Pregenerated sensors for CRAT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026853Ensembl transcript IDs: ENSMUST00000028207.13, ENSMUST00000102854.10, ENSMUST00000102855.8, ENSMUST00000132981.9, ENSMUST00000134120.2, ENSMUST00000142096.2, ENSMUST00000154595.2, ENSMUST00000155790.8, ENSMUST00000156702.2
Found 343 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | GGGGCTCAAGAGTCACCAGAGTGTGGCAGCAGGGAGATGGCACCTTaGGGTGGGCTGGTGGAGGCTGGGCCTCAGATGTCCCTTTGGCTA | + |
Preference number: 1 (lower is better) Translates to: GAQESPECGSREMAP*GGLVEAGPQMSLWL Trigger: TAGCCAAAGGGACATCTGAGGCCCAGCCTCCACCAGCCCACCTCAAGGTGCCATCTCCCTGCTGCCACACTCTGGTGACTCTTGAGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR GCA 90 bp | TTGGGAACCTGGGCCGTAGTCTTGTTCAGCCTCTGGACTCAGCCCTaGACATGGACTCCGGCAGGTGCTAAGGACAGGGCCTGGAAGGCA | + |
Preference number: 1 (lower is better) Translates to: LGTWAVVLFSLWTQP*TWTPAGAKDRAWKA Trigger: TGCCTTCCAGGCCCTGTCCTTAGCACCTGCCGGAGTCCATGTGCAGGGCTGAGTCCAGAGGCTGAACAAGACTACGGCCCAGGTTCCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR CCA 90 bp | ACCTGGGCCGTAGTCTTGTTCAGCCTCTGGACTCAGCCCTGCACATaGACTCCGGCAGGTGCTAAGGACAGGGCCTGGAAGGCACTTGGT | + |
Preference number: 1 (lower is better) Translates to: TWAVVLFSLWTQPCT*TPAGAKDRAWKALG Trigger: ACCAAGTGCCTTCCAGGCCCTGTCCTTAGCACCTGCCGGAGTCCATGTGCAGGGCTGAGTCCAGAGGCTGAACAAGACTACGGCCCAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR GCA 90 bp | ACTGCCCGCCACCAAGCTGATGACCAGAGGCCATGCAGCACTGAGTaGGCACAGGCTGGCTTTCCTTTCCTGGCAGGTTATGTGCTACAC | + |
Preference number: 1 (lower is better) Translates to: TARHQADDQRPCSTE*AQAGFPFLAGYVLH Trigger: GTGTAGCACATAACCTGCCAGGAAAGGAAAGCCAGCCTGTGCGCACTCAGTGCTGCATGGCCTCTGGTCATCAGCTTGGTGGCGGGCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102855.8 |
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3UTR CCA 90 bp | CACCAGAGTGTGGCAGCAGGGAGATGGCACCTTGAGGTGGGCTGGTaGAGGCTGGGCCTCAGATGTCCCTTTGGCTACAAAGACTTAACC | + |
Preference number: 1 (lower is better) Translates to: HQSVAAGRWHLEVGW*RLGLRCPFGYKDLT Trigger: GGTTAAGTCTTTGTAGCCAAAGGGACATCTGAGGCCCAGCCTCCACCAGCCCACCTCAAGGTGCCATCTCCCTGCTGCCACACTCTGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR CCA 90 bp | TCAAGAGTCACCAGAGTGTGGCAGCAGGGAGATGGCACCTTGAGGTaGGCTGGTGGAGGCTGGGCCTCAGATGTCCCTTTGGCTACAAAG | + |
Preference number: 1 (lower is better) Translates to: SRVTRVWQQGDGTLR*AGGGWASDVPLATK Trigger: CTTTGTAGCCAAAGGGACATCTGAGGCCCAGCCTCCACCAGCCCACCTCAAGGTGCCATCTCCCTGCTGCCACACTCTGGTGACTCTTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR TCA 90 bp | ATTGACTGGGCTGCTAGTGTGTCCCTGCTCCATTGCCCCTCCTATTaGGTTCAGTGGAGGCCAGCTGCACCTGGCTTTGGGCTGAGGAGT | + |
Preference number: 1 (lower is better) Translates to: IDWAASVSLLHCPSY*VQWRPAAPGFGLRS Trigger: ACTCCTCAGCCCAAAGCCAGGTGCAGCTGGCCTCCACTGAACTCAATAGGAGGGGCAATGGAGCAGGGACACACTAGCAGCCCAGTCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR TCA 90 bp | TGGTGTGAGCCCATTCTTCCTCACTCACGATGGGCTGCAGTGCCTTaGGGTAATAGTCCAGGGATTGCTGAAGTGGGGGCACAGGCAGCC | + |
Preference number: 1 (lower is better) Translates to: WCEPILPHSRWAAVP*GNSPGIAEVGAQAA Trigger: GGCTGCCTGTGCCCCCACTTCAGCAATCCCTGGACTATTACCTCAAGGCACTGCAGCCCATCGTGAGTGAGGAAGAATGGGCTCACACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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3UTR GCA 90 bp | CTCTGGTACACTCTGGTACATAGCTATGCCGCTATGTCTGGTCTGTaGTACTGTCAAAAACCCTCCCTCCCTGCCAGCCTGCCTCCGGCC | + |
Preference number: 1 (lower is better) Translates to: LWYTLVHSYAAMSGL*YCQKPSLPASLPPA Trigger: GGCCGGAGGCAGGCTGGCAGGGAGGGAGGGTTTTTGACAGTAGCACAGACCAGACATAGCGGCATAGCTATGTACCAGAGTGTACCAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102855.8 |
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3UTR CCA 90 bp | AGTCACCAGAGTGTGGCAGCAGGGAGATGGCACCTTGAGGTGGGCTaGTGGAGGCTGGGCCTCAGATGTCCCTTTGGCTACAAAGACTTA | + |
Preference number: 1 (lower is better) Translates to: SHQSVAAGRWHLEVG*WRLGLRCPFGYKDL Trigger: TAAGTCTTTGTAGCCAAAGGGACATCTGAGGCCCAGCCTCCACCAGCCCACCTCAAGGTGCCATCTCCCTGCTGCCACACTCTGGTGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR CCA 90 bp | GCTCCATTGCCCCTCCTATTGAGTTCAGTGGAGGCCAGCTGCACCTaGCTTTGGGCTGAGGAGTGTTTGCCACCCCAGATCCATAGCACT | + |
Preference number: 1 (lower is better) Translates to: APLPLLLSSVEASCT*LWAEECLPPQIHST Trigger: AGTGCTATGGATCTGGGGTGGCAAACACTCCTCAGCCCAAAGCCAGGTGCAGCTGGCCTCCACTGAACTCAATAGGAGGGGCAATGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR CCA 90 bp | GTTCCCCTACGCCCCCTGAGGTCTGAAACTCATCCACCAGTTGCTTaGTGTGAGCCCATTCTTCCTCACTCACGATGGGCTGCAGTGCCT | + |
Preference number: 1 (lower is better) Translates to: VPLRPLRSETHPPVA*CEPILPHSRWAAVP Trigger: AGGCACTGCAGCCCATCGTGAGTGAGGAAGAATGGGCTCACACCAAGCAACTGGTGGATGAGTTTCAGACCTCAGGGGGCGTAGGGGAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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3UTR GCA 90 bp | GACAAGAGATTGGCCAGGCTGAGGAAAGGAACTCTTCCCGGCTCCTaGTGTGAGAAGGGATGGGCTGGACTGGCTCTCTTCTCCATGGTT | + |
Preference number: 1 (lower is better) Translates to: DKRLARLRKGTLPGS*CEKGWAGLALFSMV Trigger: AACCATGGAGAAGAGAGCCAGTCCAGCCCATCCCTTCTCACAGCAGGAGCCGGGAAGAGTTCCTTTCCTCAGCCTGGCCAATCTCTTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR GCA 90 bp | GGCCGGGCACACGGCAAGAAGACAGGATCTGATAATACTGGTTCATaGACAGCGGCTGTCCTCCCAGGAACTCAACTGGCAGCGTCTCAT | + |
Preference number: 1 (lower is better) Translates to: GRAHGKKTGSDNTGS*TAAVLPGTQLAASH Trigger: ATGAGACGCTGCCAGTTGAGTTCCTGGGAGGACAGCCGCTGTGCATGAACCAGTATTATCAGATCCTGTCTTCTTGCCGTGTGCCCGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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3UTR TCA 90 bp | GGGATGGGCTGGACTGGCTCTCTTCTCCATGGTTCATGGAGTGGATaGTACATTGGGAACCTGGGCCGTAGTCTTGTTCAGCCTCTGGAC | + |
Preference number: 1 (lower is better) Translates to: GMGWTGSLLHGSWSG*YIGNLGRSLVQPLD Trigger: GTCCAGAGGCTGAACAAGACTACGGCCCAGGTTCCCAATGTATCATCCACTCCATGAACCATGGAGAAGAGAGCCAGTCCAGCCCATCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR TCA 90 bp | ACAGATTTTGGCCTGGCTGTGGAGATGACAAGAGATTGGCCAGGCTaGGGAAAGGAACTCTTCCCGGCTCCTGCTGTGAGAAGGGATGGG | + |
Preference number: 1 (lower is better) Translates to: TDFGLAVEMTRDWPG*GKELFPAPAVRRDG Trigger: CCCATCCCTTCTCACAGCAGGAGCCGGGAAGAGTTCCTTTCCTCAGCCTGGCCAATCTCTTGTCATCTCCACAGCCAGGCCAAAATCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR GCA 90 bp | CAGCCTGAGGATGTTGTCTCTGGGAGCTTGCTGGCCCACACTGCCTaGTTGGATACAAGCTCCCTGAACCAGAGACAGGTAGAAAATGGC | + |
Preference number: 1 (lower is better) Translates to: QPEDVVSGSLLAHTA*LDTSSLNQRQVENG Trigger: GCCATTTTCTACCTGTCTCTGGTTCAGGGAGCTTGTATCCAAGCAGGCAGTGTGGGCCAGCAAGCTCCCAGAGACAACATCCTCAGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR GCA 90 bp | ATAGTCCAGGGATTGCTGAAGTGGGGGCACAGGCAGCCTTGGCAGTaGATCTTGGTGGGCCTTGAAGCGACCAGAAACCTTCATCAAGGA | + |
Preference number: 1 (lower is better) Translates to: IVQGLLKWGHRQPWQ*ILVGLEATRNLHQG Trigger: TCCTTGATGAAGGTTTCTGGTCGCTTCAAGGCCCACCAAGATGCACTGCCAAGGCTGCCTGTGCCCCCACTTCAGCAATCCCTGGACTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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3UTR GCA 90 bp | TTGCTTGGTGTGAGCCCATTCTTCCTCACTCACGATGGGCTGCAGTaGCTTGAGGTAATAGTCCAGGGATTGCTGAAGTGGGGGCACAGG | + |
Preference number: 1 (lower is better) Translates to: LLGVSPFFLTHDGLQ*LEVIVQGLLKWGHR Trigger: CCTGTGCCCCCACTTCAGCAATCCCTGGACTATTACCTCAAGGCACTGCAGCCCATCGTGAGTGAGGAAGAATGGGCTCACACCAAGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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3UTR CCA 90 bp | AGGCTGAGGAAAGGAACTCTTCCCGGCTCCTGCTGTGAGAAGGGATaGGCTGGACTGGCTCTCTTCTCCATGGTTCATGGAGTGGATGAT | + |
Preference number: 1 (lower is better) Translates to: RLRKGTLPGSCCEKG*AGLALFSMVHGVDD Trigger: ATCATCCACTCCATGAACCATGGAGAAGAGAGCCAGTCCAGCCCATCCCTTCTCACAGCAGGAGCCGGGAAGAGTTCCTTTCCTCAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR CCA 90 bp | GAGGTAATAGTCCAGGGATTGCTGAAGTGGGGGCACAGGCAGCCTTaGCAGTGCATCTTGGTGGGCCTTGAAGCGACCAGAAACCTTCAT | + |
Preference number: 1 (lower is better) Translates to: EVIVQGLLKWGHRQP*QCILVGLEATRNLH Trigger: ATGAAGGTTTCTGGTCGCTTCAAGGCCCACCAAGATGCACTGCCAAGGCTGCCTGTGCCCCCACTTCAGCAATCCCTGGACTATTACCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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3UTR CCA 90 bp | GCTCTCTTCTCCATGGTTCATGGAGTGGATGATACATTGGGAACCTaGGCCGTAGTCTTGTTCAGCCTCTGGACTCAGCCCTGCACATGG | + |
Preference number: 1 (lower is better) Translates to: ALFSMVHGVDDTLGT*AVVLFSLWTQPCTW Trigger: CCATGTGCAGGGCTGAGTCCAGAGGCTGAACAAGACTACGGCCCAGGTTCCCAATGTATCATCCACTCCATGAACCATGGAGAAGAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR CCA 90 bp | TGCCTGCTTGGATACAAGCTCCCTGAACCAGAGACAGGTAGAAAATaGCAGGGCCAGACATCTGCCCTGCTTGCCCCTCAGCTGAATCAA | + |
Preference number: 1 (lower is better) Translates to: CLLGYKLPEPETGRK*QGQTSALLAPQLNQ Trigger: TTGATTCAGCTGAGGGGCAAGCAGGGCAGATGTCTGGCCCTGCCATTTTCTACCTGTCTCTGGTTCAGGGAGCTTGTATCCAAGCAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR CCA 90 bp | CCTCCCACCGCTGGTCCTTGGGCATTTACCAATGAAGACAGATTTTaGCCTGGCTGTGGAGATGACAAGAGATTGGCCAGGCTGAGGAAA | + |
Preference number: 1 (lower is better) Translates to: PPTAGPWAFTNEDRF*PGCGDDKRLARLRK Trigger: TTTCCTCAGCCTGGCCAATCTCTTGTCATCTCCACAGCCAGGCCAAAATCTGTCTTCATTGGTAAATGCCCAAGGACCAGCGGTGGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR GCA 90 bp | CTGGGGAGGTCTGCCCTTCACAAGGCTTCCATATCCAACTCCACATaGATTGTCTGCCTCAGTGAGGAGACTTCTGCCTTAGAAGAACTG | + |
Preference number: 1 (lower is better) Translates to: LGRSALHKASISNST*IVCLSEETSALEEL Trigger: CAGTTCTTCTAAGGCAGAAGTCTCCTCACTGAGGCAGACAATGCATGTGGAGTTGGATATGGAAGCCTTGTGAAGGGCAGACCTCCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102855.8 |
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3UTR TCA 90 bp | TCACAAGGCTTCCATATCCAACTCCACATGCATTGTCTGCCTCAGTaGGGAGACTTCTGCCTTAGAAGAACTGCCCGCCACCAAGCTGAT | + |
Preference number: 1 (lower is better) Translates to: SQGFHIQLHMHCLPQ*GDFCLRRTARHQAD Trigger: ATCAGCTTGGTGGCGGGCAGTTCTTCTAAGGCAGAAGTCTCCTCACTGAGGCAGACAATGCATGTGGAGTTGGATATGGAAGCCTTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102855.8 |
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3UTR CAA 90 bp | TGGGGCTCAAGAGTCACCAGAGTGTGGCAGCAGGGAGATGGCACCTaGAGGTGGGCTGGTGGAGGCTGGGCCTCAGATGTCCCTTTGGCT | + |
Preference number: 2 (lower is better) Translates to: WGSRVTRVWQQGDGT*RWAGGGWASDVPLA Trigger: AGCCAAAGGGACATCTGAGGCCCAGCCTCCACCAGCCCACCTCAAGGTGCCATCTCCCTGCTGCCACACTCTGGTGACTCTTGAGCCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR-3UTR CCA 90 bp | AGAGTGTGGCAGCAGGGAGATGGCACCTTGAGGTGGGCTGGTGGAGGCTGGGCCTGCTGTGAGAAGGGATaGGCTGGACTGGCTCTCTTC | + |
Preference number: 2 (lower is better) Translates to: RVWQQGDGTLRWAGGGWACCEKG*AGLALF Trigger: GAAGAGAGCCAGTCCAGCCCATCCCTTCTCACAGCA...GGCCCAGCCTCCACCAGCCCACCTCAAGGTGCCATCTCCCTGCTGCCACACTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR-3UTR GCA 90 bp | CAGGCCCTGCCTCAGGTGACCACAGGTCAGTCAGGTCACGGAGCACTTCACAGGCTGGCCCACACTGCCTaGTTGGATACAAGCTCCCTG | + |
Preference number: 2 (lower is better) Translates to: QALPQVTTGQSGHGALHRLAHTA*LDTSSL Trigger: CAGGGAGCTTGTATCCAAGCAGGCAGTGTGGGCCAG...CCTGTGAAGTGCTCCGTGACCTGACTGACCTGTGGTCACCTGAGGCAGGGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR-3UTR CCA 90 bp | GGTGCCAGCCTCCCGGCCCCACATTCCAAGCACATATGTACCCAGGGGCTTCCGGTGTCCATCCCAAAGTaGGTTTGGCTGTGGAAGTGG | + |
Preference number: 2 (lower is better) Translates to: GASLPAPHSKHICTQGLPVSIPK*VWLWKW Trigger: CCACTTCCACAGCCAAACCCACTTTGGGATGGACAC...CGGAAGCCCCTGGGTACATATGTGCTTGGAATGTGGGGCCGGGAGGCTGGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR-3UTR CCA 90 bp | GCAGCAGGGAGATGGCACCTTGAGGTGGGCTGGTGGAGGCTGGGCCTCAGATGTGTGTCCATCCCAAAGTaGGTTTGGCTGTGGAAGTGG | + |
Preference number: 2 (lower is better) Translates to: AAGRWHLEVGWWRLGLRCVSIPK*VWLWKW Trigger: CCACTTCCACAGCCAAACCCACTTTGGGATGGACAC...ACATCTGAGGCCCAGCCTCCACCAGCCCACCTCAAGGTGCCATCTCCCTGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR-3UTR CCA 90 bp | GGGAGCTTGCTGGCCCACACTGCCTGCTTGGATACAAGCTCCCTGAACCAGAGACTTGAGGTGGGCTGGTaGAGGCTGGGCCTCAGATGT | + |
Preference number: 2 (lower is better) Translates to: GSLLAHTACLDTSSLNQRLEVGW*RLGLRC Trigger: ACATCTGAGGCCCAGCCTCCACCAGCCCACCTCAAG...TCTCTGGTTCAGGGAGCTTGTATCCAAGCAGGCAGTGTGGGCCAGCAAGCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR CAA 90 bp | CAGGGATTGCTGAAGTGGGGGCACAGGCAGCCTTGGCAGTGCATCTaGGTGGGCCTTGAAGCGACCAGAAACCTTCATCAAGGAGGAGGG | + |
Preference number: 2 (lower is better) Translates to: QGLLKWGHRQPWQCI*VGLEATRNLHQGGG Trigger: CCCTCCTCCTTGATGAAGGTTTCTGGTCGCTTCAAGGCCCACCAAGATGCACTGCCAAGGCTGCCTGTGCCCCCACTTCAGCAATCCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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3UTR-3UTR TCA 90 bp | ATACTGGTTCATGCACAGCGGCTGTCCTCCCAGGAACTCAACTGGCAGCGTCTCGGAGATAGGCTGTCTTaGGCCACCACTCGGACAGCC | + |
Preference number: 2 (lower is better) Translates to: ILVHAQRLSSQELNWQRLGDRLS*ATTRTA Trigger: GGCTGTCCGAGTGGTGGCTCAAGACAGCCTATCTCC...GAGACGCTGCCAGTTGAGTTCCTGGGAGGACAGCCGCTGTGCATGAACCAGTAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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3UTR-3UTR CCA 90 bp | GCAATAAGTCTGGGGCTCAAGAGTCACCAGAGTGTGGCAGCAGGGAGATGGCACGGCCTGGAAGGCACTTaGTGTGGACGTTGGGGCCTT | + |
Preference number: 2 (lower is better) Translates to: AISLGLKSHQSVAAGRWHGLEGT*CGRWGL Trigger: AAGGCCCCAACGTCCACACCAAGTGCCTTCCAGGCC...GTGCCATCTCCCTGCTGCCACACTCTGGTGACTCTTGAGCCCCAGACTTATTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR-3UTR GCA 90 bp | GCAGCAGGGAGATGGCACCTTGAGGTGGGCTGGTGGAGGCTGGGCCTCAGATGTGGCCTTGCTAGAGAATaGTTTTCTGGCTCAAACTGG | + |
Preference number: 2 (lower is better) Translates to: AAGRWHLEVGWWRLGLRCGLARE*FSGSNW Trigger: CCAGTTTGAGCCAGAAAAGCATTCTCTAGCAAGGCC...ACATCTGAGGCCCAGCCTCCACCAGCCCACCTCAAGGTGCCATCTCCCTGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR-3UTR CCA 90 bp | ACAGGTAGAAAATGGCAGGGCCAGACATCTGCCCTGCTTGCCCCTCAGCTGAATCTTGAGGTGGGCTGGTaGAGGCTGGGCCTCAGATGT | + |
