAGACCTCTCTCCAAAAGAGGAAGATGGAAGTTTGTGGGCGTAGATCCTCAGAGATaGCACTGTCACTGTCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: WSTRGRPLSKRGRWKFVGVDPQR*HCHCQR Trigger: CCGCTGACAGTGACAGTGGCATCTCTGAGGATCTAC...GCCCACAAACTTCCATCTTCCTCTTTTGGAGAGAGGTCTTCCTCTTGTAGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR CCA 90 bp | CTCACACCTTTAATCCTAGCACTTGAGACACAGAAGCAGGTAGAGCTCTGTAAACTGGACTTGTGTCCTTaGAGGCTCAGGGCATGGGGT | + |
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Preference number: 4 (lower is better) Translates to: LTPLILALETQKQVELCKLDLCP*RLRAWG Trigger: ACCCCATGCCCTGAGCCTCCAAGGACACAAGTCCAG...TTTACAGAGCTCTACCTGCTTCTGTGTCTCAAGTGCTAGGATTAAAGGTGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR GCA 90 bp | AGGAAGACCTCTCTCCAAAAGAGGAAGATGGAAGTTTGTGGGCTAAACCTTGATCTCAGGATGCCGTCCTaGCGATCAAACAGGAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: RKTSLQKRKMEVCGLNLDLRMPS*RSNRRS Trigger: TGACCTCCTGTTTGATCGGCAGGACGGCATCCTGAG...ATCAAGGTTTAGCCCACAAACTTCCATCTTCCTCTTTTGGAGAGAGGTCTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR GCA 90 bp | TTAGAAAAGGAGGTGGTGCTCACACCTTTAATCCTAGCACTTGAGACACAGAAGTGTTGGCTGGTTCAGTaGCACTACGAGGAGGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: LEKEVVLTPLILALETQKCWLVQ*HYEEGC Trigger: ACACCCCTCCTCGTAGTGGCACTGAACCAGCCAACA...CTTCTGTGTCTCAAGTGCTAGGATTAAAGGTGTGAGCACCACCTCCTTTTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR GCA 90 bp | CAGCCTGGTCTACAAGAGGAAGACCTCTCTCCAAAAGAGGAAGATGGAAGTTTGAAAATTTCCCCAGTCTaGACTGAGACCACCGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: QPGLQEEDLSPKEEDGSLKISPV*TETTGG Trigger: TCCTCCGGTGGTCTCAGTGCAGACTGGGGAAATTTT...CAAACTTCCATCTTCCTCTTTTGGAGAGAGGTCTTCCTCTTGTAGACCAGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR CCA 90 bp | AAAGTCTTAGAAAAGGAGGTGGTGCTCACACCTTTAATCCTAGCACTTGAGACAATGCAGGTGCCTGCATaGGCTGGCTTGCTGGTTGAC | + |
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Preference number: 4 (lower is better) Translates to: KVLEKEVVLTPLILALETMQVPA*AGLLVD Trigger: GTCAACCAGCAAGCCAGCCCATGCAGGCACCTGCAT...TGTCTCAAGTGCTAGGATTAAAGGTGTGAGCACCACCTCCTTTTCTAAGACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR CCA 90 bp | AAAGTCTTAGAAAAGGAGGTGGTGCTCACACCTTTAATCCTAGCACTTGAGACAGACCCTAAGCCACCTTaGTACCCAGGACAGCCACAT | + |
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Preference number: 4 (lower is better) Translates to: KVLEKEVVLTPLILALETDPKPP*YPGQPH Trigger: ATGTGGCTGTCCTGGGTACCAAGGTGGCTTAGGGTC...TGTCTCAAGTGCTAGGATTAAAGGTGTGAGCACCACCTCCTTTTCTAAGACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR GCA 90 bp | TGGTCTACAAGAGGAAGACCTCTCTCCAAAAGAGGAAGATGGAAGTTTGTGGGCTTTAGTAGAACTTTCTaGTCCTCTCTGGCGAGGATC | + |
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Preference number: 4 (lower is better) Translates to: WSTRGRPLSKRGRWKFVGFSRTF*SSLARI Trigger: GATCCTCGCCAGAGAGGAGCAGAAAGTTCTACTAAA...GCCCACAAACTTCCATCTTCCTCTTTTGGAGAGAGGTCTTCCTCTTGTAGACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR GCA 90 bp | TCTGTAAATCTGAGGCCAGCCTGGTCTACAAGAGGAAGACCTCTCTCCAAAAGACTCCAGGTCCCAGGATaGAATTTAGGAATTCATCAG | + |
