Pregenerated sensors for CREB3L2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038648Ensembl transcript IDs: ENSMUST00000041093.6
Found 225 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | AACAGGAGGGCTGCCAAGATCACAGTGGCCCTGAGCTTGGCCATCTaGCAGCTGGGAATCCACCACGGTAGGGAGGGAGGAGTGGGGGAA | + |
Preference number: 1 (lower is better) Translates to: NRRAAKITVALSLAI*QLGIHHGREGGVGE Trigger: TTCCCCCACTCCTCCCTCCCTACCGTGGTGGATTCCCAGCTGGCAGATGGCCAAGCTCAGGGCCACTGTGATCTTGGCAGCCCTCCTGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR GCA 90 bp | ACACCACCCTGTAAGGGAGGGTGGCAGCCCCTTAAACAGGAGGGCTaGCAAGATCACAGTGGCCCTGAGCTTGGCCATCTGCCAGCTGGG | + |
Preference number: 1 (lower is better) Translates to: TPPCKGGWQPLKQEG*QDHSGPELGHLPAG Trigger: CCCAGCTGGCAGATGGCCAAGCTCAGGGCCACTGTGATCTTGGCAGCCCTCCTGTTTAAGGGGCTGCCACCCTCCCTTACAGGGTGGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR GCA 90 bp | CTAGGCAAGGAGAGTTCACTGATGCCTGTGGCCCCTCCTGGGCTCTaGTCTGCACTGTGTAGGGAGGGTCACCCACAGGGTGCACTGAGT | + |
Preference number: 1 (lower is better) Translates to: LGKESSLMPVAPPGL*SALCREGHPQGALS Trigger: ACTCAGTGCACCCTGTGGGTGACCCTCCCTACACAGTGCAGAGCAGAGCCCAGGAGGGGCCACAGGCATCAGTGAACTCTCCTTGCCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CCA 90 bp | CACCCACAGGGTGCACTGAGTGTGGGTGTTCCCACAGACTCAGCATaGGCTTCATCTGTGCAGCCACGAGTGCACACCCCGCTGTTGAGC | + |
Preference number: 1 (lower is better) Translates to: HPQGALSVGVPTDSA*ASSVQPRVHTPLLS Trigger: GCTCAACAGCGGGGTGTGCACTCGTGGCTGCACAGATGAAGCCCATGCTGAGTCTGTGGGAACACCCACACTCAGTGCACCCTGTGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR TCA 90 bp | GCCAGGGAGACAGAGCTATTGTCCTGTGGAGATGCAGGCTGTGTATaGGTGGGTGTGGGGGTGTCCTACAAACAACACAGTGGGCAGGAG | + |
Preference number: 1 (lower is better) Translates to: ARETELLSCGDAGCV*VGVGVSYKQHSGQE Trigger: CTCCTGCCCACTGTGTTGTTTGTAGGACACCCCCACACCCACTCATACACAGCCTGCATCTCCACAGGACAATAGCTCTGTCTCCCTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR GCA 90 bp | CCTTCCAGTGGCCTCCTTACTGCTCTCTCCACTCTCTCCTGTGACTaGCTTTGTGGGGTGGAAGCAGAATTTATCCTGGCGGCTCTGCTC | + |
Preference number: 1 (lower is better) Translates to: PSSGLLTALSTLSCD*LCGVEAEFILAALL Trigger: GAGCAGAGCCGCCAGGATAAATTCTGCTTCCACCCCACAAAGGCAGTCACAGGAGAGAGTGGAGAGAGCAGTAAGGAGGCCACTGGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CCA 90 bp | GAGCCTGATGCCTTCAGGAATTGCACTTGCGGCCTGAAAATATGGTaGGAGCCCCATCTGCCTCTGCAGACATCCAATCAGGACTCCGGG | + |
Preference number: 1 (lower is better) Translates to: EPDAFRNCTCGLKIW*EPHLPLQTSNQDSG Trigger: CCCGGAGTCCTGATTGGATGTCTGCAGAGGCAGATGGGGCTCCCACCATATTTTCAGGCCGCAAGTGCAATTCCTGAAGGCATCAGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CCA 90 bp | CAGAGCTATTGTCCTGTGGAGATGCAGGCTGTGTATGAGTGGGTGTaGGGGTGTCCTACAAACAACACAGTGGGCAGGAGAGCCTGGGAG | + |
Preference number: 1 (lower is better) Translates to: QSYCPVEMQAVYEWV*GCPTNNTVGRRAWE Trigger: CTCCCAGGCTCTCCTGCCCACTGTGTTGTTTGTAGGACACCCCCACACCCACTCATACACAGCCTGCATCTCCACAGGACAATAGCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CCA 90 bp | CCCTTTTTGTATAGCCCTGGCTATACACCACCCTGTAAGGGAGGGTaGCAGCCCCTTAAACAGGAGGGCTGCCAAGATCACAGTGGCCCT | + |
Preference number: 1 (lower is better) Translates to: PFLYSPGYTPPCKGG*QPLKQEGCQDHSGP Trigger: AGGGCCACTGTGATCTTGGCAGCCCTCCTGTTTAAGGGGCTGCCACCCTCCCTTACAGGGTGGTGTATAGCCAGGGCTATACAAAAAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CCA 90 bp | CACCCCTCGTGTTGGCAAGAATCAGGCAGATGTCCACTCCTCAGGTaGGGACAAGATGTCTCCATTTCTCCATGGGGGCTTGCGCACACA | + |
Preference number: 1 (lower is better) Translates to: HPSCWQESGRCPLLR*GQDVSISPWGLAHT Trigger: TGTGTGCGCAAGCCCCCATGGAGAAATGGAGACATCTTGTCCCCACCTGAGGAGTGGACATCTGCCTGATTCTTGCCAACACGAGGGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR TCA 90 bp | CATCCAATCAGGACTCCGGGGTACAGGGTGGAGAGAAGACTGCAATaGCGCTTTGGTCCTCTCAGTGCAGGGTCACACTGGAGTCCTAGT | + |
Preference number: 1 (lower is better) Translates to: HPIRTPGYRVERRLQ*RFGPLSAGSHWSPS Trigger: ACTAGGACTCCAGTGTGACCCTGCACTGAGAGGACCAAAGCGTCATTGCAGTCTTCTCTCCACCCTGTACCCCGGAGTCCTGATTGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR TCA 90 bp | CTGGGAGAGAAGAGCCTGATGCCTTCAGGAATTGCACTTGCGGCCTaGAAATATGGTGGGAGCCCCATCTGCCTCTGCAGACATCCAATC | + |
Preference number: 1 (lower is better) Translates to: LGEKSLMPSGIALAA*KYGGSPICLCRHPI Trigger: GATTGGATGTCTGCAGAGGCAGATGGGGCTCCCACCATATTTTCAGGCCGCAAGTGCAATTCCTGAAGGCATCAGGCTCTTCTCTCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CCA 90 bp | TCAGAGGAGTCACTCCTCCCGGGGAAGAATCAGGCAGTGTCTTCTTaGCACTATTGGTGGAAACAAGCCTGCTCGTTCCACCCCTATCTC | + |
Preference number: 1 (lower is better) Translates to: SEESLLPGKNQAVSS*HYWWKQACSFHPYL Trigger: GAGATAGGGGTGGAACGAGCAGGCTTGTTTCCACCAATAGTGCCAAGAAGACACTGCCTGATTCTTCCCCGGGAGGAGTGACTCCTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CCA 90 bp | AGAGAGAGCCAAAGAGCTGAGTGCTGCACAGTCAGGCCGCTGCAGTaGGTAGCTCTGTTTCTGCCTAGAGAGGCAAAGACAATCTGTGAG | + |
Preference number: 1 (lower is better) Translates to: RESQRAECCTVRPLQ*VALFLPREAKTICE Trigger: CTCACAGATTGTCTTTGCCTCTCTAGGCAGAAACAGAGCTACCCACTGCAGCGGCCTGACTGTGCAGCACTCAGCTCTTTGGCTCTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR TCA 90 bp | GAAAAAGACAGGATGAGACGGGCATTTCAGAGAGAGCCAAAGAGCTaGGTGCTGCACAGTCAGGCCGCTGCAGTGGGTAGCTCTGTTTCT | + |
Preference number: 1 (lower is better) Translates to: EKDRMRRAFQREPKS*VLHSQAAAVGSSVS Trigger: AGAAACAGAGCTACCCACTGCAGCGGCCTGACTGTGCAGCACTCAGCTCTTTGGCTCTCTCTGAAATGCCCGTCTCATCCTGTCTTTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR TCA 90 bp | TCACCCAGACACAAGGCCTGTGAGCCATGCTCGAAAAAGACAGGATaGGACGGGCATTTCAGAGAGAGCCAAAGAGCTGAGTGCTGCACA | + |
Preference number: 1 (lower is better) Translates to: SPRHKACEPCSKKTG*DGHFRESQRAECCT Trigger: TGTGCAGCACTCAGCTCTTTGGCTCTCTCTGAAATGCCCGTCTCATCCTGTCTTTTTCGAGCATGGCTCACAGGCCTTGTGTCTGGGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR GCA 90 bp | GAAGAAGAAAGCAGTCCGATATCCCTGTTGTATGTGGATAACAGTTaGAGGGGCTCTGGGGGCACCCAAGAGGAGCTGGTGCTTAAGACG | + |
Preference number: 1 (lower is better) Translates to: EEESSPISLLYVDNS*RGSGGTQEELVLKT Trigger: CGTCTTAAGCACCAGCTCCTCTTGGGTGCCCCCAGAGCCCCTGCAACTGTTATCCACATACAACAGGGATATCGGACTGCTTTCTTCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR GCA 90 bp | CCTTTGTGGGGTGGAAGCAGAATTTATCCTGGCGGCTCTGCTCTCTaGCTCTGCAGCAAGTGCTCTAATGAAGTGGTTCTCGCTAAGACC | + |
Preference number: 1 (lower is better) Translates to: PLWGGSRIYPGGSAL*LCSKCSNEVVLAKT Trigger: GGTCTTAGCGAGAACCACTTCATTAGAGCACTTGCTGCAGAGGCAGAGAGCAGAGCCGCCAGGATAAATTCTGCTTCCACCCCACAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CCA 90 bp | TCACTCCTCCCGGGGAAGAATCAGGCAGTGTCTTCTTGGCACTATTaGTGGAAACAAGCCTGCTCGTTCCACCCCTATCTCAGCCCTAAA | + |
Preference number: 1 (lower is better) Translates to: SLLPGKNQAVSSWHY*WKQACSFHPYLSPK Trigger: TTTAGGGCTGAGATAGGGGTGGAACGAGCAGGCTTGTTTCCACCAATAGTGCCAAGAAGACACTGCCTGATTCTTCCCCGGGAGGAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR TCA 90 bp | AGAACTAAGGATGTGACTGGACACTTCCTTCTTCCTCCTCCTGCATaGATGGGGTCTCGACCTCAGCTCTCCAGGGACATCAAGAGACCA | + |
Preference number: 1 (lower is better) Translates to: RTKDVTGHFLLPPPA*MGSRPQLSRDIKRP Trigger: TGGTCTCTTGATGTCCCTGGAGAGCTGAGGTCGAGACCCCATTCATGCAGGAGGAGGAAGAAGGAAGTGTCCAGTCACATCCTTAGTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CCA 90 bp | GGAGTCAGTGCTTTGCCACTCCCTGGCATGTCTGTGGCATGTGTGTaGCTAGAGTCTGGGGTCTCAACTGAACATGAGTCATGTCTTCTT | + |
Preference number: 1 (lower is better) Translates to: GVSALPLPGMSVACV*LESGVSTEHESCLL Trigger: AAGAAGACATGACTCATGTTCAGTTGAGACCCCAGACTCTAGCCACACACATGCCACAGACATGCCAGGGAGTGGCAAAGCACTGACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR GCA 90 bp | TCAGCTCTCCAGGGACATCAAGAGACCAAGGTTCAGCTCAGCCAATaGACACATCAGTCTAAATCCCCATTTCAGCTCTCTATGGCAAAC | + |
Preference number: 1 (lower is better) Translates to: SALQGHQETKVQLSQ*THQSKSPFQLSMAN Trigger: GTTTGCCATAGAGAGCTGAAATGGGGATTTAGACTGATGTGTGCATTGGCTGAGCTGAACCTTGGTCTCTTGATGTCCCTGGAGAGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR GCA 90 bp | AAGAATCAGGCAGTGTCTTCTTGGCACTATTGGTGGAAACAAGCCTaGTCGTTCCACCCCTATCTCAGCCCTAAAATAATTTCCAATGGC | + |
Preference number: 1 (lower is better) Translates to: KNQAVSSWHYWWKQA*SFHPYLSPKIISNG Trigger: GCCATTGGAAATTATTTTAGGGCTGAGATAGGGGTGGAACGAGCAGGCTTGTTTCCACCAATAGTGCCAAGAAGACACTGCCTGATTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CCA 90 bp | TCAGCCAATGCACACATCAGTCTAAATCCCCATTTCAGCTCTCTATaGCAAACCCTTCCTCTCTCATCATGCAAACATTGCCTCACCCTA | + |
Preference number: 1 (lower is better) Translates to: SANAHISLNPHFSSL*QTLPLSSCKHCLTL Trigger: TAGGGTGAGGCAATGTTTGCATGATGAGAGAGGAAGGGTTTGCCATAGAGAGCTGAAATGGGGATTTAGACTGATGTGTGCATTGGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CCA 90 bp | CTCTGGCTTATGTCCCATGTCTCTTGTTACAGATTCTATTCTGGATaGCTAATTTCTCAGAGACAAAGGGCCCTGCTGTCTGGAGACAGT | + |
Preference number: 1 (lower is better) Translates to: LWLMSHVSCYRFYSG*LISQRQRALLSGDS Trigger: ACTGTCTCCAGACAGCAGGGCCCTTTGTCTCTGAGAAATTAGCCATCCAGAATAGAATCTGTAACAAGAGACATGGGACATAAGCCAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR TCA 90 bp | ATTTTTATAGAACACTCTCTTTGCATGAGCTACACTGCAAAGTCCTaGCACTTCAGAGGCTCTTCCTCAATGCTGGCGATGGTGATGGCA | + |
Preference number: 1 (lower is better) Translates to: IFIEHSLCMSYTAKS*HFRGSSSMLAMVMA Trigger: TGCCATCACCATCGCCAGCATTGAGGAAGAGCCTCTGAAGTGTCAGGACTTTGCAGTGTAGCTCATGCAAAGAGAGTGTTCTATAAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR TCA 90 bp | GCTGTAACAAACAGCAGTTACTGTTTTTCTCCTCGTGCAGAAAGCTaGCCTCTTGGCCCAGAGGCACGGAATATTAATTTTCAAATGGGC | + |