Preference number: 2 (lower is better) Translates to: TGRKWQGQTSALLAPQLNLEVGW*RLGLRC Trigger: ACATCTGAGGCCCAGCCTCCACCAGCCCACCTCAAG...ATTCAGCTGAGGGGCAAGCAGGGCAGATGTCTGGCCCTGCCATTTTCTACCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR-3UTR CCA 90 bp | TGCACCTGGCTTTGGGCTGAGGAGTGTTTGCCACCCCAGATCCATAGCACTGCAAGAGTCACCAGAGTGTaGCAGCAGGGAGATGGCACC | + |
Preference number: 2 (lower is better) Translates to: CTWLWAEECLPPQIHSTARVTRV*QQGDGT Trigger: GGTGCCATCTCCCTGCTGCCACACTCTGGTGACTCT...TGCAGTGCTATGGATCTGGGGTGGCAAACACTCCTCAGCCCAAAGCCAGGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR CAA 90 bp | GCCTTAGTTGTCACAGCTCAGCCTGAGGATGTTGTCTCTGGGAGCTaGCTGGCCCACACTGCCTGCTTGGATACAAGCTCCCTGAACCAG | + |
Preference number: 2 (lower is better) Translates to: ALVVTAQPEDVVSGS*LAHTACLDTSSLNQ Trigger: CTGGTTCAGGGAGCTTGTATCCAAGCAGGCAGTGTGGGCCAGCAAGCTCCCAGAGACAACATCCTCAGGCTGAGCTGTGACAACTAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR-3UTR TCA 90 bp | CACAGCGGCTGTCCTCCCAGGAACTCAACTGGCAGCGTCTCATTGTCAATCATGTTCCCCTACGCCCCCTaGGGTCTGAAACTCATCCAC | + |
Preference number: 2 (lower is better) Translates to: HSGCPPRNSTGSVSLSIMFPYAP*GLKLIH Trigger: GTGGATGAGTTTCAGACCTCAGGGGGCGTAGGGGAA...CATGATTGACAATGAGACGCTGCCAGTTGAGTTCCTGGGAGGACAGCCGCTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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3UTR-3UTR TCA 90 bp | CTTGGGGCCGGGCACACGGCAAGAAGACAGGATCTGATAATACTGGTTCATGCACTGGGCTGGAGTAGATaGCCACAGGCTGGCGGAACT | + |
Preference number: 2 (lower is better) Translates to: LGAGHTARRQDLIILVHALGWSR*PQAGGT Trigger: AGTTCCGCCAGCCTGTGGTCATCTACTCCAGCCCAG...TGCATGAACCAGTATTATCAGATCCTGTCTTCTTGCCGTGTGCCCGGCCCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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3UTR-3UTR GCA 90 bp | CAGAGTCTCAAGCCCTTCCCTGCCTTACAGATGACTAATGTACTCTTGGGAGCCGCAGGGCCAGACATCTaGCCTGCTTGCCCCTCAGCT | + |
Preference number: 2 (lower is better) Translates to: QSLKPFPALQMTNVLLGAAGPDI*PACPSA Trigger: AGCTGAGGGGCAAGCAGGGCAGATGTCTGGCCCTGC...GGCTCCCAAGAGTACATTAGTCATCTGTAAGGCAGGGAAGGGCTTGAGACTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR-3UTR CCA 90 bp | TCTGGGAGCTTGCTGGCCCACACTGCCTGCTTGGATACAAGCTCCCTGAACCAGATCCCAAAGTGGGTTTaGCTGTGGAAGTGGCAGGTC | + |
Preference number: 2 (lower is better) Translates to: SGSLLAHTACLDTSSLNQIPKWV*LWKWQV Trigger: GACCTGCCACTTCCACAGCCAAACCCACTTTGGGAT...CTGGTTCAGGGAGCTTGTATCCAAGCAGGCAGTGTGGGCCAGCAAGCTCCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR-3UTR CCA 90 bp | GGTGCCAGCCTCCCGGCCCCACATTCCAAGCACATATGTACCCAGGGGCTTCCGAATGAAGACAGATTTTaGCCTGGCTGTGGAGATGAC | + |
Preference number: 2 (lower is better) Translates to: GASLPAPHSKHICTQGLPNEDRF*PGCGDD Trigger: GTCATCTCCACAGCCAGGCCAAAATCTGTCTTCATT...CGGAAGCCCCTGGGTACATATGTGCTTGGAATGTGGGGCCGGGAGGCTGGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR-3UTR CCA 90 bp | CTTGGGGCCGGGCACACGGCAAGAAGACAGGATCTGATAATACTGGTTCATGCACAGGGATTGCTGAAGTaGGGGCACAGGCAGCCTTGG | + |
Preference number: 2 (lower is better) Translates to: LGAGHTARRQDLIILVHAQGLLK*GHRQPW Trigger: CCAAGGCTGCCTGTGCCCCCACTTCAGCAATCCCTG...TGCATGAACCAGTATTATCAGATCCTGTCTTCTTGCCGTGTGCCCGGCCCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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3UTR CAA 90 bp | ATGGTTCATGGAGTGGATGATACATTGGGAACCTGGGCCGTAGTCTaGTTCAGCCTCTGGACTCAGCCCTGCACATGGACTCCGGCAGGT | + |
Preference number: 2 (lower is better) Translates to: MVHGVDDTLGTWAVV*FSLWTQPCTWTPAG Trigger: ACCTGCCGGAGTCCATGTGCAGGGCTGAGTCCAGAGGCTGAACAAGACTACGGCCCAGGTTCCCAATGTATCATCCACTCCATGAACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
||
3UTR CAA 90 bp | TGGTGGGCCTTGAAGCGACCAGAAACCTTCATCAAGGAGGAGGGCTaGAGGAGGCCCAGGGGTTTTACCTGGTCTCCTTTATCCACCTTG | + |
Preference number: 2 (lower is better) Translates to: WWALKRPETFIKEEG*RRPRGFTWSPLSTL Trigger: CAAGGTGGATAAAGGAGACCAGGTAAAACCCCTGGGCCTCCTCAAGCCCTCCTCCTTGATGAAGGTTTCTGGTCGCTTCAAGGCCCACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
||
3UTR-3UTR TCA 90 bp | CAGGTCTTTTCTGTGGCCTGGTCAGAACTAGGATACATCCTGGGGAAATCTGGTAGGCCCTGCCTCAGGTaGCCACAGGTCAGTCAGGTC | + |
Preference number: 2 (lower is better) Translates to: QVFSVAWSELGYILGKSGRPCLR*PQVSQV Trigger: GACCTGACTGACCTGTGGTCACCTGAGGCAGGGCCT...ACCAGATTTCCCCAGGATGTATCCTAGTTCTGACCAGGCCACAGAAAAGACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
||
3UTR-3UTR GCA 90 bp | AAGGTTGGGGACCTGATAGTGACAGCTCCTCCAGCCCACTTCCAGTCAGCATCTGGGCTGAGGAGTGTTTaGCACCCCAGATCCATAGCA | + |
Preference number: 2 (lower is better) Translates to: KVGDLIVTAPPAHFQSASGLRSV*HPRSIA Trigger: TGCTATGGATCTGGGGTGGCAAACACTCCTCAGCCC...AGATGCTGACTGGAAGTGGGCTGGAGGAGCTGTCACTATCAGGTCCCCAACCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR-3UTR GCA 90 bp | TTGCTTGGTGTGAGCCCATTCTTCCTCACTCACGATGGGCTGCAGTGCCTTGAGAGGCAGCCTTGGCAGTaGATCTTGGTGGGCCTTGAA | + |
Preference number: 2 (lower is better) Translates to: LLGVSPFFLTHDGLQCLERQPWQ*ILVGLE Trigger: TTCAAGGCCCACCAAGATGCACTGCCAAGGCTGCCT...CTCAAGGCACTGCAGCCCATCGTGAGTGAGGAAGAATGGGCTCACACCAAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
||
3UTR-3UTR CCA 90 bp | GAGGTAGTTTCATCCTATGTTGCAGGCCCTGCCTCAGGTGACCACAGGTCAGTCGTCTTGTTCAGCCTCTaGACTCAGCCCTGCACATGG | + |
Preference number: 2 (lower is better) Translates to: EVVSSYVAGPASGDHRSVVLFSL*TQPCTW Trigger: CCATGTGCAGGGCTGAGTCCAGAGGCTGAACAAGAC...GACTGACCTGTGGTCACCTGAGGCAGGGCCTGCAACATAGGATGAAACTACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR-3UTR CCA 90 bp | GAGGTAGTTTCATCCTATGTTGCAGGCCCTGCCTCAGGTGACCACAGGTCAGTCTGCTGTGAGAAGGGATaGGCTGGACTGGCTCTCTTC | + |
Preference number: 2 (lower is better) Translates to: EVVSSYVAGPASGDHRSVCCEKG*AGLALF Trigger: GAAGAGAGCCAGTCCAGCCCATCCCTTCTCACAGCA...GACTGACCTGTGGTCACCTGAGGCAGGGCCTGCAACATAGGATGAAACTACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
||
3UTR-3UTR CCA 90 bp | ATGCACAGCGGCTGTCCTCCCAGGAACTCAACTGGCAGCGTCTCATTGTCAATCCTTGGCAGTGCATCTTaGTGGGCCTTGAAGCGACCA | + |
Preference number: 2 (lower is better) Translates to: MHSGCPPRNSTGSVSLSILGSAS*WALKRP Trigger: TGGTCGCTTCAAGGCCCACCAAGATGCACTGCCAAG...GATTGACAATGAGACGCTGCCAGTTGAGTTCCTGGGAGGACAGCCGCTGTGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
||
3UTR-3UTR TCA 90 bp | CACACGGCAAGAAGACAGGATCTGATAATACTGGTTCATGCACAGCGGCTGTCCTCAAGGAGGAGGGCTTaGGGAGGCCCAGGGGTTTTA | + |
Preference number: 2 (lower is better) Translates to: HTARRQDLIILVHAQRLSSRRRA*GGPGVL Trigger: TAAAACCCCTGGGCCTCCTCAAGCCCTCCTCCTTGA...GGACAGCCGCTGTGCATGAACCAGTATTATCAGATCCTGTCTTCTTGCCGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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3UTR-3UTR TCA 90 bp | AGCGGCTGTCCTCCCAGGAACTCAACTGGCAGCGTCTCATTGTCAATCATGGACCATCTTGGTGGGCCTTaGAGCGACCAGAAACCTTCA | + |
Preference number: 2 (lower is better) Translates to: SGCPPRNSTGSVSLSIMDHLGGP*SDQKPS Trigger: TGAAGGTTTCTGGTCGCTTCAAGGCCCACCAAGATG...GTCCATGATTGACAATGAGACGCTGCCAGTTGAGTTCCTGGGAGGACAGCCGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
||
3UTR-3UTR TCA 90 bp | GCAAGAAGACAGGATCTGATAATACTGGTTCATGCACAGCGGCTGTCCTCCCAGACGCCCCCTGAGGTCTaGAACTCATCCACCAGTTGC | + |
Preference number: 2 (lower is better) Translates to: ARRQDLIILVHAQRLSSQTPPEV*NSSTSC Trigger: GCAACTGGTGGATGAGTTTCAGACCTCAGGGGGCGT...CTGGGAGGACAGCCGCTGTGCATGAACCAGTATTATCAGATCCTGTCTTCTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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3UTR-3UTR CCA 90 bp | TGCACCTGGCTTTGGGCTGAGGAGTGTTTGCCACCCCAGATCCATAGCACTGCACAAGGAAGTGAGCCATaGCAAGTGTCCATCCCAAAG | + |
Preference number: 2 (lower is better) Translates to: CTWLWAEECLPPQIHSTAQGSEP*QVSIPK Trigger: CTTTGGGATGGACACTTGCCATGGCTCACTTCCTTG...TGCAGTGCTATGGATCTGGGGTGGCAAACACTCCTCAGCCCAAAGCCAGGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR-3UTR CCA 90 bp | AAGGTTGGGGACCTGATAGTGACAGCTCCTCCAGCCCACTTCCAGTCAGCATCTGAGACAGGTAGAAAATaGCAGGGCCAGACATCTGCC | + |
Preference number: 2 (lower is better) Translates to: KVGDLIVTAPPAHFQSASETGRK*QGQTSA Trigger: GGCAGATGTCTGGCCCTGCCATTTTCTACCTGTCTC...AGATGCTGACTGGAAGTGGGCTGGAGGAGCTGTCACTATCAGGTCCCCAACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR-3UTR CCA 90 bp | CTTGGGGCCGGGCACACGGCAAGAAGACAGGATCTGATAATACTGGTTCATGCAGGCAGTGCATCTTGGTaGGCCTTGAAGCGACCAGAA | + |
Preference number: 2 (lower is better) Translates to: LGAGHTARRQDLIILVHAGSASW*ALKRPE Trigger: TTCTGGTCGCTTCAAGGCCCACCAAGATGCACTGCC...TGCATGAACCAGTATTATCAGATCCTGTCTTCTTGCCGTGTGCCCGGCCCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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3UTR-3UTR TCA 90 bp | ATGCACAGCGGCTGTCCTCCCAGGAACTCAACTGGCAGCGTCTCATTGTCAATCCCAATACACCCTCGATaGGTTTGGCAGCAAACCGAA | + |
Preference number: 2 (lower is better) Translates to: MHSGCPPRNSTGSVSLSIPIHPR*VWQQTE Trigger: TTCGGTTTGCTGCCAAACTCATCGAGGGTGTATTGG...GATTGACAATGAGACGCTGCCAGTTGAGTTCCTGGGAGGACAGCCGCTGTGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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3UTR-3UTR GCA 90 bp | ATAATACTGGTTCATGCACAGCGGCTGTCCTCCCAGGAACTCAACTGGCAGCGTCACGATGGGCTGCAGTaGCTTGAGGTAATAGTCCAG | + |
Preference number: 2 (lower is better) Translates to: IILVHAQRLSSQELNWQRHDGLQ*LEVIVQ Trigger: CTGGACTATTACCTCAAGGCACTGCAGCCCATCGTG...ACGCTGCCAGTTGAGTTCCTGGGAGGACAGCCGCTGTGCATGAACCAGTATTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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3UTR-3UTR CCA 90 bp | CGCACAGGCTGGCTTTCCTTTCCTGGCAGGTTATGTGCTACACCCTCTGGGTGGAATGAAGACAGATTTTaGCCTGGCTGTGGAGATGAC | + |
Preference number: 2 (lower is better) Translates to: RTGWLSFPGRLCATPSGWNEDRF*PGCGDD Trigger: GTCATCTCCACAGCCAGGCCAAAATCTGTCTTCATT...CCACCCAGAGGGTGTAGCACATAACCTGCCAGGAAAGGAAAGCCAGCCTGTGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102855.8 |
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3UTR-3UTR CCA 90 bp | TGTGGTGTGAGCCTGGGTGAGCTGAGCTTCAGAGTCTCAAGCCCTTCCCTGCCTCCTCAGATGTCCCTTTaGCTACAAAGACTTAACCCT | + |
Preference number: 2 (lower is better) Translates to: CGVSLGELSFRVSSPSLPPQMSL*LQRLNP Trigger: AGGGTTAAGTCTTTGTAGCCAAAGGGACATCTGAGG...AGGCAGGGAAGGGCTTGAGACTCTGAAGCTCAGCTCACCCAGGCTCACACCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR-3UTR CCA 90 bp | ATGCACAGCGGCTGTCCTCCCAGGAACTCAACTGGCAGCGTCTCATTGTCAATCCATCCACCAGTTGCTTaGTGTGAGCCCATTCTTCCT | + |
Preference number: 2 (lower is better) Translates to: MHSGCPPRNSTGSVSLSIHPPVA*CEPILP Trigger: AGGAAGAATGGGCTCACACCAAGCAACTGGTGGATG...GATTGACAATGAGACGCTGCCAGTTGAGTTCCTGGGAGGACAGCCGCTGTGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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3UTR-3UTR TCA 90 bp | AGAAGACAGGATCTGATAATACTGGTTCATGCACAGCGGCTGTCCTCCCAGGAATGGGCTGCAGTGCCTTaGGGTAATAGTCCAGGGATT | + |
Preference number: 2 (lower is better) Translates to: RRQDLIILVHAQRLSSQEWAAVP*GNSPGI Trigger: AATCCCTGGACTATTACCTCAAGGCACTGCAGCCCA...TTCCTGGGAGGACAGCCGCTGTGCATGAACCAGTATTATCAGATCCTGTCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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3UTR-3UTR GCA 90 bp | GGAGTTCAGGTCTTTTCTGTGGCCTGGTCAGAACTAGGATACATCCTGGGGAAACTGCTAGTGTGTCCCTaGTCCATTGCCCCTCCTATT | + |
Preference number: 2 (lower is better) Translates to: GVQVFSVAWSELGYILGKLLVCP*SIAPPI Trigger: AATAGGAGGGGCAATGGAGCAGGGACACACTAGCAG...TTTCCCCAGGATGTATCCTAGTTCTGACCAGGCCACAGAAAAGACCTGAACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR-3UTR CCA 90 bp | GCAAGAAGACAGGATCTGATAATACTGGTTCATGCACAGCGGCTGTCCTCCCAGCCCAGGGGTTTTACCTaGTCTCCTTTATCCACCTTG | + |
Preference number: 2 (lower is better) Translates to: ARRQDLIILVHAQRLSSQPRGFT*SPLSTL Trigger: CAAGGTGGATAAAGGAGACCAGGTAAAACCCCTGGG...CTGGGAGGACAGCCGCTGTGCATGAACCAGTATTATCAGATCCTGTCTTCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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3UTR CAA 90 bp | CCTCCCAGGAACTCAACTGGCAGCGTCTCATTGTCAATCATGGACTaGAAATCCAATACACCCTCGATGAGTTTGGCAGCAAACCGAAGC | + |
Preference number: 2 (lower is better) Translates to: PPRNSTGSVSLSIMD*KSNTPSMSLAANRS Trigger: GCTTCGGTTTGCTGCCAAACTCATCGAGGGTGTATTGGATTTCAAGTCCATGATTGACAATGAGACGCTGCCAGTTGAGTTCCTGGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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3UTR CAA 90 bp | ATGCACAGCGGCTGTCCTCCCAGGAACTCAACTGGCAGCGTCTCATaGTCAATCATGGACTTGAAATCCAATACACCCTCGATGAGTTTG | + |
Preference number: 2 (lower is better) Translates to: MHSGCPPRNSTGSVS*SIMDLKSNTPSMSL Trigger: CAAACTCATCGAGGGTGTATTGGATTTCAAGTCCATGATTGACAATGAGACGCTGCCAGTTGAGTTCCTGGGAGGACAGCCGCTGTGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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3UTR-3UTR GCA 90 bp | CAGGTCTTTTCTGTGGCCTGGTCAGAACTAGGATACATCCTGGGGAAATCTGGTTTTCTGTATACTTGCTaGCCTGGGATGGCTGAGGGA | + |
Preference number: 2 (lower is better) Translates to: QVFSVAWSELGYILGKSGFLYTC*PGMAEG Trigger: TCCCTCAGCCATCCCAGGGCAGCAAGTATACAGAAA...ACCAGATTTCCCCAGGATGTATCCTAGTTCTGACCAGGCCACAGAAAAGACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR-3UTR CCA 90 bp | ATGGTTCATGGAGTGGATGATACATTGGGAACCTGGGCCGTAGTCTTGTTCAGCCAAGGAAGTGAGCCATaGCAAGTGTCCATCCCAAAG | + |
Preference number: 2 (lower is better) Translates to: MVHGVDDTLGTWAVVLFSQGSEP*QVSIPK Trigger: CTTTGGGATGGACACTTGCCATGGCTCACTTCCTTG...GCTGAACAAGACTACGGCCCAGGTTCCCAATGTATCATCCACTCCATGAACCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR-3UTR CCA 90 bp | ATGGAAGCAATAAGTCTGGGGCTCAAGAGTCACCAGAGTGTGGCAGCAGGGAGACCTCAGATGTCCCTTTaGCTACAAAGACTTAACCCT | + |
Preference number: 2 (lower is better) Translates to: MEAISLGLKSHQSVAAGRPQMSL*LQRLNP Trigger: AGGGTTAAGTCTTTGTAGCCAAAGGGACATCTGAGG...TCTCCCTGCTGCCACACTCTGGTGACTCTTGAGCCCCAGACTTATTGCTTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR-3UTR TCA 90 bp | CAGGTCTTTTCTGTGGCCTGGTCAGAACTAGGATACATCCTGGGGAAATCTGGTTCCCTGCCTTACAGATaGCTAATGTACTCTTGGGAG | + |
Preference number: 2 (lower is better) Translates to: QVFSVAWSELGYILGKSGSLPYR*LMYSWE Trigger: CTCCCAAGAGTACATTAGTCATCTGTAAGGCAGGGA...ACCAGATTTCCCCAGGATGTATCCTAGTTCTGACCAGGCCACAGAAAAGACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR-3UTR CCA 90 bp | CTGGTCCTTGGGCATTTACCAATGAAGACAGATTTTGGCCTGGCTGTGGAGATGTGGCTCTCTTCTCCATaGTTCATGGAGTGGATGATA | + |
