Pregenerated sensors for CREB3L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027230Ensembl transcript IDs: ENSMUST00000028663.5
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTATTTACAAACGATTTCTGTTCTTGGTCTCTGTACAGTAGGAGATaGGGGTGTGTGTTTGTGTGTGTATGTCTGCTTGTGTGTTTGTGT | + |
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Preference number: 1 (lower is better) Translates to: LFTNDFCSWSLYSRR*GCVFVCVCLLVCLC Trigger: ACACAAACACACAAGCAGACATACACACACAAACACACACCCCCATCTCCTACTGTACAGAGACCAAGAACAGAAATCGTTTGTAAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| 3UTR-3UTR CCA 90 bp | GCTTGTGTGTTTGTGTATGAGGGGGCCAGGAACAGTGGTTGCGTTGGTCACTATAAGGTGGGAACGGAGTaGTCAGCCCAGGGGAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: ACVFVYEGARNSGCVGHYKVGTE*SAQGSS Trigger: ACTGCTCCCCTGGGCTGACCACTCCGTTCCCACCTT...ATAGTGACCAACGCAACCACTGTTCCTGGCCCCCTCATACACAAACACACAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| 3UTR GCA 72 bp | ATCTGGGTCATCGAGCAAGAGAACGCCTCTTCTGGGTaGCAGGGTGTCCGTCCTGTGTCCTGGGTCTTGGAG | + |
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Preference number: 3 (lower is better) Translates to: IWVIEQENASSG*QGVRPVSWVLE Trigger: CTCCAAGACCCAGGACACAGGACGGACACCCTGGCACCCAGAAGAGGCGTTCTCTTGCTCGATGACCCAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| 3UTR CCA 72 bp | CTGGATCTGGGTCATCGAGCAAGAGAACGCCTCTTCTaGGTGCCAGGGTGTCCGTCCTGTGTCCTGGGTCTT | + |
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Preference number: 3 (lower is better) Translates to: LDLGHRARERLF*VPGCPSCVLGL Trigger: AAGACCCAGGACACAGGACGGACACCCTGGCACCCAGAAGAGGCGTTCTCTTGCTCGATGACCCAGATCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| 3UTR TCA 72 bp | GCGTTGGTCACTATGGGAAGGAAACGGGTAGCCCAGTaGGTGGTTTATCGGAGGAGGACGGATAGTGGTAGG | + |
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Preference number: 3 (lower is better) Translates to: ALVTMGRKRVAQ*VVYRRRTDSGR Trigger: CCTACCACTATCCGTCCTCCTCCGATAAACCACTCACTGGGCTACCCGTTTCCTTCCCATAGTGACCAACGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| 3UTR GCA 72 bp | TGTGTGTTTGTGTATGAGGGGGCCAGGAACAGTGGTTaGGTTGGTCACTATGGGAAGGAAACGGGTAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: CVFVYEGARNSG*VGHYGKETGSP Trigger: TGGGCTACCCGTTTCCTTCCCATAGTGACCAACGCAACCACTGTTCCTGGCCCCCTCATACACAAACACACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| 3UTR CCA 72 bp | AACGATTTCTGTTCTTGGTCTCTGTACAGTAGGAGATaGGGGTGTGTGTTTGTGTGTGTATGTCTGCTTGTG | + |
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Preference number: 3 (lower is better) Translates to: NDFCSWSLYSRR*GCVFVCVCLLV Trigger: CACAAGCAGACATACACACACAAACACACACCCCCATCTCCTACTGTACAGAGACCAAGAACAGAAATCGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR GCA 90 bp | AACGCCTCTTCTGGGTGCCAGGGTGTCCGTCCTGTGTCCTGGGTCTTGGAGTGGAGGCAGGTGCCGGTCTaGGTGGCTGCCATCTTGTAC | + |
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Preference number: 4 (lower is better) Translates to: NASSGCQGVRPVSWVLEWRQVPV*VAAILY Trigger: GTACAAGATGGCAGCCACGCAGACCGGCACCTGCCT...CCACTCCAAGACCCAGGACACAGGACGGACACCCTGGCACCCAGAAGAGGCGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR GCA 90 bp | ATCGAGCAAGAGAACGCCTCTTCTGGGTGCCAGGGTGTCCGTCCTGTGTCCTGGGGCAGCTCCGGGCTCTaGTCCTGCTTCACCATGATG | + |
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Preference number: 4 (lower is better) Translates to: IEQENASSGCQGVRPVSWGSSGL*SCFTMM Trigger: CATCATGGTGAAGCAGGAGCAGAGCCCGGAGCTGCC...CCAGGACACAGGACGGACACCCTGGCACCCAGAAGAGGCGTTCTCTTGCTCGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR CCA 90 bp | GGCAGGGGTATGAGCTGGATCTGGGTCATCGAGCAAGAGAACGCCTCTTCTGGGGGCACAAGGGGGCTCTaGGGTGCAGAATCCCCACTC | + |
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Preference number: 4 (lower is better) Translates to: GRGMSWIWVIEQENASSGGTRGL*GAESPL Trigger: GAGTGGGGATTCTGCACCCCAGAGCCCCCTTGTGCC...CCCAGAAGAGGCGTTCTCTTGCTCGATGACCCAGATCCAGCTCATACCCCTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR CCA 90 bp | AACGCCTCTTCTGGGTGCCAGGGTGTCCGTCCTGTGTCCTGGGTCTTGGAGTGGTGGGGTGGGAGAAGTTaGGGCTGGTGCCGTTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: NASSGCQGVRPVSWVLEWWGGRS*GWCRCH Trigger: ATGACAACGGCACCAGCCCCAACTTCTCCCACCCCA...CCACTCCAAGACCCAGGACACAGGACGGACACCCTGGCACCCAGAAGAGGCGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR TCA 90 bp | TCTGGGTCATCGAGCAAGAGAACGCCTCTTCTGGGTGCCAGGGTGTCCGTCCTGCAAGAGCAGTGGCCCTaGTGTCCCCTGCAGTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: SGSSSKRTPLLGARVSVLQEQWP*CPLQFV Trigger: CACAAACTGCAGGGGACATCAGGGCCACTGCTCTTG...CAGGACGGACACCCTGGCACCCAGAAGAGGCGTTCTCTTGCTCGATGACCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR TCA 90 bp | GGCAGGGGTATGAGCTGGATCTGGGTCATCGAGCAAGAGAACGCCTCTTCTGGGTCGGCCATCTTCCCATaGGCCTGCCCCATCATCGTA | + |