Preference number: 1 (lower is better) Translates to: AVTNSSYCFSPRAES*PLGPEARNINFQMG Trigger: GCCCATTTGAAAATTAATATTCCGTGCCTCTGGGCCAAGAGGTCAGCTTTCTGCACGAGGAGAAAAACAGTAACTGCTGTTTGTTACAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR GCA 90 bp | AATCCCCATTTCAGCTCTCTATGGCAAACCCTTCCTCTCTCATCATaGAAACATTGCCTCACCCTAGGATTTTTCCTGCTTAGGCTCTTT | + |
Preference number: 1 (lower is better) Translates to: NPHFSSLWQTLPLSS*KHCLTLGFFLLRLF Trigger: AAAGAGCCTAAGCAGGAAAAATCCTAGGGTGAGGCAATGTTTGCATGATGAGAGAGGAAGGGTTTGCCATAGAGAGCTGAAATGGGGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR GCA 90 bp | ATCCTAGCCTTAAACTCTGAACAAAAAGTGCACACATCCACTAATTaGTCGCAATCCATCTTGTCTCATGCATCTCTGCTGGGTCCCTTG | + |
Preference number: 1 (lower is better) Translates to: ILALNSEQKVHTSTN*SQSILSHASLLGPL Trigger: CAAGGGACCCAGCAGAGATGCATGAGACAAGATGGATTGCGAGCAATTAGTGGATGTGTGCACTTTTTGTTCAGAGTTTAAGGCTAGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CCA 90 bp | AGTTCTCTGGCTTATGTCCCATGTCTCTTGTTACAGATTCTATTCTaGATGGCTAATTTCTCAGAGACAAAGGGCCCTGCTGTCTGGAGA | + |
Preference number: 1 (lower is better) Translates to: SSLAYVPCLLLQILF*MANFSETKGPAVWR Trigger: TCTCCAGACAGCAGGGCCCTTTGTCTCTGAGAAATTAGCCATCCAGAATAGAATCTGTAACAAGAGACATGGGACATAAGCCAGAGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR TCA 90 bp | TCATGGGGCATGACAGCAAACACTAATGACACCAAATCCTATGTGTaGCATAGAAGGCAGGGCCATAATCCCCTTTATACAGGCTCTAAT | + |
Preference number: 1 (lower is better) Translates to: SWGMTANTNDTKSYV*HRRQGHNPLYTGSN Trigger: ATTAGAGCCTGTATAAAGGGGATTATGGCCCTGCCTTCTATGTCACACATAGGATTTGGTGTCATTAGTGTTTGCTGTCATGCCCCATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR GCA 90 bp | AGCTGTCAAGATTTTTATAGAACACTCTCTTTGCATGAGCTACACTaGAAAGTCCTGACACTTCAGAGGCTCTTCCTCAATGCTGGCGAT | + |
Preference number: 1 (lower is better) Translates to: SCQDFYRTLSLHELH*KVLTLQRLFLNAGD Trigger: ATCGCCAGCATTGAGGAAGAGCCTCTGAAGTGTCAGGACTTTGCAGTGTAGCTCATGCAAAGAGAGTGTTCTATAAAAATCTTGACAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR TCA 90 bp | ACACGAAGTGCTGCAAAGAATTTTAACAAGACCTGTAGTGAAAAATaGTGGACACAGATTCTGTACCAGCCGGAAGAAGAAAGCAGTCCG | + |
Preference number: 1 (lower is better) Translates to: TRSAAKNFNKTCSEK*WTQILYQPEEESSP Trigger: CGGACTGCTTTCTTCTTCCGGCTGGTACAGAATCTGTGTCCATCATTTTTCACTACAGGTCTTGTTAAAATTCTTTGCAGCACTTCGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR TCA 90 bp | AATGTGGCCCCAAATCTGTCTTCCCAAGGCATGGAATCATTTCTATaGACCGAATGGTTATCTAATTTTGCCTGCACTCATGTTAGATCC | + |
Preference number: 1 (lower is better) Translates to: NVAPNLSSQGMESFL*TEWLSNFACTHVRS Trigger: GGATCTAACATGAGTGCAGGCAAAATTAGATAACCATTCGGTTCATAGAAATGATTCCATGCCTTGGGAAGACAGATTTGGGGCCACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR GCA 90 bp | CCATACCTTCCGTGGCCTTTACTTCTCCTAACAATGAGTCACCCTTaGTTTGCATTTCAATCAGGTTCAAAGACTCAAAGCTTACTTACA | + |
Preference number: 1 (lower is better) Translates to: PYLPWPLLLLTMSHP*FAFQSGSKTQSLLT Trigger: TGTAAGTAAGCTTTGAGTCTTTGAACCTGATTGAAATGCAAAGCAAGGGTGACTCATTGTTAGGAGAAGTAAAGGCCACGGAAGGTATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR TCA 90 bp | TGGGTCAACCACTATTTAAAACCTTCAGACATAACCATAAGGTATTaGCTGGTTTGCAGGACAGCTCAGTCAGTGGGAAAAACCAATATC | + |
Preference number: 1 (lower is better) Translates to: WVNHYLKPSDITIRY*LVCRTAQSVGKTNI Trigger: GATATTGGTTTTTCCCACTGACTGAGCTGTCCTGCAAACCAGTCAATACCTTATGGTTATGTCTGAAGGTTTTAAATAGTGGTTGACCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR CCA 90 bp | ATATCCCTGTTGTATGTGGATAACAGTTGCAGGGGCTCTGGGGGCACCCAAGAGCAGAACCCCCTGGGCTaGCCTCCTGTCTCGAGCCGT | + |
Preference number: 2 (lower is better) Translates to: ISLLYVDNSCRGSGGTQEQNPLG*PPVSSR Trigger: ACGGCTCGAGACAGGAGGCCAGCCCAGGGGGTTCTG...CTCTTGGGTGCCCCCAGAGCCCCTGCAACTGTTATCCACATACAACAGGGATAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR CCA 90 bp | GGGTCACACTGGAGTCCTAGTGAGGAAGGGAGCTCAGGAGTCAGTGCTTTGCCAATAAGCAGAACCCCCTaGGCTGGCCTCCTGTCTCGA | + |
Preference number: 2 (lower is better) Translates to: GSHWSPSEEGSSGVSALPISRTP*AGLLSR Trigger: TCGAGACAGGAGGCCAGCCCAGGGGGTTCTGCTTAT...TGGCAAAGCACTGACTCCTGAGCTCCCTTCCTCACTAGGACTCCAGTGTGACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CAA 90 bp | TCCAATGGCAGTAAGAGAAAGGGATGGAGAGGTGCTAGCTCCCTTTaGTGGAGAGCCACGGGGACACATAAGCAGAACCCCCTGGGCTGG | + |
Preference number: 2 (lower is better) Translates to: SNGSKRKGWRGASSL*WRATGTHKQNPLGW Trigger: CCAGCCCAGGGGGTTCTGCTTATGTGTCCCCGTGGCTCTCCACAAAAGGGAGCTAGCACCTCTCCATCCCTTTCTCTTACTGCCATTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CAA 90 bp | TCAGGACTCCGGGGTACAGGGTGGAGAGAAGACTGCAATGACGCTTaGGTCCTCTCAGTGCAGGGTCACACTGGAGTCCTAGTGAGGAAG | + |
Preference number: 2 (lower is better) Translates to: SGLRGTGWREDCNDA*VLSVQGHTGVLVRK Trigger: CTTCCTCACTAGGACTCCAGTGTGACCCTGCACTGAGAGGACCAAAGCGTCATTGCAGTCTTCTCTCCACCCTGTACCCCGGAGTCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CAA 90 bp | TCAGCATGGGCTTCATCTGTGCAGCCACGAGTGCACACCCCGCTGTaGAGCAAAAGACAGAAACAGAAGTGCAGCCTGACCCTGGGTTCC | + |
Preference number: 2 (lower is better) Translates to: SAWASSVQPRVHTPL*SKRQKQKCSLTLGS Trigger: GGAACCCAGGGTCAGGCTGCACTTCTGTTTCTGTCTTTTGCTCAACAGCGGGGTGTGCACTCGTGGCTGCACAGATGAAGCCCATGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CAA 90 bp | TCACACTGGAGTCCTAGTGAGGAAGGGAGCTCAGGAGTCAGTGCTTaGCCACTCCCTGGCATGTCTGTGGCATGTGTGTGGCTAGAGTCT | + |
Preference number: 2 (lower is better) Translates to: SHWSPSEEGSSGVSA*PLPGMSVACVWLES Trigger: AGACTCTAGCCACACACATGCCACAGACATGCCAGGGAGTGGCAAAGCACTGACTCCTGAGCTCCCTTCCTCACTAGGACTCCAGTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR TCA 90 bp | AGCTCTCCAGGGACATCAAGAGACCAAGGTTCAGCTCAGCCAATGCACACATCAGATGCAGGCTGTGTATaGGTGGGTGTGGGGGTGTCC | + |
Preference number: 2 (lower is better) Translates to: SSPGTSRDQGSAQPMHTSDAGCV*VGVGVS Trigger: GGACACCCCCACACCCACTCATACACAGCCTGCATC...TGATGTGTGCATTGGCTGAGCTGAACCTTGGTCTCTTGATGTCCCTGGAGAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR CCA 90 bp | GGGTCACACTGGAGTCCTAGTGAGGAAGGGAGCTCAGGAGTCAGTGCTTTGCCATCTGTGGCATGTGTGTaGCTAGAGTCTGGGGTCTCA | + |
Preference number: 2 (lower is better) Translates to: GSHWSPSEEGSSGVSALPSVACV*LESGVS Trigger: TGAGACCCCAGACTCTAGCCACACACATGCCACAGA...TGGCAAAGCACTGACTCCTGAGCTCCCTTCCTCACTAGGACTCCAGTGTGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR CCA 90 bp | ATATCCCTGTTGTATGTGGATAACAGTTGCAGGGGCTCTGGGGGCACCCAAGAGGCTAGCTCCCTTTTGTaGAGAGCCACGGGGACACAT | + |
Preference number: 2 (lower is better) Translates to: ISLLYVDNSCRGSGGTQEASSLL*RATGTH Trigger: ATGTGTCCCCGTGGCTCTCCACAAAAGGGAGCTAGC...CTCTTGGGTGCCCCCAGAGCCCCTGCAACTGTTATCCACATACAACAGGGATAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CAA 90 bp | TTCAGAGGAGTCACTCCTCCCGGGGAAGAATCAGGCAGTGTCTTCTaGGCACTATTGGTGGAAACAAGCCTGCTCGTTCCACCCCTATCT | + |
Preference number: 2 (lower is better) Translates to: FRGVTPPGEESGSVF*ALLVETSLLVPPLS Trigger: AGATAGGGGTGGAACGAGCAGGCTTGTTTCCACCAATAGTGCCAAGAAGACACTGCCTGATTCTTCCCCGGGAGGAGTGACTCCTCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR TCA 90 bp | ATATCCCTGTTGTATGTGGATAACAGTTGCAGGGGCTCTGGGGGCACCCAAGAGTGGGAGAGAAGAGCCTaGTGCCTTCAGGAATTGCAC | + |
Preference number: 2 (lower is better) Translates to: ISLLYVDNSCRGSGGTQEWERRA*CLQELH Trigger: GTGCAATTCCTGAAGGCATCAGGCTCTTCTCTCCCA...CTCTTGGGTGCCCCCAGAGCCCCTGCAACTGTTATCCACATACAACAGGGATAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR TCA 90 bp | GGCATTTCAGAGAGAGCCAAAGAGCTGAGTGCTGCACAGTCAGGCCGCTGCAGTCCATTTCTTTTCCCCTaGTGGGCAAATCTAATAGTG | + |
Preference number: 2 (lower is better) Translates to: GISERAKELSAAQSGRCSPFLFP*WANLIV Trigger: CACTATTAGATTTGCCCATCAGGGGAAAAGAAATGG...ACTGCAGCGGCCTGACTGTGCAGCACTCAGCTCTTTGGCTCTCTCTGAAATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
||
3UTR-3UTR CCA 90 bp | CATTTCTCCATGGGGGCTTGCGCACACACTTCACAAGGCTCAGAGGCACTTCTATCTTCTTGGCACTATTaGTGGAAACAAGCCTGCTCG | + |
Preference number: 2 (lower is better) Translates to: HFSMGACAHTSQGSEALLSSWHY*WKQACS Trigger: CGAGCAGGCTTGTTTCCACCAATAGTGCCAAGAAGA...TAGAAGTGCCTCTGAGCCTTGTGAAGTGTGTGCGCAAGCCCCCATGGAGAAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
||
3UTR-3UTR CCA 90 bp | TCATTATCCTGGACAGGGCTTTCCTTCTGTGTGGCAGGACCAGAGAGAGGAAGCAATACTATTTACAAATaGGGAGGGGAGGCCAGGGAG | + |
Preference number: 2 (lower is better) Translates to: SLSWTGLSFCVAGPERGSNTIYK*GGEARE Trigger: CTCCCTGGCCTCCCCTCCCCATTTGTAAATAGTATT...GCTTCCTCTCTCTGGTCCTGCCACACAGAAGGAAAGCCCTGTCCAGGATAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR CCA 90 bp | GGCATTTCAGAGAGAGCCAAAGAGCTGAGTGCTGCACAGTCAGGCCGCTGCAGTAAAATGCGGTCGTCCTaGATTTCAGGCTGTAACAAA | + |
Preference number: 2 (lower is better) Translates to: GISERAKELSAAQSGRCSKMRSS*ISGCNK Trigger: TTTGTTACAGCCTGAAATCCAGGACGACCGCATTTT...ACTGCAGCGGCCTGACTGTGCAGCACTCAGCTCTTTGGCTCTCTCTGAAATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR TCA 90 bp | GCCATCCTGGATTCAGATACAAGGCACATCAGAGGCATGAATAAGTACTTAGGACTCCACTCTCTCCTGTaGCTGCCTTTGTGGGGTGGA | + |
Preference number: 2 (lower is better) Translates to: AILDSDTRHIRGMNKYLGLHSLL*LPLWGG Trigger: TCCACCCCACAAAGGCAGTCACAGGAGAGAGTGGAG...TCCTAAGTACTTATTCATGCCTCTGATGTGCCTTGTATCTGAATCCAGGATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
||
3UTR-3UTR GCA 90 bp | AGCAAGGGTGTCAGCAACGCTCATTATCCTGGACAGGGCTTTCCTTCTGTGTGGGATGCCTTCAGGAATTaGACTTGCGGCCTGAAAATA | + |
Preference number: 2 (lower is better) Translates to: SKGVSNAHYPGQGFPSVWDAFRN*TCGLKI Trigger: TATTTTCAGGCCGCAAGTGCAATTCCTGAAGGCATC...CCACACAGAAGGAAAGCCCTGTCCAGGATAATGAGCGTTGCTGACACCCTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR CCA 90 bp | AGCTCTCCAGGGACATCAAGAGACCAAGGTTCAGCTCAGCCAATGCACACATCAAGTAAGAGAAAGGGATaGAGAGGTGCTAGCTCCCTT | + |