Preference number: 2 (lower is better) Translates to: LVLGHLPMKTDFGLAVEMWLSSP*FMEWMI Trigger: TATCATCCACTCCATGAACCATGGAGAAGAGAGCCA...CATCTCCACAGCCAGGCCAAAATCTGTCTTCATTGGTAAATGCCCAAGGACCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR-3UTR CCA 90 bp | TGCACCTGGCTTTGGGCTGAGGAGTGTTTGCCACCCCAGATCCATAGCACTGCACCTTTATTGATCACCTaGCATAATCACATTATACCA | + |
Preference number: 2 (lower is better) Translates to: CTWLWAEECLPPQIHSTAPLLIT*HNHIIP Trigger: TGGTATAATGTGATTATGCCAGGTGATCAATAAAGG...TGCAGTGCTATGGATCTGGGGTGGCAAACACTCCTCAGCCCAAAGCCAGGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR CCA 72 bp | GGGCTCAAGAGTCACCAGAGTGTGGCAGCAGGGAGATaGCACCTTGAGGTGGGCTGGTGGAGGCTGGGCCTC | + |
Preference number: 3 (lower is better) Translates to: GLKSHQSVAAGR*HLEVGWWRLGL Trigger: GAGGCCCAGCCTCCACCAGCCCACCTCAAGGTGCCATCTCCCTGCTGCCACACTCTGGTGACTCTTGAGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR-3UTR CAA 90 bp | TGTGGTGTGAGCCTGGGTGAGCTGAGCTTCAGAGTCTCAAGCCCTTCCCTGCCTGGGCCTGGAAGGCACTaGGTGTGGACGTTGGGGCCT | + |
Preference number: 3 (lower is better) Translates to: CGVSLGELSFRVSSPSLPGPGRH*VWTLGP Trigger: AGGCCCCAACGTCCACACCAAGTGCCTTCCAGGCCC...AGGCAGGGAAGGGCTTGAGACTCTGAAGCTCAGCTCACCCAGGCTCACACCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR-3UTR CAA 90 bp | AGGCTGAGGAAAGGAACTCTTCCCGGCTCCTGCTGTGAGAAGGGATGGGCTGGAGGGCCTGGAAGGCACTaGGTGTGGACGTTGGGGCCT | + |
Preference number: 3 (lower is better) Translates to: RLRKGTLPGSCCEKGWAGGPGRH*VWTLGP Trigger: AGGCCCCAACGTCCACACCAAGTGCCTTCCAGGCCC...TCCAGCCCATCCCTTCTCACAGCAGGAGCCGGGAAGAGTTCCTTTCCTCAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR GCA 72 bp | TGGGCCGTAGTCTTGTTCAGCCTCTGGACTCAGCCCTaGACATGGACTCCGGCAGGTGCTAAGGACAGGGCC | + |
Preference number: 3 (lower is better) Translates to: WAVVLFSLWTQP*TWTPAGAKDRA Trigger: GGCCCTGTCCTTAGCACCTGCCGGAGTCCATGTGCAGGGCTGAGTCCAGAGGCTGAACAAGACTACGGCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR-3UTR CAA 90 bp | AGGCCAGCTGCACCTGGCTTTGGGCTGAGGAGTGTTTGCCACCCCAGATCCATAGTTGTCTCTGGGAGCTaGCTGGCCCACACTGCCTGC | + |
Preference number: 3 (lower is better) Translates to: RPAAPGFGLRSVCHPRSIVVSGS*LAHTAC Trigger: GCAGGCAGTGTGGGCCAGCAAGCTCCCAGAGACAAC...TATGGATCTGGGGTGGCAAACACTCCTCAGCCCAAAGCCAGGTGCAGCTGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR-3UTR CAA 90 bp | CCAGTTGCTTGGTGTGAGCCCATTCTTCCTCACTCACGATGGGCTGCAGTGCCTGGGGCACAGGCAGCCTaGGCAGTGCATCTTGGTGGG | + |
Preference number: 3 (lower is better) Translates to: PVAWCEPILPHSRWAAVPGAQAA*AVHLGG Trigger: CCCACCAAGATGCACTGCCAAGGCTGCCTGTGCCCC...AGGCACTGCAGCCCATCGTGAGTGAGGAAGAATGGGCTCACACCAAGCAACTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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3UTR GCA 72 bp | CACAGGTCAGTCAGGTCACGGAGCACTTCACAGGGGTaGCAGCCTCCCGGCCCCACATTCCAAGCACATATG | + |
Preference number: 3 (lower is better) Translates to: HRSVRSRSTSQG*QPPGPTFQAHM Trigger: CATATGTGCTTGGAATGTGGGGCCGGGAGGCTGGCACCCCTGTGAAGTGCTCCGTGACCTGACTGACCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR CCA 72 bp | TGCACATGGACTCCGGCAGGTGCTAAGGACAGGGCCTaGAAGGCACTTGGTGTGGACGTTGGGGCCTTGCTA | + |
Preference number: 3 (lower is better) Translates to: CTWTPAGAKDRA*KALGVDVGALL Trigger: TAGCAAGGCCCCAACGTCCACACCAAGTGCCTTCCAGGCCCTGTCCTTAGCACCTGCCGGAGTCCATGTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR CCA 72 bp | GTGGCAGCAGGGAGATGGCACCTTGAGGTGGGCTGGTaGAGGCTGGGCCTCAGATGTCCCTTTGGCTACAAA | + |
Preference number: 3 (lower is better) Translates to: VAAGRWHLEVGW*RLGLRCPFGYK Trigger: TTTGTAGCCAAAGGGACATCTGAGGCCCAGCCTCCACCAGCCCACCTCAAGGTGCCATCTCCCTGCTGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR CCA 72 bp | GTCCAGGGATTGCTGAAGTGGGGGCACAGGCAGCCTTaGCAGTGCATCTTGGTGGGCCTTGAAGCGACCAGA | + |
Preference number: 3 (lower is better) Translates to: VQGLLKWGHRQP*QCILVGLEATR Trigger: TCTGGTCGCTTCAAGGCCCACCAAGATGCACTGCCAAGGCTGCCTGTGCCCCCACTTCAGCAATCCCTGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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3UTR GCA 72 bp | TTGGCCAGGCTGAGGAAAGGAACTCTTCCCGGCTCCTaGTGTGAGAAGGGATGGGCTGGACTGGCTCTCTTC | + |
Preference number: 3 (lower is better) Translates to: LARLRKGTLPGS*CEKGWAGLALF Trigger: GAAGAGAGCCAGTCCAGCCCATCCCTTCTCACAGCAGGAGCCGGGAAGAGTTCCTTTCCTCAGCCTGGCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR GCA 72 bp | ACCACTCGGACAGCCAGTTCTCCATTTTCTTGGCCCTaGGCTCCAGTCCCTTCTGTAGGCGTTCCCCTACGC | + |
Preference number: 3 (lower is better) Translates to: TTRTASSPFSWP*APVPSVGVPLR Trigger: GCGTAGGGGAACGCCTACAGAAGGGACTGGAGCGCAGGGCCAAGAAAATGGAGAACTGGCTGTCCGAGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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3UTR CCA 72 bp | GTAGTCTTGTTCAGCCTCTGGACTCAGCCCTGCACATaGACTCCGGCAGGTGCTAAGGACAGGGCCTGGAAG | + |
Preference number: 3 (lower is better) Translates to: VVLFSLWTQPCT*TPAGAKDRAWK Trigger: CTTCCAGGCCCTGTCCTTAGCACCTGCCGGAGTCCATGTGCAGGGCTGAGTCCAGAGGCTGAACAAGACTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR-3UTR CAA 90 bp | AGCGGCTGTCCTCCCAGGAACTCAACTGGCAGCGTCTCATTGTCAATCATGGACCCTTGGCAGTGCATCTaGGTGGGCCTTGAAGCGACC | + |
Preference number: 3 (lower is better) Translates to: SGCPPRNSTGSVSLSIMDPWQCI*VGLEAT Trigger: GGTCGCTTCAAGGCCCACCAAGATGCACTGCCAAGG...GTCCATGATTGACAATGAGACGCTGCCAGTTGAGTTCCTGGGAGGACAGCCGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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3UTR TCA 72 bp | GGCCTGGCTGTGGAGATGACAAGAGATTGGCCAGGCTaGGGAAAGGAACTCTTCCCGGCTCCTGCTGTGAGA | + |
Preference number: 3 (lower is better) Translates to: GLAVEMTRDWPG*GKELFPAPAVR Trigger: TCTCACAGCAGGAGCCGGGAAGAGTTCCTTTCCTCAGCCTGGCCAATCTCTTGTCATCTCCACAGCCAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR TCA 72 bp | GCACAGGCAGCCTTGGCAGTGCATCTTGGTGGGCCTTaGAGCGACCAGAAACCTTCATCAAGGAGGAGGGCT | + |
Preference number: 3 (lower is better) Translates to: AQAALAVHLGGP*SDQKPSSRRRA Trigger: AGCCCTCCTCCTTGATGAAGGTTTCTGGTCGCTTCAAGGCCCACCAAGATGCACTGCCAAGGCTGCCTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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3UTR GCA 72 bp | TCACAGCTCAGCCTGAGGATGTTGTCTCTGGGAGCTTaGTGGCCCACACTGCCTGCTTGGATACAAGCTCCC | + |
Preference number: 3 (lower is better) Translates to: SQLSLRMLSLGA*WPTLPAWIQAP Trigger: GGGAGCTTGTATCCAAGCAGGCAGTGTGGGCCAGCAAGCTCCCAGAGACAACATCCTCAGGCTGAGCTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
||
3UTR GCA 72 bp | GGATTGCTGAAGTGGGGGCACAGGCAGCCTTGGCAGTaGATCTTGGTGGGCCTTGAAGCGACCAGAAACCTT | + |
Preference number: 3 (lower is better) Translates to: GLLKWGHRQPWQ*ILVGLEATRNL Trigger: AAGGTTTCTGGTCGCTTCAAGGCCCACCAAGATGCACTGCCAAGGCTGCCTGTGCCCCCACTTCAGCAATCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
||
3UTR CCA 72 bp | CAAGGAAGTGAGCCATGGCAAGTGTCCATCCCAAAGTaGGTTTGGCTGTGGAAGTGGCAGGTCTGGGCCTGG | + |
Preference number: 3 (lower is better) Translates to: QGSEPWQVSIPK*VWLWKWQVWAW Trigger: CCAGGCCCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCTCACTTCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 ENSMUST00000155790.8 |
||
3UTR CCA 72 bp | AGTGGGGGCACAGGCAGCCTTGGCAGTGCATCTTGGTaGGCCTTGAAGCGACCAGAAACCTTCATCAAGGAG | + |
Preference number: 3 (lower is better) Translates to: SGGTGSLGSASW*ALKRPETFIKE Trigger: CTCCTTGATGAAGGTTTCTGGTCGCTTCAAGGCCCACCAAGATGCACTGCCAAGGCTGCCTGTGCCCCCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
||
3UTR CCA 72 bp | GGATACAAGCTCCCTGAACCAGAGACAGGTAGAAAATaGCAGGGCCAGACATCTGCCCTGCTTGCCCCTCAG | + |
Preference number: 3 (lower is better) Translates to: GYKLPEPETGRK*QGQTSALLAPQ Trigger: CTGAGGGGCAAGCAGGGCAGATGTCTGGCCCTGCCATTTTCTACCTGTCTCTGGTTCAGGGAGCTTGTATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
||
3UTR CCA 72 bp | CCAGCCCACTTCCAGTCAGCATCTGTTTGTATTGACTaGGCTGCTAGTGTGTCCCTGCTCCATTGCCCCTCC | + |
Preference number: 3 (lower is better) Translates to: PAHFQSASVCID*AASVSLLHCPS Trigger: GGAGGGGCAATGGAGCAGGGACACACTAGCAGCCCAGTCAATACAAACAGATGCTGACTGGAAGTGGGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
||
3UTR CCA 72 bp | CAGTGCCTTGAGGTAATAGTCCAGGGATTGCTGAAGTaGGGGCACAGGCAGCCTTGGCAGTGCATCTTGGTG | + |
Preference number: 3 (lower is better) Translates to: QCLEVIVQGLLK*GHRQPWQCILV Trigger: CACCAAGATGCACTGCCAAGGCTGCCTGTGCCCCCACTTCAGCAATCCCTGGACTATTACCTCAAGGCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
||
3UTR-3UTR CAA 90 bp | CACAGGGGTGCCAGCCTCCCGGCCCCACATTCCAAGCACATATGTACCCAGGGGCACTTCTTCCCTTTATaGATCACCTGGCATAATCAC | + |
Preference number: 3 (lower is better) Translates to: HRGASLPAPHSKHICTQGHFFPL*ITWHNH Trigger: GTGATTATGCCAGGTGATCAATAAAGGGAAGAAGTG...CCCCTGGGTACATATGTGCTTGGAATGTGGGGCCGGGAGGCTGGCACCCCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
||
3UTR-3UTR CAA 90 bp | ATAGGCTGTCTTGAGCCACCACTCGGACAGCCAGTTCTCCATTTTCTTGGCCCTATCAAGGAGGAGGGCTaGAGGAGGCCCAGGGGTTTT | + |
Preference number: 3 (lower is better) Translates to: IGCLEPPLGQPVLHFLGPIKEEG*RRPRGF Trigger: AAAACCCCTGGGCCTCCTCAAGCCCTCCTCCTTGAT...AGGGCCAAGAAAATGGAGAACTGGCTGTCCGAGTGGTGGCTCAAGACAGCCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
||
3UTR TCA 72 bp | TCCTTGGCTCAATGCCTTAGTTGTCACAGCTCAGCCTaGGGATGTTGTCTCTGGGAGCTTGCTGGCCCACAC | + |
Preference number: 3 (lower is better) Translates to: SLAQCLSCHSSA*GCCLWELAGPH Trigger: GTGTGGGCCAGCAAGCTCCCAGAGACAACATCCTCAGGCTGAGCTGTGACAACTAAGGCATTGAGCCAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
||
3UTR TCA 72 bp | GGTAGTTTCATCCTATGTTGCAGGCCCTGCCTCAGGTaGCCACAGGTCAGTCAGGTCACGGAGCACTTCACA | + |
Preference number: 3 (lower is better) Translates to: GSFILCCRPCLR*PQVSQVTEHFT Trigger: TGTGAAGTGCTCCGTGACCTGACTGACCTGTGGTCACCTGAGGCAGGGCCTGCAACATAGGATGAAACTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
||
3UTR TCA 72 bp | CCCATTCTTCCTCACTCACGATGGGCTGCAGTGCCTTaGGGTAATAGTCCAGGGATTGCTGAAGTGGGGGCA | + |
Preference number: 3 (lower is better) Translates to: PILPHSRWAAVP*GNSPGIAEVGA Trigger: TGCCCCCACTTCAGCAATCCCTGGACTATTACCTCAAGGCACTGCAGCCCATCGTGAGTGAGGAAGAATGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
||
3UTR GCA 72 bp | GATGTTGTCTCTGGGAGCTTGCTGGCCCACACTGCCTaGTTGGATACAAGCTCCCTGAACCAGAGACAGGTA | + |
Preference number: 3 (lower is better) Translates to: DVVSGSLLAHTA*LDTSSLNQRQV Trigger: TACCTGTCTCTGGTTCAGGGAGCTTGTATCCAAGCAGGCAGTGTGGGCCAGCAAGCTCCCAGAGACAACATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
||
3UTR GCA 72 bp | GCGCACAGGCTGGCTTTCCTTTCCTGGCAGGTTATGTaGTACACCCTCTGGGTGGGAGTATATGGGAGATAC | + |
Preference number: 3 (lower is better) Translates to: AHRLAFLSWQVM*YTLWVGVYGRY Trigger: GTATCTCCCATATACTCCCACCCAGAGGGTGTAGCACATAACCTGCCAGGAAAGGAAAGCCAGCCTGTGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102855.8 |
||
3UTR CCA 72 bp | TTCCCGGCTCCTGCTGTGAGAAGGGATGGGCTGGACTaGCTCTCTTCTCCATGGTTCATGGAGTGGATGATA | + |
Preference number: 3 (lower is better) Translates to: FPAPAVRRDGLD*LSSPWFMEWMI Trigger: TATCATCCACTCCATGAACCATGGAGAAGAGAGCCAGTCCAGCCCATCCCTTCTCACAGCAGGAGCCGGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
||
3UTR-3UTR CAA 90 bp | CTTGGGGCCGGGCACACGGCAAGAAGACAGGATCTGATAATACTGGTTCATGCAGTAATAGTCCAGGGATaGCTGAAGTGGGGGCACAGG | + |
Preference number: 3 (lower is better) Translates to: LGAGHTARRQDLIILVHAVIVQG*LKWGHR Trigger: CCTGTGCCCCCACTTCAGCAATCCCTGGACTATTAC...TGCATGAACCAGTATTATCAGATCCTGTCTTCTTGCCGTGTGCCCGGCCCCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
||
3UTR GCA 72 bp | ACTCTGGTACATAGCTATGCCGCTATGTCTGGTCTGTaGTACTGTCAAAAACCCTCCCTCCCTGCCAGCCTG | + |
Preference number: 3 (lower is better) Translates to: TLVHSYAAMSGL*YCQKPSLPASL Trigger: CAGGCTGGCAGGGAGGGAGGGTTTTTGACAGTAGCACAGACCAGACATAGCGGCATAGCTATGTACCAGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102855.8 |
||
3UTR GCA 72 bp | GTGAGCCCATTCTTCCTCACTCACGATGGGCTGCAGTaGCTTGAGGTAATAGTCCAGGGATTGCTGAAGTGG | + |
Preference number: 3 (lower is better) Translates to: VSPFFLTHDGLQ*LEVIVQGLLKW Trigger: CCACTTCAGCAATCCCTGGACTATTACCTCAAGGCACTGCAGCCCATCGTGAGTGAGGAAGAATGGGCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
||
3UTR CCA 72 bp | TCCATGGTTCATGGAGTGGATGATACATTGGGAACCTaGGCCGTAGTCTTGTTCAGCCTCTGGACTCAGCCC | + |
Preference number: 3 (lower is better) Translates to: SMVHGVDDTLGT*AVVLFSLWTQP Trigger: GGGCTGAGTCCAGAGGCTGAACAAGACTACGGCCCAGGTTCCCAATGTATCATCCACTCCATGAACCATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
||
3UTR GCA 72 bp | CACGGCAAGAAGACAGGATCTGATAATACTGGTTCATaGACAGCGGCTGTCCTCCCAGGAACTCAACTGGCA | + |
Preference number: 3 (lower is better) Translates to: HGKKTGSDNTGS*TAAVLPGTQLA Trigger: TGCCAGTTGAGTTCCTGGGAGGACAGCCGCTGTGCATGAACCAGTATTATCAGATCCTGTCTTCTTGCCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
||
3UTR TCA 72 bp | TGGACTGGCTCTCTTCTCCATGGTTCATGGAGTGGATaGTACATTGGGAACCTGGGCCGTAGTCTTGTTCAG | + |
Preference number: 3 (lower is better) Translates to: WTGSLLHGSWSG*YIGNLGRSLVQ Trigger: CTGAACAAGACTACGGCCCAGGTTCCCAATGTATCATCCACTCCATGAACCATGGAGAAGAGAGCCAGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
||
3UTR TCA 72 bp | TTCCATATCCAACTCCACATGCATTGTCTGCCTCAGTaGGGAGACTTCTGCCTTAGAAGAACTGCCCGCCAC | + |
Preference number: 3 (lower is better) Translates to: FHIQLHMHCLPQ*GDFCLRRTARH Trigger: GTGGCGGGCAGTTCTTCTAAGGCAGAAGTCTCCTCACTGAGGCAGACAATGCATGTGGAGTTGGATATGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102855.8 |
||
3UTR CCA 72 bp | GCTGGTCCTTGGGCATTTACCAATGAAGACAGATTTTaGCCTGGCTGTGGAGATGACAAGAGATTGGCCAGG | + |
Preference number: 3 (lower is better) Translates to: AGPWAFTNEDRF*PGCGDDKRLAR Trigger: CCTGGCCAATCTCTTGTCATCTCCACAGCCAGGCCAAAATCTGTCTTCATTGGTAAATGCCCAAGGACCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
||
3UTR CCA 72 bp | CCCTCACTGATAGATAATCCTCCCACCGCTGGTCCTTaGGCATTTACCAATGAAGACAGATTTTGGCCTGGC | + |
Preference number: 3 (lower is better) Translates to: PSLIDNPPTAGP*AFTNEDRFWPG Trigger: GCCAGGCCAAAATCTGTCTTCATTGGTAAATGCCCAAGGACCAGCGGTGGGAGGATTATCTATCAGTGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR-3UTR CAA 90 bp | TCCAACTCCACATGCATTGTCTGCCTCAGTGAGGAGACTTCTGCCTTAGAAGAAGGAGATGACAAGAGATaGGCCAGGCTGAGGAAAGGA | + |
Preference number: 3 (lower is better) Translates to: SNSTCIVCLSEETSALEEGDDKR*ARLRKG Trigger: TCCTTTCCTCAGCCTGGCCAATCTCTTGTCATCTCC...TTCTTCTAAGGCAGAAGTCTCCTCACTGAGGCAGACAATGCATGTGGAGTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102855.8 |
||