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Preference number: 4 (lower is better) Translates to: GRGMSWIWVIEQENASSGSAIFP*ACPIIV Trigger: TACGATGATGGGGCAGGCTCATGGGAAGATGGCCGA...CCCAGAAGAGGCGTTCTCTTGCTCGATGACCCAGATCCAGCTCATACCCCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR CCA 90 bp | TCTGGGTCATCGAGCAAGAGAACGCCTCTTCTGGGTGCCAGGGTGTCCGTCCTGGGAGCAGGGTCCTGTTaGCAGTCTCTAGGGTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: SGSSSKRTPLLGARVSVLGAGSC*QSLGFP Trigger: TGGAAACCCTAGAGACTGCCAACAGGACCCTGCTCC...CAGGACGGACACCCTGGCACCCAGAAGAGGCGTTCTCTTGCTCGATGACCCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR CCA 90 bp | TCTGGGTCATCGAGCAAGAGAACGCCTCTTCTGGGTGCCAGGGTGTCCGTCCTGCTGGTGACCAGAGTCTaGAGTTTCTGCAGCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SGSSSKRTPLLGARVSVLLVTRV*SFCSCW Trigger: CCAGCAGCTGCAGAAACTCCAGACTCTGGTCACCAG...CAGGACGGACACCCTGGCACCCAGAAGAGGCGTTCTCTTGCTCGATGACCCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR CCA 90 bp | GGCAGGGGTATGAGCTGGATCTGGGTCATCGAGCAAGAGAACGCCTCTTCTGGGAACCACTCCTTGGGGTaGGAGAAGTTGGGGCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: GRGMSWIWVIEQENASSGNHSLG*EKLGLV Trigger: CACCAGCCCCAACTTCTCCCACCCCAAGGAGTGGTT...CCCAGAAGAGGCGTTCTCTTGCTCGATGACCCAGATCCAGCTCATACCCCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR TCA 90 bp | GGCAGGGGTATGAGCTGGATCTGGGTCATCGAGCAAGAGAACGCCTCTTCTGGGTTGATCACTGGCAGCTaGGTCATTTCTCCTGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GRGMSWIWVIEQENASSGLITGS*VISPGA Trigger: GGCCCCAGGAGAAATGACTCAGCTGCCAGTGATCAA...CCCAGAAGAGGCGTTCTCTTGCTCGATGACCCAGATCCAGCTCATACCCCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR TCA 90 bp | GTGTCCCTCTTCCCCAGGCCAAGGGGTAGCAAAGCCCGCACTAACTTCATAAAAGTCCCCTGCAGTTTGTaGGGGGCAGTGAGGAGCGGA | + |
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Preference number: 4 (lower is better) Translates to: VSLFPRPRGSKARTNFIKVPCSL*GAVRSG Trigger: TCCGCTCCTCACTGCCCCTCACAAACTGCAGGGGAC...TTTTATGAAGTTAGTGCGGGCTTTGCTACCCCTTGGCCTGGGGAAGAGGGACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR GCA 90 bp | TCTGGGTCATCGAGCAAGAGAACGCCTCTTCTGGGTGCCAGGGTGTCCGTCCTGAGGCATCTGACTGGCTaGATAGACACTGTCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SGSSSKRTPLLGARVSVLRHLTG*IDTVSC Trigger: GCAGCTGACAGTGTCTATGCAGCCAGTCAGATGCCT...CAGGACGGACACCCTGGCACCCAGAAGAGGCGTTCTCTTGCTCGATGACCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR CCA 90 bp | GTGTCCCTCTTCCCCAGGCCAAGGGGTAGCAAAGCCCGCACTAACTTCATAAAACTCAGCCTGGATGCCTaGAGCGGGGGAGTCCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: VSLFPRPRGSKARTNFIKLSLDA*SGGVQF Trigger: GAACTGGACTCCCCCGCTCCAGGCATCCAGGCTGAG...TTTTATGAAGTTAGTGCGGGCTTTGCTACCCCTTGGCCTGGGGAAGAGGGACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR CCA 90 bp | GTATGTCTGCTTGTGTGTTTGTGTATGAGGGGGCCAGGAACAGTGGTTGCGTTGGCGGAGAGGTGGAAATaGCCGTGGAGGAGCGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: VCLLVCLCMRGPGTVVALAERWK*PWRSGP Trigger: TGGCCCGCTCCTCCACGGCCATTTCCACCTCTCCGC...CAACGCAACCACTGTTCCTGGCCCCCTCATACACAAACACACAAGCAGACATAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR CCA 90 bp | ATCGAGCAAGAGAACGCCTCTTCTGGGTGCCAGGGTGTCCGTCCTGTGTCCTGGGGGAAGGCATCTGACTaGCTGCATAGACACTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: IEQENASSGCQGVRPVSWGKASD*LHRHCQ Trigger: CTGACAGTGTCTATGCAGCCAGTCAGATGCCTTCCC...CCAGGACACAGGACGGACACCCTGGCACCCAGAAGAGGCGTTCTCTTGCTCGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR CCA 90 bp | GTTGGTCACTATGGGAAGGAAACGGGTAGCCCAGTGAGTGGTTTATCGGAGGAGAGAGAGCGGGGACTCTaGGAGCCGTCACTGTCACTG | + |
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Preference number: 4 (lower is better) Translates to: VGHYGKETGSPVSGLSEERERGL*EPSLSL Trigger: CAGTGACAGTGACGGCTCCCAGAGTCCCCGCTCTCT...CTCCTCCGATAAACCACTCACTGGGCTACCCGTTTCCTTCCCATAGTGACCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR GCA 90 bp | GTGTCCCTCTTCCCCAGGCCAAGGGGTAGCAAAGCCCGCACTAACTTCATAAAACATACTCCTTCTTCTTaGGGCGGCTCTCCTGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: VSLFPRPRGSKARTNFIKHTPSS*GGSPGQ Trigger: CTGCCCAGGAGAGCCGCCGCAAGAAGAAGGAGTATG...TTTTATGAAGTTAGTGCGGGCTTTGCTACCCCTTGGCCTGGGGAAGAGGGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR CCA 90 bp | GTGTCCCTCTTCCCCAGGCCAAGGGGTAGCAAAGCCCGCACTAACTTCATAAAACTGAGTCATTTCTCCTaGGGCCTGGTGAGGGATGGG | + |
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Preference number: 4 (lower is better) Translates to: VSLFPRPRGSKARTNFIKLSHFS*GLVRDG Trigger: CCCATCCCTCACCAGGCCCCAGGAGAAATGACTCAG...TTTTATGAAGTTAGTGCGGGCTTTGCTACCCCTTGGCCTGGGGAAGAGGGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR CCA 90 bp | GTATGTCTGCTTGTGTGTTTGTGTATGAGGGGGCCAGGAACAGTGGTTGCGTTGCACTGCCATGGCTGCTaGGGGGTGTTGGAGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: VCLLVCLCMRGPGTVVALHCHGC*GVLEAS Trigger: AGATGCCTCCAACACCCCCCAGCAGCCATGGCAGTG...CAACGCAACCACTGTTCCTGGCCCCCTCATACACAAACACACAAGCAGACATAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR CCA 90 bp | GCTTGTGTGTTTGTGTATGAGGGGGCCAGGAACAGTGGTTGCGTTGGTCACTATAGGTGCCGGTCTGCGTaGCTGCCATCTTGTACGGTC | + |