Preference number: 2 (lower is better) Translates to: SSPGTSRDQGSAQPMHTSSKRKG*RGASSL Trigger: AAGGGAGCTAGCACCTCTCCATCCCTTTCTCTTACT...TGATGTGTGCATTGGCTGAGCTGAACCTTGGTCTCTTGATGTCCCTGGAGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR GCA 90 bp | AGCTCTCCAGGGACATCAAGAGACCAAGGTTCAGCTCAGCCAATGCACACATCATTCAGGAATTGCACTTaGGGCCTGAAAATATGGTGG | + |
Preference number: 2 (lower is better) Translates to: SSPGTSRDQGSAQPMHTSFRNCT*GLKIWW Trigger: CCACCATATTTTCAGGCCGCAAGTGCAATTCCTGAA...TGATGTGTGCATTGGCTGAGCTGAACCTTGGTCTCTTGATGTCCCTGGAGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR GCA 90 bp | CTAGCCTTAAACTCTGAACAAAAAGTGCACACATCCACTAATTGCTCGCAATCCCTGAGCTTGGCCATCTaGCAGCTGGGAATCCACCAC | + |
Preference number: 2 (lower is better) Translates to: LALNSEQKVHTSTNCSQSLSLAI*QLGIHH Trigger: GTGGTGGATTCCCAGCTGGCAGATGGCCAAGCTCAG...GGATTGCGAGCAATTAGTGGATGTGTGCACTTTTTGTTCAGAGTTTAAGGCTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR CCA 90 bp | CTCAGCCAATGCACACATCAGTCTAAATCCCCATTTCAGCTCTCTATGGCAAACGGCTTTCCTTCTGTGTaGCAGGACCAGAGAGAGGAA | + |
Preference number: 2 (lower is better) Translates to: LSQCTHQSKSPFQLSMANGFPSV*QDQREE Trigger: TTCCTCTCTCTGGTCCTGCCACACAGAAGGAAAGCC...GTTTGCCATAGAGAGCTGAAATGGGGATTTAGACTGATGTGTGCATTGGCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CAA 90 bp | CCCAAGGCATGGAATCATTTCTATGAACCGAATGGTTATCTAATTTaGCCTGCACTCATGTTAGATCCCACCCCCACCTCCTGCCAGGAA | + |
Preference number: 2 (lower is better) Translates to: PKAWNHFYEPNGYLI*PALMLDPTPTSCQE Trigger: TTCCTGGCAGGAGGTGGGGGTGGGATCTAACATGAGTGCAGGCAAAATTAGATAACCATTCGGTTCATAGAAATGATTCCATGCCTTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR CCA 90 bp | GCCATCCTGGATTCAGATACAAGGCACATCAGAGGCATGAATAAGTACTTAGGATGCTTTGCCACTCCCTaGCATGTCTGTGGCATGTGT | + |
Preference number: 2 (lower is better) Translates to: AILDSDTRHIRGMNKYLGCFATP*HVCGMC Trigger: ACACATGCCACAGACATGCCAGGGAGTGGCAAAGCA...TCCTAAGTACTTATTCATGCCTCTGATGTGCCTTGTATCTGAATCCAGGATGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CAA 90 bp | TCTGAACAAAAAGTGCACACATCCACTAATTGCTCGCAATCCATCTaGTCTCATGCATCTCTGCTGGGTCCCTTGACTCTACTGAGCATC | + |
Preference number: 2 (lower is better) Translates to: SEQKVHTSTNCSQSI*SHASLLGPLTLLSI Trigger: GATGCTCAGTAGAGTCAAGGGACCCAGCAGAGATGCATGAGACAAGATGGATTGCGAGCAATTAGTGGATGTGTGCACTTTTTGTTCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR GCA 90 bp | CTAGCCTTAAACTCTGAACAAAAAGTGCACACATCCACTAATTGCTCGCAATCCAGAGACAAAGGGCCCTaGTGTCTGGAGACAGTGACA | + |
Preference number: 2 (lower is better) Translates to: LALNSEQKVHTSTNCSQSRDKGP*CLETVT Trigger: TGTCACTGTCTCCAGACAGCAGGGCCCTTTGTCTCT...GGATTGCGAGCAATTAGTGGATGTGTGCACTTTTTGTTCAGAGTTTAAGGCTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR GCA 90 bp | CATTTCTCCATGGGGGCTTGCGCACACACTTCACAAGGCTCAGAGGCACTTCTAACTCTGAACAAAAAGTaGACACATCCACTAATTGCT | + |
Preference number: 2 (lower is better) Translates to: HFSMGACAHTSQGSEALLTLNKK*THPLIA Trigger: AGCAATTAGTGGATGTGTGCACTTTTTGTTCAGAGT...TAGAAGTGCCTCTGAGCCTTGTGAAGTGTGTGCGCAAGCCCCCATGGAGAAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR GCA 90 bp | ATATCCCTGTTGTATGTGGATAACAGTTGCAGGGGCTCTGGGGGCACCCAAGAGTTATCTAATTTTGCCTaGACTCATGTTAGATCCCAC | + |
Preference number: 2 (lower is better) Translates to: ISLLYVDNSCRGSGGTQELSNFA*THVRSH Trigger: GTGGGATCTAACATGAGTGCAGGCAAAATTAGATAA...CTCTTGGGTGCCCCCAGAGCCCCTGCAACTGTTATCCACATACAACAGGGATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR CCA 90 bp | CTAGCCTTAAACTCTGAACAAAAAGTGCACACATCCACTAATTGCTCGCAATCCAGAGAGAGGAAGCCATaGAGCCTAGAGCCTGAGTCA | + |
Preference number: 2 (lower is better) Translates to: LALNSEQKVHTSTNCSQSRERKP*SLEPES Trigger: TGACTCAGGCTCTAGGCTCCATGGCTTCCTCTCTCT...GGATTGCGAGCAATTAGTGGATGTGTGCACTTTTTGTTCAGAGTTTAAGGCTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR TCA 90 bp | TTTCAAAATTTCAGTCCAAGGTGTTGGGTCAACCACTATTTAAAACCTTCAGACCTTCCTCCTCCTGCATaGATGGGGTCTCGACCTCAG | + |
Preference number: 2 (lower is better) Translates to: FQNFSPRCWVNHYLKPSDLPPPA*MGSRPQ Trigger: CTGAGGTCGAGACCCCATTCATGCAGGAGGAGGAAG...GTCTGAAGGTTTTAAATAGTGGTTGACCCAACACCTTGGACTGAAATTTTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR GCA 90 bp | TCAGCTGTCAAGATTTTTATAGAACACTCTCTTTGCATGAGCTACACTGCAAAGGAGCTCAGGAGTCAGTaGTTTGCCACTCCCTGGCAT | + |
Preference number: 2 (lower is better) Translates to: SAVKIFIEHSLCMSYTAKELRSQ*FATPWH Trigger: ATGCCAGGGAGTGGCAAAGCACTGACTCCTGAGCTC...CTTTGCAGTGTAGCTCATGCAAAGAGAGTGTTCTATAAAAATCTTGACAGCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR CCA 90 bp | TCAGCTGTCAAGATTTTTATAGAACACTCTCTTTGCATGAGCTACACTGCAAAGCTCCGGGGTACAGGGTaGAGAGAAGACTGCAATGAC | + |
Preference number: 2 (lower is better) Translates to: SAVKIFIEHSLCMSYTAKLRGTG*REDCND Trigger: GTCATTGCAGTCTTCTCTCCACCCTGTACCCCGGAG...CTTTGCAGTGTAGCTCATGCAAAGAGAGTGTTCTATAAAAATCTTGACAGCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR CCA 90 bp | TCAAACACTTGGCTCAGCGGAAACAAATTAGCAACTAAAAGCTTTTTCTCCCATGTTAAGGCAGGTGGATaGAGGGCAGAAGGGAAGGAG | + |
Preference number: 2 (lower is better) Translates to: SNTWLSGNKLATKSFFSHVKAGG*RAEGKE Trigger: CTCCTTCCCTTCTGCCCTCCATCCACCTGCCTTAAC...ATGGGAGAAAAAGCTTTTAGTTGCTAATTTGTTTCCGCTGAGCCAAGTGTTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR GCA 90 bp | TCAGCTGTCAAGATTTTTATAGAACACTCTCTTTGCATGAGCTACACTGCAAAGCCATCAGGGGACACATaGCTAAGTGGATTCCGCAAC | + |
Preference number: 2 (lower is better) Translates to: SAVKIFIEHSLCMSYTAKPSGDT*LSGFRN Trigger: GTTGCGGAATCCACTTAGGCATGTGTCCCCTGATGG...CTTTGCAGTGTAGCTCATGCAAAGAGAGTGTTCTATAAAAATCTTGACAGCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR GCA 90 bp | AAAGAGAGCAAAATCAGTTGCCATCCTAGGCAAGGAGAGTTCACTGATGCCTGTTCTCTTTGGATGAGCTaGAAAGTATCCAAACCTGAC | + |
Preference number: 2 (lower is better) Translates to: KESKISCHPRQGEFTDACSLWMS*KVSKPD Trigger: GTCAGGTTTGGATACTTTGCAGCTCATCCAAAGAGA...ACAGGCATCAGTGAACTCTCCTTGCCTAGGATGGCAACTGATTTTGCTCTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR CCA 90 bp | CTAGCCTTAAACTCTGAACAAAAAGTGCACACATCCACTAATTGCTCGCAATCCTCTTGGCACTATTGGTaGAAACAAGCCTGCTCGTTC | + |
Preference number: 2 (lower is better) Translates to: LALNSEQKVHTSTNCSQSSWHYW*KQACSF Trigger: GAACGAGCAGGCTTGTTTCCACCAATAGTGCCAAGA...GGATTGCGAGCAATTAGTGGATGTGTGCACTTTTTGTTCAGAGTTTAAGGCTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR CCA 90 bp | AGTCCAAGGTGTTGGGTCAACCACTATTTAAAACCTTCAGACATAACCATAAGGGTGTATGAGTGGGTGTaGGGGTGTCCTACAAACAAC | + |
Preference number: 2 (lower is better) Translates to: SPRCWVNHYLKPSDITIRVYEWV*GCPTNN Trigger: GTTGTTTGTAGGACACCCCCACACCCACTCATACAC...CCTTATGGTTATGTCTGAAGGTTTTAAATAGTGGTTGACCCAACACCTTGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR CCA 90 bp | AGTCCAAGGTGTTGGGTCAACCACTATTTAAAACCTTCAGACATAACCATAAGGCAGGCAGTGTCTTCTTaGCACTATTGGTGGAAACAA | + |
Preference number: 2 (lower is better) Translates to: SPRCWVNHYLKPSDITIRQAVSS*HYWWKQ Trigger: TTGTTTCCACCAATAGTGCCAAGAAGACACTGCCTG...CCTTATGGTTATGTCTGAAGGTTTTAAATAGTGGTTGACCCAACACCTTGGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR CCA 90 bp | CTCAGCCAATGCACACATCAGTCTAAATCCCCATTTCAGCTCTCTATGGCAAACTTAGTTATGTCTCTTTaGATGAGCTGCAAAGTATCC | + |
Preference number: 2 (lower is better) Translates to: LSQCTHQSKSPFQLSMANLVMSL*MSCKVS Trigger: GGATACTTTGCAGCTCATCCAAAGAGACATAACTAA...GTTTGCCATAGAGAGCTGAAATGGGGATTTAGACTGATGTGTGCATTGGCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CAA 90 bp | CCACTATTTAAAACCTTCAGACATAACCATAAGGTATTGACTGGTTaGCAGGACAGCTCAGTCAGTGGGAAAAACCAATATCCTAGCCTT | + |
Preference number: 2 (lower is better) Translates to: PLFKTFRHNHKVLTG*QDSSVSGKNQYPSL Trigger: AAGGCTAGGATATTGGTTTTTCCCACTGACTGAGCTGTCCTGCAAACCAGTCAATACCTTATGGTTATGTCTGAAGGTTTTAAATAGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CAA 90 bp | TTGGGTCAACCACTATTTAAAACCTTCAGACATAACCATAAGGTATaGACTGGTTTGCAGGACAGCTCAGTCAGTGGGAAAAACCAATAT | + |
Preference number: 2 (lower is better) Translates to: LGQPLFKTFRHNHKV*TGLQDSSVSGKNQY Trigger: ATATTGGTTTTTCCCACTGACTGAGCTGTCCTGCAAACCAGTCAATACCTTATGGTTATGTCTGAAGGTTTTAAATAGTGGTTGACCCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CCA 72 bp | GGTGCACTGAGTGTGGGTGTTCCCACAGACTCAGCATaGGCTTCATCTGTGCAGCCACGAGTGCACACCCCG | + |
Preference number: 3 (lower is better) Translates to: GALSVGVPTDSA*ASSVQPRVHTP Trigger: CGGGGTGTGCACTCGTGGCTGCACAGATGAAGCCCATGCTGAGTCTGTGGGAACACCCACACTCAGTGCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR GCA 72 bp | TGTAAGGGAGGGTGGCAGCCCCTTAAACAGGAGGGCTaGCAAGATCACAGTGGCCCTGAGCTTGGCCATCTG | + |
Preference number: 3 (lower is better) Translates to: CKGGWQPLKQEG*QDHSGPELGHL Trigger: CAGATGGCCAAGCTCAGGGCCACTGTGATCTTGGCAGCCCTCCTGTTTAAGGGGCTGCCACCCTCCCTTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR TCA 72 bp | AGGATGAGACGGGCATTTCAGAGAGAGCCAAAGAGCTaGGTGCTGCACAGTCAGGCCGCTGCAGTGGGTAGC | + |
Preference number: 3 (lower is better) Translates to: RMRRAFQREPKS*VLHSQAAAVGS Trigger: GCTACCCACTGCAGCGGCCTGACTGTGCAGCACTCAGCTCTTTGGCTCTCTCTGAAATGCCCGTCTCATCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR GCA 72 bp | GTCCTAGTGAGGAAGGGAGCTCAGGAGTCAGTGCTTTaGCACTCCCTGGCATGTCTGTGGCATGTGTGTGGC | + |
Preference number: 3 (lower is better) Translates to: VLVRKGAQESVL*HSLACLWHVCG Trigger: GCCACACACATGCCACAGACATGCCAGGGAGTGGCAAAGCACTGACTCCTGAGCTCCCTTCCTCACTAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR GCA 72 bp | TATCCTGGCGGCTCTGCTCTCTGCCTCTGCAGCAAGTaGTCTAATGAAGTGGTTCTCGCTAAGACCCCCGCC | + |
Preference number: 3 (lower is better) Translates to: YPGGSALCLCSK*SNEVVLAKTPA Trigger: GGCGGGGGTCTTAGCGAGAACCACTTCATTAGAGCACTTGCTGCAGAGGCAGAGAGCAGAGCCGCCAGGATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CCA 72 bp | GGAAGGGAGCTCAGGAGTCAGTGCTTTGCCACTCCCTaGCATGTCTGTGGCATGTGTGTGGCTAGAGTCTGG | + |