3UTR-3UTR CAA 90 bp | AGAACTAGGATACATCCTGGGGAAATCTGGTTAGCCCCTGCTAGCACCCTGACTCAGCATCTGTTTGTATaGACTGGGCTGCTAGTGTGT | + |
Preference number: 3 (lower is better) Translates to: RTRIHPGEIWLAPASTLTQHLFV*TGLLVC Trigger: ACACACTAGCAGCCCAGTCAATACAAACAGATGCTG...AGTCAGGGTGCTAGCAGGGGCTAACCAGATTTCCCCAGGATGTATCCTAGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
||
3UTR-3UTR CAA 90 bp | ACAGGATCTGATAATACTGGTTCATGCACAGCGGCTGTCCTCCCAGGAACTCAAAAACTCATCCACCAGTaGCTTGGTGTGAGCCCATTC | + |
Preference number: 3 (lower is better) Translates to: TGSDNTGSCTAAVLPGTQKLIHQ*LGVSPF Trigger: GAATGGGCTCACACCAAGCAACTGGTGGATGAGTTT...TTGAGTTCCTGGGAGGACAGCCGCTGTGCATGAACCAGTATTATCAGATCCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
||
3UTR GCA 72 bp | TCTGCCCTTCACAAGGCTTCCATATCCAACTCCACATaGATTGTCTGCCTCAGTGAGGAGACTTCTGCCTTA | + |
Preference number: 3 (lower is better) Translates to: SALHKASISNST*IVCLSEETSAL Trigger: TAAGGCAGAAGTCTCCTCACTGAGGCAGACAATGCATGTGGAGTTGGATATGGAAGCCTTGTGAAGGGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102855.8 |
||
3UTR GCA 72 bp | CACAAGGCTTCCATATCCAACTCCACATGCATTGTCTaGCTCAGTGAGGAGACTTCTGCCTTAGAAGAACTG | + |
Preference number: 3 (lower is better) Translates to: HKASISNSTCIV*LSEETSALEEL Trigger: CAGTTCTTCTAAGGCAGAAGTCTCCTCACTGAGGCAGACAATGCATGTGGAGTTGGATATGGAAGCCTTGTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102855.8 |
||
3UTR TCA 72 bp | AAACTCTGGAGGCTGAGCATACATTACTTGAGCTTCTaGAAGGAGGCTCAGAGACAAGGATGTGGTAAGACC | + |
Preference number: 3 (lower is better) Translates to: KLWRLSIHYLSF*KEAQRQGCGKT Trigger: GGTCTTACCACATCCTTGTCTCTGAGCCTCCTTTCAGAAGCTCAAGTAATGTATGCTCAGCCTCCAGAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102855.8 |
||
3UTR TCA 72 bp | GAAAGGAGGCTCAGAGACAAGGATGTGGTAAGACCATaGAGTCACAGGCATTTCCAGGATATTTTTGTTCCC | + |
Preference number: 3 (lower is better) Translates to: ERRLRDKDVVRP*SHRHFQDIFVP Trigger: GGGAACAAAAATATCCTGGAAATGCCTGTGACTTCATGGTCTTACCACATCCTTGTCTCTGAGCCTCCTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102855.8 |
||
3UTR CCA 72 bp | TTTAGTTACAGTGGAGTTCAGGTCTTTTCTGTGGCCTaGTCAGAACTAGGATACATCCTGGGGAAATCTGGT | + |
Preference number: 3 (lower is better) Translates to: FSYSGVQVFSVA*SELGYILGKSG Trigger: ACCAGATTTCCCCAGGATGTATCCTAGTTCTGACCAGGCCACAGAAAAGACCTGAACTCCACTGTAACTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR TCA 90 bp | AGAGTGTGGCAGCAGGGAGATGGCACCTTGAGGTGGGCTGGTGGAGGCTGGGCCACGCCCCCTGAGGTCTaGAACTCATCCACCAGTTGC | + |
Preference number: 4 (lower is better) Translates to: RVWQQGDGTLRWAGGGWATPPEV*NSSTSC Trigger: GCAACTGGTGGATGAGTTTCAGACCTCAGGGGGCGT...GGCCCAGCCTCCACCAGCCCACCTCAAGGTGCCATCTCCCTGCTGCCACACTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
||
CDS-3UTR TCA 90 bp | CTCCGGCAGGTGCTAAGGACAGGGCCTGGAAGGCACTTGGTGTGGACGTTGGGGTCAGTGCGGCCCAGGTaGAACATGCGCAGAGAGGCA | + |
Preference number: 4 (lower is better) Translates to: LRQVLRTGPGRHLVWTLGSVRPR*NMRREA Trigger: TGCCTCTCTGCGCATGTTTCACCTGGGCCGCACTGA...CCCCAACGTCCACACCAAGTGCCTTCCAGGCCCTGTCCTTAGCACCTGCCGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR GCA 90 bp | GCAGCAGGGAGATGGCACCTTGAGGTGGGCTGGTGGAGGCTGGGCCTCAGATGTAGCGGATGGTGTCAGTaGGGCCCAGGTGAAACATGC | + |
Preference number: 4 (lower is better) Translates to: AAGRWHLEVGWWRLGLRCSGWCQ*GPGETC Trigger: GCATGTTTCACCTGGGCCGCACTGACACCATCCGCT...ACATCTGAGGCCCAGCCTCCACCAGCCCACCTCAAGGTGCCATCTCCCTGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
||
CDS-3UTR CCA 90 bp | CACAGGGGTGCCAGCCTCCCGGCCCCACATTCCAAGCACATATGTACCCAGGGGGGGCAGGATCACTCCTaGGCTGGAGTAGATGACCAC | + |
Preference number: 4 (lower is better) Translates to: HRGASLPAPHSKHICTQGGQDHS*AGVDDH Trigger: GTGGTCATCTACTCCAGCCCAGGAGTGATCCTGCCC...CCCCTGGGTACATATGTGCTTGGAATGTGGGGCCGGGAGGCTGGCACCCCTGTG 62% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | CAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGGCCTGGCCACTGAGTCCTGCTTaGGGCCGGGCACACGGCAAG | + |
Preference number: 4 (lower is better) Translates to: QVSIPKWVWLWKWQVWAWPLSPA*GRAHGK Trigger: CTTGCCGTGTGCCCGGCCCCAAGCAGGACTCAGTGG...CCAGGCCCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
||
CDS-3UTR TCA 90 bp | GCAGCAGGGAGATGGCACCTTGAGGTGGGCTGGTGGAGGCTGGGCCTCAGATGTCTGACACGGAGAAGTTaGTATGGGCCTCCATGGGGT | + |
Preference number: 4 (lower is better) Translates to: AAGRWHLEVGWWRLGLRCLTRRS*YGPPWG Trigger: ACCCCATGGAGGCCCATATCAACTTCTCCGTGTCAG...ACATCTGAGGCCCAGCCTCCACCAGCCCACCTCAAGGTGCCATCTCCCTGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | CATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGGCCACTGAGTCCTGCTTaGGGCCGGGCACACGGCAAG | + |
Preference number: 4 (lower is better) Translates to: HGKCPSQSGFGCGSGRSGPLSPA*GRAHGK Trigger: CTTGCCGTGTGCCCGGCCCCAAGCAGGACTCAGTGG...CCCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR TCA 90 bp | AGAAGAACTGCCCGCCACCAAGCTGATGACCAGAGGCCATGCAGCACTGAGTGCCTGGGCTGGAGTAGATaGCCACAGGCTGGCGGAACT | + |
Preference number: 4 (lower is better) Translates to: RRTARHQADDQRPCSTECLGWSR*PQAGGT Trigger: AGTTCCGCCAGCCTGTGGTCATCTACTCCAGCCCAG...GCACTCAGTGCTGCATGGCCTCTGGTCATCAGCTTGGTGGCGGGCAGTTCTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102855.8 |
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CDS-3UTR TCA 90 bp | GCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGGCCTGCGAGTCTATGGAGGCTaGGCGGATGGTGTCAGTGCG | + |
Preference number: 4 (lower is better) Translates to: ASVHPKVGLAVEVAGLGLRVYGG*ADGVSA Trigger: CGCACTGACACCATCCGCTCAGCCTCCATAGACTCG...CAGGCCCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 ENSMUST00000155790.8 |
||
CDS-3UTR GCA 90 bp | CAGGCCCTGCCTCAGGTGACCACAGGTCAGTCAGGTCACGGAGCACTTCACAGGAGGCAGCCTTGGCAGTaGATCTTGGTGGGCCTTGAA | + |
Preference number: 4 (lower is better) Translates to: QALPQVTTGQSGHGALHRRQPWQ*ILVGLE Trigger: TTCAAGGCCCACCAAGATGCACTGCCAAGGCTGCCT...CCTGTGAAGTGCTCCGTGACCTGACTGACCTGTGGTCACCTGAGGCAGGGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
||
CDS-3UTR GCA 90 bp | GCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGGCCTGTTCAGACCCAGCAGGTaGCGGTCAAAGGCCTCCCCT | + |
Preference number: 4 (lower is better) Translates to: ASVHPKVGLAVEVAGLGLFRPSR*RSKASP Trigger: AGGGGAGGCCTTTGACCGGCACCTGCTGGGTCTGAA...CAGGCCCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 ENSMUST00000155790.8 |
||
CDS-3UTR GCA 90 bp | AAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGGCCTGGGAGGTCCTCGATGGCCTaGAGCTTCAGACCCAGCAGG | + |
Preference number: 4 (lower is better) Translates to: KCPSQSGFGCGSGRSGPGRSSMA*SFRPSR Trigger: CCTGCTGGGTCTGAAGCTGCAGGCCATCGAGGACCT...CCCAGGCCCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 ENSMUST00000155790.8 |
||
CDS-3UTR TCA 90 bp | CAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGGCCTGGTCAAGGAGGAGGGCTTaGGGAGGCCCAGGGGTTTTA | + |
Preference number: 4 (lower is better) Translates to: QVSIPKWVWLWKWQVWAWSRRRA*GGPGVL Trigger: TAAAACCCCTGGGCCTCCTCAAGCCCTCCTCCTTGA...CCAGGCCCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
||
CDS-3UTR TCA 90 bp | GAGCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCCTGGGCTGGAGTAGATaGCCACAGGCTGGCGGAACT | + |
Preference number: 4 (lower is better) Translates to: EPWQVSIPKWVWLWKWQVLGWSR*PQAGGT Trigger: AGTTCCGCCAGCCTGTGGTCATCTACTCCAGCCCAG...GACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
||
CDS-3UTR TCA 90 bp | CCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGTCAGTGCGGCCCAGGTaGAACATGCGCAGAGAGGCA | + |
Preference number: 4 (lower is better) Translates to: PWQVSIPKWVWLWKWQVWSVRPR*NMRREA Trigger: TGCCTCTCTGCGCATGTTTCACCTGGGCCGCACTGA...CCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 ENSMUST00000155790.8 |
||
CDS-3UTR TCA 90 bp | GAGCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCCGAGTCTATGGAGGCTaGGCGGATGGTGTCAGTGCG | + |
Preference number: 4 (lower is better) Translates to: EPWQVSIPKWVWLWKWQVRVYGG*ADGVSA Trigger: CGCACTGACACCATCCGCTCAGCCTCCATAGACTCG...GACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 ENSMUST00000155790.8 |
||
CDS-3UTR TCA 90 bp | CAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGGCCTGGAGATGTCAGGCATGCTaGCCAGGTCCTCGATGGCCT | + |
Preference number: 4 (lower is better) Translates to: QVSIPKWVWLWKWQVWAWRCQAC*PGPRWP Trigger: AGGCCATCGAGGACCTGGTCAGCATGCCTGACATCT...CCAGGCCCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
||
CDS-3UTR GCA 90 bp | CAGGCCCTGCCTCAGGTGACCACAGGTCAGTCAGGTCACGGAGCACTTCACAGGCACGATGGGCTGCAGTaGCTTGAGGTAATAGTCCAG | + |
Preference number: 4 (lower is better) Translates to: QALPQVTTGQSGHGALHRHDGLQ*LEVIVQ Trigger: CTGGACTATTACCTCAAGGCACTGCAGCCCATCGTG...CCTGTGAAGTGCTCCGTGACCTGACTGACCTGTGGTCACCTGAGGCAGGGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR GCA 90 bp | AGGCCAGCTGCACCTGGCTTTGGGCTGAGGAGTGTTTGCCACCCCAGATCCATAAGCGGATGGTGTCAGTaGGGCCCAGGTGAAACATGC | + |
Preference number: 4 (lower is better) Translates to: RPAAPGFGLRSVCHPRSISGWCQ*GPGETC Trigger: GCATGTTTCACCTGGGCCGCACTGACACCATCCGCT...TATGGATCTGGGGTGGCAAACACTCCTCAGCCCAAAGCCAGGTGCAGCTGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR GCA 90 bp | TGCACCTGGCTTTGGGCTGAGGAGTGTTTGCCACCCCAGATCCATAGCACTGCAAGCAGCTCCACCTTCTaGTGCTCCGGCACTGTGGAG | + |
Preference number: 4 (lower is better) Translates to: CTWLWAEECLPPQIHSTASSSTF*CSGTVE Trigger: CTCCACAGTGCCGGAGCAGCAGAAGGTGGAGCTGCT...TGCAGTGCTATGGATCTGGGGTGGCAAACACTCCTCAGCCCAAAGCCAGGTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR GCA 90 bp | GCAGCAGGGAGATGGCACCTTGAGGTGGGCTGGTGGAGGCTGGGCCTCAGATGTTGGGGTTGTAGCAGATaGCATAACCATCTGGGACCA | + |
Preference number: 4 (lower is better) Translates to: AAGRWHLEVGWWRLGLRCWGCSR*HNHLGP Trigger: TGGTCCCAGATGGTTATGGCATCTGCTACAACCCCA...ACATCTGAGGCCCAGCCTCCACCAGCCCACCTCAAGGTGCCATCTCCCTGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | AGGCCAGCTGCACCTGGCTTTGGGCTGAGGAGTGTTTGCCACCCCAGATCCATAGGGCAGGATCACTCCTaGGCTGGAGTAGATGACCAC | + |
Preference number: 4 (lower is better) Translates to: RPAAPGFGLRSVCHPRSIGQDHS*AGVDDH Trigger: GTGGTCATCTACTCCAGCCCAGGAGTGATCCTGCCC...TATGGATCTGGGGTGGCAAACACTCCTCAGCCCAAAGCCAGGTGCAGCTGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | GGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGGCCTCCACAAAGTCCTGCTTaGGCAGGATCACTCCTGGGC | + |
Preference number: 4 (lower is better) Translates to: GKCPSQSGFGCGSGRSGPPQSPA*AGSLLG Trigger: GCCCAGGAGTGATCCTGCCCAAGCAGGACTTTGTGG...AGGCCCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | CGCACAGGCTGGCTTTCCTTTCCTGGCAGGTTATGTGCTACACCCTCTGGGTGGCCACAAAGTCCTGCTTaGGCAGGATCACTCCTGGGC | + |
Preference number: 4 (lower is better) Translates to: RTGWLSFPGRLCATPSGWPQSPA*AGSLLG Trigger: GCCCAGGAGTGATCCTGCCCAAGCAGGACTTTGTGG...CCACCCAGAGGGTGTAGCACATAACCTGCCAGGAAAGGAAAGCCAGCCTGTGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102855.8 |
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CDS-3UTR TCA 90 bp | GAGGTAGTTTCATCCTATGTTGCAGGCCCTGCCTCAGGTGACCACAGGTCAGTCGGAGATAGGCTGTCTTaGGCCACCACTCGGACAGCC | + |
Preference number: 4 (lower is better) Translates to: EVVSSYVAGPASGDHRSVGDRLS*ATTRTA Trigger: GGCTGTCCGAGTGGTGGCTCAAGACAGCCTATCTCC...GACTGACCTGTGGTCACCTGAGGCAGGGCCTGCAACATAGGATGAAACTACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR TCA 90 bp | GAAGTGAGCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCGGAGATAGGCTGTCTTaGGCCACCACTCGGACAGCC | + |
Preference number: 4 (lower is better) Translates to: EVSHGKCPSQSGFGCGSGGDRLS*ATTRTA Trigger: GGCTGTCCGAGTGGTGGCTCAAGACAGCCTATCTCC...GCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCTCACTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR TCA 90 bp | GCACATGGACTCCGGCAGGTGCTAAGGACAGGGCCTGGAAGGCACTTGGTGTGGCCAATACACCCTCGATaGGTTTGGCAGCAAACCGAA | + |
Preference number: 4 (lower is better) Translates to: AHGLRQVLRTGPGRHLVWPIHPR*VWQQTE Trigger: TTCGGTTTGCTGCCAAACTCATCGAGGGTGTATTGG...CCACACCAAGTGCCTTCCAGGCCCTGTCCTTAGCACCTGCCGGAGTCCATGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR TCA 90 bp | TGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGGCCCTGACACGGAGAAGTTaGTATGGGCCTCCATGGGGT | + |
Preference number: 4 (lower is better) Translates to: WQVSIPKWVWLWKWQVWALTRRS*YGPPWG Trigger: ACCCCATGGAGGCCCATATCAACTTCTCCGTGTCAG...GGCCCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 ENSMUST00000155790.8 |
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CDS-3UTR GCA 90 bp | GTGAGCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGAGCGGATGGTGTCAGTaGGGCCCAGGTGAAACATGC | + |
Preference number: 4 (lower is better) Translates to: VSHGKCPSQSGFGCGSGRSGWCQ*GPGETC Trigger: GCATGTTTCACCTGGGCCGCACTGACACCATCCGCT...CCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 ENSMUST00000155790.8 |
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CDS-3UTR GCA 90 bp | GGAAGTGAGCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGAGCAGCTCCACCTTCTaGTGCTCCGGCACTGTGGAG | + |
Preference number: 4 (lower is better) Translates to: GSEPWQVSIPKWVWLWKWSSSTF*CSGTVE Trigger: CTCCACAGTGCCGGAGCAGCAGAAGGTGGAGCTGCT...CCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCTCACTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 ENSMUST00000155790.8 |
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CDS-3UTR GCA 90 bp | GAAGTGAGCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGCAGCTCCACCTTCTaGTGCTCCGGCACTGTGGAG | + |
Preference number: 4 (lower is better) Translates to: EVSHGKCPSQSGFGCGSGSSSTF*CSGTVE Trigger: CTCCACAGTGCCGGAGCAGCAGAAGGTGGAGCTGCT...GCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCTCACTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 ENSMUST00000155790.8 |
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CDS-3UTR GCA 90 bp | AAGGTTGGGGACCTGATAGTGACAGCTCCTCCAGCCCACTTCCAGTCAGCATCTTTCAGACCCAGCAGGTaGCGGTCAAAGGCCTCCCCT | + |
Preference number: 4 (lower is better) Translates to: KVGDLIVTAPPAHFQSASFRPSR*RSKASP Trigger: AGGGGAGGCCTTTGACCGGCACCTGCTGGGTCTGAA...AGATGCTGACTGGAAGTGGGCTGGAGGAGCTGTCACTATCAGGTCCCCAACCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR GCA 90 bp | ACAGGTAGAAAATGGCAGGGCCAGACATCTGCCCTGCTTGCCCCTCAGCTGAATAGGTCCTCGATGGCCTaGAGCTTCAGACCCAGCAGG | + |