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Preference number: 4 (lower is better) Translates to: SVNLRPAWSTRGRPLSKRLQVPG*NLGIHQ Trigger: CTGATGAATTCCTAAATTGCATCCTGGGACCTGGAG...TCTTTTGGAGAGAGGTCTTCCTCTTGTAGACCAGGCTGGCCTCAGATTTACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR CCA 90 bp | AGGAAGACCTCTCTCCAAAAGAGGAAGATGGAAGTTTGTGGGCTAAACCTTGATGATGCAGCGTGGTTGTaGAGGGTTCTGGAAAACACT | + |
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Preference number: 4 (lower is better) Translates to: RKTSLQKRKMEVCGLNLDDAAWL*RVLENT Trigger: AGTGTTTTCCAGAACCCTCCACAACCACGCTGCATC...ATCAAGGTTTAGCCCACAAACTTCCATCTTCCTCTTTTGGAGAGAGGTCTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR TCA 90 bp | AGGTCACAAAGTCTTAGAAAAGGAGGTGGTGCTCACACCTTTAATCCTAGCACTTTCTTCCTGCTTTCTTaGGCTGACTGTTTGTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: RSQSLRKGGGAHTFNPSTFFLLS*ADCLFR Trigger: CCGGAACAAACAGTCAGCTCAAGAAAGCAGGAAGAA...AGTGCTAGGATTAAAGGTGTGAGCACCACCTCCTTTTCTAAGACTTTGTGACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR CCA 90 bp | GAGGTGGTGCTCACACCTTTAATCCTAGCACTTGAGACACAGAAGCAGGTAGAGCAGGTTGTCCAACATTaGAATTTCCAGAAAATTTCC | + |
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Preference number: 4 (lower is better) Translates to: EVVLTPLILALETQKQVEQVVQH*NFQKIS Trigger: GGAAATTTTCTGGAAATTCCAATGTTGGACAACCTG...CTCTACCTGCTTCTGTGTCTCAAGTGCTAGGATTAAAGGTGTGAGCACCACCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS TCA 90 bp | GGGTACCAACGTCGGGCCAAGGTCCTGGGACCTCAGATCCTGGGGTaGCATCGGGAGCCACGCGGGATGCAGCGTGGTTGTGGAGGGTTC | + |
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Preference number: 5 (lower is better) Translates to: GYQRRAKVLGPQILG*HREPRGMQRGCGGF Trigger: GAACCCTCCACAACCACGCTGCATCCCGCGTGGCTCCCGATGTCACCCCAGGATCTGAGGTCCCAGGACCTTGGCCCGACGTTGGTACCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS TCA 90 bp | CCCTGGTATCTCCAGCCCAACCCGGCCTGGACTGAGCAGTGGTTCTaGAGCCACCCAGTCCAGCAGGGTGGCCCGTCCCAGGTCCTCTGT | + |
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Preference number: 5 (lower is better) Translates to: PWYLQPNPAWTEQWF*SHPVQQGGPSQVLC Trigger: ACAGAGGACCTGGGACGGGCCACCCTGCTGGACTGGGTGGCTTCAGAACCACTGCTCAGTCCAGGCCGGGTTGGGCTGGAGATACCAGGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS GCA 90 bp | CAGTGCCCACTCCCAGGTCCCAGCAGCTGGGAGGCAGCCAAGGAATaGTGTTGCAAGTCCCCGCTGCCACCGGACAGCAGCAGTTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: QCPLPGPSSWEAAKE*CCKSPLPPDSSSSF Trigger: GAAGGAACTGCTGCTGTCCGGTGGCAGCGGGGACTTGCAACAGCATTCCTTGGCTGCCTCCCAGCTGCTGGGACCTGGGAGTGGGCACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS GCA 90 bp | AGCGGGAGGGCGAGCCAGCCGGCTCCTCCGGGTACAGGGTATCTGTaGTCCACATGTCCAGGTCAATGGCCACTGAGGACTCCTGGACTT | + |
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Preference number: 5 (lower is better) Translates to: SGRASQPAPPGTGYL*STCPGQWPLRTPGL Trigger: AAGTCCAGGAGTCCTCAGTGGCCATTGACCTGGACATGTGGAGCACAGATACCCTGTACCCGGAGGAGCCGGCTGGCTCGCCCTCCCGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS GCA 90 bp | CCACTCCCAGGTCCCAGCAGCTGGGAGGCAGCCAAGGAATGCTGTTaGAAGTCCCCGCTGCCACCGGACAGCAGCAGTTCCTTCACAGTG | + |