Preference number: 3 (lower is better) Translates to: GRELRSQCFATP*HVCGMCVARVW Trigger: CCAGACTCTAGCCACACACATGCCACAGACATGCCAGGGAGTGGCAAAGCACTGACTCCTGAGCTCCCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR GCA 72 bp | CAATCAGGACTCCGGGGTACAGGGTGGAGAGAAGACTaGAATGACGCTTTGGTCCTCTCAGTGCAGGGTCAC | + |
Preference number: 3 (lower is better) Translates to: QSGLRGTGWRED*NDALVLSVQGH Trigger: GTGACCCTGCACTGAGAGGACCAAAGCGTCATTGCAGTCTTCTCTCCACCCTGTACCCCGGAGTCCTGATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR GCA 72 bp | AGCAGTCCGATATCCCTGTTGTATGTGGATAACAGTTaGAGGGGCTCTGGGGGCACCCAAGAGGAGCTGGTG | + |
Preference number: 3 (lower is better) Translates to: SSPISLLYVDNS*RGSGGTQEELV Trigger: CACCAGCTCCTCTTGGGTGCCCCCAGAGCCCCTGCAACTGTTATCCACATACAACAGGGATATCGGACTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR GCA 72 bp | GACGGGCATTTCAGAGAGAGCCAAAGAGCTGAGTGCTaGACAGTCAGGCCGCTGCAGTGGGTAGCTCTGTTT | + |
Preference number: 3 (lower is better) Translates to: DGHFRESQRAEC*TVRPLQWVALF Trigger: AAACAGAGCTACCCACTGCAGCGGCCTGACTGTGCAGCACTCAGCTCTTTGGCTCTCTCTGAAATGCCCGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CCA 72 bp | TATAGCCCTGGCTATACACCACCCTGTAAGGGAGGGTaGCAGCCCCTTAAACAGGAGGGCTGCCAAGATCAC | + |
Preference number: 3 (lower is better) Translates to: YSPGYTPPCKGG*QPLKQEGCQDH Trigger: GTGATCTTGGCAGCCCTCCTGTTTAAGGGGCTGCCACCCTCCCTTACAGGGTGGTGTATAGCCAGGGCTATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CCA 72 bp | CTCCTCAGGTGGGGACAAGATGTCTCCATTTCTCCATaGGGGCTTGCGCACACACTTCACAAGGCTCAGAGG | + |
Preference number: 3 (lower is better) Translates to: LLRWGQDVSISP*GLAHTLHKAQR Trigger: CCTCTGAGCCTTGTGAAGTGTGTGCGCAAGCCCCCATGGAGAAATGGAGACATCTTGTCCCCACCTGAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CCA 72 bp | GTGACTGCCTTTGTGGGGTGGAAGCAGAATTTATCCTaGCGGCTCTGCTCTCTGCCTCTGCAGCAAGTGCTC | + |
Preference number: 3 (lower is better) Translates to: VTAFVGWKQNLS*RLCSLPLQQVL Trigger: GAGCACTTGCTGCAGAGGCAGAGAGCAGAGCCGCCAGGATAAATTCTGCTTCCACCCCACAAAGGCAGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR TCA 72 bp | GATGTGACTGGACACTTCCTTCTTCCTCCTCCTGCATaGATGGGGTCTCGACCTCAGCTCTCCAGGGACATC | + |
Preference number: 3 (lower is better) Translates to: DVTGHFLLPPPA*MGSRPQLSRDI Trigger: GATGTCCCTGGAGAGCTGAGGTCGAGACCCCATTCATGCAGGAGGAGGAAGAAGGAAGTGTCCAGTCACATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR GCA 72 bp | GAGCCTGGGAGAGAAGAGCCTGATGCCTTCAGGAATTaGACTTGCGGCCTGAAAATATGGTGGGAGCCCCAT | + |
Preference number: 3 (lower is better) Translates to: EPGREEPDAFRN*TCGLKIWWEPH Trigger: ATGGGGCTCCCACCATATTTTCAGGCCGCAAGTGCAATTCCTGAAGGCATCAGGCTCTTCTCTCCCAGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CCA 72 bp | TGTCCTGTGGAGATGCAGGCTGTGTATGAGTGGGTGTaGGGGTGTCCTACAAACAACACAGTGGGCAGGAGA | + |
Preference number: 3 (lower is better) Translates to: CPVEMQAVYEWV*GCPTNNTVGRR Trigger: TCTCCTGCCCACTGTGTTGTTTGTAGGACACCCCCACACCCACTCATACACAGCCTGCATCTCCACAGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CCA 72 bp | CTCTCTCCACTCTCTCCTGTGACTGCCTTTGTGGGGTaGAAGCAGAATTTATCCTGGCGGCTCTGCTCTCTG | + |
Preference number: 3 (lower is better) Translates to: LSPLSPVTAFVG*KQNLSWRLCSL Trigger: CAGAGAGCAGAGCCGCCAGGATAAATTCTGCTTCCACCCCACAAAGGCAGTCACAGGAGAGAGTGGAGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CCA 72 bp | CAAAGAGCTGAGTGCTGCACAGTCAGGCCGCTGCAGTaGGTAGCTCTGTTTCTGCCTAGAGAGGCAAAGACA | + |
Preference number: 3 (lower is better) Translates to: QRAECCTVRPLQ*VALFLPREAKT Trigger: TGTCTTTGCCTCTCTAGGCAGAAACAGAGCTACCCACTGCAGCGGCCTGACTGTGCAGCACTCAGCTCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR TCA 72 bp | AAGAGCCTGATGCCTTCAGGAATTGCACTTGCGGCCTaGAAATATGGTGGGAGCCCCATCTGCCTCTGCAGA | + |
Preference number: 3 (lower is better) Translates to: KSLMPSGIALAA*KYGGSPICLCR Trigger: TCTGCAGAGGCAGATGGGGCTCCCACCATATTTTCAGGCCGCAAGTGCAATTCCTGAAGGCATCAGGCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR GCA 72 bp | GTGGGGACAAGATGTCTCCATTTCTCCATGGGGGCTTaGGCACACACTTCACAAGGCTCAGAGGCACTTCTA | + |
Preference number: 3 (lower is better) Translates to: VGTRCLHFSMGA*AHTSQGSEALL Trigger: TAGAAGTGCCTCTGAGCCTTGTGAAGTGTGTGCGCAAGCCCCCATGGAGAAATGGAGACATCTTGTCCCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
||
3UTR CCA 72 bp | CCGGGGAAGAATCAGGCAGTGTCTTCTTGGCACTATTaGTGGAAACAAGCCTGCTCGTTCCACCCCTATCTC | + |
Preference number: 3 (lower is better) Translates to: PGKNQAVSSWHY*WKQACSFHPYL Trigger: GAGATAGGGGTGGAACGAGCAGGCTTGTTTCCACCAATAGTGCCAAGAAGACACTGCCTGATTCTTCCCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
||
3UTR CCA 72 bp | TCACTCCTCCCGGGGAAGAATCAGGCAGTGTCTTCTTaGCACTATTGGTGGAAACAAGCCTGCTCGTTCCAC | + |
Preference number: 3 (lower is better) Translates to: SLLPGKNQAVSS*HYWWKQACSFH Trigger: GTGGAACGAGCAGGCTTGTTTCCACCAATAGTGCCAAGAAGACACTGCCTGATTCTTCCCCGGGAGGAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
||
3UTR CCA 72 bp | GCCTTCAGGAATTGCACTTGCGGCCTGAAAATATGGTaGGAGCCCCATCTGCCTCTGCAGACATCCAATCAG | + |
Preference number: 3 (lower is better) Translates to: AFRNCTCGLKIW*EPHLPLQTSNQ Trigger: CTGATTGGATGTCTGCAGAGGCAGATGGGGCTCCCACCATATTTTCAGGCCGCAAGTGCAATTCCTGAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
||
3UTR CCA 72 bp | TTCCTTCTGTGTGGCAGGACCAGAGAGAGGAAGCCATaGAGCCTAGAGCCTGAGTCAGAAGACAGTATCCAC | + |
Preference number: 3 (lower is better) Translates to: FLLCGRTRERKP*SLEPESEDSIH Trigger: GTGGATACTGTCTTCTGACTCAGGCTCTAGGCTCCATGGCTTCCTCTCTCTGGTCCTGCCACACAGAAGGAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
||
3UTR CCA 72 bp | AACGCTCATTATCCTGGACAGGGCTTTCCTTCTGTGTaGCAGGACCAGAGAGAGGAAGCCATGGAGCCTAGA | + |
Preference number: 3 (lower is better) Translates to: NAHYPGQGFPSV*QDQREEAMEPR Trigger: TCTAGGCTCCATGGCTTCCTCTCTCTGGTCCTGCCACACAGAAGGAAAGCCCTGTCCAGGATAATGAGCGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
||
3UTR CCA 72 bp | CGGAAGAAGAAAGCAGTCCGATATCCCTGTTGTATGTaGATAACAGTTGCAGGGGCTCTGGGGGCACCCAAG | + |
Preference number: 3 (lower is better) Translates to: RKKKAVRYPCCM*ITVAGALGAPK Trigger: CTTGGGTGCCCCCAGAGCCCCTGCAACTGTTATCCACATACAACAGGGATATCGGACTGCTTTCTTCTTCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
||
3UTR TCA 72 bp | CACAAGGCCTGTGAGCCATGCTCGAAAAAGACAGGATaGGACGGGCATTTCAGAGAGAGCCAAAGAGCTGAG | + |
Preference number: 3 (lower is better) Translates to: HKACEPCSKKTG*DGHFRESQRAE Trigger: CTCAGCTCTTTGGCTCTCTCTGAAATGCCCGTCTCATCCTGTCTTTTTCGAGCATGGCTCACAGGCCTTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
||
3UTR GCA 72 bp | GGTGGAAGCAGAATTTATCCTGGCGGCTCTGCTCTCTaGCTCTGCAGCAAGTGCTCTAATGAAGTGGTTCTC | + |
Preference number: 3 (lower is better) Translates to: GGSRIYPGGSAL*LCSKCSNEVVL Trigger: GAGAACCACTTCATTAGAGCACTTGCTGCAGAGGCAGAGAGCAGAGCCGCCAGGATAAATTCTGCTTCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CCA 72 bp | GGGAAGAATCAGGCAGTGTCTTCTTGGCACTATTGGTaGAAACAAGCCTGCTCGTTCCACCCCTATCTCAGC | + |
Preference number: 3 (lower is better) Translates to: GKNQAVSSWHYW*KQACSFHPYLS Trigger: GCTGAGATAGGGGTGGAACGAGCAGGCTTGTTTCCACCAATAGTGCCAAGAAGACACTGCCTGATTCTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
||
3UTR CCA 72 bp | TGTTGGCAAGAATCAGGCAGATGTCCACTCCTCAGGTaGGGACAAGATGTCTCCATTTCTCCATGGGGGCTT | + |
Preference number: 3 (lower is better) Translates to: CWQESGRCPLLR*GQDVSISPWGL Trigger: AAGCCCCCATGGAGAAATGGAGACATCTTGTCCCCACCTGAGGAGTGGACATCTGCCTGATTCTTGCCAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
||
3UTR-3UTR CAA 90 bp | AGCAAGGGTGTCAGCAACGCTCATTATCCTGGACAGGGCTTTCCTTCTGTGTGGGTCTTCTTGGCACTATaGGTGGAAACAAGCCTGCTC | + |
Preference number: 3 (lower is better) Translates to: SKGVSNAHYPGQGFPSVWVFLAL*VETSLL Trigger: GAGCAGGCTTGTTTCCACCAATAGTGCCAAGAAGAC...CCACACAGAAGGAAAGCCCTGTCCAGGATAATGAGCGTTGCTGACACCCTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
||
3UTR TCA 72 bp | ACAGAGCTATTGTCCTGTGGAGATGCAGGCTGTGTATaGGTGGGTGTGGGGGTGTCCTACAAACAACACAGT | + |
Preference number: 3 (lower is better) Translates to: TELLSCGDAGCV*VGVGVSYKQHS Trigger: ACTGTGTTGTTTGTAGGACACCCCCACACCCACTCATACACAGCCTGCATCTCCACAGGACAATAGCTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
||
3UTR TCA 72 bp | CAGGACCAGAGAGAGGAAGCCATGGAGCCTAGAGCCTaGGTCAGAAGACAGTATCCACCATTCCCATGTATT | + |
Preference number: 3 (lower is better) Translates to: QDQREEAMEPRA*VRRQYPPFPCI Trigger: AATACATGGGAATGGTGGATACTGTCTTCTGACTCAGGCTCTAGGCTCCATGGCTTCCTCTCTCTGGTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
||
3UTR GCA 72 bp | AGCAGAATTTATCCTGGCGGCTCTGCTCTCTGCCTCTaGAGCAAGTGCTCTAATGAAGTGGTTCTCGCTAAG | + |
Preference number: 3 (lower is better) Translates to: SRIYPGGSALCL*SKCSNEVVLAK Trigger: CTTAGCGAGAACCACTTCATTAGAGCACTTGCTGCAGAGGCAGAGAGCAGAGCCGCCAGGATAAATTCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
||
3UTR-3UTR CAA 90 bp | TCAAGTACAAAGACTAGGGTCCTAGATTCCGGGGACTCTCCTGTTCCAAAGGCCTCAGGCAGTGTCTTCTaGGCACTATTGGTGGAAACA | + |
Preference number: 3 (lower is better) Translates to: SSTKTRVLDSGDSPVPKASGSVF*ALLVET Trigger: TGTTTCCACCAATAGTGCCAAGAAGACACTGCCTGA...GGCCTTTGGAACAGGAGAGTCCCCGGAATCTAGGACCCTAGTCTTTGTACTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
||
3UTR-3UTR CAA 90 bp | TGGCAAACCCTTCCTCTCTCATCATGCAAACATTGCCTCACCCTAGGATTTTTCAGGGAGACAGAGCTATaGTCCTGTGGAGATGCAGGC | + |
Preference number: 3 (lower is better) Translates to: WQTLPLSSCKHCLTLGFFRETEL*SCGDAG Trigger: GCCTGCATCTCCACAGGACAATAGCTCTGTCTCCCT...GAAAAATCCTAGGGTGAGGCAATGTTTGCATGATGAGAGAGGAAGGGTTTGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
||
3UTR-3UTR CAA 90 bp | ATATCCCTGTTGTATGTGGATAACAGTTGCAGGGGCTCTGGGGGCACCCAAGAGCCTTTAAAGGGCTGTTaGAGTTCTCTGGCTTATGTC | + |