Preference number: 4 (lower is better) Translates to: TGRKWQGQTSALLAPQLNRSSMA*SFRPSR Trigger: CCTGCTGGGTCTGAAGCTGCAGGCCATCGAGGACCT...ATTCAGCTGAGGGGCAAGCAGGGCAGATGTCTGGCCCTGCCATTTTCTACCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | TGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGGCCCTTGGCAGTGCATCTTaGTGGGCCTTGAAGCGACCA | + |
Preference number: 4 (lower is better) Translates to: WQVSIPKWVWLWKWQVWALGSAS*WALKRP Trigger: TGGTCGCTTCAAGGCCCACCAAGATGCACTGCCAAG...GGCCCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | AGCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTCAGGGATTGCTGAAGTaGGGGCACAGGCAGCCTTGG | + |
Preference number: 4 (lower is better) Translates to: SHGKCPSQSGFGCGSGRSQGLLK*GHRQPW Trigger: CCAAGGCTGCCTGTGCCCCCACTTCAGCAATCCCTG...AGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | GCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGGCCTGGGTTGTTGTAGGCCTTaGCCCAGGTGTTTCGGTGGT | + |
Preference number: 4 (lower is better) Translates to: ASVHPKVGLAVEVAGLGLGCCRP*PRCFGG Trigger: ACCACCGAAACACCTGGGCCAAGGCCTACAACAACC...CAGGCCCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | GTCACAGCTCAGCCTGAGGATGTTGTCTCTGGGAGCTTGCTGGCCCACACTGCCCAGCTTCTTGGGCATTaGCAAGGGCACCATAGGAGA | + |
Preference number: 4 (lower is better) Translates to: VTAQPEDVVSGSLLAHTAQLLGH*QGHHRR Trigger: TCTCCTATGGTGCCCTTGCCAATGCCCAAGAAGCTG...GGCAGTGTGGGCCAGCAAGCTCCCAGAGACAACATCCTCAGGCTGAGCTGTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | CAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGGCCTGGGTCTTGGCAGGGACCTaGCTGGTAGAGAGGTTGAAG | + |
Preference number: 4 (lower is better) Translates to: QVSIPKWVWLWKWQVWAWVLAGT*LVERLK Trigger: CTTCAACCTCTCTACCAGCCAGGTCCCTGCCAAGAC...CCAGGCCCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | GGAAGTGAGCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGGGACCAGGTCCTCGATaGCCTGCAGCTTCAGACCCA | + |
Preference number: 4 (lower is better) Translates to: GSEPWQVSIPKWVWLWKWGPGPR*PAASDP Trigger: TGGGTCTGAAGCTGCAGGCCATCGAGGACCTGGTCC...CCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCTCACTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155790.8 |
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3UTR CAA 72 bp | GTCACAGCTCAGCCTGAGGATGTTGTCTCTGGGAGCTaGCTGGCCCACACTGCCTGCTTGGATACAAGCTCC | + |
Preference number: 4 (lower is better) Translates to: VTAQPEDVVSGS*LAHTACLDTSS Trigger: GGAGCTTGTATCCAAGCAGGCAGTGTGGGCCAGCAAGCTCCCAGAGACAACATCCTCAGGCTGAGCTGTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR CAA 72 bp | GAGGCCAGCTGCACCTGGCTTTGGGCTGAGGAGTGTTaGCCACCCCAGATCCATAGCACTGCACTAACCATG | + |
Preference number: 4 (lower is better) Translates to: EASCTWLWAEEC*PPQIHSTALTM Trigger: CATGGTTAGTGCAGTGCTATGGATCTGGGGTGGCAAACACTCCTCAGCCCAAAGCCAGGTGCAGCTGGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR CAA 72 bp | TTGAGCCACCACTCGGACAGCCAGTTCTCCATTTTCTaGGCCCTGCGCTCCAGTCCCTTCTGTAGGCGTTCC | + |
Preference number: 4 (lower is better) Translates to: LSHHSDSQFSIF*ALRSSPFCRRS Trigger: GGAACGCCTACAGAAGGGACTGGAGCGCAGGGCCAAGAAAATGGAGAACTGGCTGTCCGAGTGGTGGCTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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CDS-3UTR TCA 90 bp | AGTGAGCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGTCAAGGAGGAGGGCTTaGGGAGGCCCAGGGGTTTTA | + |
Preference number: 4 (lower is better) Translates to: SEPWQVSIPKWVWLWKWQSRRRA*GGPGVL Trigger: TAAAACCCCTGGGCCTCCTCAAGCCCTCCTCCTTGA...CTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR TCA 90 bp | TGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGGCCCATCTTGGTGGGCCTTaGAGCGACCAGAAACCTTCA | + |
Preference number: 4 (lower is better) Translates to: WQVSIPKWVWLWKWQVWAHLGGP*SDQKPS Trigger: TGAAGGTTTCTGGTCGCTTCAAGGCCCACCAAGATG...GGCCCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR TCA 90 bp | GAAGTGAGCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCACGCCCCCTGAGGTCTaGAACTCATCCACCAGTTGC | + |
Preference number: 4 (lower is better) Translates to: EVSHGKCPSQSGFGCGSGTPPEV*NSSTSC Trigger: GCAACTGGTGGATGAGTTTCAGACCTCAGGGGGCGT...GCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCTCACTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR TCA 90 bp | AAGGTTGGGGACCTGATAGTGACAGCTCCTCCAGCCCACTTCCAGTCAGCATCTTTCCCCTACGCCCCCTaGGGTCTGAAACTCATCCAC | + |
Preference number: 4 (lower is better) Translates to: KVGDLIVTAPPAHFQSASFPYAP*GLKLIH Trigger: GTGGATGAGTTTCAGACCTCAGGGGGCGTAGGGGAA...AGATGCTGACTGGAAGTGGGCTGGAGGAGCTGTCACTATCAGGTCCCCAACCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR TCA 90 bp | AAGGTTGGGGACCTGATAGTGACAGCTCCTCCAGCCCACTTCCAGTCAGCATCTAGATGTCAGGCATGCTaGCCAGGTCCTCGATGGCCT | + |
Preference number: 4 (lower is better) Translates to: KVGDLIVTAPPAHFQSASRCQAC*PGPRWP Trigger: AGGCCATCGAGGACCTGGTCAGCATGCCTGACATCT...AGATGCTGACTGGAAGTGGGCTGGAGGAGCTGTCACTATCAGGTCCCCAACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR GCA 90 bp | GGGAGCTTGCTGGCCCACACTGCCTGCTTGGATACAAGCTCCCTGAACCAGAGACCATTTTCTTGGCCCTaGGCTCCAGTCCCTTCTGTA | + |
Preference number: 4 (lower is better) Translates to: GSLLAHTACLDTSSLNQRPFSWP*APVPSV Trigger: TACAGAAGGGACTGGAGCGCAGGGCCAAGAAAATGG...TCTCTGGTTCAGGGAGCTTGTATCCAAGCAGGCAGTGTGGGCCAGCAAGCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR GCA 90 bp | AAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGGCCTGGGACAGGAGCCGTCTTCTaGCACGATGAACTGCAGTGT | + |
Preference number: 4 (lower is better) Translates to: KCPSQSGFGCGSGRSGPGTGAVF*HDELQC Trigger: ACACTGCAGTTCATCGTGGCAGAAGACGGCTCCTGT...CCCAGGCCCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | ATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGGCCTTGGCAGTGCATCTTaGTGGGCCTTGAAGCGACCA | + |
Preference number: 4 (lower is better) Translates to: MASVHPKVGLAVEVAGLGLGSAS*WALKRP Trigger: TGGTCGCTTCAAGGCCCACCAAGATGCACTGCCAAG...GCCCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | TCTGGGAGCTTGCTGGCCCACACTGCCTGCTTGGATACAAGCTCCCTGAACCAGAGTTCTCCATTTTCTTaGCCCTGCGCTCCAGTCCCT | + |
Preference number: 4 (lower is better) Translates to: SGSLLAHTACLDTSSLNQSSPFS*PCAPVP Trigger: AGGGACTGGAGCGCAGGGCCAAGAAAATGGAGAACT...CTGGTTCAGGGAGCTTGTATCCAAGCAGGCAGTGTGGGCCAGCAAGCTCCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | TGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGGCCAGGCACTTTCATACGTaGCACACGCCTGCCCATAGA | + |
Preference number: 4 (lower is better) Translates to: WQVSIPKWVWLWKWQVWARHFHT*HTPAHR Trigger: TCTATGGGCAGGCGTGTGCCACGTATGAAAGTGCCT...GGCCCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 ENSMUST00000155790.8 |
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3UTR CAA 72 bp | CTGAAGTGGGGGCACAGGCAGCCTTGGCAGTGCATCTaGGTGGGCCTTGAAGCGACCAGAAACCTTCATCAA | + |
Preference number: 4 (lower is better) Translates to: LKWGHRQPWQCI*VGLEATRNLHQ Trigger: TTGATGAAGGTTTCTGGTCGCTTCAAGGCCCACCAAGATGCACTGCCAAGGCTGCCTGTGCCCCCACTTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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CDS-3UTR TCA 90 bp | CCACCGCTGGTCCTTGGGCATTTACCAATGAAGACAGATTTTGGCCTGGCTGTGTTCCCCTACGCCCCCTaGGGTCTGAAACTCATCCAC | + |
Preference number: 4 (lower is better) Translates to: PPLVLGHLPMKTDFGLAVFPYAP*GLKLIH Trigger: GTGGATGAGTTTCAGACCTCAGGGGGCGTAGGGGAA...CACAGCCAGGCCAAAATCTGTCTTCATTGGTAAATGCCCAAGGACCAGCGGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR TCA 90 bp | GCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGCACAAAGATCTGATCTaGGGTGAGCGGTGTTCCGTC | + |
Preference number: 4 (lower is better) Translates to: AMASVHPKVGLAVEVAGLHKDLI*GERCSV Trigger: GACGGAACACCGCTCACCTCAGATCAGATCTTTGTG...CAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR GCA 90 bp | GAGCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCCACGATGGGCTGCAGTaGCTTGAGGTAATAGTCCAG | + |
Preference number: 4 (lower is better) Translates to: EPWQVSIPKWVWLWKWQVHDGLQ*LEVIVQ Trigger: CTGGACTATTACCTCAAGGCACTGCAGCCCATCGTG...GACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR GCA 90 bp | CCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGCCTTCTGCAGCTGCATaGTCATACACCATCCCACAG | + |
Preference number: 4 (lower is better) Translates to: PWQVSIPKWVWLWKWQVWPSAAA*SYTIPQ Trigger: CTGTGGGATGGTGTATGAGCATGCAGCTGCAGAAGG...CCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR GCA 90 bp | AAGGAAGTGAGCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTTTCAGACCCAGCAGGTaGCGGTCAAAGGCCTCCCCT | + |
Preference number: 4 (lower is better) Translates to: KEVSHGKCPSQSGFGCGSFRPSR*RSKASP Trigger: AGGGGAGGCCTTTGACCGGCACCTGCTGGGTCTGAA...ACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCTCACTTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 ENSMUST00000155790.8 |
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CDS-3UTR GCA 90 bp | TCTGGGAGCTTGCTGGCCCACACTGCCTGCTTGGATACAAGCTCCCTGAACCAGTGGGGTTGTAGCAGATaGCATAACCATCTGGGACCA | + |
Preference number: 4 (lower is better) Translates to: SGSLLAHTACLDTSSLNQWGCSR*HNHLGP Trigger: TGGTCCCAGATGGTTATGGCATCTGCTACAACCCCA...CTGGTTCAGGGAGCTTGTATCCAAGCAGGCAGTGTGGGCCAGCAAGCTCCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | AAGGTTGGGGACCTGATAGTGACAGCTCCTCCAGCCCACTTCCAGTCAGCATCTGGCAGTGCATCTTGGTaGGCCTTGAAGCGACCAGAA | + |
Preference number: 4 (lower is better) Translates to: KVGDLIVTAPPAHFQSASGSASW*ALKRPE Trigger: TTCTGGTCGCTTCAAGGCCCACCAAGATGCACTGCC...AGATGCTGACTGGAAGTGGGCTGGAGGAGCTGTCACTATCAGGTCCCCAACCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | GTGAGCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGGGTGTTCCGTCACTGTaGTACACATCCAGCTCGAAG | + |
Preference number: 4 (lower is better) Translates to: VSHGKCPSQSGFGCGSGRGVPSL*YTSSSK Trigger: CTTCGAGCTGGATGTGTACCACAGTGACGGAACACC...CCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
||
CDS-3UTR CCA 90 bp | AAGGTTGGGGACCTGATAGTGACAGCTCCTCCAGCCCACTTCCAGTCAGCATCTGGTTGTTGTAGGCCTTaGCCCAGGTGTTTCGGTGGT | + |
Preference number: 4 (lower is better) Translates to: KVGDLIVTAPPAHFQSASGCCRP*PRCFGG Trigger: ACCACCGAAACACCTGGGCCAAGGCCTACAACAACC...AGATGCTGACTGGAAGTGGGCTGGAGGAGCTGTCACTATCAGGTCCCCAACCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
||
3UTR CAA 72 bp | CTCCTCCAGCCCACTTCCAGTCAGCATCTGTTTGTATaGACTGGGCTGCTAGTGTGTCCCTGCTCCATTGCC | + |
Preference number: 4 (lower is better) Translates to: LLQPTSSQHLFV*TGLLVCPCSIA Trigger: GGCAATGGAGCAGGGACACACTAGCAGCCCAGTCAATACAAACAGATGCTGACTGGAAGTGGGCTGGAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR TCA 90 bp | GAGGTAGTTTCATCCTATGTTGCAGGCCCTGCCTCAGGTGACCACAGGTCAGTCTGTCCAGGCACACGGTaGAGATGCTCTTCTGTATGG | + |
Preference number: 4 (lower is better) Translates to: EVVSSYVAGPASGDHRSVCPGTR*RCSSVW Trigger: CCATACAGAAGAGCATCTTCACCGTGTGCCTGGACA...GACTGACCTGTGGTCACCTGAGGCAGGGCCTGCAACATAGGATGAAACTACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR TCA 90 bp | TCCAGTCAGCATCTGTTTGTATTGACTGGGCTGCTAGTGTGTCCCTGCTCCATTTCAGTGCGGCCCAGGTaGAACATGCGCAGAGAGGCA | + |
Preference number: 4 (lower is better) Translates to: SSQHLFVLTGLLVCPCSISVRPR*NMRREA Trigger: TGCCTCTCTGCGCATGTTTCACCTGGGCCGCACTGA...AATGGAGCAGGGACACACTAGCAGCCCAGTCAATACAAACAGATGCTGACTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
||
CDS-3UTR TCA 90 bp | CAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGGCCTGGACAGCTGTTGTAGGCTaGCACGGAGAAGTTGATATG | + |
Preference number: 4 (lower is better) Translates to: QVSIPKWVWLWKWQVWAWTAVVG*HGEVDM Trigger: CATATCAACTTCTCCGTGTCAGCCTACAACAGCTGT...CCAGGCCCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 ENSMUST00000155790.8 |
||
CDS-3UTR TCA 90 bp | CGCACAGGCTGGCTTTCCTTTCCTGGCAGGTTATGTGCTACACCCTCTGGGTGGACAGCTGTTGTAGGCTaGCACGGAGAAGTTGATATG | + |
Preference number: 4 (lower is better) Translates to: RTGWLSFPGRLCATPSGWTAVVG*HGEVDM Trigger: CATATCAACTTCTCCGTGTCAGCCTACAACAGCTGT...CCACCCAGAGGGTGTAGCACATAACCTGCCAGGAAAGGAAAGCCAGCCTGTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102855.8 |
||
CDS-3UTR GCA 90 bp | ACAGGTAGAAAATGGCAGGGCCAGACATCTGCCCTGCTTGCCCCTCAGCTGAATACAGGAGCCGTCTTCTaGCACGATGAACTGCAGTGT | + |
Preference number: 4 (lower is better) Translates to: TGRKWQGQTSALLAPQLNTGAVF*HDELQC Trigger: ACACTGCAGTTCATCGTGGCAGAAGACGGCTCCTGT...ATTCAGCTGAGGGGCAAGCAGGGCAGATGTCTGGCCCTGCCATTTTCTACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | TGGCTCAATGCCTTAGTTGTCACAGCTCAGCCTGAGGATGTTGTCTCTGGGAGCGGCAGTGCATCTTGGTaGGCCTTGAAGCGACCAGAA | + |
Preference number: 4 (lower is better) Translates to: WLNALVVTAQPEDVVSGSGSASW*ALKRPE Trigger: TTCTGGTCGCTTCAAGGCCCACCAAGATGCACTGCC...GCTCCCAGAGACAACATCCTCAGGCTGAGCTGTGACAACTAAGGCATTGAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | CAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGGCCTGGTCCCAGGAACTCAACTaGCAGCGTCTCATTGTCAAT | + |
Preference number: 4 (lower is better) Translates to: QVSIPKWVWLWKWQVWAWSQELN*QRLIVN Trigger: ATTGACAATGAGACGCTGCCAGTTGAGTTCCTGGGA...CCAGGCCCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | AAGGTTGGGGACCTGATAGTGACAGCTCCTCCAGCCCACTTCCAGTCAGCATCTAGGCACTTTCATACGTaGCACACGCCTGCCCATAGA | + |
Preference number: 4 (lower is better) Translates to: KVGDLIVTAPPAHFQSASRHFHT*HTPAHR Trigger: TCTATGGGCAGGCGTGTGCCACGTATGAAAGTGCCT...AGATGCTGACTGGAAGTGGGCTGGAGGAGCTGTCACTATCAGGTCCCCAACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | TGGCTCAATGCCTTAGTTGTCACAGCTCAGCCTGAGGATGTTGTCTCTGGGAGCGTCTTGGCAGGGACCTaGCTGGTAGAGAGGTTGAAG | + |
Preference number: 4 (lower is better) Translates to: WLNALVVTAQPEDVVSGSVLAGT*LVERLK Trigger: CTTCAACCTCTCTACCAGCCAGGTCCCTGCCAAGAC...GCTCCCAGAGACAACATCCTCAGGCTGAGCTGTGACAACTAAGGCATTGAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR TCA 90 bp | TGGCTCAATGCCTTAGTTGTCACAGCTCAGCCTGAGGATGTTGTCTCTGGGAGCTGGGCTGCAGTGCCTTaGGGTAATAGTCCAGGGATT | + |
Preference number: 4 (lower is better) Translates to: WLNALVVTAQPEDVVSGSWAAVP*GNSPGI Trigger: AATCCCTGGACTATTACCTCAAGGCACTGCAGCCCA...GCTCCCAGAGACAACATCCTCAGGCTGAGCTGTGACAACTAAGGCATTGAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
||
CDS-3UTR TCA 90 bp | ATGGAAGCAATAAGTCTGGGGCTCAAGAGTCACCAGAGTGTGGCAGCAGGGAGACACAAAGATCTGATCTaGGGTGAGCGGTGTTCCGTC | + |
Preference number: 4 (lower is better) Translates to: MEAISLGLKSHQSVAAGRHKDLI*GERCSV Trigger: GACGGAACACCGCTCACCTCAGATCAGATCTTTGTG...TCTCCCTGCTGCCACACTCTGGTGACTCTTGAGCCCCAGACTTATTGCTTCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR TCA 90 bp | ACAGGTAGAAAATGGCAGGGCCAGACATCTGCCCTGCTTGCCCCTCAGCTGAATAGCTGCACAAAGATCTaGTCTGAGGTGAGCGGTGTT | + |