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Preference number: 4 (lower is better) Translates to: ACVFVYEGARNSGCVGHYRCRSA*LPSCTV Trigger: GACCGTACAAGATGGCAGCCACGCAGACCGGCACCT...ATAGTGACCAACGCAACCACTGTTCCTGGCCCCCTCATACACAAACACACAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR CCA 90 bp | AGGAACAGTGGTTGCGTTGGTCACTATGGGAAGGAAACGGGTAGCCCAGTGAGTCCCAGATCCCTGTCATaGAACCACTCCTTGGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: RNSGCVGHYGKETGSPVSPRSLS*NHSLGW Trigger: CCACCCCAAGGAGTGGTTCCATGACAGGGATCTGGG...ACTCACTGGGCTACCCGTTTCCTTCCCATAGTGACCAACGCAACCACTGTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR TCA 90 bp | GCTTGTGTGTTTGTGTATGAGGGGGCCAGGAACAGTGGTTGCGTTGGTCACTATTGGTGTCCTCCATCTTaGCAGGCACAAGGGGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: ACVFVYEGARNSGCVGHYWCPPS*QAQGGS Trigger: AGAGCCCCCTTGTGCCTGTCAAGATGGAGGACACCA...ATAGTGACCAACGCAACCACTGTTCCTGGCCCCCTCATACACAAACACACAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR TCA 90 bp | TGTATGAGGGGGCCAGGAACAGTGGTTGCGTTGGTCACTATGGGAAGGAAACGGGCTCCTGCTTCACCATaGTGGAGCACAGCTTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: CMRGPGTVVALVTMGRKRAPASP*WSTACF Trigger: GAAACAAGCTGTGCTCCATCATGGTGAAGCAGGAGC...CCGTTTCCTTCCCATAGTGACCAACGCAACCACTGTTCCTGGCCCCCTCATACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR GCA 90 bp | AGGAACAGTGGTTGCGTTGGTCACTATGGGAAGGAAACGGGTAGCCCAGTGAGTAGAGTCTGGAGTTTCTaGAGCTGCTGGAGCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: RNSGCVGHYGKETGSPVSRVWSF*SCWSRV Trigger: GACCCTGCTCCAGCAGCTGCAGAAACTCCAGACTCT...ACTCACTGGGCTACCCGTTTCCTTCCCATAGTGACCAACGCAACCACTGTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR GCA 90 bp | GTATGTCTGCTTGTGTGTTTGTGTATGAGGGGGCCAGGAACAGTGGTTGCGTTGAACGAAGCACAAGGCTaGCACCATGAGGCAGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: VCLLVCLCMRGPGTVVALNEAQG*HHEAGA Trigger: GGCACCTGCCTCATGGTGGCAGCCTTGTGCTTCGTT...CAACGCAACCACTGTTCCTGGCCCCCTCATACACAAACACACAAGCAGACATAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR TCA 90 bp | GTGTCCCTCTTCCCCAGGCCAAGGGGTAGCAAAGCCCGCACTAACTTCATAAAACCGTGTTCCACATCTTaGGTGGTGTCCTCCATCTTG | + |
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Preference number: 4 (lower is better) Translates to: VSLFPRPRGSKARTNFIKPCSTS*VVSSIL Trigger: CAAGATGGAGGACACCACTCAAGATGTGGAACACGG...TTTTATGAAGTTAGTGCGGGCTTTGCTACCCCTTGGCCTGGGGAAGAGGGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR GCA 90 bp | AGGAACAGTGGTTGCGTTGGTCACTATGGGAAGGAAACGGGTAGCCCAGTGAGTCATTTCTGGGGGCTCTaGTTTGATCACTGGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: RNSGCVGHYGKETGSPVSHFWGL*FDHWQL Trigger: CAGCTGCCAGTGATCAAAGCAGAGCCCCCAGAAATG...ACTCACTGGGCTACCCGTTTCCTTCCCATAGTGACCAACGCAACCACTGTTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR CCA 90 bp | AACGATTTCTGTTCTTGGTCTCTGTACAGTAGGAGATGGGGGTGTGTGTTTGTGTGTCGGAGGTGGTCCTaGGGCCTCTGCTCTGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: NDFCSWSLYSRRWGCVFVCRRWS*GLCSAG Trigger: TCCAGCAGAGCAGAGGCCCCAGGACCACCTCCGACA...CACAAACACACACCCCCATCTCCTACTGTACAGAGACCAAGAACAGAAATCGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR CCA 90 bp | TGTATGAGGGGGCCAGGAACAGTGGTTGCGTTGGTCACTATGGGAAGGAAACGGCTCTCAAGTACTTGGTaGTCTCATGGATGCTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: CMRGPGTVVALVTMGRKRLSSTW*SHGCCL Trigger: CAGACAGCATCCATGAGACCACCAAGTACTTGAGAG...CCGTTTCCTTCCCATAGTGACCAACGCAACCACTGTTCCTGGCCCCCTCATACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR CCA 90 bp | AGGAACAGTGGTTGCGTTGGTCACTATGGGAAGGAAACGGGTAGCCCAGTGAGTGTCATCAGTGTCCTCTaGCCAGGTCTCTCTCAAGTA | + |
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Preference number: 4 (lower is better) Translates to: RNSGCVGHYGKETGSPVSVISVL*PGLSQV Trigger: TACTTGAGAGAGACCTGGCCAGAGGACACTGATGAC...ACTCACTGGGCTACCCGTTTCCTTCCCATAGTGACCAACGCAACCACTGTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR TCA 90 bp | GGTATGAGCTGGATCTGGGTCATCGAGCAAGAGAACGCCTCTTCTGGGTGCCAGCAGCTCATTGTTCTCTaGTGTATATGTCTCCACCTT | + |
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Preference number: 4 (lower is better) Translates to: GMSWIWVIEQENASSGCQQLIVL*CICLHL Trigger: AAGGTGGAGACATATACATCAGAGAACAATGAGCTG...CTGGCACCCAGAAGAGGCGTTCTCTTGCTCGATGACCCAGATCCAGCTCATACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR CCA 90 bp | AACGATTTCTGTTCTTGGTCTCTGTACAGTAGGAGATGGGGGTGTGTGTTTGTGCATGGAACCACTCCTTaGGGTGGGAGAAGTTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: NDFCSWSLYSRRWGCVFVHGTTP*GGRSWG Trigger: GCCCCAACTTCTCCCACCCCAAGGAGTGGTTCCATG...CACAAACACACACCCCCATCTCCTACTGTACAGAGACCAAGAACAGAAATCGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| 3UTR CAA 72 bp | GGGTGTGTGTTTGTGTGTGTATGTCTGCTTGTGTGTTaGTGTATGAGGGGGCCAGGAACAGTGGTTGCGTTG | + |