Preference number: 3 (lower is better) Translates to: ISLLYVDNSCRGSGGTQEPLKGC*SSLAYV Trigger: GACATAAGCCAGAGAACTCAAACAGCCCTTTAAAGG...CTCTTGGGTGCCCCCAGAGCCCCTGCAACTGTTATCCACATACAACAGGGATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
||
3UTR TCA 72 bp | GAACACTCTCTTTGCATGAGCTACACTGCAAAGTCCTaGCACTTCAGAGGCTCTTCCTCAATGCTGGCGATG | + |
Preference number: 3 (lower is better) Translates to: EHSLCMSYTAKS*HFRGSSSMLAM Trigger: CATCGCCAGCATTGAGGAAGAGCCTCTGAAGTGTCAGGACTTTGCAGTGTAGCTCATGCAAAGAGAGTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR CAA 90 bp | TCAGCTGTCAAGATTTTTATAGAACACTCTCTTTGCATGAGCTACACTGCAAAGACAGTGGCCCTGAGCTaGGCCATCTGCCAGCTGGGA | + |
Preference number: 3 (lower is better) Translates to: SAVKIFIEHSLCMSYTAKTVALS*AICQLG Trigger: TCCCAGCTGGCAGATGGCCAAGCTCAGGGCCACTGT...CTTTGCAGTGTAGCTCATGCAAAGAGAGTGTTCTATAAAAATCTTGACAGCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
||
3UTR TCA 72 bp | CTCCTGTTCCAAAGGCCAACAGAAGACTTTGCTGGTTaGAAGGGGAAATCTTTTCACTATGGCCAGCTGGGA | + |
Preference number: 3 (lower is better) Translates to: LLFQRPTEDFAG*KGKSFHYGQLG Trigger: TCCCAGCTGGCCATAGTGAAAAGATTTCCCCTTTCAACCAGCAAAGTCTTCTGTTGGCCTTTGGAACAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR GCA 72 bp | CAGGGACATCAAGAGACCAAGGTTCAGCTCAGCCAATaGACACATCAGTCTAAATCCCCATTTCAGCTCTCT | + |
Preference number: 3 (lower is better) Translates to: QGHQETKVQLSQ*THQSKSPFQLS Trigger: AGAGAGCTGAAATGGGGATTTAGACTGATGTGTGCATTGGCTGAGCTGAACCTTGGTCTCTTGATGTCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR CAA 90 bp | CATTTCTCCATGGGGGCTTGCGCACACACTTCACAAGGCTCAGAGGCACTTCTATTGTTCTCTACATCTTaGCAAGACATCTCCATCACT | + |
Preference number: 3 (lower is better) Translates to: HFSMGACAHTSQGSEALLLFSTS*QDISIT Trigger: AGTGATGGAGATGTCTTGCAAAGATGTAGAGAACAA...TAGAAGTGCCTCTGAGCCTTGTGAAGTGTGTGCGCAAGCCCCCATGGAGAAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR CAA 90 bp | AGTCCAAGGTGTTGGGTCAACCACTATTTAAAACCTTCAGACATAACCATAAGGTCAGGAGTCAGTGCTTaGCCACTCCCTGGCATGTCT | + |
Preference number: 3 (lower is better) Translates to: SPRCWVNHYLKPSDITIRSGVSA*PLPGMS Trigger: AGACATGCCAGGGAGTGGCAAAGCACTGACTCCTGA...CCTTATGGTTATGTCTGAAGGTTTTAAATAGTGGTTGACCCAACACCTTGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
||
3UTR TCA 72 bp | ACCCCCAACTTCAACCTAATACTAGCTAGTAATATATaGCACCTTCCAGGGACAGGGGATCTCTGCCATCCT | + |
Preference number: 3 (lower is better) Translates to: TPNFNLILASNI*HLPGTGDLCHP Trigger: AGGATGGCAGAGATCCCCTGTCCCTGGAAGGTGTCATATATTACTAGCTAGTATTAGGTTGAAGTTGGGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR GCA 72 bp | GCAGTGTCTTCTTGGCACTATTGGTGGAAACAAGCCTaGTCGTTCCACCCCTATCTCAGCCCTAAAATAATT | + |
Preference number: 3 (lower is better) Translates to: AVSSWHYWWKQA*SFHPYLSPKII Trigger: AATTATTTTAGGGCTGAGATAGGGGTGGAACGAGCAGGCTTGTTTCCACCAATAGTGCCAAGAAGACACTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR GCA 72 bp | CCACCATTCCCATGTATTCATCCATCAGGGGACACATaGCTAAGTGGATTCCGCAACAGCGATGATGTTATA | + |
Preference number: 3 (lower is better) Translates to: PPFPCIHPSGDT*LSGFRNSDDVI Trigger: TATAACATCATCGCTGTTGCGGAATCCACTTAGGCATGTGTCCCCTGATGGATGAATACATGGGAATGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR GCA 72 bp | CTATGGCAAACCCTTCCTCTCTCATCATGCAAACATTaGCTCACCCTAGGATTTTTCCTGCTTAGGCTCTTT | + |
Preference number: 3 (lower is better) Translates to: LWQTLPLSSCKH*LTLGFFLLRLF Trigger: AAAGAGCCTAAGCAGGAAAAATCCTAGGGTGAGGCAATGTTTGCATGATGAGAGAGGAAGGGTTTGCCATAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR GCA 72 bp | TTCAGCTCTCTATGGCAAACCCTTCCTCTCTCATCATaGAAACATTGCCTCACCCTAGGATTTTTCCTGCTT | + |
Preference number: 3 (lower is better) Translates to: FSSLWQTLPLSS*KHCLTLGFFLL Trigger: AAGCAGGAAAAATCCTAGGGTGAGGCAATGTTTGCATGATGAGAGAGGAAGGGTTTGCCATAGAGAGCTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR CAA 90 bp | AAAGAGAGCAAAATCAGTTGCCATCCTAGGCAAGGAGAGTTCACTGATGCCTGTCTCATCATGCAAACATaGCCTCACCCTAGGATTTTT | + |
Preference number: 3 (lower is better) Translates to: KESKISCHPRQGEFTDACLIMQT*PHPRIF Trigger: AAAAATCCTAGGGTGAGGCAATGTTTGCATGATGAG...ACAGGCATCAGTGAACTCTCCTTGCCTAGGATGGCAACTGATTTTGCTCTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR CAA 90 bp | AAAGAGAGCAAAATCAGTTGCCATCCTAGGCAAGGAGAGTTCACTGATGCCTGTAACAATGAGTCACCCTaGCTTTGCATTTCAATCAGG | + |
Preference number: 3 (lower is better) Translates to: KESKISCHPRQGEFTDACNNESP*LCISIR Trigger: CCTGATTGAAATGCAAAGCAAGGGTGACTCATTGTT...ACAGGCATCAGTGAACTCTCCTTGCCTAGGATGGCAACTGATTTTGCTCTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR TCA 72 bp | AACAGCAGTTACTGTTTTTCTCCTCGTGCAGAAAGCTaGCCTCTTGGCCCAGAGGCACGGAATATTAATTTT | + |
Preference number: 3 (lower is better) Translates to: NSSYCFSPRAES*PLGPEARNINF Trigger: AAAATTAATATTCCGTGCCTCTGGGCCAAGAGGTCAGCTTTCTGCACGAGGAGAAAAACAGTAACTGCTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR GCA 72 bp | CCGTGGCCTTTACTTCTCCTAACAATGAGTCACCCTTaGTTTGCATTTCAATCAGGTTCAAAGACTCAAAGC | + |
Preference number: 3 (lower is better) Translates to: PWPLLLLTMSHP*FAFQSGSKTQS Trigger: GCTTTGAGTCTTTGAACCTGATTGAAATGCAAAGCAAGGGTGACTCATTGTTAGGAGAAGTAAAGGCCACGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CCA 72 bp | ATGTCCCATGTCTCTTGTTACAGATTCTATTCTGGATaGCTAATTTCTCAGAGACAAAGGGCCCTGCTGTCT | + |
Preference number: 3 (lower is better) Translates to: MSHVSCYRFYSG*LISQRQRALLS Trigger: AGACAGCAGGGCCCTTTGTCTCTGAGAAATTAGCCATCCAGAATAGAATCTGTAACAAGAGACATGGGACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CCA 72 bp | GCTTATGTCCCATGTCTCTTGTTACAGATTCTATTCTaGATGGCTAATTTCTCAGAGACAAAGGGCCCTGCT | + |
Preference number: 3 (lower is better) Translates to: AYVPCLLLQILF*MANFSETKGPA Trigger: AGCAGGGCCCTTTGTCTCTGAGAAATTAGCCATCCAGAATAGAATCTGTAACAAGAGACATGGGACATAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CCA 72 bp | GGAGTGCTAAGCTCTAGTCCAGGTTTCTCAAACACTTaGCTCAGCGGAAACAAATTAGCAACTAAAAGCTTT | + |
Preference number: 3 (lower is better) Translates to: GVLSSSPGFSNT*LSGNKLATKSF Trigger: AAAGCTTTTAGTTGCTAATTTGTTTCCGCTGAGCCAAGTGTTTGAGAAACCTGGACTAGAGCTTAGCACTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR CAA 90 bp | ATCAAGAGACCAAGGTTCAGCTCAGCCAATGCACACATCAGTCTAAATCCCCATTTTAGTTATGTCTCTTaGGATGAGCTGCAAAGTATC | + |
Preference number: 3 (lower is better) Translates to: IKRPRFSSANAHISLNPHFSYVS*DELQSI Trigger: GATACTTTGCAGCTCATCCAAAGAGACATAACTAAA...ATGGGGATTTAGACTGATGTGTGCATTGGCTGAGCTGAACCTTGGTCTCTTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR TCA 72 bp | ATGACAGCAAACACTAATGACACCAAATCCTATGTGTaGCATAGAAGGCAGGGCCATAATCCCCTTTATACA | + |
Preference number: 3 (lower is better) Translates to: MTANTNDTKSYV*HRRQGHNPLYT Trigger: TGTATAAAGGGGATTATGGCCCTGCCTTCTATGTCACACATAGGATTTGGTGTCATTAGTGTTTGCTGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR GCA 72 bp | TTAAACTCTGAACAAAAAGTGCACACATCCACTAATTaGTCGCAATCCATCTTGTCTCATGCATCTCTGCTG | + |
Preference number: 3 (lower is better) Translates to: LNSEQKVHTSTN*SQSILSHASLL Trigger: CAGCAGAGATGCATGAGACAAGATGGATTGCGAGCAATTAGTGGATGTGTGCACTTTTTGTTCAGAGTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR GCA 72 bp | GATTTTTATAGAACACTCTCTTTGCATGAGCTACACTaGAAAGTCCTGACACTTCAGAGGCTCTTCCTCAAT | + |
Preference number: 3 (lower is better) Translates to: DFYRTLSLHELH*KVLTLQRLFLN Trigger: ATTGAGGAAGAGCCTCTGAAGTGTCAGGACTTTGCAGTGTAGCTCATGCAAAGAGAGTGTTCTATAAAAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CCA 72 bp | CTTCCTTTTAGAAACCAAGAGAAAATGCGGTCGTCCTaGATTTCAGGCTGTAACAAACAGCAGTTACTGTTT | + |
Preference number: 3 (lower is better) Translates to: LPFRNQEKMRSS*ISGCNKQQLLF Trigger: AAACAGTAACTGCTGTTTGTTACAGCCTGAAATCCAGGACGACCGCATTTTCTCTTGGTTTCTAAAAGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR TCA 72 bp | CACTATTTAAAACCTTCAGACATAACCATAAGGTATTaGCTGGTTTGCAGGACAGCTCAGTCAGTGGGAAAA | + |
Preference number: 3 (lower is better) Translates to: HYLKPSDITIRY*LVCRTAQSVGK Trigger: TTTTCCCACTGACTGAGCTGTCCTGCAAACCAGTCAATACCTTATGGTTATGTCTGAAGGTTTTAAATAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR TCA 72 bp | CCAAATCTGTCTTCCCAAGGCATGGAATCATTTCTATaGACCGAATGGTTATCTAATTTTGCCTGCACTCAT | + |
Preference number: 3 (lower is better) Translates to: PNLSSQGMESFL*TEWLSNFACTH Trigger: ATGAGTGCAGGCAAAATTAGATAACCATTCGGTTCATAGAAATGATTCCATGCCTTGGGAAGACAGATTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR-3UTR CAA 90 bp | TCAGCTGTCAAGATTTTTATAGAACACTCTCTTTGCATGAGCTACACTGCAAAGTTTCAGTCCAAGGTGTaGGGTCAACCACTATTTAAA | + |
Preference number: 3 (lower is better) Translates to: SAVKIFIEHSLCMSYTAKFQSKV*GQPLFK Trigger: TTTAAATAGTGGTTGACCCAACACCTTGGACTGAAA...CTTTGCAGTGTAGCTCATGCAAAGAGAGTGTTCTATAAAAATCTTGACAGCTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR TCA 90 bp | GTGGGAGCCCCATCTGCCTCTGCAGACATCCAATCAGGACTCCGGGGTACAGGGGGCTGTGTATGGCTCTaGCAGAGGATGCTGGCTGGG | + |
Preference number: 4 (lower is better) Translates to: VGAPSASADIQSGLRGTGGCVWL*QRMLAG Trigger: CCCAGCCAGCATCCTCTGTCAGAGCCATACACAGCC...CCCTGTACCCCGGAGTCCTGATTGGATGTCTGCAGAGGCAGATGGGGCTCCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR TCA 90 bp | TCATTATCCTGGACAGGGCTTTCCTTCTGTGTGGCAGGACCAGAGAGAGGAAGCCCCCAGCTCCCCGGCTaGGGCTGGGCTCGACGACTC | + |
Preference number: 4 (lower is better) Translates to: SLSWTGLSFCVAGPERGSPQLPG*GWARRL Trigger: GAGTCGTCGAGCCCAGCCTCAGCCGGGGAGCTGGGG...GCTTCCTCTCTCTGGTCCTGCCACACAGAAGGAAAGCCCTGTCCAGGATAATGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR GCA 90 bp | CCCATCTGCCTCTGCAGACATCCAATCAGGACTCCGGGGTACAGGGTGGAGAGAGACAGGCTGAAGGGATaGAGGCGTGGGTTGGGGCTC | + |