Preference number: 4 (lower is better) Translates to: TGRKWQGQTSALLAPQLNSCTKI*SEVSGV Trigger: AACACCGCTCACCTCAGATCAGATCTTTGTGCAGCT...ATTCAGCTGAGGGGCAAGCAGGGCAGATGTCTGGCCCTGCCATTTTCTACCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR TCA 90 bp | TGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGGCCAAGTCCTTTCCAAAGTaGTGGAACGTCAGCATCATG | + |
Preference number: 4 (lower is better) Translates to: WQVSIPKWVWLWKWQVWAKSFPK*WNVSIM Trigger: CATGATGCTGACGTTCCATCACTTTGGAAAGGACTT...GGCCCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 ENSMUST00000155790.8 |
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CDS-3UTR TCA 90 bp | CAGAGTCTCAAGCCCTTCCCTGCCTTACAGATGACTAATGTACTCTTGGGAGCCCTGACACGGAGAAGTTaGTATGGGCCTCCATGGGGT | + |
Preference number: 4 (lower is better) Translates to: QSLKPFPALQMTNVLLGALTRRS*YGPPWG Trigger: ACCCCATGGAGGCCCATATCAACTTCTCCGTGTCAG...GGCTCCCAAGAGTACATTAGTCATCTGTAAGGCAGGGAAGGGCTTGAGACTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR TCA 90 bp | GCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGACAGCTGTTGTAGGCTaGCACGGAGAAGTTGATATG | + |
Preference number: 4 (lower is better) Translates to: AMASVHPKVGLAVEVAGLTAVVG*HGEVDM Trigger: CATATCAACTTCTCCGTGTCAGCCTACAACAGCTGT...CAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 ENSMUST00000155790.8 |
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CDS-3UTR GCA 90 bp | CAGAGTCTCAAGCCCTTCCCTGCCTTACAGATGACTAATGTACTCTTGGGAGCCAGGCAGCCTTGGCAGTaGATCTTGGTGGGCCTTGAA | + |
Preference number: 4 (lower is better) Translates to: QSLKPFPALQMTNVLLGARQPWQ*ILVGLE Trigger: TTCAAGGCCCACCAAGATGCACTGCCAAGGCTGCCT...GGCTCCCAAGAGTACATTAGTCATCTGTAAGGCAGGGAAGGGCTTGAGACTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR GCA 90 bp | TGGCTCAATGCCTTAGTTGTCACAGCTCAGCCTGAGGATGTTGTCTCTGGGAGCCCTTCTGCAGCTGCATaGTCATACACCATCCCACAG | + |
Preference number: 4 (lower is better) Translates to: WLNALVVTAQPEDVVSGSPSAAA*SYTIPQ Trigger: CTGTGGGATGGTGTATGAGCATGCAGCTGCAGAAGG...GCTCCCAGAGACAACATCCTCAGGCTGAGCTGTGACAACTAAGGCATTGAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR GCA 90 bp | GGAAGTGAGCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGTGGGGTTGTAGCAGATaGCATAACCATCTGGGACCA | + |
Preference number: 4 (lower is better) Translates to: GSEPWQVSIPKWVWLWKWWGCSR*HNHLGP Trigger: TGGTCCCAGATGGTTATGGCATCTGCTACAACCCCA...CCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCTCACTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 ENSMUST00000155790.8 |
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CDS-3UTR CCA 90 bp | AGCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTCATCCACCAGTTGCTTaGTGTGAGCCCATTCTTCCT | + |
Preference number: 4 (lower is better) Translates to: SHGKCPSQSGFGCGSGRSHPPVA*CEPILP Trigger: AGGAAGAATGGGCTCACACCAAGCAACTGGTGGATG...AGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | CCACCGCTGGTCCTTGGGCATTTACCAATGAAGACAGATTTTGGCCTGGCTGTGAGTTCTCCATTTTCTTaGCCCTGCGCTCCAGTCCCT | + |
Preference number: 4 (lower is better) Translates to: PPLVLGHLPMKTDFGLAVSSPFS*PCAPVP Trigger: AGGGACTGGAGCGCAGGGCCAAGAAAATGGAGAACT...CACAGCCAGGCCAAAATCTGTCTTCATTGGTAAATGCCCAAGGACCAGCGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | CAAGGAAGTGAGCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGGGTGTTCCGTCACTGTaGTACACATCCAGCTCGAAG | + |
Preference number: 4 (lower is better) Translates to: QGSEPWQVSIPKWVWLWKGVPSL*YTSSSK Trigger: CTTCGAGCTGGATGTGTACCACAGTGACGGAACACC...CTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCTCACTTCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | GGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGGCCTCAACAGGCTCTTTGTTaGATTGCAGTGAGGAATTCC | + |
Preference number: 4 (lower is better) Translates to: GKCPSQSGFGCGSGRSGPQQALC*IAVRNS Trigger: GGAATTCCTCACTGCAATCCAACAAAGAGCCTGTTG...AGGCCCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | GGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGGCCTTTAGCTTCTCGGACTTaGGGAAGTCCTTTCCAAAGT | + |
Preference number: 4 (lower is better) Translates to: GKCPSQSGFGCGSGRSGPLASRT*GSPFQS Trigger: ACTTTGGAAAGGACTTCCCCAAGTCCGAGAAGCTAA...AGGCCCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 ENSMUST00000155790.8 |
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3UTR CAA 72 bp | TTGAAGCGACCAGAAACCTTCATCAAGGAGGAGGGCTaGAGGAGGCCCAGGGGTTTTACCTGGTCTCCTTTA | + |
Preference number: 4 (lower is better) Translates to: LKRPETFIKEEG*RRPRGFTWSPL Trigger: TAAAGGAGACCAGGTAAAACCCCTGGGCCTCCTCAAGCCCTCCTCCTTGATGAAGGTTTCTGGTCGCTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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CDS-3UTR TCA 90 bp | AATCCAGGACAGGAAGGTGGCTCATTAGGGTTTGGCGACATCCTTGGCTCAATGCATCTTGGTGGGCCTTaGAGCGACCAGAAACCTTCA | + |
Preference number: 4 (lower is better) Translates to: NPGQEGGSLGFGDILGSMHLGGP*SDQKPS Trigger: TGAAGGTTTCTGGTCGCTTCAAGGCCCACCAAGATG...CATTGAGCCAAGGATGTCGCCAAACCCTAATGAGCCACCTTCCTGTCCTGGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR TCA 90 bp | CAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGGCCTGGTGTCAATCATGGACTTaGAATCCAATACACCCTCGA | + |
Preference number: 4 (lower is better) Translates to: QVSIPKWVWLWKWQVWAWCQSWT*NPIHPR Trigger: TCGAGGGTGTATTGGATTTCAAGTCCATGATTGACA...CCAGGCCCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR TCA 90 bp | GAGCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCAAGTCCTTTCCAAAGTaGTGGAACGTCAGCATCATG | + |
Preference number: 4 (lower is better) Translates to: EPWQVSIPKWVWLWKWQVKSFPK*WNVSIM Trigger: CATGATGCTGACGTTCCATCACTTTGGAAAGGACTT...GACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 ENSMUST00000155790.8 |
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CDS-3UTR CCA 90 bp | ACAGGTAGAAAATGGCAGGGCCAGACATCTGCCCTGCTTGCCCCTCAGCTGAATTCCCAGGAACTCAACTaGCAGCGTCTCATTGTCAAT | + |
Preference number: 4 (lower is better) Translates to: TGRKWQGQTSALLAPQLNSQELN*QRLIVN Trigger: ATTGACAATGAGACGCTGCCAGTTGAGTTCCTGGGA...ATTCAGCTGAGGGGCAAGCAGGGCAGATGTCTGGCCCTGCCATTTTCTACCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | AGGCTGAGGAAAGGAACTCTTCCCGGCTCCTGCTGTGAGAAGGGATGGGCTGGAGTATACTCCATGACATaGTCCACAAGTGCAACTATG | + |
Preference number: 4 (lower is better) Translates to: RLRKGTLPGSCCEKGWAGVYSMT*STSATM Trigger: CATAGTTGCACTTGTGGACCATGTCATGGAGTATAC...TCCAGCCCATCCCTTCTCACAGCAGGAGCCGGGAAGAGTTCCTTTCCTCAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | AAGGAAGTGAGCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTAGGCACTTTCATACGTaGCACACGCCTGCCCATAGA | + |
Preference number: 4 (lower is better) Translates to: KEVSHGKCPSQSGFGCGSRHFHT*HTPAHR Trigger: TCTATGGGCAGGCGTGTGCCACGTATGAAAGTGCCT...ACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCTCACTTCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 ENSMUST00000155790.8 |
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CDS-3UTR TCA 90 bp | TCCAGTCAGCATCTGTTTGTATTGACTGGGCTGCTAGTGTGTCCCTGCTCCATTTGTCCAGGCACACGGTaGAGATGCTCTTCTGTATGG | + |
Preference number: 4 (lower is better) Translates to: SSQHLFVLTGLLVCPCSICPGTR*RCSSVW Trigger: CCATACAGAAGAGCATCTTCACCGTGTGCCTGGACA...AATGGAGCAGGGACACACTAGCAGCCCAGTCAATACAAACAGATGCTGACTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR GCA 90 bp | TGTGGTGTGAGCCTGGGTGAGCTGAGCTTCAGAGTCTCAAGCCCTTCCCTGCCTGGCTCTTTGTTGGATTaGAGTGAGGAATTCCATATT | + |
Preference number: 4 (lower is better) Translates to: CGVSLGELSFRVSSPSLPGSLLD*SEEFHI Trigger: AATATGGAATTCCTCACTGCAATCCAACAAAGAGCC...AGGCAGGGAAGGGCTTGAGACTCTGAAGCTCAGCTCACCCAGGCTCACACCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | CAGAGTCTCAAGCCCTTCCCTGCCTTACAGATGACTAATGTACTCTTGGGAGCCCATCCACCAGTTGCTTaGTGTGAGCCCATTCTTCCT | + |
Preference number: 4 (lower is better) Translates to: QSLKPFPALQMTNVLLGAHPPVA*CEPILP Trigger: AGGAAGAATGGGCTCACACCAAGCAACTGGTGGATG...GGCTCCCAAGAGTACATTAGTCATCTGTAAGGCAGGGAAGGGCTTGAGACTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | GGAAGTGAGCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAACAGGCTCTTTGTTaGATTGCAGTGAGGAATTCC | + |
Preference number: 4 (lower is better) Translates to: GSEPWQVSIPKWVWLWKWQQALC*IAVRNS Trigger: GGAATTCCTCACTGCAATCCAACAAAGAGCCTGTTG...CCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCTCACTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | GGAGTTCAGGTCTTTTCTGTGGCCTGGTCAGAACTAGGATACATCCTGGGGAAACAGCTTCTTGGGCATTaGCAAGGGCACCATAGGAGA | + |
Preference number: 4 (lower is better) Translates to: GVQVFSVAWSELGYILGKQLLGH*QGHHRR Trigger: TCTCCTATGGTGCCCTTGCCAATGCCCAAGAAGCTG...TTTCCCCAGGATGTATCCTAGTTCTGACCAGGCCACAGAAAAGACCTGAACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | GGAAGTGAGCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGTTAGCTTCTCGGACTTaGGGAAGTCCTTTCCAAAGT | + |
Preference number: 4 (lower is better) Translates to: GSEPWQVSIPKWVWLWKWLASRT*GSPFQS Trigger: ACTTTGGAAAGGACTTCCCCAAGTCCGAGAAGCTAA...CCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCTCACTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 ENSMUST00000155790.8 |
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3UTR CAA 72 bp | GGCTGTCCTCCCAGGAACTCAACTGGCAGCGTCTCATaGTCAATCATGGACTTGAAATCCAATACACCCTCG | + |
Preference number: 4 (lower is better) Translates to: GCPPRNSTGSVS*SIMDLKSNTPS Trigger: CGAGGGTGTATTGGATTTCAAGTCCATGATTGACAATGAGACGCTGCCAGTTGAGTTCCTGGGAGGACAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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CDS-3UTR TCA 90 bp | GGAGTTCAGGTCTTTTCTGTGGCCTGGTCAGAACTAGGATACATCCTGGGGAAAAGCTGCACAAAGATCTaGTCTGAGGTGAGCGGTGTT | + |
Preference number: 4 (lower is better) Translates to: GVQVFSVAWSELGYILGKSCTKI*SEVSGV Trigger: AACACCGCTCACCTCAGATCAGATCTTTGTGCAGCT...TTTCCCCAGGATGTATCCTAGTTCTGACCAGGCCACAGAAAAGACCTGAACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR TCA 90 bp | TGCACCTGGCTTTGGGCTGAGGAGTGTTTGCCACCCCAGATCCATAGCACTGCATTTGTTGGATTGCAGTaGGGAATTCCATATTTTCTC | + |
Preference number: 4 (lower is better) Translates to: CTWLWAEECLPPQIHSTAFVGLQ*GIPYFL Trigger: GAGAAAATATGGAATTCCTCACTGCAATCCAACAAA...TGCAGTGCTATGGATCTGGGGTGGCAAACACTCCTCAGCCCAAAGCCAGGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR TCA 90 bp | AGAACTAGGATACATCCTGGGGAAATCTGGTTAGCCCCTGCTAGCACCCTGACTAAGTCCTTTCCAAAGTaGTGGAACGTCAGCATCATG | + |
Preference number: 4 (lower is better) Translates to: RTRIHPGEIWLAPASTLTKSFPK*WNVSIM Trigger: CATGATGCTGACGTTCCATCACTTTGGAAAGGACTT...AGTCAGGGTGCTAGCAGGGGCTAACCAGATTTCCCCAGGATGTATCCTAGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR TCA 90 bp | TGGGCTCAGTTTATTAGCACAACCATGGGATTTGATTGTCTCCTTGTTTCAGTCTGCCAACCCAGTGTCTaGCAGGGCAGTCCAGTTCAC | + |
Preference number: 4 (lower is better) Translates to: WAQFISTTMGFDCLLVSVCQPSV*QGSPVH Trigger: GTGAACTGGACTGCCCTGTCAGACACTGGGTTGGCA...GACTGAAACAAGGAGACAATCAAATCCCATGGTTGTGCTAATAAACTGAGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142096.2 |
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CDS-3UTR CCA 90 bp | AGAACTAGGATACATCCTGGGGAAATCTGGTTAGCCCCTGCTAGCACCCTGACTTTAGCTTCTCGGACTTaGGGAAGTCCTTTCCAAAGT | + |
Preference number: 4 (lower is better) Translates to: RTRIHPGEIWLAPASTLTLASRT*GSPFQS Trigger: ACTTTGGAAAGGACTTCCCCAAGTCCGAGAAGCTAA...AGTCAGGGTGCTAGCAGGGGCTAACCAGATTTCCCCAGGATGTATCCTAGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | ACAACCATGGGATTTGATTGTCTCCTTGTTTCAGTCTCCCTAGCATTAAAATGCGAAGGCGGGACGACTTaGAGGAGGGTCTCAGGTGCT | + |
Preference number: 4 (lower is better) Translates to: TTMGFDCLLVSVSLALKCEGGTT*RRVSGA Trigger: AGCACCTGAGACCCTCCTCCAAGTCGTCCCGCCTTC...GCATTTTAATGCTAGGGAGACTGAAACAAGGAGACAATCAAATCCCATGGTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142096.2 |
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CDS-3UTR TCA 90 bp | AAGGAAGTGAGCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTTGTCAATCATGGACTTaGAATCCAATACACCCTCGA | + |
Preference number: 4 (lower is better) Translates to: KEVSHGKCPSQSGFGCGSCQSWT*NPIHPR Trigger: TCGAGGGTGTATTGGATTTCAAGTCCATGATTGACA...ACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCTCACTTCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CCA 90 bp | AATCCAGGACAGGAAGGTGGCTCATTAGGGTTTGGCGACATCCTTGGCTCAATGGTATACTCCATGACATaGTCCACAAGTGCAACTATG | + |
Preference number: 4 (lower is better) Translates to: NPGQEGGSLGFGDILGSMVYSMT*STSATM Trigger: CATAGTTGCACTTGTGGACCATGTCATGGAGTATAC...CATTGAGCCAAGGATGTCGCCAAACCCTAATGAGCCACCTTCCTGTCCTGGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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3UTR CAA 72 bp | AAGCCCTTCCCTGCCTTACAGATGACTAATGTACTCTaGGGAGCCTGTCATTTAGTAGCAGTGACGTTAGCT | + |
Preference number: 4 (lower is better) Translates to: KPFPALQMTNVL*GACHLVAVTLA Trigger: AGCTAACGTCACTGCTACTAAATGACAGGCTCCCAAGAGTACATTAGTCATCTGTAAGGCAGGGAAGGGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR TCA 90 bp | CAGAGTCTCAAGCCCTTCCCTGCCTTACAGATGACTAATGTACTCTTGGGAGCCTTTGTTGGATTGCAGTaGGGAATTCCATATTTTCTC | + |
Preference number: 4 (lower is better) Translates to: QSLKPFPALQMTNVLLGAFVGLQ*GIPYFL Trigger: GAGAAAATATGGAATTCCTCACTGCAATCCAACAAA...GGCTCCCAAGAGTACATTAGTCATCTGTAAGGCAGGGAAGGGCTTGAGACTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR GCA 90 bp | GGAGATACACACTTACATGTGGGAAGCCTGCTGAAGCAGTTGGATTATAACTTCGGCTCTTTGTTGGATTaGAGTGAGGAATTCCATATT | + |
Preference number: 4 (lower is better) Translates to: GDTHLHVGSLLKQLDYNFGSLLD*SEEFHI Trigger: AATATGGAATTCCTCACTGCAATCCAACAAAGAGCC...GAAGTTATAATCCAACTGCTTCAGCAGGCTTCCCACATGTAAGTGTGTATCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102855.8 |
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CDS CCA 90 bp | GCAGCTTCAGACCCAGCAGGTGCCGGTCAAAGGCCTCCCCTCGGATaGCCTGTGGGTGGGAGATCCGGTCAGTGTAGGCTCGGTGGGCCT | + |
Preference number: 5 (lower is better) Translates to: AASDPAGAGQRPPLG*PVGGRSGQCRLGGP Trigger: AGGCCCACCGAGCCTACACTGACCGGATCTCCCACCCACAGGCCATCCGAGGGGAGGCCTTTGACCGGCACCTGCTGGGTCTGAAGCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154595.2 |