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Preference number: 5 (lower is better) Translates to: PLPGPSSWEAAKECC*KSPLPPDSSSSFTV Trigger: CACTGTGAAGGAACTGCTGCTGTCCGGTGGCAGCGGGGACTTGCAACAGCATTCCTTGGCTGCCTCCCAGCTGCTGGGACCTGGGAGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS GCA 90 bp | TCCTGGGACCTCAGATCCTGGGGTGACATCGGGAGCCACGCGGGATaGAGCGTGGTTGTGGAGGGTTCTGGAAAACACTCGCACTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SWDLRSWGDIGSHAG*SVVVEGSGKHSHWH Trigger: GTGCCAGTGCGAGTGTTTTCCAGAACCCTCCACAACCACGCTGCATCCCGCGTGGCTCCCGATGTCACCCCAGGATCTGAGGTCCCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS CCA 90 bp | GATCCTGGGGTGACATCGGGAGCCACGCGGGATGCAGCGTGGTTGTaGAGGGTTCTGGAAAACACTCGCACTGGCACGAAGTCTCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: DPGVTSGATRDAAWL*RVLENTRTGTKSPG Trigger: CCCTGGAGACTTCGTGCCAGTGCGAGTGTTTTCCAGAACCCTCCACAACCACGCTGCATCCCGCGTGGCTCCCGATGTCACCCCAGGATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS CCA 90 bp | CCACCCAGTCCAGCAGGGTGGCCCGTCCCAGGTCCTCTGTGGAGTTaGCCAGCACCAGGGTGGAGTTGTCTAGCTCTTCTGTCAGGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: PPSPAGWPVPGPLWS*PAPGWSCLALLSGC Trigger: ACAACCTGACAGAAGAGCTAGACAACTCCACCCTGGTGCTGGCCAACTCCACAGAGGACCTGGGACGGGCCACCCTGCTGGACTGGGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS CCA 90 bp | CTGAAGCCACCCAGTCCAGCAGGGTGGCCCGTCCCAGGTCCTCTGTaGAGTTGGCCAGCACCAGGGTGGAGTTGTCTAGCTCTTCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LKPPSPAGWPVPGPL*SWPAPGWSCLALLS Trigger: TGACAGAAGAGCTAGACAACTCCACCCTGGTGCTGGCCAACTCCACAGAGGACCTGGGACGGGCCACCCTGCTGGACTGGGTGGCTTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS GCA 90 bp | AGGATCCAGCCCTCGGCCAGCTCCACGTTTCTCAGGATGCCGTCCTaGCGATCAAACAGGAGGTCAAGGACCTCCATGCTGTCCAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RIQPSASSTFLRMPS*RSNRRSRTSMLSKG Trigger: GCCCTTGGACAGCATGGAGGTCCTTGACCTCCTGTTTGATCGGCAGGACGGCATCCTGAGAAACGTGGAGCTGGCCGAGGGCTGGATCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS GCA 90 bp | CTCTGGCGAGGATCCAGCCCTCGGCCAGCTCCACGTTTCTCAGGATaGCGTCCTGCCGATCAAACAGGAGGTCAAGGACCTCCATGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LWRGSSPRPAPRFSG*RPADQTGGQGPPCC Trigger: ACAGCATGGAGGTCCTTGACCTCCTGTTTGATCGGCAGGACGGCATCCTGAGAAACGTGGAGCTGGCCGAGGGCTGGATCCTCGCCAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS CCA 90 bp | ACCTCAGATCCTGGGGTGACATCGGGAGCCACGCGGGATGCAGCGTaGTTGTGGAGGGTTCTGGAAAACACTCGCACTGGCACGAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TSDPGVTSGATRDAA*LWRVLENTRTGTKS Trigger: AGACTTCGTGCCAGTGCGAGTGTTTTCCAGAACCCTCCACAACCACGCTGCATCCCGCGTGGCTCCCGATGTCACCCCAGGATCTGAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS TCA 90 bp | CGGGTACAGGGTATCTGTGCTCCACATGTCCAGGTCAATGGCCACTaGGGACTCCTGGACTTGTGTCCTTGGAGGCTCAGGGCATGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RVQGICAPHVQVNGH*GLLDLCPWRLRAWG Trigger: ACCCCATGCCCTGAGCCTCCAAGGACACAAGTCCAGGAGTCCTCAGTGGCCATTGACCTGGACATGTGGAGCACAGATACCCTGTACCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS CCA 90 bp | GTATCTGTGCTCCACATGTCCAGGTCAATGGCCACTGAGGACTCCTaGACTTGTGTCCTTGGAGGCTCAGGGCATGGGGTGCTGGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VSVLHMSRSMATEDS*TCVLGGSGHGVLGR Trigger: TCTGCCCAGCACCCCATGCCCTGAGCCTCCAAGGACACAAGTCCAGGAGTCCTCAGTGGCCATTGACCTGGACATGTGGAGCACAGATAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR CAA 90 bp | GCCAGCCTGGTCTACAAGAGGAAGACCTCTCTCCAAAAGAGGAAGATGGAAGTTTCCTTCACAGTGAGGTaGAAGCGGGAGGGCGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ASLVYKRKTSLQKRKMEVSFTVR*KREGEP Trigger: TGGCTCGCCCTCCCGCTTCAACCTCACTGTGAAGGA...AACTTCCATCTTCCTCTTTTGGAGAGAGGTCTTCCTCTTGTAGACCAGGCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR CAA 90 bp | AGCTCTGTAAATCTGAGGCCAGCCTGGTCTACAAGAGGAAGACCTCTCTCCAAAGGGCTGGCTTGCTGGTaGACTGGACCACAAGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSVNLRPAWSTRGRPLSKGLACW*TGPQVP Trigger: AGGCACTTGTGGTCCAGTCAACCAGCAAGCCAGCCC...TTTGGAGAGAGGTCTTCCTCTTGTAGACCAGGCTGGCCTCAGATTTACAGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR CAA 90 bp | TTAGAAAAGGAGGTGGTGCTCACACCTTTAATCCTAGCACTTGAGACACAGAAGGCAGGGCCCCTTGCCTaGCTCCCTGGTGTGACACCT | + |
|
Preference number: 5 (lower is better) Translates to: LEKEVVLTPLILALETQKAGPLA*LPGVTP Trigger: AGGTGTCACACCAGGGAGCAAGGCAAGGGGCCCTGC...CTTCTGTGTCTCAAGTGCTAGGATTAAAGGTGTGAGCACCACCTCCTTTTCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS GCA 90 bp | GTGCCTGCATGGGCTGGCTTGCTGGTTGACTGGACCACAAGTGCCTaGAGGTGTTTCAGCTGCTCCAGAAGAGACAAATTTTGCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VPAWAGLLVDWTTSA*RCFSCSRRDKFCFS Trigger: AGAAAAGCAAAATTTGTCTCTTCTGGAGCAGCTGAAACACCTGCAGGCACTTGTGGTCCAGTCAACCAGCAAGCCAGCCCATGCAGGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR CAA 90 bp | AGGAAGACCTCTCTCCAAAAGAGGAAGATGGAAGTTTGTGGGCTAAACCTTGATCCTGGACTTGTGTCCTaGGAGGCTCAGGGCATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RKTSLQKRKMEVCGLNLDPGLVS*EAQGMG Trigger: CCCCATGCCCTGAGCCTCCAAGGACACAAGTCCAGG...ATCAAGGTTTAGCCCACAAACTTCCATCTTCCTCTTTTGGAGAGAGGTCTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR CAA 90 bp | GCCAGCCTGGTCTACAAGAGGAAGACCTCTCTCCAAAAGAGGAAGATGGAAGTTACTCGTTCCTCATACTaGGTGAGAGGCAGCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ASLVYKRKTSLQKRKMEVTRSSY*VRGSWV Trigger: CACCCAGCTGCCTCTCACCAAGTATGAGGAACGAGT...AACTTCCATCTTCCTCTTTTGGAGAGAGGTCTTCCTCTTGTAGACCAGGCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR CAA 90 bp | TCTGTAAATCTGAGGCCAGCCTGGTCTACAAGAGGAAGACCTCTCTCCAAAAGACGGGATGCAGCGTGGTaGTGGAGGGTTCTGGAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SVNLRPAWSTRGRPLSKRRDAAW*WRVLEN Trigger: GTTTTCCAGAACCCTCCACAACCACGCTGCATCCCG...TCTTTTGGAGAGAGGTCTTCCTCTTGTAGACCAGGCTGGCCTCAGATTTACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR CAA 90 bp | AGCTCTGTAAATCTGAGGCCAGCCTGGTCTACAAGAGGAAGACCTCTCTCCAAAAGCACCAGGGTGGAGTaGTCTAGCTCTTCTGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSVNLRPAWSTRGRPLSKSTRVE*SSSSVR Trigger: CCTGACAGAAGAGCTAGACAACTCCACCCTGGTGCT...TTTGGAGAGAGGTCTTCCTCTTGTAGACCAGGCTGGCCTCAGATTTACAGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR CAA 90 bp | AAAGTCTTAGAAAAGGAGGTGGTGCTCACACCTTTAATCCTAGCACTTGAGACAAGGTCCTCTGTGGAGTaGGCCAGCACCAGGGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KVLEKEVVLTPLILALETRSSVE*ASTRVE Trigger: CTCCACCCTGGTGCTGGCCAACTCCACAGAGGACCT...TGTCTCAAGTGCTAGGATTAAAGGTGTGAGCACCACCTCCTTTTCTAAGACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR CAA 90 bp | AGCTCTGTAAATCTGAGGCCAGCCTGGTCTACAAGAGGAAGACCTCTCTCCAAAGGGCTGTCAACTTTGTaGGAGTTGAAAGGGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SSVNLRPAWSTRGRPLSKGLSTL*ELKGLM Trigger: CATCAGCCCTTTCAACTCCAACAAAGTTGACAGCCC...TTTGGAGAGAGGTCTTCCTCTTGTAGACCAGGCTGGCCTCAGATTTACAGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR CAA 90 bp | GAGGTGGTGCTCACACCTTTAATCCTAGCACTTGAGACACAGAAGCAGGTAGAGAGCTCTTCTGTCAGGTaGTCCAACATTGGAATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EVVLTPLILALETQKQVESSSVR*SNIGIS Trigger: GGAAATTCCAATGTTGGACAACCTGACAGAAGAGCT...CTCTACCTGCTTCTGTGTCTCAAGTGCTAGGATTAAAGGTGTGAGCACCACCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS GCA 90 bp | ATGCAATTTAGGAATTCATCAGAATCAGAATTTAGTAGAACTTTCTaGTCCTCTCTGGCGAGGATCCAGCCCTCGGCCAGCTCCACGTTT | + |
|
Preference number: 5 (lower is better) Translates to: MQFRNSSESEFSRTF*SSLARIQPSASSTF Trigger: AAACGTGGAGCTGGCCGAGGGCTGGATCCTCGCCAGAGAGGAGCAGAAAGTTCTACTAAATTCTGATTCTGATGAATTCCTAAATTGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR CAA 90 bp | AAAGTCTTAGAAAAGGAGGTGGTGCTCACACCTTTAATCCTAGCACTTGAGACATCAACTTTGTTGGAGTaGAAAGGGCTGATGGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: KVLEKEVVLTPLILALETSTLLE*KGLMEG Trigger: CCCCTCCATCAGCCCTTTCAACTCCAACAAAGTTGA...TGTCTCAAGTGCTAGGATTAAAGGTGTGAGCACCACCTCCTTTTCTAAGACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS-3UTR CAA 90 bp | ACCTCTCTCCAAAAGAGGAAGATGGAAGTTTGTGGGCTAAACCTTGATTTGGGATCAGGTTGTCCAACATaGGAATTTCCAGAAAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: TSLQKRKMEVCGLNLDLGSGCPT*EFPENF Trigger: GAAATTTTCTGGAAATTCCAATGTTGGACAACCTGA...TCCCAAATCAAGGTTTAGCCCACAAACTTCCATCTTCCTCTTTTGGAGAGAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS CAA 72 bp | CTGCCACCGGACAGCAGCAGTTCCTTCACAGTGAGGTaGAAGCGGGAGGGCGAGCCAGCCGGCTCCTCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: LPPDSSSSFTVR*KREGEPAGSSG Trigger: CCCGGAGGAGCCGGCTGGCTCGCCCTCCCGCTTCAACCTCACTGTGAAGGAACTGCTGCTGTCCGGTGGCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS TCA 72 bp | CGTCGGGCCAAGGTCCTGGGACCTCAGATCCTGGGGTaGCATCGGGAGCCACGCGGGATGCAGCGTGGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: RRAKVLGPQILG*HREPRGMQRGC Trigger: ACAACCACGCTGCATCCCGCGTGGCTCCCGATGTCACCCCAGGATCTGAGGTCCCAGGACCTTGGCCCGACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS CCA 72 bp | ACCAACGTCGGGCCAAGGTCCTGGGACCTCAGATCCTaGGGTGACATCGGGAGCCACGCGGGATGCAGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: TNVGPRSWDLRS*GDIGSHAGCSV Trigger: CACGCTGCATCCCGCGTGGCTCCCGATGTCACCCCAGGATCTGAGGTCCCAGGACCTTGGCCCGACGTTGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS CAA 90 bp | AAGTCCCCGCTGCCACCGGACAGCAGCAGTTCCTTCACAGTGAGGTaGAAGCGGGAGGGCGAGCCAGCCGGCTCCTCCGGGTACAGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: KSPLPPDSSSSFTVR*KREGEPAGSSGYRV Trigger: TACCCTGTACCCGGAGGAGCCGGCTGGCTCGCCCTCCCGCTTCAACCTCACTGTGAAGGAACTGCTGCTGTCCGGTGGCAGCGGGGACTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS GCA 72 bp | GGTCCCAGCAGCTGGGAGGCAGCCAAGGAATGCTGTTaGAAGTCCCCGCTGCCACCGGACAGCAGCAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GPSSWEAAKECC*KSPLPPDSSSS Trigger: GGAACTGCTGCTGTCCGGTGGCAGCGGGGACTTGCAACAGCATTCCTTGGCTGCCTCCCAGCTGCTGGGACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS CCA 72 bp | CAGTCTGCACTGAGACCACCGGAGGAAGGGCCTTTGTaGGGGGTACCAACGTCGGGCCAAGGTCCTGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: QSALRPPEEGPL*GVPTSGQGPGT Trigger: GGTCCCAGGACCTTGGCCCGACGTTGGTACCCCCCACAAAGGCCCTTCCTCCGGTGGTCTCAGTGCAGACTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS CCA 72 bp | CCCAGTCCAGCAGGGTGGCCCGTCCCAGGTCCTCTGTaGAGTTGGCCAGCACCAGGGTGGAGTTGTCTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PSPAGWPVPGPL*SWPAPGWSCLA Trigger: AGCTAGACAACTCCACCCTGGTGCTGGCCAACTCCACAGAGGACCTGGGACGGGCCACCCTGCTGGACTGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS CCA 72 bp | GGCAGGGCCCCTTGCCTTGCTCCCTGGTGTGACACCTaGCTACCGTGTTGGCTGGTTCAGTGCCACTACGAG | + |
|
Preference number: 6 (lower is better) Translates to: GRAPCLAPWCDT*LPCWLVQCHYE Trigger: CTCGTAGTGGCACTGAACCAGCCAACACGGTAGCCAGGTGTCACACCAGGGAGCAAGGCAAGGGGCCCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS CCA 72 bp | CCTGGGGTGACATCGGGAGCCACGCGGGATGCAGCGTaGTTGTGGAGGGTTCTGGAAAACACTCGCACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PGVTSGATRDAA*LWRVLENTRTG Trigger: GCCAGTGCGAGTGTTTTCCAGAACCCTCCACAACCACGCTGCATCCCGCGTGGCTCCCGATGTCACCCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS CCA 72 bp | CCAGCAGGGTGGCCCGTCCCAGGTCCTCTGTGGAGTTaGCCAGCACCAGGGTGGAGTTGTCTAGCTCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PAGWPVPGPLWS*PAPGWSCLALL Trigger: CAGAAGAGCTAGACAACTCCACCCTGGTGCTGGCCAACTCCACAGAGGACCTGGGACGGGCCACCCTGCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS CAA 72 bp | AGGTCCCAGCAGCTGGGAGGCAGCCAAGGAATGCTGTaGCAAGTCCCCGCTGCCACCGGACAGCAGCAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: RSQQLGGSQGML*QVPAATGQQQF Trigger: GAACTGCTGCTGTCCGGTGGCAGCGGGGACTTGCAACAGCATTCCTTGGCTGCCTCCCAGCTGCTGGGACCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS CAA 72 bp | GGGGTGACATCGGGAGCCACGCGGGATGCAGCGTGGTaGTGGAGGGTTCTGGAAAACACTCGCACTGGCACG | + |
|
Preference number: 6 (lower is better) Translates to: GVTSGATRDAAW*WRVLENTRTGT Trigger: CGTGCCAGTGCGAGTGTTTTCCAGAACCCTCCACAACCACGCTGCATCCCGCGTGGCTCCCGATGTCACCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS CAA 90 bp | GCCACCCAGTCCAGCAGGGTGGCCCGTCCCAGGTCCTCTGTGGAGTaGGCCAGCACCAGGGTGGAGTTGTCTAGCTCTTCTGTCAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: ATQSSRVARPRSSVE*ASTRVELSSSSVRL Trigger: CAACCTGACAGAAGAGCTAGACAACTCCACCCTGGTGCTGGCCAACTCCACAGAGGACCTGGGACGGGCCACCCTGCTGGACTGGGTGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS GCA 72 bp | GCGAGCCAGCCGGCTCCTCCGGGTACAGGGTATCTGTaGTCCACATGTCCAGGTCAATGGCCACTGAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: ASQPAPPGTGYL*STCPGQWPLRT Trigger: AGTCCTCAGTGGCCATTGACCTGGACATGTGGAGCACAGATACCCTGTACCCGGAGGAGCCGGCTGGCTCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS CCA 72 bp | GAGCCACGCGGGATGCAGCGTGGTTGTGGAGGGTTCTaGAAAACACTCGCACTGGCACGAAGTCTCCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: EPRGMQRGCGGF*KTLALARSLQG Trigger: GCCCTGGAGACTTCGTGCCAGTGCGAGTGTTTTCCAGAACCCTCCACAACCACGCTGCATCCCGCGTGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS CAA 72 bp | TCCAGCAGGGTGGCCCGTCCCAGGTCCTCTGTGGAGTaGGCCAGCACCAGGGTGGAGTTGTCTAGCTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSRVARPRSSVE*ASTRVELSSSS Trigger: AGAAGAGCTAGACAACTCCACCCTGGTGCTGGCCAACTCCACAGAGGACCTGGGACGGGCCACCCTGCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS GCA 72 bp | CCCTCGGCCAGCTCCACGTTTCTCAGGATGCCGTCCTaGCGATCAAACAGGAGGTCAAGGACCTCCATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PSASSTFLRMPS*RSNRRSRTSML Trigger: CAGCATGGAGGTCCTTGACCTCCTGTTTGATCGGCAGGACGGCATCCTGAGAAACGTGGAGCTGGCCGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS GCA 72 bp | GGATCCAGCCCTCGGCCAGCTCCACGTTTCTCAGGATaGCGTCCTGCCGATCAAACAGGAGGTCAAGGACCT | + |