Preference number: 4 (lower is better) Translates to: PICLCRHPIRTPGYRVERDRLKG*RRGLGL Trigger: GAGCCCCAACCCACGCCTGCATCCCTTCAGCCTGTC...TCTCTCCACCCTGTACCCCGGAGTCCTGATTGGATGTCTGCAGAGGCAGATGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR CCA 90 bp | AGCAAGGGTGTCAGCAACGCTCATTATCCTGGACAGGGCTTTCCTTCTGTGTGGCCCGGGGCATGGCTCTaGCAGGGCTGTGGGCCTGAG | + |
Preference number: 4 (lower is better) Translates to: SKGVSNAHYPGQGFPSVWPGAWL*QGCGPE Trigger: CTCAGGCCCACAGCCCTGCCAGAGCCATGCCCCGGG...CCACACAGAAGGAAAGCCCTGTCCAGGATAATGAGCGTTGCTGACACCCTTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CAA 72 bp | AACAGGAGGGCTGCCAAGATCACAGTGGCCCTGAGCTaGGCCATCTGCCAGCTGGGAATCCACCACGGTAGG | + |
Preference number: 4 (lower is better) Translates to: NRRAAKITVALS*AICQLGIHHGR Trigger: CCTACCGTGGTGGATTCCCAGCTGGCAGATGGCCAAGCTCAGGGCCACTGTGATCTTGGCAGCCCTCCTGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR TCA 90 bp | AGCAAGGGTGTCAGCAACGCTCATTATCCTGGACAGGGCTTTCCTTCTGTGTGGAGTCTCTCCGGGCTCTaGCAGCTCGCTCAGCTTGCG | + |
Preference number: 4 (lower is better) Translates to: SKGVSNAHYPGQGFPSVWSLSGL*QLAQLA Trigger: CGCAAGCTGAGCGAGCTGTCAGAGCCCGGAGAGACT...CCACACAGAAGGAAAGCCCTGTCCAGGATAATGAGCGTTGCTGACACCCTTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR GCA 90 bp | GGCATTTCAGAGAGAGCCAAAGAGCTGAGTGCTGCACAGTCAGGCCGCTGCAGTTGCCCTCAGAGTCACTaGTGTGACTACTGGGTGGTG | + |
Preference number: 4 (lower is better) Translates to: GISERAKELSAAQSGRCSCPQSH*CDYWVV Trigger: CACCACCCAGTAGTCACAGCAGTGACTCTGAGGGCA...ACTGCAGCGGCCTGACTGTGCAGCACTCAGCTCTTTGGCTCTCTCTGAAATGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR GCA 90 bp | ATATCCCTGTTGTATGTGGATAACAGTTGCAGGGGCTCTGGGGGCACCCAAGAGGGCTCTGACAGAGGATaGTGGCTGGGCAGAGCCATC | + |
Preference number: 4 (lower is better) Translates to: ISLLYVDNSCRGSGGTQEGSDRG*WLGRAI Trigger: GATGGCTCTGCCCAGCCAGCATCCTCTGTCAGAGCC...CTCTTGGGTGCCCCCAGAGCCCCTGCAACTGTTATCCACATACAACAGGGATAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR CCA 90 bp | ACAAAGACTAGGGTCCTAGATTCCGGGGACTCTCCTGTTCCAAAGGCCAACAGAGATGCAGGCGTGGGTTaGGGCTCAAGCTGCCCTCAG | + |
Preference number: 4 (lower is better) Translates to: TKTRVLDSGDSPVPKANRDAGVG*GSSCPQ Trigger: CTGAGGGCAGCTTGAGCCCCAACCCACGCCTGCATC...TCTGTTGGCCTTTGGAACAGGAGAGTCCCCGGAATCTAGGACCCTAGTCTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CAA 72 bp | AGTCCTAGTGAGGAAGGGAGCTCAGGAGTCAGTGCTTaGCCACTCCCTGGCATGTCTGTGGCATGTGTGTGG | + |
Preference number: 4 (lower is better) Translates to: SPSEEGSSGVSA*PLPGMSVACVW Trigger: CCACACACATGCCACAGACATGCCAGGGAGTGGCAAAGCACTGACTCCTGAGCTCCCTTCCTCACTAGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CAA 72 bp | CGGGGTACAGGGTGGAGAGAAGACTGCAATGACGCTTaGGTCCTCTCAGTGCAGGGTCACACTGGAGTCCTA | + |
Preference number: 4 (lower is better) Translates to: RGTGWREDCNDA*VLSVQGHTGVL Trigger: TAGGACTCCAGTGTGACCCTGCACTGAGAGGACCAAAGCGTCATTGCAGTCTTCTCTCCACCCTGTACCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR TCA 90 bp | ACAAAGACTAGGGTCCTAGATTCCGGGGACTCTCCTGTTCCAAAGGCCAACAGAGGGTCACTCAGGAGCTaGCCCAGGACGTTCTGGGAA | + |
Preference number: 4 (lower is better) Translates to: TKTRVLDSGDSPVPKANRGSLRS*PRTFWE Trigger: TTCCCAGAACGTCCTGGGTCAGCTCCTGAGTGACCC...TCTGTTGGCCTTTGGAACAGGAGAGTCCCCGGAATCTAGGACCCTAGTCTTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR CCA 90 bp | ATATCCCTGTTGTATGTGGATAACAGTTGCAGGGGCTCTGGGGGCACCCAAGAGACAGAGGATGCTGGCTaGGCAGAGCCATCTTGGTGG | + |
Preference number: 4 (lower is better) Translates to: ISLLYVDNSCRGSGGTQETEDAG*AEPSWW Trigger: CCACCAAGATGGCTCTGCCCAGCCAGCATCCTCTGT...CTCTTGGGTGCCCCCAGAGCCCCTGCAACTGTTATCCACATACAACAGGGATAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CAA 72 bp | GGTGGGGACAAGATGTCTCCATTTCTCCATGGGGGCTaGCGCACACACTTCACAAGGCTCAGAGGCACTTCT | + |
Preference number: 4 (lower is better) Translates to: GGDKMSPFLHGG*RTHFTRLRGTS Trigger: AGAAGTGCCTCTGAGCCTTGTGAAGTGTGTGCGCAAGCCCCCATGGAGAAATGGAGACATCTTGTCCCCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CAA 72 bp | GCTTCATCTGTGCAGCCACGAGTGCACACCCCGCTGTaGAGCAAAAGACAGAAACAGAAGTGCAGCCTGACC | + |
Preference number: 4 (lower is better) Translates to: ASSVQPRVHTPL*SKRQKQKCSLT Trigger: GGTCAGGCTGCACTTCTGTTTCTGTCTTTTGCTCAACAGCGGGGTGTGCACTCGTGGCTGCACAGATGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR TCA 90 bp | TGGCAAACCCTTCCTCTCTCATCATGCAAACATTGCCTCACCCTAGGATTTTTCGCCCCGACGATGCCCTaGGCAGAGAGGAGCCTCTGT | + |
Preference number: 4 (lower is better) Translates to: WQTLPLSSCKHCLTLGFFAPTMP*AERSLC Trigger: ACAGAGGCTCCTCTCTGCTCAGGGCATCGTCGGGGC...GAAAAATCCTAGGGTGAGGCAATGTTTGCATGATGAGAGAGGAAGGGTTTGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR CCA 90 bp | ACAAAGACTAGGGTCCTAGATTCCGGGGACTCTCCTGTTCCAAAGGCCAACAGAGCAGCTTGGTGGGAATaGGATAGCCCTCGGCAACCA | + |
Preference number: 4 (lower is better) Translates to: TKTRVLDSGDSPVPKANRAAWWE*DSPRQP Trigger: TGGTTGCCGAGGGCTATCCCATTCCCACCAAGCTGC...TCTGTTGGCCTTTGGAACAGGAGAGTCCCCGGAATCTAGGACCCTAGTCTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR CCA 90 bp | TCCTCCCGGGGAAGAATCAGGCAGTGTCTTCTTGGCACTATTGGTGGAAACAAGTCAGAGGCAGCTTGGTaGGAATGGGATAGCCCTCGG | + |
Preference number: 4 (lower is better) Translates to: SSRGRIRQCLLGTIGGNKSEAAW*EWDSPR Trigger: CCGAGGGCTATCCCATTCCCACCAAGCTGCCTCTGA...CTTGTTTCCACCAATAGTGCCAAGAAGACACTGCCTGATTCTTCCCCGGGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CAA 72 bp | AGTAAGAGAAAGGGATGGAGAGGTGCTAGCTCCCTTTaGTGGAGAGCCACGGGGACACATAAGCAGAACCCC | + |
Preference number: 4 (lower is better) Translates to: SKRKGWRGASSL*WRATGTHKQNP Trigger: GGGGTTCTGCTTATGTGTCCCCGTGGCTCTCCACAAAAGGGAGCTAGCACCTCTCCATCCCTTTCTCTTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CAA 72 bp | CCCGGGGAAGAATCAGGCAGTGTCTTCTTGGCACTATaGGTGGAAACAAGCCTGCTCGTTCCACCCCTATCT | + |
Preference number: 4 (lower is better) Translates to: PGEESGSVFLAL*VETSLLVPPLS Trigger: AGATAGGGGTGGAACGAGCAGGCTTGTTTCCACCAATAGTGCCAAGAAGACACTGCCTGATTCTTCCCCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CAA 72 bp | GTCACTCCTCCCGGGGAAGAATCAGGCAGTGTCTTCTaGGCACTATTGGTGGAAACAAGCCTGCTCGTTCCA | + |
Preference number: 4 (lower is better) Translates to: VTPPGEESGSVF*ALLVETSLLVP Trigger: TGGAACGAGCAGGCTTGTTTCCACCAATAGTGCCAAGAAGACACTGCCTGATTCTTCCCCGGGAGGAGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR TCA 90 bp | CAGCTCTCCAGGGACATCAAGAGACCAAGGTTCAGCTCAGCCAATGCACACATCGCTTATGTGGAGCTGTaGGGAGAGGAGATGTGGACA | + |
Preference number: 4 (lower is better) Translates to: QLSRDIKRPRFSSANAHIAYVEL*GEEMWT Trigger: TGTCCACATCTCCTCTCCTCACAGCTCCACATAAGC...GATGTGTGCATTGGCTGAGCTGAACCTTGGTCTCTTGATGTCCCTGGAGAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR GCA 90 bp | CTCAGCCAATGCACACATCAGTCTAAATCCCCATTTCAGCTCTCTATGGCAAACACAGCTCGCTCAGCTTaGGGTCCCACTGCAGGACGC | + |
Preference number: 4 (lower is better) Translates to: LSQCTHQSKSPFQLSMANTARSA*GPTAGR Trigger: GCGTCCTGCAGTGGGACCGCAAGCTGAGCGAGCTGT...GTTTGCCATAGAGAGCTGAAATGGGGATTTAGACTGATGTGTGCATTGGCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR GCA 90 bp | AGCAAGGGTGTCAGCAACGCTCATTATCCTGGACAGGGCTTTCCTTCTGTGTGGGTGTGCCAGCTAACTTaGAGGTTCGAGAGACCTTCC | + |
Preference number: 4 (lower is better) Translates to: SKGVSNAHYPGQGFPSVWVCQLT*RFERPS Trigger: GGAAGGTCTCTCGAACCTGCAAGTTAGCTGGCACAC...CCACACAGAAGGAAAGCCCTGTCCAGGATAATGAGCGTTGCTGACACCCTTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR GCA 90 bp | CTAGCCTTAAACTCTGAACAAAAAGTGCACACATCCACTAATTGCTCGCAATCCCACTGCAGGACGCTCTaGTCCCCGCTCTCCAGCACC | + |
Preference number: 4 (lower is better) Translates to: LALNSEQKVHTSTNCSQSHCRTL*SPLSST Trigger: GGTGCTGGAGAGCGGGGAGCAGAGCGTCCTGCAGTG...GGATTGCGAGCAATTAGTGGATGTGTGCACTTTTTGTTCAGAGTTTAAGGCTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR GCA 90 bp | AAAGAGAGCAAAATCAGTTGCCATCCTAGGCAAGGAGAGTTCACTGATGCCTGTAGGAGCTCCGAGAAGTaGGTGTGGTACATGAGGGCC | + |
Preference number: 4 (lower is better) Translates to: KESKISCHPRQGEFTDACRSSEK*VWYMRA Trigger: GGCCCTCATGTACCACACGCACTTCTCGGAGCTCCT...ACAGGCATCAGTGAACTCTCCTTGCCTAGGATGGCAACTGATTTTGCTCTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR CCA 90 bp | TCAAGTACAAAGACTAGGGTCCTAGATTCCGGGGACTCTCCTGTTCCAAAGGCCGAAGGAGAGTCCTATTaGTGTTCTCCAGCACCTCCA | + |
Preference number: 4 (lower is better) Translates to: SSTKTRVLDSGDSPVPKAEGESY*CSPAPP Trigger: TGGAGGTGCTGGAGAACACCAATAGGACTCTCCTTC...GGCCTTTGGAACAGGAGAGTCCCCGGAATCTAGGACCCTAGTCTTTGTACTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR TCA 90 bp | TCAAGTACAAAGACTAGGGTCCTAGATTCCGGGGACTCTCCTGTTCCAAAGGCCTGTCTTGATGGTAGCTaGAGGAAACTCTGTAGACAG | + |
Preference number: 4 (lower is better) Translates to: SSTKTRVLDSGDSPVPKACLDGS*RKLCRQ Trigger: CTGTCTACAGAGTTTCCTTCAGCTACCATCAAGACA...GGCCTTTGGAACAGGAGAGTCCCCGGAATCTAGGACCCTAGTCTTTGTACTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR TCA 90 bp | CTCAGCCAATGCACACATCAGTCTAAATCCCCATTTCAGCTCTCTATGGCAAACTCAGAGTCACTGCTGTaGCTACTGGGTGGTGTTGGT | + |
Preference number: 4 (lower is better) Translates to: LSQCTHQSKSPFQLSMANSESLL*LLGGVG Trigger: ACCAACACCACCCAGTAGTCACAGCAGTGACTCTGA...GTTTGCCATAGAGAGCTGAAATGGGGATTTAGACTGATGTGTGCATTGGCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR TCA 90 bp | TCAGCTGTCAAGATTTTTATAGAACACTCTCTTTGCATGAGCTACACTGCAAAGTGGGTAAATGGTGACTaGGTCCGGGGCTCCTCGCTC | + |
Preference number: 4 (lower is better) Translates to: SAVKIFIEHSLCMSYTAKWVNGD*VRGSSL Trigger: GAGCGAGGAGCCCCGGACTCAGTCACCATTTACCCA...CTTTGCAGTGTAGCTCATGCAAAGAGAGTGTTCTATAAAAATCTTGACAGCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR TCA 90 bp | CTAGCCTTAAACTCTGAACAAAAAGTGCACACATCCACTAATTGCTCGCAATCCCTGACCAGGTGCTGCTaGAGCTCCAACAGTACTGAC | + |