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CDS GCA 90 bp | GCTCGGTGGGCCTGCACAGCCTTCCGGAGCAGCTCCACCTTCTGCTaGTCCGGCACTGTGGAGTCACCCATGCCTTTGACAAAGGCCAGC | + |
Preference number: 5 (lower is better) Translates to: ARWACTAFRSSSTFC*SGTVESPMPLTKAS Trigger: GCTGGCCTTTGTCAAAGGCATGGGTGACTCCACAGTGCCGGAGCAGCAGAAGGTGGAGCTGCTCCGGAAGGCTGTGCAGGCCCACCGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 ENSMUST00000155790.8 |
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CDS GCA 90 bp | ATGCTGACCAGGTCCTCGATGGCCTGCAGCTTCAGACCCAGCAGGTaGCGGTCAAAGGCCTCCCCTCGGATGGCCTGTGGGTGGGAGATC | + |
Preference number: 5 (lower is better) Translates to: MLTRSSMACSFRPSR*RSKASPRMACGWEI Trigger: GATCTCCCACCCACAGGCCATCCGAGGGGAGGCCTTTGACCGGCACCTGCTGGGTCTGAAGCTGCAGGCCATCGAGGACCTGGTCAGCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154595.2 |
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CDS CCA 90 bp | GTTTTCTTGACCGTTGCTGGAGGCCCGCCCGTCTTGTCCCGTCCATaGCCCTGCTGGGCGAACTCACCACGGTTCTGGCAGCAAAGGCTA | + |
Preference number: 5 (lower is better) Translates to: VFLTVAGGPPVLSRP*PCWANSPRFWQQRL Trigger: TAGCCTTTGCTGCCAGAACCGTGGTGAGTTCGCCCAGCAGGGCCATGGACGGGACAAGACGGGCGGGCCTCCAGCAACGGTCAAGAAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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CDS-3UTR CAA 90 bp | CATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGGACCACTGAGTCCTGCTaGGGGCCGGGCACACGGCAA | + |
Preference number: 5 (lower is better) Translates to: HGKCPSQSGFGCGSGRSGTTESC*GPGTRQ Trigger: TTGCCGTGTGCCCGGCCCCAAGCAGGACTCAGTGGT...CCCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CAA 90 bp | GCACATGGACTCCGGCAGGTGCTAAGGACAGGGCCTGGAAGGCACTTGGTGTGGTTGAACCGCAGCTTCTaGGGCATTGGCAAGGGCACC | + |
Preference number: 5 (lower is better) Translates to: AHGLRQVLRTGPGRHLVWLNRSF*GIGKGT Trigger: GGTGCCCTTGCCAATGCCCAAGAAGCTGCGGTTCAA...CCACACCAAGTGCCTTCCAGGCCCTGTCCTTAGCACCTGCCGGAGTCCATGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS TCA 90 bp | GCTCCACCTTCTGCTGCTCCGGCACTGTGGAGTCACCCATGCCTTTaGCAAAGGCCAGCGAGTCTATGGAGGCTGAGCGGATGGTGTCAG | + |
Preference number: 5 (lower is better) Translates to: APPSAAPALWSHPCL*QRPASLWRLSGWCQ Trigger: CTGACACCATCCGCTCAGCCTCCATAGACTCGCTGGCCTTTGTCAAAGGCATGGGTGACTCCACAGTGCCGGAGCAGCAGAAGGTGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 ENSMUST00000155790.8 |
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CDS-3UTR CAA 90 bp | AGTGAGCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGACCACTGAGTCCTGCTaGGGGCCGGGCACACGGCAA | + |
Preference number: 5 (lower is better) Translates to: SEPWQVSIPKWVWLWKWQTTESC*GPGTRQ Trigger: TTGCCGTGTGCCCGGCCCCAAGCAGGACTCAGTGGT...CTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCTCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CAA 90 bp | ATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGGCGCCATGCGGGCAGCGTaGGTCTCAGCACAGCTGTTG | + |
Preference number: 5 (lower is better) Translates to: MASVHPKVGLAVEVAGLGAMRAA*VSAQLL Trigger: CAACAGCTGTGCTGAGACCAACGCTGCCCGCATGGC...GCCCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 ENSMUST00000155790.8 |
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CDS GCA 90 bp | GTAGGGTGCGCATGTCCAGCAGAGCTTTCTCCAAGTAGTGAGCCATaGGGGCAGCGTTGGTCTCAGCACAGCTGTTGTAGGCTGACACGG | + |
Preference number: 5 (lower is better) Translates to: VGCACPAELSPSSEP*GQRWSQHSCCRLTR Trigger: CCGTGTCAGCCTACAACAGCTGTGCTGAGACCAACGCTGCCCGCATGGCTCACTACTTGGAGAAAGCTCTGCTGGACATGCGCACCCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 ENSMUST00000155790.8 |
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CDS-3UTR CAA 90 bp | AAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGGCCTGGGATCAAGGAGGAGGGCTaGAGGAGGCCCAGGGGTTTT | + |
Preference number: 5 (lower is better) Translates to: KCPSQSGFGCGSGRSGPGIKEEG*RRPRGF Trigger: AAAACCCCTGGGCCTCCTCAAGCCCTCCTCCTTGAT...CCCAGGCCCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CAA 90 bp | CTCCGGCAGGTGCTAAGGACAGGGCCTGGAAGGCACTTGGTGTGGACGTTGGGGATGAACTGCAGTGTCTaGTCAAACCAGCGGTTGCCA | + |
Preference number: 5 (lower is better) Translates to: LRQVLRTGPGRHLVWTLGMNCSV*SNQRLP Trigger: TGGCAACCGCTGGTTTGACAAGACACTGCAGTTCAT...CCCCAACGTCCACACCAAGTGCCTTCCAGGCCCTGTCCTTAGCACCTGCCGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CAA 90 bp | GGGAGCTTGCTGGCCCACACTGCCTGCTTGGATACAAGCTCCCTGAACCAGAGATTGAACCGCAGCTTCTaGGGCATTGGCAAGGGCACC | + |
Preference number: 5 (lower is better) Translates to: GSLLAHTACLDTSSLNQRLNRSF*GIGKGT Trigger: GGTGCCCTTGCCAATGCCCAAGAAGCTGCGGTTCAA...TCTCTGGTTCAGGGAGCTTGTATCCAAGCAGGCAGTGTGGGCCAGCAAGCTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CAA 90 bp | GAGGTAGTTTCATCCTATGTTGCAGGCCCTGCCTCAGGTGACCACAGGTCAGTCGCCATGCGGGCAGCGTaGGTCTCAGCACAGCTGTTG | + |
Preference number: 5 (lower is better) Translates to: EVVSSYVAGPASGDHRSVAMRAA*VSAQLL Trigger: CAACAGCTGTGCTGAGACCAACGCTGCCCGCATGGC...GACTGACCTGTGGTCACCTGAGGCAGGGCCTGCAACATAGGATGAAACTACCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CAA 90 bp | CATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGGATCAAGGAGGAGGGCTaGAGGAGGCCCAGGGGTTTT | + |
Preference number: 5 (lower is better) Translates to: HGKCPSQSGFGCGSGRSGIKEEG*RRPRGF Trigger: AAAACCCCTGGGCCTCCTCAAGCCCTCCTCCTTGAT...CCCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CAA 90 bp | AGCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTCCTTGGCAGTGCATCTaGGTGGGCCTTGAAGCGACC | + |
Preference number: 5 (lower is better) Translates to: SHGKCPSQSGFGCGSGRSPWQCI*VGLEAT Trigger: GGTCGCTTCAAGGCCCACCAAGATGCACTGCCAAGG...AGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CAA 90 bp | CAGAGTCTCAAGCCCTTCCCTGCCTTACAGATGACTAATGTACTCTTGGGAGCCGGGGCACAGGCAGCCTaGGCAGTGCATCTTGGTGGG | + |
Preference number: 5 (lower is better) Translates to: QSLKPFPALQMTNVLLGAGAQAA*AVHLGG Trigger: CCCACCAAGATGCACTGCCAAGGCTGCCTGTGCCCC...GGCTCCCAAGAGTACATTAGTCATCTGTAAGGCAGGGAAGGGCTTGAGACTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CAA 90 bp | GCACATGGACTCCGGCAGGTGCTAAGGACAGGGCCTGGAAGGCACTTGGTGTGGAAACTCATCCACCAGTaGCTTGGTGTGAGCCCATTC | + |
Preference number: 5 (lower is better) Translates to: AHGLRQVLRTGPGRHLVWKLIHQ*LGVSPF Trigger: GAATGGGCTCACACCAAGCAACTGGTGGATGAGTTT...CCACACCAAGTGCCTTCCAGGCCCTGTCCTTAGCACCTGCCGGAGTCCATGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CAA 90 bp | TGTGGTGTGAGCCTGGGTGAGCTGAGCTTCAGAGTCTCAAGCCCTTCCCTGCCTACTCTAGGCACTTGCTaGTCCAGGCACACGGTGAAG | + |
Preference number: 5 (lower is better) Translates to: CGVSLGELSFRVSSPSLPTLGTC*SRHTVK Trigger: CTTCACCGTGTGCCTGGACAAGCAAGTGCCTAGAGT...AGGCAGGGAAGGGCTTGAGACTCTGAAGCTCAGCTCACCCAGGCTCACACCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CAA 90 bp | GTCACAGCTCAGCCTGAGGATGTTGTCTCTGGGAGCTTGCTGGCCCACACTGCCTGGCTGGTAGAGAGGTaGAAGTGCATAGCAATGGCG | + |
Preference number: 5 (lower is better) Translates to: VTAQPEDVVSGSLLAHTAWLVER*KCIAMA Trigger: CGCCATTGCTATGCACTTCAACCTCTCTACCAGCCA...GGCAGTGTGGGCCAGCAAGCTCCCAGAGACAACATCCTCAGGCTGAGCTGTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CAA 90 bp | GTGAGCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGGCTGACACGGAGAAGTaGATATGGGCCTCCATGGGG | + |
Preference number: 5 (lower is better) Translates to: VSHGKCPSQSGFGCGSGRADTEK*IWASMG Trigger: CCCCATGGAGGCCCATATCAACTTCTCCGTGTCAGC...CCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 ENSMUST00000155790.8 |
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CDS TCA 90 bp | GTGAGCCATGCGGGCAGCGTTGGTCTCAGCACAGCTGTTGTAGGCTaGCACGGAGAAGTTGATATGGGCCTCCATGGGGTTGTAGCAGAT | + |
Preference number: 5 (lower is better) Translates to: VSHAGSVGLSTAVVG*HGEVDMGLHGVVAD Trigger: ATCTGCTACAACCCCATGGAGGCCCATATCAACTTCTCCGTGTCAGCCTACAACAGCTGTGCTGAGACCAACGCTGCCCGCATGGCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 ENSMUST00000154595.2 ENSMUST00000155790.8 |
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CDS CCA 90 bp | TATGCAGTAAGGTGGTCCCAGAGGGTGACGGAAGGCGGGACGACTTaGAGGAGGGTCTCAGGTGCTGCCAGGACTCTTAGTAGAATCTCA | + |
Preference number: 5 (lower is better) Translates to: YAVRWSQRVTEGGTT*RRVSGAARTLSRIS Trigger: TGAGATTCTACTAAGAGTCCTGGCAGCACCTGAGACCCTCCTCCAAGTCGTCCCGCCTTCCGTCACCCTCTGGGACCACCTTACTGCATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142096.2 |
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CDS-3UTR CAA 90 bp | TGCACCTGGCTTTGGGCTGAGGAGTGTTTGCCACCCCAGATCCATAGCACTGCAACTCTAGGCACTTGCTaGTCCAGGCACACGGTGAAG | + |
Preference number: 5 (lower is better) Translates to: CTWLWAEECLPPQIHSTATLGTC*SRHTVK Trigger: CTTCACCGTGTGCCTGGACAAGCAAGTGCCTAGAGT...TGCAGTGCTATGGATCTGGGGTGGCAAACACTCCTCAGCCCAAAGCCAGGTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CAA 90 bp | GTCACAGCTCAGCCTGAGGATGTTGTCTCTGGGAGCTTGCTGGCCCACACTGCCCTTAGCTTCTCGGACTaGGGGAAGTCCTTTCCAAAG | + |
Preference number: 5 (lower is better) Translates to: VTAQPEDVVSGSLLAHTALSFSD*GKSFPK Trigger: CTTTGGAAAGGACTTCCCCAAGTCCGAGAAGCTAAG...GGCAGTGTGGGCCAGCAAGCTCCCAGAGACAACATCCTCAGGCTGAGCTGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CAA 90 bp | CAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGGCCTGGTGGCTGGTAGAGAGGTaGAAGTGCATAGCAATGGCG | + |
Preference number: 5 (lower is better) Translates to: QVSIPKWVWLWKWQVWAWWLVER*KCIAMA Trigger: CGCCATTGCTATGCACTTCAACCTCTCTACCAGCCA...CCAGGCCCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CAA 90 bp | TGCACCTGGCTTTGGGCTGAGGAGTGTTTGCCACCCCAGATCCATAGCACTGCAATGACACAGTCTGTCTaGGCAGGGACCTGGCTGGTA | + |
Preference number: 5 (lower is better) Translates to: CTWLWAEECLPPQIHSTAMTQSV*AGTWLV Trigger: TACCAGCCAGGTCCCTGCCAAGACAGACTGTGTCAT...TGCAGTGCTATGGATCTGGGGTGGCAAACACTCCTCAGCCCAAAGCCAGGTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CAA 90 bp | AGCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGCTGACACGGAGAAGTaGATATGGGCCTCCATGGGG | + |
Preference number: 5 (lower is better) Translates to: SHGKCPSQSGFGCGSGRSADTEK*IWASMG Trigger: CCCCATGGAGGCCCATATCAACTTCTCCGTGTCAGC...AGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 ENSMUST00000155790.8 |
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CDS-3UTR CAA 90 bp | GTGAGCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGATCTCAGGTGTGATGTaGAACCGCAGCTTCTTGGGC | + |
Preference number: 5 (lower is better) Translates to: VSHGKCPSQSGFGCGSGRISGVM*NRSFLG Trigger: GCCCAAGAAGCTGCGGTTCAACATCACACCTGAGAT...CCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CAA 90 bp | GAGCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCATCTCAGGTGTGATGTaGAACCGCAGCTTCTTGGGC | + |
Preference number: 5 (lower is better) Translates to: EPWQVSIPKWVWLWKWQVISGVM*NRSFLG Trigger: GCCCAAGAAGCTGCGGTTCAACATCACACCTGAGAT...GACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CAA 90 bp | CAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGGCCTGGCTTAGCTTCTCGGACTaGGGGAAGTCCTTTCCAAAG | + |
Preference number: 5 (lower is better) Translates to: QVSIPKWVWLWKWQVWAWLSFSD*GKSFPK Trigger: CTTTGGAAAGGACTTCCCCAAGTCCGAGAAGCTAAG...CCAGGCCCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 ENSMUST00000155790.8 |
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CDS-3UTR CAA 90 bp | GAAGTGAGCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCGAGTCACCCATGCCTTaGACAAAGGCCAGCGAGTCT | + |
Preference number: 5 (lower is better) Translates to: EVSHGKCPSQSGFGCGSGESPMP*TKASES Trigger: AGACTCGCTGGCCTTTGTCAAAGGCATGGGTGACTC...GCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCTCACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 ENSMUST00000155790.8 |
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CDS-3UTR CAA 90 bp | AGTGAGCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGAGTCACCCATGCCTTaGACAAAGGCCAGCGAGTCT | + |
Preference number: 5 (lower is better) Translates to: SEPWQVSIPKWVWLWKWQESPMP*TKASES Trigger: AGACTCGCTGGCCTTTGTCAAAGGCATGGGTGACTC...CTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCTCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 ENSMUST00000155790.8 |
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CDS-3UTR CAA 90 bp | CAAGGAAGTGAGCCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGATGACACAGTCTGTCTaGGCAGGGACCAGGTCCTCG | + |
Preference number: 5 (lower is better) Translates to: QGSEPWQVSIPKWVWLWKMTQSV*AGTRSS Trigger: CGAGGACCTGGTCCCTGCCAAGACAGACTGTGTCAT...CTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGGCTCACTTCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155790.8 |
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CDS-3UTR CAA 90 bp | CAGGTCTTTTCTGTGGCCTGGTCAGAACTAGGATACATCCTGGGGAAATCTGGTCCTTGGCAGTGCATCTaGGTGGGCCTTGAAGCGACC | + |
Preference number: 5 (lower is better) Translates to: QVFSVAWSELGYILGKSGPWQCI*VGLEAT Trigger: GGTCGCTTCAAGGCCCACCAAGATGCACTGCCAAGG...ACCAGATTTCCCCAGGATGTATCCTAGTTCTGACCAGGCCACAGAAAAGACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CAA 90 bp | TGGCTCAATGCCTTAGTTGTCACAGCTCAGCCTGAGGATGTTGTCTCTGGGAGCGAGTCACCCATGCCTTaGACAAAGGCCAGCGAGTCT | + |
Preference number: 5 (lower is better) Translates to: WLNALVVTAQPEDVVSGSESPMP*TKASES Trigger: AGACTCGCTGGCCTTTGTCAAAGGCATGGGTGACTC...GCTCCCAGAGACAACATCCTCAGGCTGAGCTGTGACAACTAAGGCATTGAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS TCA 90 bp | CAGCGTTGGTCTCAGCACAGCTGTTGTAGGCTGACACGGAGAAGTTaGTATGGGCCTCCATGGGGTTGTAGCAGATGCCATAACCATCTG | + |
Preference number: 5 (lower is better) Translates to: QRWSQHSCCRLTRRS*YGPPWGCSRCHNHL Trigger: CAGATGGTTATGGCATCTGCTACAACCCCATGGAGGCCCATATCAACTTCTCCGTGTCAGCCTACAACAGCTGTGCTGAGACCAACGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 ENSMUST00000154595.2 ENSMUST00000155790.8 |
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CDS-3UTR CAA 90 bp | GCAATAAGTCTGGGGCTCAAGAGTCACCAGAGTGTGGCAGCAGGGAGATGGCACCCAACAGGCTCTTTGTaGGATTGCAGTGAGGAATTC | + |
Preference number: 5 (lower is better) Translates to: AISLGLKSHQSVAAGRWHPTGSL*DCSEEF Trigger: GAATTCCTCACTGCAATCCAACAAAGAGCCTGTTGG...GTGCCATCTCCCTGCTGCCACACTCTGGTGACTCTTGAGCCCCAGACTTATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CAA 90 bp | CAGGTCTTTTCTGTGGCCTGGTCAGAACTAGGATACATCCTGGGGAAATCTGGTGCTGACACGGAGAAGTaGATATGGGCCTCCATGGGG | + |