|
Preference number: 6 (lower is better) Translates to: GSSPRPAPRFSG*RPADQTGGQGP Trigger: AGGTCCTTGACCTCCTGTTTGATCGGCAGGACGGCATCCTGAGAAACGTGGAGCTGGCCGAGGGCTGGATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS GCA 72 bp | TCAGGGCGAAGGACAGCAGAAGGACCGCTATGCAGGTaGCTGCATGGGCTGGCTTGCTGGTTGACTGGACCA | + |
|
Preference number: 6 (lower is better) Translates to: SGRRTAEGPLCR*LHGLACWLTGP Trigger: TGGTCCAGTCAACCAGCAAGCCAGCCCATGCAGGCACCTGCATAGCGGTCCTTCTGCTGTCCTTCGCCCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
||
| CDS GCA 72 bp | CTCAGATCCTGGGGTGACATCGGGAGCCACGCGGGATaGAGCGTGGTTGTGGAGGGTTCTGGAAAACACTCG | + |
|
Preference number: 6 (lower is better) Translates to: LRSWGDIGSHAG*SVVVEGSGKHS Trigger: CGAGTGTTTTCCAGAACCCTCCACAACCACGCTGCATCCCGCGTGGCTCCCGATGTCACCCCAGGATCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS CCA 72 bp | GTGACATCGGGAGCCACGCGGGATGCAGCGTGGTTGTaGAGGGTTCTGGAAAACACTCGCACTGGCACGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VTSGATRDAAWL*RVLENTRTGTK Trigger: CTTCGTGCCAGTGCGAGTGTTTTCCAGAACCCTCCACAACCACGCTGCATCCCGCGTGGCTCCCGATGTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
||
| CDS CAA 90 bp | TCAGATCCTGGGGTGACATCGGGAGCCACGCGGGATGCAGCGTGGTaGTGGAGGGTTCTGGAAAACACTCGCACTGGCACGAAGTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SDPGVTSGATRDAAW*WRVLENTRTGTKSP Trigger: TGGAGACTTCGTGCCAGTGCGAGTGTTTTCCAGAACCCTCCACAACCACGCTGCATCCCGCGTGGCTCCCGATGTCACCCCAGGATCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
||
| CDS TCA 72 bp | CGCTATGCAGGTGCCTGCATGGGCTGGCTTGCTGGTTaGCTGGACCACAAGTGCCTGCAGGTGTTTCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RYAGACMGWLAG*LDHKCLQVFQL Trigger: CAGCTGAAACACCTGCAGGCACTTGTGGTCCAGTCAACCAGCAAGCCAGCCCATGCAGGCACCTGCATAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
||
| CDS CCA 72 bp | GGACCGCTATGCAGGTGCCTGCATGGGCTGGCTTGCTaGTTGACTGGACCACAAGTGCCTGCAGGTGTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: GPLCRCLHGLAC*LTGPQVPAGVS Trigger: TGAAACACCTGCAGGCACTTGTGGTCCAGTCAACCAGCAAGCCAGCCCATGCAGGCACCTGCATAGCGGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
||
| CDS CCA 72 bp | AAGGACAGCAGAAGGACCGCTATGCAGGTGCCTGCATaGGCTGGCTTGCTGGTTGACTGGACCACAAGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: KDSRRTAMQVPA*AGLLVDWTTSA Trigger: GGCACTTGTGGTCCAGTCAACCAGCAAGCCAGCCCATGCAGGCACCTGCATAGCGGTCCTTCTGCTGTCCTT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
||
| CDS CAA 72 bp | AGAAGGACCGCTATGCAGGTGCCTGCATGGGCTGGCTaGCTGGTTGACTGGACCACAAGTGCCTGCAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: RRTAMQVPAWAG*LVDWTTSACRC Trigger: ACACCTGCAGGCACTTGTGGTCCAGTCAACCAGCAAGCCAGCCCATGCAGGCACCTGCATAGCGGTCCTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS CAA 90 bp | ACTCGCACTGGCACGAAGTCTCCAGGGCTGTCAACTTTGTTGGAGTaGAAAGGGCTGATGGAGGGGAGGATGATCAGGGCGAAGGACAGC | + |