Preference number: 4 (lower is better) Translates to: LALNSEQKVHTSTNCSQSLTRCC*SSNSTD Trigger: GTCAGTACTGTTGGAGCTTCAGCAGCACCTGGTCAG...GGATTGCGAGCAATTAGTGGATGTGTGCACTTTTTGTTCAGAGTTTAAGGCTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR TCA 90 bp | AGTCCAAGGTGTTGGGTCAACCACTATTTAAAACCTTCAGACATAACCATAAGGCTTCCAGTTTGCTGCTaGCCAGGTGCTGCTGAAGCT | + |
Preference number: 4 (lower is better) Translates to: SPRCWVNHYLKPSDITIRLPVCC*PGAAEA Trigger: AGCTTCAGCAGCACCTGGTCAGCAGCAAACTGGAAG...CCTTATGGTTATGTCTGAAGGTTTTAAATAGTGGTTGACCCAACACCTTGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR GCA 90 bp | CTAGCCTTAAACTCTGAACAAAAAGTGCACACATCCACTAATTGCTCGCAATCCAGGTGCCAGTCTGTGTaGCAGCTAACTTGCAGGTTC | + |
Preference number: 4 (lower is better) Translates to: LALNSEQKVHTSTNCSQSRCQSV*QLTCRF Trigger: GAACCTGCAAGTTAGCTGGCACACAGACTGGCACCT...GGATTGCGAGCAATTAGTGGATGTGTGCACTTTTTGTTCAGAGTTTAAGGCTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR GCA 90 bp | TCAAGTACAAAGACTAGGGTCCTAGATTCCGGGGACTCTCCTGTTCCAAAGGCCAAAGAAGCTTCCAAATaGAACAGCAAAGCAAAGCAC | + |
Preference number: 4 (lower is better) Translates to: SSTKTRVLDSGDSPVPKAKEASK*NSKAKH Trigger: GTGCTTTGCTTTGCTGTTGCATTTGGAAGCTTCTTT...GGCCTTTGGAACAGGAGAGTCCCCGGAATCTAGGACCCTAGTCTTTGTACTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR CCA 90 bp | GCCATCCTGGATTCAGATACAAGGCACATCAGAGGCATGAATAAGTACTTAGGACTGCTCCTCTGTGATTaGCTCTGTCTTGATGGTAGC | + |
Preference number: 4 (lower is better) Translates to: AILDSDTRHIRGMNKYLGLLLCD*LCLDGS Trigger: GCTACCATCAAGACAGAGCCAATCACAGAGGAGCAG...TCCTAAGTACTTATTCATGCCTCTGATGTGCCTTGTATCTGAATCCAGGATGGC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CAA 72 bp | CAGTGTTGGTTGCCGAGAGCTCCTTTAAAGGGCTGTTaGAGTTCTCTGGCTTATGTCCCATGTCTCTTGTTA | + |
Preference number: 4 (lower is better) Translates to: QCWLPRAPLKGC*SSLAYVPCLLL Trigger: TAACAAGAGACATGGGACATAAGCCAGAGAACTCAAACAGCCCTTTAAAGGAGCTCTCGGCAACCAACACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CAA 72 bp | AAAGTGCACACATCCACTAATTGCTCGCAATCCATCTaGTCTCATGCATCTCTGCTGGGTCCCTTGACTCTA | + |
Preference number: 4 (lower is better) Translates to: KVHTSTNCSQSI*SHASLLGPLTL Trigger: TAGAGTCAAGGGACCCAGCAGAGATGCATGAGACAAGATGGATTGCGAGCAATTAGTGGATGTGTGCACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR TCA 90 bp | TCAGCTGTCAAGATTTTTATAGAACACTCTCTTTGCATGAGCTACACTGCAAAGTGTGTTCAGCCTGGATaGGAGGCGCTGGTGATGTTG | + |
Preference number: 4 (lower is better) Translates to: SAVKIFIEHSLCMSYTAKCVQPG*EALVML Trigger: CAACATCACCAGCGCCTCTCATCCAGGCTGAACACA...CTTTGCAGTGTAGCTCATGCAAAGAGAGTGTTCTATAAAAATCTTGACAGCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR TCA 90 bp | CTAGCCTTAAACTCTGAACAAAAAGTGCACACATCCACTAATTGCTCGCAATCCAAGCTCCAACAGTACTaGCTTCTCCAAGCTCGTCTC | + |
Preference number: 4 (lower is better) Translates to: LALNSEQKVHTSTNCSQSKLQQY*LLQARL Trigger: GAGACGAGCTTGGAGAAGTCAGTACTGTTGGAGCTT...GGATTGCGAGCAATTAGTGGATGTGTGCACTTTTTGTTCAGAGTTTAAGGCTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR CCA 90 bp | AGTCCAAGGTGTTGGGTCAACCACTATTTAAAACCTTCAGACATAACCATAAGGGCAGAGCCATCTTGGTaGCAGAAGGATAAGGCCCAT | + |
Preference number: 4 (lower is better) Translates to: SPRCWVNHYLKPSDITIRAEPSW*QKDKAH Trigger: ATGGGCCTTATCCTTCTGCCACCAAGATGGCTCTGC...CCTTATGGTTATGTCTGAAGGTTTTAAATAGTGGTTGACCCAACACCTTGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR CCA 90 bp | TTTCAAAATTTCAGTCCAAGGTGTTGGGTCAACCACTATTTAAAACCTTCAGACTCTGACAGAGGATGCTaGCTGGGCAGAGCCATCTTG | + |
Preference number: 4 (lower is better) Translates to: FQNFSPRCWVNHYLKPSDSDRGC*LGRAIL Trigger: CAAGATGGCTCTGCCCAGCCAGCATCCTCTGTCAGA...GTCTGAAGGTTTTAAATAGTGGTTGACCCAACACCTTGGACTGAAATTTTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CAA 72 bp | TGGAATCATTTCTATGAACCGAATGGTTATCTAATTTaGCCTGCACTCATGTTAGATCCCACCCCCACCTCC | + |
Preference number: 4 (lower is better) Translates to: WNHFYEPNGYLI*PALMLDPTPTS Trigger: GGAGGTGGGGGTGGGATCTAACATGAGTGCAGGCAAAATTAGATAACCATTCGGTTCATAGAAATGATTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CAA 72 bp | GTTACTGTTTTTCTCCTCGTGCAGAAAGCTGACCTCTaGGCCCAGAGGCACGGAATATTAATTTTCAAATGG | + |
Preference number: 4 (lower is better) Translates to: VTVFLLVQKADL*AQRHGILIFKW Trigger: CCATTTGAAAATTAATATTCCGTGCCTCTGGGCCAAGAGGTCAGCTTTCTGCACGAGGAGAAAAACAGTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR TCA 90 bp | TTTCAAAATTTCAGTCCAAGGTGTTGGGTCAACCACTATTTAAAACCTTCAGACGAGAAGTTTAAGAACTaGTCCACTTCGTGCGGCTCC | + |
Preference number: 4 (lower is better) Translates to: FQNFSPRCWVNHYLKPSDEKFKN*STSCGS Trigger: GGAGCCGCACGAAGTGGATCAGTTCTTAAACTTCTC...GTCTGAAGGTTTTAAATAGTGGTTGACCCAACACCTTGGACTGAAATTTTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CAA 72 bp | GGCTGTTTGAGTTCTCTGGCTTATGTCCCATGTCTCTaGTTACAGATTCTATTCTGGATGGCTAATTTCTCA | + |
Preference number: 4 (lower is better) Translates to: GCLSSLAYVPCL*LQILFWMANFS Trigger: TGAGAAATTAGCCATCCAGAATAGAATCTGTAACAAGAGACATGGGACATAAGCCAGAGAACTCAAACAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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3UTR CAA 72 bp | CCACTATTTAAAACCTTCAGACATAACCATAAGGTATaGACTGGTTTGCAGGACAGCTCAGTCAGTGGGAAA | + |
Preference number: 4 (lower is better) Translates to: PLFKTFRHNHKV*TGLQDSSVSGK Trigger: TTTCCCACTGACTGAGCTGTCCTGCAAACCAGTCAATACCTTATGGTTATGTCTGAAGGTTTTAAATAGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR CCA 90 bp | TCAAACACTTGGCTCAGCGGAAACAAATTAGCAACTAAAAGCTTTTTCTCCCATTTTCTCCTGCTTTCTTaGGCAGAAATCTTATTCTTG | + |
Preference number: 4 (lower is better) Translates to: SNTWLSGNKLATKSFFSHFLLLS*AEILFL Trigger: CAAGAATAAGATTTCTGCCCAAGAAAGCAGGAGAAA...ATGGGAGAAAAAGCTTTTAGTTGCTAATTTGTTTCCGCTGAGCCAAGTGTTTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS TCA 90 bp | CGAGAAGTGCGTGTGGTACATGAGGGCCTCAGTCTCTCCGGGCTCTaGCAGCTCGCTCAGCTTGCGGTCCCACTGCAGGACGCTCTGCTC | + |
Preference number: 5 (lower is better) Translates to: REVRVVHEGLSLSGL*QLAQLAVPLQDALL Trigger: GAGCAGAGCGTCCTGCAGTGGGACCGCAAGCTGAGCGAGCTGTCAGAGCCCGGAGAGACTGAGGCCCTCATGTACCACACGCACTTCTCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS CCA 90 bp | CAAGCTCGTCTCATTGGAGATAAGGAAATGGGGAAGATCCACCTCTaGCAGGGCCTCAAGCCCCGACGATGCCCTGAGCAGAGAGGAGCC | + |
Preference number: 5 (lower is better) Translates to: QARLIGDKEMGKIHL*QGLKPRRCPEQRGA Trigger: GGCTCCTCTCTGCTCAGGGCATCGTCGGGGCTTGAGGCCCTGCCAGAGGTGGATCTTCCCCATTTCCTTATCTCCAATGAGACGAGCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR CAA 90 bp | ATATCCCTGTTGTATGTGGATAACAGTTGCAGGGGCTCTGGGGGCACCCAAGAGGGATGCAGGCGTGGGTaGGGGCTCAAGCTGCCCTCA | + |
Preference number: 5 (lower is better) Translates to: ISLLYVDNSCRGSGGTQEGCRRG*GLKLPS Trigger: TGAGGGCAGCTTGAGCCCCAACCCACGCCTGCATCC...CTCTTGGGTGCCCCCAGAGCCCCTGCAACTGTTATCCACATACAACAGGGATAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS TCA 90 bp | CTCCTCGTCATTGAAGCTGTCGCTGGTAGCCGCATGGGTAAATGGTaGCTGAGTCCGGGGCTCCTCGCTCAGAGAGTAGCTGTGTTCAGC | + |
Preference number: 5 (lower is better) Translates to: LLVIEAVAGSRMGKW*LSPGLLAQRVAVFS Trigger: GCTGAACACAGCTACTCTCTGAGCGAGGAGCCCCGGACTCAGTCACCATTTACCCATGCGGCTACCAGCGACAGCTTCAATGACGAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS GCA 90 bp | AGGGATGCAGGCGTGGGTTGGGGCTCAAGCTGCCCTCAGAGTCACTaGTGTGACTACTGGGTGGTGTTGGTGGTAAGTGCAGTTGATCCA | + |
Preference number: 5 (lower is better) Translates to: RDAGVGWGSSCPQSH*CDYWVVLVVSAVDP Trigger: TGGATCAACTGCACTTACCACCAACACCACCCAGTAGTCACAGCAGTGACTCTGAGGGCAGCTTGAGCCCCAACCCACGCCTGCATCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS CCA 90 bp | GTGGGTTGGGGCTCAAGCTGCCCTCAGAGTCACTGCTGTGACTACTaGGTGGTGTTGGTGGTAAGTGCAGTTGATCCACGGAGGCTTCTT | + |
Preference number: 5 (lower is better) Translates to: VGWGSSCPQSHCCDY*VVLVVSAVDPRRLL Trigger: AAGAAGCCTCCGTGGATCAACTGCACTTACCACCAACACCACCCAGTAGTCACAGCAGTGACTCTGAGGGCAGCTTGAGCCCCAACCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR CAA 90 bp | CATTTCTCCATGGGGGCTTGCGCACACACTTCACAAGGCTCAGAGGCACTTCTATCGTTCCCTTCCAGTTaGCTGCTGACCAGGTGCTGC | + |
Preference number: 5 (lower is better) Translates to: HFSMGACAHTSQGSEALLSFPSS*LLTRCC Trigger: GCAGCACCTGGTCAGCAGCAAACTGGAAGGGAACGA...TAGAAGTGCCTCTGAGCCTTGTGAAGTGTGTGCGCAAGCCCCCATGGAGAAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS TCA 90 bp | TCCATTGACTCGCTCTTCTCTGAGAGGAAAGGGTCACTCAGGAGCTaGCCCAGGACGTTCTGGGAAAACTCGTCTAGGAGCTCCGAGAAG | + |
Preference number: 5 (lower is better) Translates to: SIDSLFSERKGSLRS*PRTFWENSSRSSEK Trigger: CTTCTCGGAGCTCCTAGACGAGTTTTCCCAGAACGTCCTGGGTCAGCTCCTGAGTGACCCTTTCCTCTCAGAGAAGAGCGAGTCAATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS GCA 90 bp | ATGGCTGTGATGGTCAGAGTGACAGAAGGGACAAGTCCCGGGGGCTaGTCCTCTGTGATTGGCTCTGTCTTGATGGTAGCTGAAGGAAAC | + |
Preference number: 5 (lower is better) Translates to: MAVMVRVTEGTSPGG*SSVIGSVLMVAEGN Trigger: GTTTCCTTCAGCTACCATCAAGACAGAGCCAATCACAGAGGAGCAGCCCCCGGGACTTGTCCCTTCTGTCACTCTGACCATCACAGCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS CCA 90 bp | ACGACTCTTCCAGGGGAGCGTGTTCCTCATAGATTAGCAGGTTCCTaGATCTCACCACGGAGGCTGTGTATGGCTCTGACAGAGGATGCT | + |
Preference number: 5 (lower is better) Translates to: TTLPGERVPHRLAGS*ISPRRLCMALTEDA Trigger: AGCATCCTCTGTCAGAGCCATACACAGCCTCCGTGGTGAGATCCAGGAACCTGCTAATCTATGAGGAACACGCTCCCCTGGAAGAGTCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR CAA 90 bp | CTCAGCCAATGCACACATCAGTCTAAATCCCCATTTCAGCTCTCTATGGCAAACGACAGCTCGCTCAGCTaGCGGTCCCACTGCAGGACG | + |
Preference number: 5 (lower is better) Translates to: LSQCTHQSKSPFQLSMANDSSLS*RSHCRT Trigger: CGTCCTGCAGTGGGACCGCAAGCTGAGCGAGCTGTC...GTTTGCCATAGAGAGCTGAAATGGGGATTTAGACTGATGTGTGCATTGGCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS CCA 90 bp | CTGTGTATGGCTCTGACAGAGGATGCTGGCTGGGCAGAGCCATCTTaGTGGCAGAAGGATAAGGCCCATAGCCTTGAAAGAAGCTTCCAA | + |