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Preference number: 4 (lower is better) Translates to: GCVFVCVCLLVC*CMRGPGTVVAL Trigger: CAACGCAACCACTGTTCCTGGCCCCCTCATACACAAACACACAAGCAGACATACACACACAAACACACACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR GCA 90 bp | TTACAAACGATTTCTGTTCTTGGTCTCTGTACAGTAGGAGATGGGGGTGTGTGTTCCGGGCTCTGCTCCTaGTTCACCATGATGGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: LQTISVLGLCTVGDGGVCSGLCS*FTMMEH Trigger: GTGCTCCATCATGGTGAAGCAGGAGCAGAGCCCGGA...ACACACACCCCCATCTCCTACTGTACAGAGACCAAGAACAGAAATCGTTTGTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR CCA 90 bp | GGGAGAGGTGACGGGAGGGAGATTTGTAAAATACAATATCTTAGGGGATTGACACCAAGTCCAGGAAGCTaGATCCCGGGAACAGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: GRGDGREICKIQYLRGLTPSPGS*IPGTAC Trigger: ACAGGCTGTTCCCGGGATCCAGCTTCCTGGACTTGG...TGTCAATCCCCTAAGATATTGTATTTTACAAATCTCCCTCCCGTCACCTCTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR CCA 90 bp | GTATGTCTGCTTGTGTGTTTGTGTATGAGGGGGCCAGGAACAGTGGTTGCGTTGGTCACTTTGAGAAACTaGCTCATTTCTGGGGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: VCLLVCLCMRGPGTVVALVTLRN*LISGGS Trigger: AGAGCCCCCAGAAATGAGCCAGTTTCTCAAAGTGAC...CAACGCAACCACTGTTCCTGGCCCCCTCATACACAAACACACAAGCAGACATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR CCA 90 bp | AACGATTTCTGTTCTTGGTCTCTGTACAGTAGGAGATGGGGGTGTGTGTTTGTGTTGCGGCGGCTCTCCTaGGCAGAAATCTTGTTCTTA | + |
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Preference number: 4 (lower is better) Translates to: NDFCSWSLYSRRWGCVFVLRRLS*AEILFL Trigger: TAAGAACAAGATTTCTGCCCAGGAGAGCCGCCGCAA...CACAAACACACACCCCCATCTCCTACTGTACAGAGACCAAGAACAGAAATCGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR TCA 90 bp | GGGAGAGGTGACGGGAGGGAGATTTGTAAAATACAATATCTTAGGGGATTGACACCTCTGGTGTCACTTTaGGAAACTGGCTCATTTCTG | + |
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Preference number: 4 (lower is better) Translates to: GRGDGREICKIQYLRGLTPLVSL*ETGSFL Trigger: CAGAAATGAGCCAGTTTCTCAAAGTGACACCAGAGG...TGTCAATCCCCTAAGATATTGTATTTTACAAATCTCCCTCCCGTCACCTCTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR CCA 90 bp | TTACAAACGATTTCTGTTCTTGGTCTCTGTACAGTAGGAGATGGGGGTGTGTGTAAACTGGCTCATTTCTaGGGGCTCTGCTTTGATCAC | + |
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Preference number: 4 (lower is better) Translates to: LQTISVLGLCTVGDGGVCKLAHF*GLCFDH Trigger: GTGATCAAAGCAGAGCCCCCAGAAATGAGCCAGTTT...ACACACACCCCCATCTCCTACTGTACAGAGACCAAGAACAGAAATCGTTTGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS CCA 90 bp | GTGGTCTCATGGATGCTGTCTGCACGGTCATGTCGGAGGTGGTCCTaGGGCCTCTGCTCTGCTGGACCCCCGGGTTTGAGCTCCCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: VVSWMLSARSCRRWS*GLCSAGPPGLSSQP Trigger: AGGCTGGGAGCTCAAACCCGGGGGTCCAGCAGAGCAGAGGCCCCAGGACCACCTCCGACATGACCGTGCAGACAGCATCCATGAGACCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS TCA 90 bp | TCAAGAGCAGTGGCCCTGATGTCCCCTGCAGTTTGTGAGGGGCAGTaGGGAGCGGAGAGGTGGAAATGGCCGTGGAGGAGCGGGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: SRAVALMSPAVCEGQ*GAERWKWPWRSGPW Trigger: CCATGGCCCGCTCCTCCACGGCCATTTCCACCTCTCCGCTCCTCACTGCCCCTCACAAACTGCAGGGGACATCAGGGCCACTGCTCTTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS TCA 90 bp | CCAGGGGATCTACAGGCAGCTCCGGGCTCTGCTCCTGCTTCACCATaGTGGAGCACAGCTTGTTTCCCAGGGCCCACGCTCCGTGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PGDLQAAPGSAPASP*WSTACFPGPTLRVP Trigger: TGGAACACGGAGCGTGGGCCCTGGGAAACAAGCTGTGCTCCATCATGGTGAAGCAGGAGCAGAGCCCGGAGCTGCCTGTAGATCCCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS CCA 90 bp | GAGAGCGGGGACTCTGGGAGCCGTCACTGTCACTGCCATGGCTGCTaGGGGGTGTTGGAGGCATCTGTACGAGGTCCTCTGGTGTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: ESGDSGSRHCHCHGC*GVLEASVRGPLVSL Trigger: AAGTGACACCAGAGGACCTCGTACAGATGCCTCCAACACCCCCCAGCAGCCATGGCAGTGACAGTGACGGCTCCCAGAGTCCCCGCTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS CCA 90 bp | TACTTGGTGGTCTCATGGATGCTGTCTGCACGGTCATGTCGGAGGTaGTCCTGGGGCCTCTGCTCTGCTGGACCCCCGGGTTTGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YLVVSWMLSARSCRR*SWGLCSAGPPGLSS Trigger: GGAGCTCAAACCCGGGGGTCCAGCAGAGCAGAGGCCCCAGGACCACCTCCGACATGACCGTGCAGACAGCATCCATGAGACCACCAAGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR CAA 90 bp | AACGCCTCTTCTGGGTGCCAGGGTGTCCGTCCTGTGTCCTGGGTCTTGGAGTGGGTGGTGTCCTCCATCTaGACAGGCACAAGGGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: NASSGCQGVRPVSWVLEWVVSSI*TGTRGL Trigger: GAGCCCCCTTGTGCCTGTCAAGATGGAGGACACCAC...CCACTCCAAGACCCAGGACACAGGACGGACACCCTGGCACCCAGAAGAGGCGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR CAA 90 bp | CTGGGTCATCGAGCAAGAGAACGCCTCTTCTGGGTGCCAGGGTGTCCGTCCTGTGCCTTCTCCTCAGCCTaGGTGAGGGGGAGCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LGHRARERLFWVPGCPSCAFSSA*VRGSLV Trigger: CACCAAGCTCCCCCTCACCAAGGCTGAGGAGAAGGC...ACAGGACGGACACCCTGGCACCCAGAAGAGGCGTTCTCTTGCTCGATGACCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS CCA 90 bp | GGCCCAGATCCCTGTCATGGAACCACTCCTTGGGGTGGGAGAAGTTaGGGCTGGTGCCGTTGTCATCAGTGTCCTCTGGCCAGGTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GPDPCHGTTPWGGRS*GWCRCHQCPLARSL Trigger: GAGAGACCTGGCCAGAGGACACTGATGACAACGGCACCAGCCCCAACTTCTCCCACCCCAAGGAGTGGTTCCATGACAGGGATCTGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS TCA 90 bp | GAGCACAGCTTGTTTCCCAGGGCCCACGCTCCGTGTTCCACATCTTaGGTGGTGTCCTCCATCTTGACAGGCACAAGGGGGCTCTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: EHSLFPRAHAPCSTS*VVSSILTGTRGLWG Trigger: ACCCCAGAGCCCCCTTGTGCCTGTCAAGATGGAGGACACCACTCAAGATGTGGAACACGGAGCGTGGGCCCTGGGAAACAAGCTGTGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS TCA 90 bp | CGCGATCAAGGTCCGCTTCTCCTCTTCTGTCAAGAGCAGTGGCCCTaGTGTCCCCTGCAGTTTGTGAGGGGCAGTGAGGAGCGGAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RDQGPLLLFCQEQWP*CPLQFVRGSEERRG Trigger: ACCTCTCCGCTCCTCACTGCCCCTCACAAACTGCAGGGGACATCAGGGCCACTGCTCTTGACAGAAGAGGAGAAGCGGACCTTGATCGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS GCA 90 bp | TGGCCAGGTCTCTCTCAAGTACTTGGTGGTCTCATGGATGCTGTCTaGACGGTCATGTCGGAGGTGGTCCTGGGGCCTCTGCTCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: WPGLSQVLGGLMDAV*TVMSEVVLGPLLCW Trigger: CCAGCAGAGCAGAGGCCCCAGGACCACCTCCGACATGACCGTGCAGACAGCATCCATGAGACCACCAAGTACTTGAGAGAGACCTGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR CAA 90 bp | CATCGAGCAAGAGAACGCCTCTTCTGGGTGCCAGGGTGTCCGTCCTGTGTCCTGTCATGGAACCACTCCTaGGGGTGGGAGAAGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HRARERLFWVPGCPSCVLSWNHS*GWEKLG Trigger: CCCCAACTTCTCCCACCCCAAGGAGTGGTTCCATGA...CAGGACACAGGACGGACACCCTGGCACCCAGAAGAGGCGTTCTCTTGCTCGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
||
| CDS-3UTR CAA 90 bp | GGCAGGGGTATGAGCTGGATCTGGGTCATCGAGCAAGAGAACGCCTCTTCTGGGATGATGGAGCACAGCTaGTTTCCCAGGGCCCACGCT | + |
|
Preference number: 5 (lower is better) Translates to: GRGMSWIWVIEQENASSGMMEHS*FPRAHA Trigger: AGCGTGGGCCCTGGGAAACAAGCTGTGCTCCATCAT...CCCAGAAGAGGCGTTCTCTTGCTCGATGACCCAGATCCAGCTCATACCCCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS GCA 90 bp | CCCTGTCATGGAACCACTCCTTGGGGTGGGAGAAGTTGGGGCTGGTaGCGTTGTCATCAGTGTCCTCTGGCCAGGTCTCTCTCAAGTACT | + |
|
Preference number: 5 (lower is better) Translates to: PCHGTTPWGGRSWGW*RCHQCPLARSLSST Trigger: AGTACTTGAGAGAGACCTGGCCAGAGGACACTGATGACAACGGCACCAGCCCCAACTTCTCCCACCCCAAGGAGTGGTTCCATGACAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS CCA 90 bp | GATCCCTGTCATGGAACCACTCCTTGGGGTGGGAGAAGTTGGGGCTaGTGCCGTTGTCATCAGTGTCCTCTGGCCAGGTCTCTCTCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: DPCHGTTPWGGRSWG*CRCHQCPLARSLSS Trigger: ACTTGAGAGAGACCTGGCCAGAGGACACTGATGACAACGGCACCAGCCCCAACTTCTCCCACCCCAAGGAGTGGTTCCATGACAGGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
||
| CDS-3UTR CAA 90 bp | TGTATGAGGGGGCCAGGAACAGTGGTTGCGTTGGTCACTATGGGAAGGAAACGGACATACTCCTTCTTCTaGCGGCGGCTCTCCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CMRGPGTVVALVTMGRKRTYSFF*RRLSWA Trigger: TGCCCAGGAGAGCCGCCGCAAGAAGAAGGAGTATGT...CCGTTTCCTTCCCATAGTGACCAACGCAACCACTGTTCCTGGCCCCCTCATACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR CAA 90 bp | GGTATGAGCTGGATCTGGGTCATCGAGCAAGAGAACGCCTCTTCTGGGTGCCAGTGCGTGGCTGCCATCTaGTACGGTCTGGAGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GMSWIWVIEQENASSGCQCVAAI*YGLEIL Trigger: CAAGATCTCCAGACCGTACAAGATGGCAGCCACGCA...CTGGCACCCAGAAGAGGCGTTCTCTTGCTCGATGACCCAGATCCAGCTCATACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR CAA 90 bp | ATCGAGCAAGAGAACGCCTCTTCTGGGTGCCAGGGTGTCCGTCCTGTGTCCTGGGTCTCTCTCAAGTACTaGGTGGTCTCATGGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IEQENASSGCQGVRPVSWVSLKY*VVSWML Trigger: CAGCATCCATGAGACCACCAAGTACTTGAGAGAGAC...CCAGGACACAGGACGGACACCCTGGCACCCAGAAGAGGCGTTCTCTTGCTCGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR CAA 90 bp | AGGAACAGTGGTTGCGTTGGTCACTATGGGAAGGAAACGGGTAGCCCAGTGAGTTTGGGGTGGGAGAAGTaGGGGCTGGTGCCGTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RNSGCVGHYGKETGSPVSLGWEK*GLVPLS Trigger: TGACAACGGCACCAGCCCCAACTTCTCCCACCCCAA...ACTCACTGGGCTACCCGTTTCCTTCCCATAGTGACCAACGCAACCACTGTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS GCA 90 bp | GGTCTGGAGATCTTGCTGGTGACCAGAGTCTGGAGTTTCTGCAGCTaGTGGAGCAGGGTCCTGTTGGCAGTCTCTAGGGTTTCCACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GLEILLVTRVWSFCS*WSRVLLAVSRVSTF Trigger: GAAAGTGGAAACCCTAGAGACTGCCAACAGGACCCTGCTCCAGCAGCTGCAGAAACTCCAGACTCTGGTCACCAGCAAGATCTCCAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS GCA 90 bp | TTGTACGGTCTGGAGATCTTGCTGGTGACCAGAGTCTGGAGTTTCTaGAGCTGCTGGAGCAGGGTCCTGTTGGCAGTCTCTAGGGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LYGLEILLVTRVWSF*SCWSRVLLAVSRVS Trigger: GGAAACCCTAGAGACTGCCAACAGGACCCTGCTCCAGCAGCTGCAGAAACTCCAGACTCTGGTCACCAGCAAGATCTCCAGACCGTACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS TCA 90 bp | TGCATAGACACTGTCAGCTGCGATAGGGTCTTCTTTCACAGTCATTaGGCCGGAAGAGAATGCAGGAAGGCAGGGCACAAGGGAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CIDTVSCDRVFFHSH*AGRECRKAGHKGAQ Trigger: CTGGGCTCCCTTGTGCCCTGCCTTCCTGCATTCTCTTCCGGCTCAATGACTGTGAAAGAAGACCCTATCGCAGCTGACAGTGTCTATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS CCA 90 bp | CTGGAGATCTTGCTGGTGACCAGAGTCTGGAGTTTCTGCAGCTGCTaGAGCAGGGTCCTGTTGGCAGTCTCTAGGGTTTCCACTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LEILLVTRVWSFCSC*SRVLLAVSRVSTFF Trigger: GAAGAAAGTGGAAACCCTAGAGACTGCCAACAGGACCCTGCTCCAGCAGCTGCAGAAACTCCAGACTCTGGTCACCAGCAAGATCTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR CAA 90 bp | GCTTGTGTGTTTGTGTATGAGGGGGCCAGGAACAGTGGTTGCGTTGGTCACTATTACGGTCTGGAGATCTaGCTGGTGACCAGAGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ACVFVYEGARNSGCVGHYYGLEI*LVTRVW Trigger: CCAGACTCTGGTCACCAGCAAGATCTCCAGACCGTA...ATAGTGACCAACGCAACCACTGTTCCTGGCCCCCTCATACACAAACACACAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS CCA 90 bp | CTGTACGAGGTCCTCTGGTGTCACTTTGAGAAACTGGCTCATTTCTaGGGGCTCTGCTTTGATCACTGGCAGCTGAGTCATTTCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LYEVLWCHFEKLAHF*GLCFDHWQLSHFSW Trigger: CCAGGAGAAATGACTCAGCTGCCAGTGATCAAAGCAGAGCCCCCAGAAATGAGCCAGTTTCTCAAAGTGACACCAGAGGACCTCGTACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR CAA 90 bp | GGCAGGGGTATGAGCTGGATCTGGGTCATCGAGCAAGAGAACGCCTCTTCTGGGTCCTGGGCAGAAATCTaGTTCTTAATTTTCCTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: GRGMSWIWVIEQENASSGSWAEI*FLIFLR Trigger: ACGCAGGAAAATTAAGAACAAGATTTCTGCCCAGGA...CCCAGAAGAGGCGTTCTCTTGCTCGATGACCCAGATCCAGCTCATACCCCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS TCA 90 bp | GCAGAGCACTCTTCTCGTCCAGCACAGGGTCATCAAAGAAACTGCTaGACAGGTCATTGGAGAAGTCCTCCATGTTCTCCACAAAGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: AEHSSRPAQGHQRNC*TGHWRSPPCSPQSG Trigger: ACCACTTTGTGGAGAACATGGAGGACTTCTCCAATGACCTGTTCAGCAGTTTCTTTGATGACCCTGTGCTGGACGAGAAGAGTGCTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS-3UTR CAA 90 bp | AACGATTTCTGTTCTTGGTCTCTGTACAGTAGGAGATGGGGGTGTGTGTTTGTGCTGCTGAACAGGTCATaGGAGAAGTCCTCCATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: NDFCSWSLYSRRWGCVFVLLNRS*EKSSMF Trigger: GAACATGGAGGACTTCTCCAATGACCTGTTCAGCAG...CACAAACACACACCCCCATCTCCTACTGTACAGAGACCAAGAACAGAAATCGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS CCA 72 bp | GTCATGTCGGAGGTGGTCCTGGGGCCTCTGCTCTGCTaGACCCCCGGGTTTGAGCTCCCAGCCTTCTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VMSEVVLGPLLC*TPGFELPAFWG Trigger: CCCCCAGAAGGCTGGGAGCTCAAACCCGGGGGTCCAGCAGAGCAGAGGCCCCAGGACCACCTCCGACATGAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS GCA 72 bp | ACGGTCATGTCGGAGGTGGTCCTGGGGCCTCTGCTCTaGTGGACCCCCGGGTTTGAGCTCCCAGCCTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TVMSEVVLGPLL*WTPGFELPAFW Trigger: CCAGAAGGCTGGGAGCTCAAACCCGGGGGTCCAGCAGAGCAGAGGCCCCAGGACCACCTCCGACATGACCGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS GCA 72 bp | TCTGCACGGTCATGTCGGAGGTGGTCCTGGGGCCTCTaGTCTGCTGGACCCCCGGGTTTGAGCTCCCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SARSCRRWSWGL*SAGPPGLSSQP Trigger: AGGCTGGGAGCTCAAACCCGGGGGTCCAGCAGAGCAGAGGCCCCAGGACCACCTCCGACATGACCGTGCAGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS CCA 72 bp | TGGATGCTGTCTGCACGGTCATGTCGGAGGTGGTCCTaGGGCCTCTGCTCTGCTGGACCCCCGGGTTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: WMLSARSCRRWS*GLCSAGPPGLS Trigger: GCTCAAACCCGGGGGTCCAGCAGAGCAGAGGCCCCAGGACCACCTCCGACATGACCGTGCAGACAGCATCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS CCA 72 bp | GTCTCATGGATGCTGTCTGCACGGTCATGTCGGAGGTaGTCCTGGGGCCTCTGCTCTGCTGGACCCCCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: VSWMLSARSCRR*SWGLCSAGPPG Trigger: ACCCGGGGGTCCAGCAGAGCAGAGGCCCCAGGACCACCTCCGACATGACCGTGCAGACAGCATCCATGAGAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS TCA 72 bp | GTGGCCCTGATGTCCCCTGCAGTTTGTGAGGGGCAGTaGGGAGCGGAGAGGTGGAAATGGCCGTGGAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: VALMSPAVCEGQ*GAERWKWPWRS Trigger: GCTCCTCCACGGCCATTTCCACCTCTCCGCTCCTCACTGCCCCTCACAAACTGCAGGGGACATCAGGGCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS TCA 72 bp | CTACAGGCAGCTCCGGGCTCTGCTCCTGCTTCACCATaGTGGAGCACAGCTTGTTTCCCAGGGCCCACGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LQAAPGSAPASP*WSTACFPGPTL Trigger: GAGCGTGGGCCCTGGGAAACAAGCTGTGCTCCATCATGGTGAAGCAGGAGCAGAGCCCGGAGCTGCCTGTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS TCA 72 bp | AGCCCAGCACCAGAACGAAGCACAAGGCTGCCACCATaGGGCAGGTGCCGGTCTGCGTGGCTGCCATCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SPAPERSTRLPP*GRCRSAWLPSC Trigger: ACAAGATGGCAGCCACGCAGACCGGCACCTGCCTCATGGTGGCAGCCTTGTGCTTCGTTCTGGTGCTGGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS CCA 72 bp | GACTCTGGGAGCCGTCACTGTCACTGCCATGGCTGCTaGGGGGTGTTGGAGGCATCTGTACGAGGTCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: DSGSRHCHCHGC*GVLEASVRGPL Trigger: CAGAGGACCTCGTACAGATGCCTCCAACACCCCCCAGCAGCCATGGCAGTGACAGTGACGGCTCCCAGAGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS CAA 90 bp | GGAGCACAGCTTGTTTCCCAGGGCCCACGCTCCGTGTTCCACATCTaGAGTGGTGTCCTCCATCTTGACAGGCACAAGGGGGCTCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GAQLVSQGPRSVFHI*SGVLHLDRHKGALG Trigger: CCCCAGAGCCCCCTTGTGCCTGTCAAGATGGAGGACACCACTCAAGATGTGGAACACGGAGCGTGGGCCCTGGGAAACAAGCTGTGCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS CAA 90 bp | GGGCCCAGATCCCTGTCATGGAACCACTCCTTGGGGTGGGAGAAGTaGGGGCTGGTGCCGTTGTCATCAGTGTCCTCTGGCCAGGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GPRSLSWNHSLGWEK*GLVPLSSVSSGQVS Trigger: AGAGACCTGGCCAGAGGACACTGATGACAACGGCACCAGCCCCAACTTCTCCCACCCCAAGGAGTGGTTCCATGACAGGGATCTGGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS CCA 72 bp | CCCTGTCATGGAACCACTCCTTGGGGTGGGAGAAGTTaGGGCTGGTGCCGTTGTCATCAGTGTCCTCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PCHGTTPWGGRS*GWCRCHQCPLA Trigger: GGCCAGAGGACACTGATGACAACGGCACCAGCCCCAACTTCTCCCACCCCAAGGAGTGGTTCCATGACAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS TCA 72 bp | GGTCCGCTTCTCCTCTTCTGTCAAGAGCAGTGGCCCTaGTGTCCCCTGCAGTTTGTGAGGGGCAGTGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GPLLLFCQEQWP*CPLQFVRGSEE Trigger: CTCCTCACTGCCCCTCACAAACTGCAGGGGACATCAGGGCCACTGCTCTTGACAGAAGAGGAGAAGCGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS GCA 72 bp | GAGGCAGCCAGGGGATCTACAGGCAGCTCCGGGCTCTaGTCCTGCTTCACCATGATGGAGCACAGCTTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: EAARGSTGSSGL*SCFTMMEHSLF Trigger: AAACAAGCTGTGCTCCATCATGGTGAAGCAGGAGCAGAGCCCGGAGCTGCCTGTAGATCCCCTGGCTGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS CCA 72 bp | CATGGAACCACTCCTTGGGGTGGGAGAAGTTGGGGCTaGTGCCGTTGTCATCAGTGTCCTCTGGCCAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: HGTTPWGGRSWG*CRCHQCPLARS Trigger: AGACCTGGCCAGAGGACACTGATGACAACGGCACCAGCCCCAACTTCTCCCACCCCAAGGAGTGGTTCCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS CAA 72 bp | GGGCTCTGCTCCTGCTTCACCATGATGGAGCACAGCTaGTTTCCCAGGGCCCACGCTCCGTGTTCCACATCT | + |
|
Preference number: 6 (lower is better) Translates to: GLCSCFTMMEHS*FPRAHAPCSTS Trigger: AGATGTGGAACACGGAGCGTGGGCCCTGGGAAACAAGCTGTGCTCCATCATGGTGAAGCAGGAGCAGAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
||
| CDS CAA 72 bp | CACTCCTTGGGGTGGGAGAAGTTGGGGCTGGTGCCGTaGTCATCAGTGTCCTCTGGCCAGGTCTCTCTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: HSLGWEKLGLVP*SSVSSGQVSLK Trigger: CTTGAGAGAGACCTGGCCAGAGGACACTGATGACAACGGCACCAGCCCCAACTTCTCCCACCCCAAGGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
||
| CDS CAA 72 bp | TCCCTGTCATGGAACCACTCCTTGGGGTGGGAGAAGTaGGGGCTGGTGCCGTTGTCATCAGTGTCCTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SLSWNHSLGWEK*GLVPLSSVSSG Trigger: GCCAGAGGACACTGATGACAACGGCACCAGCCCCAACTTCTCCCACCCCAAGGAGTGGTTCCATGACAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
||
| CDS TCA 72 bp | CTCCGTGTTCCACATCTTGAGTGGTGTCCTCCATCTTaGCAGGCACAAGGGGGCTCTGGGGTGCAGAATCCC | + |
|
Preference number: 6 (lower is better) Translates to: LRVPHLEWCPPS*QAQGGSGVQNP Trigger: GGGATTCTGCACCCCAGAGCCCCCTTGTGCCTGTCAAGATGGAGGACACCACTCAAGATGTGGAACACGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
||
| CDS TCA 72 bp | TTGTTTCCCAGGGCCCACGCTCCGTGTTCCACATCTTaGGTGGTGTCCTCCATCTTGACAGGCACAAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LFPRAHAPCSTS*VVSSILTGTRG Trigger: CCCCCTTGTGCCTGTCAAGATGGAGGACACCACTCAAGATGTGGAACACGGAGCGTGGGCCCTGGGAAACAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
||
| CDS GCA 72 bp | CTCTCTCAAGTACTTGGTGGTCTCATGGATGCTGTCTaGACGGTCATGTCGGAGGTGGTCCTGGGGCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSQVLGGLMDAV*TVMSEVVLGPL Trigger: CAGAGGCCCCAGGACCACCTCCGACATGACCGTGCAGACAGCATCCATGAGACCACCAAGTACTTGAGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS CCA 72 bp | AATCCGACTCATTCAGGTCTCCCAAGTCCAGGAAGCTaGATCCCGGGAACAGCCTGTCGGCCGGGAAAGGTT | + |
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Preference number: 6 (lower is better) Translates to: NPTHSGLPSPGS*IPGTACRPGKV Trigger: AACCTTTCCCGGCCGACAGGCTGTTCCCGGGATCCAGCTTCCTGGACTTGGGAGACCTGAATGAGTCGGATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS CAA 72 bp | CTTGTTTCCCAGGGCCCACGCTCCGTGTTCCACATCTaGAGTGGTGTCCTCCATCTTGACAGGCACAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: LVSQGPRSVFHI*SGVLHLDRHKG Trigger: CCCCTTGTGCCTGTCAAGATGGAGGACACCACTCAAGATGTGGAACACGGAGCGTGGGCCCTGGGAAACAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS CAA 90 bp | TCATGGAACCACTCCTTGGGGTGGGAGAAGTTGGGGCTGGTGCCGTaGTCATCAGTGTCCTCTGGCCAGGTCTCTCTCAAGTACTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: SWNHSLGWEKLGLVP*SSVSSGQVSLKYLV Trigger: CACCAAGTACTTGAGAGAGACCTGGCCAGAGGACACTGATGACAACGGCACCAGCCCCAACTTCTCCCACCCCAAGGAGTGGTTCCATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS CCA 72 bp | TCTGGCCAGGTCTCTCTCAAGTACTTGGTGGTCTCATaGATGCTGTCTGCACGGTCATGTCGGAGGTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: SGQVSLKYLVVS*MLSARSCRRWS Trigger: GGACCACCTCCGACATGACCGTGCAGACAGCATCCATGAGACCACCAAGTACTTGAGAGAGACCTGGCCAGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS CCA 72 bp | TTGTACGGTCTGGAGATCTTGCTGGTGACCAGAGTCTaGAGTTTCTGCAGCTGCTGGAGCAGGGTCCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: LYGLEILLVTRV*SFCSCWSRVLL Trigger: CAACAGGACCCTGCTCCAGCAGCTGCAGAAACTCCAGACTCTGGTCACCAGCAAGATCTCCAGACCGTACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS CCA 72 bp | CAGTGTCCTCTGGCCAGGTCTCTCTCAAGTACTTGGTaGTCTCATGGATGCTGTCTGCACGGTCATGTCGGA | + |