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Preference number: 6 (lower is better) Translates to: TRTGTKSPGLSTLLE*KGLMEGRMIRAKDS Trigger: GCTGTCCTTCGCCCTGATCATCCTCCCCTCCATCAGCCCTTTCAACTCCAACAAAGTTGACAGCCCTGGAGACTTCGTGCCAGTGCGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS CCA 72 bp | CAATGCATCTTGCACCAGACGGACCCTAAGCCACCTTaGTACCCAGGACAGCCACATCTCCCCTGGTATCTC | + |
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Preference number: 6 (lower is better) Translates to: QCILHQTDPKPP*YPGQPHLPWYL Trigger: GAGATACCAGGGGAGATGTGGCTGTCCTGGGTACCAAGGTGGCTTAGGGTCCGTCTGGTGCAAGATGCATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS CAA 72 bp | GGCACGAAGTCTCCAGGGCTGTCAACTTTGTTGGAGTaGAAAGGGCTGATGGAGGGGAGGATGATCAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: GTKSPGLSTLLE*KGLMEGRMIRA Trigger: CGCCCTGATCATCCTCCCCTCCATCAGCCCTTTCAACTCCAACAAAGTTGACAGCCCTGGAGACTTCGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS CCA 72 bp | GGTACAGGGTATCTGTGCTCCACATGTCCAGGTCAATaGCCACTGAGGACTCCTGGACTTGTGTCCTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: GTGYLCSTCPGQ*PLRTPGLVSLE Trigger: CTCCAAGGACACAAGTCCAGGAGTCCTCAGTGGCCATTGACCTGGACATGTGGAGCACAGATACCCTGTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS CCA 72 bp | AGCGTGGTTGTGGAGGGTTCTGGAAAACACTCGCACTaGCACGAAGTCTCCAGGGCTGTCAACTTTGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: SVVVEGSGKHSH*HEVSRAVNFVG Trigger: TCCAACAAAGTTGACAGCCCTGGAGACTTCGTGCCAGTGCGAGTGTTTTCCAGAACCCTCCACAACCACGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS GCA 72 bp | GTCCAACATTGGAATTTCCAGAAAATTTCCCCAGTCTaGACTGAGACCACCGGAGGAAGGGCCTTTGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: VQHWNFQKISPV*TETTGGRAFVG Trigger: CCCCACAAAGGCCCTTCCTCCGGTGGTCTCAGTGCAGACTGGGGAAATTTTCTGGAAATTCCAATGTTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS CCA 72 bp | TCTAAATGCAAAACCTTCCTCTGCAGCTCCTGGTTCTaGGCAGTACACGCTGACATCCGGTTCTCCAGACCA | + |
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Preference number: 6 (lower is better) Translates to: SKCKTFLCSSWF*AVHADIRFSRP Trigger: TGGTCTGGAGAACCGGATGTCAGCGTGTACTGCCCAGAACCAGGAGCTGCAGAGGAAGGTTTTGCATTTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS TCA 72 bp | CTTCCTCTGCAGCTCCTGGTTCTGGGCAGTACACGCTaGCATCCGGTTCTCCAGACCATCAATGTATTCTTT | + |
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Preference number: 6 (lower is better) Translates to: LPLQLLVLGSTR*HPVLQTINVFF Trigger: AAAGAATACATTGATGGTCTGGAGAACCGGATGTCAGCGTGTACTGCCCAGAACCAGGAGCTGCAGAGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS GCA 72 bp | AGGAATTCATCAGAATCAGAATTTAGTAGAACTTTCTaGTCCTCTCTGGCGAGGATCCAGCCCTCGGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: RNSSESEFSRTF*SSLARIQPSAS Trigger: GCTGGCCGAGGGCTGGATCCTCGCCAGAGAGGAGCAGAAAGTTCTACTAAATTCTGATTCTGATGAATTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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| CDS CAA 72 bp | AGCACCAGGGTGGAGTTGTCTAGCTCTTCTGTCAGGTaGTCCAACATTGGAATTTCCAGAAAATTTCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: STRVELSSSSVR*SNIGISRKFPQ Trigger: CTGGGGAAATTTTCTGGAAATTCCAATGTTGGACAACCTGACAGAAGAGCTAGACAACTCCACCCTGGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117422.2 |
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