Preference number: 5 (lower is better) Translates to: LCMALTEDAGWAEPS*WQKDKAHSLERSFQ Trigger: TTGGAAGCTTCTTTCAAGGCTATGGGCCTTATCCTTCTGCCACCAAGATGGCTCTGCCCAGCCAGCATCCTCTGTCAGAGCCATACACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR CAA 90 bp | CATTTCTCCATGGGGGCTTGCGCACACACTTCACAAGGCTCAGAGGCACTTCTATGTGTGCCAGCTAACTaGCAGGTTCGAGAGACCTTC | + |
Preference number: 5 (lower is better) Translates to: HFSMGACAHTSQGSEALLCVPAN*QVRETF Trigger: GAAGGTCTCTCGAACCTGCAAGTTAGCTGGCACACA...TAGAAGTGCCTCTGAGCCTTGTGAAGTGTGTGCGCAAGCCCCCATGGAGAAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS CCA 90 bp | TGTATGGCTCTGACAGAGGATGCTGGCTGGGCAGAGCCATCTTGGTaGCAGAAGGATAAGGCCCATAGCCTTGAAAGAAGCTTCCAAATG | + |
Preference number: 5 (lower is better) Translates to: CMALTEDAGWAEPSW*QKDKAHSLERSFQM Trigger: CATTTGGAAGCTTCTTTCAAGGCTATGGGCCTTATCCTTCTGCCACCAAGATGGCTCTGCCCAGCCAGCATCCTCTGTCAGAGCCATACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS TCA 90 bp | GAAAGAAGCTTCCAAATGCAACAGCAAAGCAAAGCACAACGACCATaGGGCAGGTGCCAGTCTGTGTGCCAGCTAACTTGCAGGTTCGAG | + |
Preference number: 5 (lower is better) Translates to: ERSFQMQQQSKAQRP*GRCQSVCQLTCRFE Trigger: CTCGAACCTGCAAGTTAGCTGGCACACAGACTGGCACCTGCCTCATGGTCGTTGTGCTTTGCTTTGCTGTTGCATTTGGAAGCTTCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS GCA 90 bp | GGTGGCAGAAGGATAAGGCCCATAGCCTTGAAAGAAGCTTCCAAATaGAACAGCAAAGCAAAGCACAACGACCATGAGGCAGGTGCCAGT | + |
Preference number: 5 (lower is better) Translates to: GGRRIRPIALKEASK*NSKAKHNDHEAGAS Trigger: ACTGGCACCTGCCTCATGGTCGTTGTGCTTTGCTTTGCTGTTGCATTTGGAAGCTTCTTTCAAGGCTATGGGCCTTATCCTTCTGCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR CAA 90 bp | CATTTCTCCATGGGGGCTTGCGCACACACTTCACAAGGCTCAGAGGCACTTCTACTTTCTCCTGCTTTCTaGGGCAGAAATCTTATTCTT | + |
Preference number: 5 (lower is better) Translates to: HFSMGACAHTSQGSEALLLSPAF*GRNLIL Trigger: AAGAATAAGATTTCTGCCCAAGAAAGCAGGAGAAAG...TAGAAGTGCCTCTGAGCCTTGTGAAGTGTGTGCGCAAGCCCCCATGGAGAAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR CAA 90 bp | AGCTCTCCAGGGACATCAAGAGACCAAGGTTCAGCTCAGCCAATGCACACATCAGCAGAAATCTTATTCTaGATCTTTCTCCGGATTTTC | + |
Preference number: 5 (lower is better) Translates to: SSPGTSRDQGSAQPMHTSAEILF*IFLRIF Trigger: GAAAATCCGGAGAAAGATCAAGAATAAGATTTCTGC...TGATGTGTGCATTGGCTGAGCTGAACCTTGGTCTCTTGATGTCCCTGGAGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR CAA 90 bp | TGGCAAACCCTTCCTCTCTCATCATGCAAACATTGCCTCACCCTAGGATTTTTCGCTCCAAGTTCTCAGTaGAACAAGACTCCACTTTTT | + |
Preference number: 5 (lower is better) Translates to: WQTLPLSSCKHCLTLGFFAPSSQ*NKTPLF Trigger: AAAAAGTGGAGTCTTGTTCAACTGAGAACTTGGAGC...GAAAAATCCTAGGGTGAGGCAATGTTTGCATGATGAGAGAGGAAGGGTTTGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS-3UTR CAA 90 bp | TCAGCTGTCAAGATTTTTATAGAACACTCTCTTTGCATGAGCTACACTGCAAAGCTGAAGCTTCTGAAGTaGCTGAAGGAGAGTCCTATT | + |
Preference number: 5 (lower is better) Translates to: SAVKIFIEHSLCMSYTAKLKLLK*LKESPI Trigger: AATAGGACTCTCCTTCAGCAACTTCAGAAGCTTCAG...CTTTGCAGTGTAGCTCATGCAAAGAGAGTGTTCTATAAAAATCTTGACAGCTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS CAA 72 bp | GCCTCAGTCTCTCCGGGCTCTGACAGCTCGCTCAGCTaGCGGTCCCACTGCAGGACGCTCTGCTCCCCGCTC | + |
Preference number: 6 (lower is better) Translates to: ASVSPGSDSSLS*RSHCRTLCSPL Trigger: GAGCGGGGAGCAGAGCGTCCTGCAGTGGGACCGCAAGCTGAGCGAGCTGTCAGAGCCCGGAGAGACTGAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS CAA 90 bp | TACATGAGGGCCTCAGTCTCTCCGGGCTCTGACAGCTCGCTCAGCTaGCGGTCCCACTGCAGGACGCTCTGCTCCCCGCTCTCCAGCACC | + |
Preference number: 6 (lower is better) Translates to: YMRASVSPGSDSSLS*RSHCRTLCSPLSST Trigger: GGTGCTGGAGAGCGGGGAGCAGAGCGTCCTGCAGTGGGACCGCAAGCTGAGCGAGCTGTCAGAGCCCGGAGAGACTGAGGCCCTCATGTA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS TCA 72 bp | CGTGTGGTACATGAGGGCCTCAGTCTCTCCGGGCTCTaGCAGCTCGCTCAGCTTGCGGTCCCACTGCAGGAC | + |
Preference number: 6 (lower is better) Translates to: RVVHEGLSLSGL*QLAQLAVPLQD Trigger: GTCCTGCAGTGGGACCGCAAGCTGAGCGAGCTGTCAGAGCCCGGAGAGACTGAGGCCCTCATGTACCACACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS TCA 72 bp | ACTCGTCTAGGAGCTCCGAGAAGTGCGTGTGGTACATaGGGGCCTCAGTCTCTCCGGGCTCTGACAGCTCGC | + |
Preference number: 6 (lower is better) Translates to: TRLGAPRSACGT*GPQSLRALTAR Trigger: GCGAGCTGTCAGAGCCCGGAGAGACTGAGGCCCTCATGTACCACACGCACTTCTCGGAGCTCCTAGACGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS GCA 72 bp | GGCGTGGGTTGGGGCTCAAGCTGCCCTCAGAGTCACTaGTGTGACTACTGGGTGGTGTTGGTGGTAAGTGCA | + |
Preference number: 6 (lower is better) Translates to: GVGWGSSCPQSH*CDYWVVLVVSA Trigger: TGCACTTACCACCAACACCACCCAGTAGTCACAGCAGTGACTCTGAGGGCAGCTTGAGCCCCAACCCACGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS GCA 72 bp | TTCTCCTCTTCTGTCAGGACCAGGGGGCCCGATCCCTaGAGCTTATGTGGAGCTGTGAGGAGAGGAGATGTG | + |
Preference number: 6 (lower is better) Translates to: FSSSVRTRGPDP*SLCGAVRRGDV Trigger: CACATCTCCTCTCCTCACAGCTCCACATAAGCTGCAGGGATCGGGCCCCCTGGTCCTGACAGAAGAGGAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS CCA 72 bp | CTCATTGGAGATAAGGAAATGGGGAAGATCCACCTCTaGCAGGGCCTCAAGCCCCGACGATGCCCTGAGCAG | + |
Preference number: 6 (lower is better) Translates to: LIGDKEMGKIHL*QGLKPRRCPEQ Trigger: CTGCTCAGGGCATCGTCGGGGCTTGAGGCCCTGCCAGAGGTGGATCTTCCCCATTTCCTTATCTCCAATGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS TCA 72 bp | ATTGAAGCTGTCGCTGGTAGCCGCATGGGTAAATGGTaGCTGAGTCCGGGGCTCCTCGCTCAGAGAGTAGCT | + |
Preference number: 6 (lower is better) Translates to: IEAVAGSRMGKW*LSPGLLAQRVA Trigger: AGCTACTCTCTGAGCGAGGAGCCCCGGACTCAGTCACCATTTACCCATGCGGCTACCAGCGACAGCTTCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS CCA 72 bp | GGCTCAAGCTGCCCTCAGAGTCACTGCTGTGACTACTaGGTGGTGTTGGTGGTAAGTGCAGTTGATCCACGG | + |
Preference number: 6 (lower is better) Translates to: GSSCPQSHCCDY*VVLVVSAVDPR Trigger: CCGTGGATCAACTGCACTTACCACCAACACCACCCAGTAGTCACAGCAGTGACTCTGAGGGCAGCTTGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS TCA 72 bp | TCGCTCTTCTCTGAGAGGAAAGGGTCACTCAGGAGCTaGCCCAGGACGTTCTGGGAAAACTCGTCTAGGAGC | + |
Preference number: 6 (lower is better) Translates to: SLFSERKGSLRS*PRTFWENSSRS Trigger: GCTCCTAGACGAGTTTTCCCAGAACGTCCTGGGTCAGCTCCTGAGTGACCCTTTCCTCTCAGAGAAGAGCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS GCA 72 bp | ATGGTCAGAGTGACAGAAGGGACAAGTCCCGGGGGCTaGTCCTCTGTGATTGGCTCTGTCTTGATGGTAGCT | + |
Preference number: 6 (lower is better) Translates to: MVRVTEGTSPGG*SSVIGSVLMVA Trigger: AGCTACCATCAAGACAGAGCCAATCACAGAGGAGCAGCCCCCGGGACTTGTCCCTTCTGTCACTCTGACCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS CCA 72 bp | TCTCCTCAGATTTTGTCAGAGGCAGCTTGGTGGGAATaGGATAGCCCTCGGCAACCAGGGTCCTCTTCTCCT | + |
Preference number: 6 (lower is better) Translates to: SPQILSEAAWWE*DSPRQPGSSSP Trigger: AGGAGAAGAGGACCCTGGTTGCCGAGGGCTATCCCATTCCCACCAAGCTGCCTCTGACAAAATCTGAGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS CCA 72 bp | CTGACAGAGGATGCTGGCTGGGCAGAGCCATCTTGGTaGCAGAAGGATAAGGCCCATAGCCTTGAAAGAAGC | + |
Preference number: 6 (lower is better) Translates to: LTEDAGWAEPSW*QKDKAHSLERS Trigger: GCTTCTTTCAAGGCTATGGGCCTTATCCTTCTGCCACCAAGATGGCTCTGCCCAGCCAGCATCCTCTGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS CAA 72 bp | GAGGCGCTGGTGATGTTGGAGATGGCTCCACCTCCATaGACTCGCTCTTCTCTGAGAGGAAAGGGTCACTCA | + |
Preference number: 6 (lower is better) Translates to: EALVMLEMAPPP*TRSSLRGKGHS Trigger: TGAGTGACCCTTTCCTCTCAGAGAAGAGCGAGTCAATGGAGGTGGAGCCATCTCCAACATCACCAGCGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS CAA 90 bp | GGTTCGAGAGACCTTCCCCATCACCAAAGTCTGAAGCTTCTGAAGTaGCTGAAGGAGAGTCCTATTGGTGTTCTCCAGCACCTCCACCTT | + |
Preference number: 6 (lower is better) Translates to: GSRDLPHHQSLKLLK*LKESPIGVLQHLHL Trigger: AAGGTGGAGGTGCTGGAGAACACCAATAGGACTCTCCTTCAGCAACTTCAGAAGCTTCAGACTTTGGTGATGGGGAAGGTCTCTCGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS CAA 90 bp | GCTGGGCAGAGCCATCTTGGTGGCAGAAGGATAAGGCCCATAGCCTaGAAAGAAGCTTCCAAATGCAACAGCAAAGCAAAGCACAACGAC | + |
Preference number: 6 (lower is better) Translates to: AGQSHLGGRRIRPIA*KEASKCNSKAKHND Trigger: GTCGTTGTGCTTTGCTTTGCTGTTGCATTTGGAAGCTTCTTTCAAGGCTATGGGCCTTATCCTTCTGCCACCAAGATGGCTCTGCCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS CAA 72 bp | GACAGGTACCATTTTTCACTCTCCACCTCCTCGTCATaGAAGCTGTCGCTGGTAGCCGCATGGGTAAATGGT | + |
Preference number: 6 (lower is better) Translates to: DRYHFSLSTSSS*KLSLVAAWVNG Trigger: ACCATTTACCCATGCGGCTACCAGCGACAGCTTCAATGACGAGGAGGTGGAGAGTGAAAAATGGTACCTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS TCA 72 bp | TCCACGGAGGCTTCTTTCGGGGAGAAGTTTAAGAACTaGTCCACTTCGTGCGGCTCCAGCTTAATCTTAGGA | + |
Preference number: 6 (lower is better) Translates to: STEASFGEKFKN*STSCGSSLILG Trigger: TCCTAAGATTAAGCTGGAGCCGCACGAAGTGGATCAGTTCTTAAACTTCTCCCCGAAAGAAGCCTCCGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS CAA 72 bp | GACCTTCCCCATCACCAAAGTCTGAAGCTTCTGAAGTaGCTGAAGGAGAGTCCTATTGGTGTTCTCCAGCAC | + |
Preference number: 6 (lower is better) Translates to: DLPHHQSLKLLK*LKESPIGVLQH Trigger: GTGCTGGAGAACACCAATAGGACTCTCCTTCAGCAACTTCAGAAGCTTCAGACTTTGGTGATGGGGAAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |
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CDS TCA 72 bp | CTGCTCCTCTGTGATTGGCTCTGTCTTGATGGTAGCTaGAGGAAACTCTGTAGACAGGTACCATTTTTCACT | + |
Preference number: 6 (lower is better) Translates to: LLLCDWLCLDGS*RKLCRQVPFFT Trigger: AGTGAAAAATGGTACCTGTCTACAGAGTTTCCTTCAGCTACCATCAAGACAGAGCCAATCACAGAGGAGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041093.6 |