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Preference number: 6 (lower is better) Translates to: QCPLARSLSSTW*SHGCCLHGHVG Trigger: TCCGACATGACCGTGCAGACAGCATCCATGAGACCACCAAGTACTTGAGAGAGACCTGGCCAGAGGACACTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS CCA 72 bp | GAAGTTGGGGCTGGTGCCGTTGTCATCAGTGTCCTCTaGCCAGGTCTCTCTCAAGTACTTGGTGGTCTCATG | + |
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Preference number: 6 (lower is better) Translates to: EVGAGAVVISVL*PGLSQVLGGLM Trigger: CATGAGACCACCAAGTACTTGAGAGAGACCTGGCCAGAGGACACTGATGACAACGGCACCAGCCCCAACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS TCA 72 bp | CAAAGTGGTCCAGGTGCTCCGGGAAGTGCGCATTGTTaGGGAAATCCGACTCATTCAGGTCTCCCAAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: QSGPGAPGSAHC*GNPTHSGLPSP Trigger: TGGACTTGGGAGACCTGAATGAGTCGGATTTCCTCAACAATGCGCACTTCCCGGAGCACCTGGACCACTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS GCA 72 bp | GAGAAGTCCTCCATGTTCTCCACAAAGTGGTCCAGGTaGTCCGGGAAGTGCGCATTGTTGAGGAAATCCGAC | + |
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Preference number: 6 (lower is better) Translates to: EKSSMFSTKWSR*SGKCALLRKSD Trigger: GTCGGATTTCCTCAACAATGCGCACTTCCCGGAGCACCTGGACCACTTTGTGGAGAACATGGAGGACTTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS CAA 72 bp | ACAAAGTGGTCCAGGTGCTCCGGGAAGTGCGCATTGTaGAGGAAATCCGACTCATTCAGGTCTCCCAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: TKWSRCSGKCAL*RKSDSFRSPKS Trigger: GGACTTGGGAGACCTGAATGAGTCGGATTTCCTCAACAATGCGCACTTCCCGGAGCACCTGGACCACTTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS CAA 72 bp | TCCACAAAGTGGTCCAGGTGCTCCGGGAAGTGCGCATaGTTGAGGAAATCCGACTCATTCAGGTCTCCCAAG | + |
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Preference number: 6 (lower is better) Translates to: STKWSRCSGKCA*LRKSDSFRSPK Trigger: CTTGGGAGACCTGAATGAGTCGGATTTCCTCAACAATGCGCACTTCCCGGAGCACCTGGACCACTTTGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS TCA 72 bp | ACTGTCAGCTGCGATAGGGTCTTCTTTCACAGTCATTaGGCCGGAAGAGAATGCAGGAAGGCAGGGCACAAG | + |
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Preference number: 6 (lower is better) Translates to: TVSCDRVFFHSH*AGRECRKAGHK Trigger: CTTGTGCCCTGCCTTCCTGCATTCTCTTCCGGCTCAATGACTGTGAAAGAAGACCCTATCGCAGCTGACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS CAA 72 bp | TCATCAGTGTCCTCTGGCCAGGTCTCTCTCAAGTACTaGGTGGTCTCATGGATGCTGTCTGCACGGTCATGT | + |
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Preference number: 6 (lower is better) Translates to: SSVSSGQVSLKY*VVSWMLSARSC Trigger: ACATGACCGTGCAGACAGCATCCATGAGACCACCAAGTACTTGAGAGAGACCTGGCCAGAGGACACTGATGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS CAA 90 bp | TTCTCGTCCAGCACAGGGTCATCAAAGAAACTGCTGAACAGGTCATaGGAGAAGTCCTCCATGTTCTCCACAAAGTGGTCCAGGTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: FSSSTGSSKKLLNRS*EKSSMFSTKWSRCS Trigger: GGAGCACCTGGACCACTTTGTGGAGAACATGGAGGACTTCTCCAATGACCTGTTCAGCAGTTTCTTTGATGACCCTGTGCTGGACGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS CCA 72 bp | CATTCCACATACTCCTTCTTCTTGCGGCGGCTCTCCTaGGCAGAAATCTTGTTCTTAATTTTCCTGCGTACT | + |
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Preference number: 6 (lower is better) Translates to: HSTYSFFLRRLS*AEILFLIFLRT Trigger: AGTACGCAGGAAAATTAAGAACAAGATTTCTGCCCAGGAGAGCCGCCGCAAGAAGAAGGAGTATGTGGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS CAA 72 bp | ACCTTCTTTTCTAGACATTCCACATACTCCTTCTTCTaGCGGCGGCTCTCCTGGGCAGAAATCTTGTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: TFFSRHSTYSFF*RRLSWAEILFL Trigger: TAAGAACAAGATTTCTGCCCAGGAGAGCCGCCGCAAGAAGAAGGAGTATGTGGAATGTCTAGAAAAGAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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| CDS CAA 90 bp | TATGTCTCCACCTTCTTTTCTAGACATTCCACATACTCCTTCTTCTaGCGGCGGCTCTCCTGGGCAGAAATCTTGTTCTTAATTTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: YVSTFFSRHSTYSFF*RRLSWAEILFLIFL Trigger: CAGGAAAATTAAGAACAAGATTTCTGCCCAGGAGAGCCGCCGCAAGAAGAAGGAGTATGTGGAATGTCTAGAAAAGAAGGTGGAGACATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028663.5 |
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