Preference number: 5 (lower is better) Translates to: QVFSVAWSELGYILGKSGADTEK*IWASMG Trigger: CCCCATGGAGGCCCATATCAACTTCTCCGTGTCAGC...ACCAGATTTCCCCAGGATGTATCCTAGTTCTGACCAGGCCACAGAAAAGACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CAA 90 bp | CTGGTCCTTGGGCATTTACCAATGAAGACAGATTTTGGCCTGGCTGTGGAGATGGTAATAGTCCAGGGATaGCTGAAGTGGGGGCACAGG | + |
Preference number: 5 (lower is better) Translates to: LVLGHLPMKTDFGLAVEMVIVQG*LKWGHR Trigger: CCTGTGCCCCCACTTCAGCAATCCCTGGACTATTAC...CATCTCCACAGCCAGGCCAAAATCTGTCTTCATTGGTAAATGCCCAAGGACCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CAA 90 bp | ATGGAAGCAATAAGTCTGGGGCTCAAGAGTCACCAGAGTGTGGCAGCAGGGAGAAAACTCATCCACCAGTaGCTTGGTGTGAGCCCATTC | + |
Preference number: 5 (lower is better) Translates to: MEAISLGLKSHQSVAAGRKLIHQ*LGVSPF Trigger: GAATGGGCTCACACCAAGCAACTGGTGGATGAGTTT...TCTCCCTGCTGCCACACTCTGGTGACTCTTGAGCCCCAGACTTATTGCTTCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CAA 90 bp | AGGCTGAGGAAAGGAACTCTTCCCGGCTCCTGCTGTGAGAAGGGATGGGCTGGATTCTCTATGTCGTTCTaGATCTCAGGTGTGATGTTG | + |
Preference number: 5 (lower is better) Translates to: RLRKGTLPGSCCEKGWAGFSMSF*ISGVML Trigger: CAACATCACACCTGAGATCAAGAACGACATAGAGAA...TCCAGCCCATCCCTTCTCACAGCAGGAGCCGGGAAGAGTTCCTTTCCTCAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS CCA 90 bp | TGGGTGGTCTCTTTGACTTTAAGAAGTTCACCACTGAGTCCTGCTTaGGGCCGGGCACACGGCAAGAAGACAGGATCTGATAATACTGGT | + |
Preference number: 5 (lower is better) Translates to: WVVSLTLRSSPLSPA*GRAHGKKTGSDNTG Trigger: ACCAGTATTATCAGATCCTGTCTTCTTGCCGTGTGCCCGGCCCCAAGCAGGACTCAGTGGTGAACTTCTTAAAGTCAAAGAGACCACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 ENSMUST00000132981.9 |
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CDS-3UTR CAA 90 bp | TCCAACTCCACATGCATTGTCTGCCTCAGTGAGGAGACTTCTGCCTTAGAAGAAGTAATAGTCCAGGGATaGCTGAAGTGGGGGCACAGG | + |
Preference number: 5 (lower is better) Translates to: SNSTCIVCLSEETSALEEVIVQG*LKWGHR Trigger: CCTGTGCCCCCACTTCAGCAATCCCTGGACTATTAC...TTCTTCTAAGGCAGAAGTCTCCTCACTGAGGCAGACAATGCATGTGGAGTTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102855.8 |
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CDS-3UTR CAA 90 bp | ACTTGGTGTGGACGTTGGGGCCTTGCTAGAGAATGCTTTTCTGGCTCAAACTGGATGAACTGCAGTGTCTaGTCAAACCAGCGGTTGCCA | + |
Preference number: 5 (lower is better) Translates to: TWCGRWGLARECFSGSNWMNCSV*SNQRLP Trigger: TGGCAACCGCTGGTTTGACAAGACACTGCAGTTCAT...CCAGTTTGAGCCAGAAAAGCATTCTCTAGCAAGGCCCCAACGTCCACACCAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CAA 90 bp | CCATGGCAAGTGTCCATCCCAAAGTGGGTTTGGCTGTGGAAGTGGCAGGTCTGGTTCTCTATGTCGTTCTaGATCTCAGGTGTGATGTTG | + |
Preference number: 5 (lower is better) Translates to: PWQVSIPKWVWLWKWQVWFSMSF*ISGVML Trigger: CAACATCACACCTGAGATCAAGAACGACATAGAGAA...CCAGACCTGCCACTTCCACAGCCAAACCCACTTTGGGATGGACACTTGCCATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CAA 90 bp | AGATGTCCCTTTGGCTACAAAGACTTAACCCTTAGCTATGGGGAGGTTGAGAGCATGACACAGTCTGTCTaGGCAGGGACCTGGCTGGTA | + |
Preference number: 5 (lower is better) Translates to: RCPFGYKDLTLSYGEVESMTQSV*AGTWLV Trigger: TACCAGCCAGGTCCCTGCCAAGACAGACTGTGTCAT...GCTCTCAACCTCCCCATAGCTAAGGGTTAAGTCTTTGTAGCCAAAGGGACATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS GCA 90 bp | TGTTGTAGGCCTTGGCCCAGGTGTTTCGGTGGTTGGAGGTTAGGATaGCAACAGGCTCTTTGTTGGATTGCAGTGAGGAATTCCATATTT | + |
Preference number: 5 (lower is better) Translates to: CCRPWPRCFGGWRLG*QQALCWIAVRNSIF Trigger: AAATATGGAATTCCTCACTGCAATCCAACAAAGAGCCTGTTGGCATCCTAACCTCCAACCACCGAAACACCTGGGCCAAGGCCTACAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS TCA 90 bp | GATTGCAGTGAGGAATTCCATATTTTCTCTAGCTGCACAAAGATCTaGTCTGAGGTGAGCGGTGTTCCGTCACTGTGGTACACATCCAGC | + |
Preference number: 5 (lower is better) Translates to: DCSEEFHIFSSCTKI*SEVSGVPSLWYTSS Trigger: GCTGGATGTGTACCACAGTGACGGAACACCGCTCACCTCAGATCAGATCTTTGTGCAGCTAGAGAAAATATGGAATTCCTCACTGCAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS-3UTR CAA 90 bp | TCCAACTCCACATGCATTGTCTGCCTCAGTGAGGAGACTTCTGCCTTAGAAGAACCAACAGGCTCTTTGTaGGATTGCAGTGAGGAATTC | + |
Preference number: 5 (lower is better) Translates to: SNSTCIVCLSEETSALEEPTGSL*DCSEEF Trigger: GAATTCCTCACTGCAATCCAACAAAGAGCCTGTTGG...TTCTTCTAAGGCAGAAGTCTCCTCACTGAGGCAGACAATGCATGTGGAGTTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102855.8 |
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CDS-3UTR CAA 90 bp | CTGGTCCTTGGGCATTTACCAATGAAGACAGATTTTGGCCTGGCTGTGGAGATGATGCTGAGGTTCTGTTaGGCTTTCTCTATGTCGTTC | + |
Preference number: 5 (lower is better) Translates to: LVLGHLPMKTDFGLAVEMMLRFC*AFSMSF Trigger: GAACGACATAGAGAAAGCCAAACAGAACCTCAGCAT...CATCTCCACAGCCAGGCCAAAATCTGTCTTCATTGGTAAATGCCCAAGGACCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS-3UTR CAA 90 bp | CAGGTCTTTTCTGTGGCCTGGTCAGAACTAGGATACATCCTGGGGAAATCTGGTATGCTGAGGTTCTGTTaGGCTTTCTCTATGTCGTTC | + |
Preference number: 5 (lower is better) Translates to: QVFSVAWSELGYILGKSGMLRFC*AFSMSF Trigger: GAACGACATAGAGAAAGCCAAACAGAACCTCAGCAT...ACCAGATTTCCCCAGGATGTATCCTAGTTCTGACCAGGCCACAGAAAAGACCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS TCA 90 bp | AGGAATTCCATATTTTCTCTAGCTGCACAAAGATCTGATCTGAGGTaGGCGGTGTTCCGTCACTGTGGTACACATCCAGCTCGAAGAACT | + |
Preference number: 5 (lower is better) Translates to: RNSIFSLAAQRSDLR*AVFRHCGTHPARRT Trigger: AGTTCTTCGAGCTGGATGTGTACCACAGTGACGGAACACCGCTCACCTCAGATCAGATCTTTGTGCAGCTAGAGAAAATATGGAATTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS TCA 90 bp | CTTGTCCAGGCACACGGTGAAGATGCTCTTCTGTATGGAGTTCACTaGCTCTCGGTTAACTTTGTCTTTAATGAGGTTGTTGTAGGCCTT | + |
Preference number: 5 (lower is better) Translates to: LVQAHGEDALLYGVH*LSVNFVFNEVVVGL Trigger: AAGGCCTACAACAACCTCATTAAAGACAAAGTTAACCGAGAGTCAGTGAACTCCATACAGAAGAGCATCTTCACCGTGTGCCTGGACAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS CCA 90 bp | AGGTGTTTCGGTGGTTGGAGGTTAGGATGCCAACAGGCTCTTTGTTaGATTGCAGTGAGGAATTCCATATTTTCTCTAGCTGCACAAAGA | + |
Preference number: 5 (lower is better) Translates to: RCFGGWRLGCQQALC*IAVRNSIFSLAAQR Trigger: TCTTTGTGCAGCTAGAGAAAATATGGAATTCCTCACTGCAATCCAACAAAGAGCCTGTTGGCATCCTAACCTCCAACCACCGAAACACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS-3UTR CAA 90 bp | TATATGGGAGATACACACTTACATGTGGGAAGCCTGCTGAAGCAGTTGGATTATCTTAGCTTCTCGGACTaGGGGAAGTCCTTTCCAAAG | + |
Preference number: 5 (lower is better) Translates to: YMGDTHLHVGSLLKQLDYLSFSD*GKSFPK Trigger: CTTTGGAAAGGACTTCCCCAAGTCCGAGAAGCTAAG...ATAATCCAACTGCTTCAGCAGGCTTCCCACATGTAAGTGTGTATCTCCCATATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102855.8 |
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CDS GCA 72 bp | GCTGGAGGCCCGCCCGTCTTGTCCCGTCCATGGCCCTaGTGGGCGAACTCACCACGGTTCTGGCAGCAAAGG | + |
Preference number: 6 (lower is better) Translates to: AGGPPVLSRPWP*WANSPRFWQQR Trigger: CCTTTGCTGCCAGAACCGTGGTGAGTTCGCCCAGCAGGGCCATGGACGGGACAAGACGGGCGGGCCTCCAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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CDS CCA 72 bp | ACCGTTGCTGGAGGCCCGCCCGTCTTGTCCCGTCCATaGCCCTGCTGGGCGAACTCACCACGGTTCTGGCAG | + |
Preference number: 6 (lower is better) Translates to: TVAGGPPVLSRP*PCWANSPRFWQ Trigger: CTGCCAGAACCGTGGTGAGTTCGCCCAGCAGGGCCATGGACGGGACAAGACGGGCGGGCCTCCAGCAACGGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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CDS GCA 72 bp | AGGTCCTCGATGGCCTGCAGCTTCAGACCCAGCAGGTaGCGGTCAAAGGCCTCCCCTCGGATGGCCCGGTCA | + |
Preference number: 6 (lower is better) Translates to: RSSMACSFRPSR*RSKASPRMARS Trigger: TGACCGGGCCATCCGAGGGGAGGCCTTTGACCGGCACCTGCTGGGTCTGAAGCTGCAGGCCATCGAGGACCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 ENSMUST00000155790.8 |
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CDS GCA 72 bp | AGGTCCTCGATGGCCTGCAGCTTCAGACCCAGCAGGTaGCGGTCAAAGGCCTCCCCTCGGATGGCCTGTGGG | + |
Preference number: 6 (lower is better) Translates to: RSSMACSFRPSR*RSKASPRMACG Trigger: CCCACAGGCCATCCGAGGGGAGGCCTTTGACCGGCACCTGCTGGGTCTGAAGCTGCAGGCCATCGAGGACCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154595.2 |
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CDS CCA 72 bp | GACCCAGCAGGTGCCGGTCAAAGGCCTCCCCTCGGATaGCCTGTGGGTGGGAGATCCGGTCAGTGTAGGCTC | + |
Preference number: 6 (lower is better) Translates to: DPAGAGQRPPLG*PVGGRSGQCRL Trigger: GAGCCTACACTGACCGGATCTCCCACCCACAGGCCATCCGAGGGGAGGCCTTTGACCGGCACCTGCTGGGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154595.2 |
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CDS CCA 72 bp | GGAGGCCCGCCCGTCTTGTCCCGTCCATGGCCCTGCTaGGCGAACTCACCACGGTTCTGGCAGCAAAGGCTA | + |
Preference number: 6 (lower is better) Translates to: GGPPVLSRPWPC*ANSPRFWQQRL Trigger: TAGCCTTTGCTGCCAGAACCGTGGTGAGTTCGCCCAGCAGGGCCATGGACGGGACAAGACGGGCGGGCCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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CDS CAA 72 bp | GGGGTTTTCTTGACCGTTGCTGGAGGCCCGCCCGTCTaGTCCCGTCCATGGCCCTGCTGGGCGAACTCACCA | + |
Preference number: 6 (lower is better) Translates to: GVFLTVAGGPPV*SRPWPCWANSP Trigger: TGGTGAGTTCGCCCAGCAGGGCCATGGACGGGACAAGACGGGCGGGCCTCCAGCAACGGTCAAGAAAACCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156702.2 |
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CDS GCA 72 bp | TGGGCCTGCACAGCCTTCCGGAGCAGCTCCACCTTCTaGTGCTCCGGCACTGTGGAGTCACCCATGCCTTTG | + |
Preference number: 6 (lower is better) Translates to: WACTAFRSSSTF*CSGTVESPMPL Trigger: CAAAGGCATGGGTGACTCCACAGTGCCGGAGCAGCAGAAGGTGGAGCTGCTCCGGAAGGCTGTGCAGGCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 ENSMUST00000155790.8 |
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CDS CCA 72 bp | AGGTGGTCCCAGAGGGTGACGGAAGGCGGGACGACTTaGAGGAGGGTCTCAGGTGCTGCCAGGACTCTTAGT | + |
Preference number: 6 (lower is better) Translates to: RWSQRVTEGGTT*RRVSGAARTLS Trigger: ACTAAGAGTCCTGGCAGCACCTGAGACCCTCCTCCAAGTCGTCCCGCCTTCCGTCACCCTCTGGGACCACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142096.2 |
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CDS TCA 72 bp | TCTGCTGCTCCGGCACTGTGGAGTCACCCATGCCTTTaGCAAAGGCCAGCGAGTCTATGGAGGCTGAGCGGA | + |
Preference number: 6 (lower is better) Translates to: SAAPALWSHPCL*QRPASLWRLSG Trigger: TCCGCTCAGCCTCCATAGACTCGCTGGCCTTTGTCAAAGGCATGGGTGACTCCACAGTGCCGGAGCAGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 ENSMUST00000155790.8 |
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CDS GCA 72 bp | CCAGCGAGTCTATGGAGGCTGAGCGGATGGTGTCAGTaGGGCCCAGGTGAAACATGCGCAGAGAGGCACTTT | + |
Preference number: 6 (lower is better) Translates to: PASLWRLSGWCQ*GPGETCAERHF Trigger: AAAGTGCCTCTCTGCGCATGTTTCACCTGGGCCGCACTGACACCATCCGCTCAGCCTCCATAGACTCGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 ENSMUST00000155790.8 |
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CDS CAA 90 bp | AGCTCCACCTTCTGCTGCTCCGGCACTGTGGAGTCACCCATGCCTTaGACAAAGGCCAGCGAGTCTATGGAGGCTGAGCGGATGGTGTCA | + |
Preference number: 6 (lower is better) Translates to: SSTFCCSGTVESPMP*TKASESMEAERMVS Trigger: TGACACCATCCGCTCAGCCTCCATAGACTCGCTGGCCTTTGTCAAAGGCATGGGTGACTCCACAGTGCCGGAGCAGCAGAAGGTGGAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 ENSMUST00000155790.8 |
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CDS CAA 90 bp | TGGTGGGCCTTGAAGCGACCAGAAACCTTCATCAAGGAGGAGGGCTaGAGGAGGCCCAGGGGTTTTACCACGGTTCTGGCAGCAAAGGCT | + |
Preference number: 6 (lower is better) Translates to: WWALKRPETFIKEEG*RRPRGFTTVLAAKA Trigger: AGCCTTTGCTGCCAGAACCGTGGTAAAACCCCTGGGCCTCCTCAAGCCCTCCTCCTTGATGAAGGTTTCTGGTCGCTTCAAGGCCCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS CAA 90 bp | TGGTGGGCCTTGAAGCGACCAGAAACCTTCATCAAGGAGGAGGGCTaGAGGAGGCCCAGGGGTTTTACCTTCTCTCTCTGCTGCTCGTCC | + |
Preference number: 6 (lower is better) Translates to: WWALKRPETFIKEEG*RRPRGFTFSLCCSS Trigger: GGACGAGCAGCAGAGAGAGAAGGTAAAACCCCTGGGCCTCCTCAAGCCCTCCTCCTTGATGAAGGTTTCTGGTCGCTTCAAGGCCCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132981.9 ENSMUST00000134120.2 |
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CDS GCA 72 bp | GCATGTCCAGCAGAGCTTTCTCCAAGTAGTGAGCCATaGGGGCAGCGTTGGTCTCAGCACAGCTGTTGTAGG | + |
Preference number: 6 (lower is better) Translates to: ACPAELSPSSEP*GQRWSQHSCCR Trigger: CCTACAACAGCTGTGCTGAGACCAACGCTGCCCGCATGGCTCACTACTTGGAGAAAGCTCTGCTGGACATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 ENSMUST00000155790.8 |
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CDS CCA 72 bp | CTCAGGTGTGATGTTGAACCGCAGCTTCTTGGGCATTaGCAAGGGCACCATAGGAGACCGCACAAGCTCAGG | + |
Preference number: 6 (lower is better) Translates to: LRCDVEPQLLGH*QGHHRRPHKLR Trigger: CCTGAGCTTGTGCGGTCTCCTATGGTGCCCTTGCCAATGCCCAAGAAGCTGCGGTTCAACATCACACCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS CCA 72 bp | GAGCTTTCTCCAAGTAGTGAGCCATGCGGGCAGCGTTaGTCTCAGCACAGCTGTTGTAGGCTGACACGGAGA | + |
Preference number: 6 (lower is better) Translates to: ELSPSSEPCGQR*SQHSCCRLTRR Trigger: TCTCCGTGTCAGCCTACAACAGCTGTGCTGAGACCAACGCTGCCCGCATGGCTCACTACTTGGAGAAAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 ENSMUST00000155790.8 |
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CDS TCA 72 bp | TGCCATAACCATCTGGGACCACAGGTCCGAAGAACATaGCACAGTCTGTCTTGGCAGGGACCAGGTCCTCGA | + |
Preference number: 6 (lower is better) Translates to: CHNHLGPQVRRT*HSLSWQGPGPR Trigger: TCGAGGACCTGGTCCCTGCCAAGACAGACTGTGTCATGTTCTTCGGACCTGTGGTCCCAGATGGTTATGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155790.8 |
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CDS CAA 72 bp | TTGAAGCGACCAGAAACCTTCATCAAGGAGGAGGGCTaGAGGAGGCCCAGGGGTTTTACCACGGTTCTGGCA | + |
Preference number: 6 (lower is better) Translates to: LKRPETFIKEEG*RRPRGFTTVLA Trigger: TGCCAGAACCGTGGTAAAACCCCTGGGCCTCCTCAAGCCCTCCTCCTTGATGAAGGTTTCTGGTCGCTTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028207.13 ENSMUST00000102855.8 |
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CDS CAA 90 bp | GCCACGATGAACTGCAGTGTCTTGTCAAACCAGCGGTTGCCACTGTaGAACTTGCTACCACCACCATGTAGCATCTGGCCTGCTACGTGG | + |
Preference number: 6 (lower is better) Translates to: ATMNCSVLSNQRLPL*NLLPPPCSIWPATW Trigger: CCACGTAGCAGGCCAGATGCTACATGGTGGTGGTAGCAAGTTCAACAGTGGCAACCGCTGGTTTGACAAGACACTGCAGTTCATCGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS TCA 72 bp | CATCTGGCCTGCTACGTGGTTTCGGTAGACATCATCTaGGACTCTAGGCACTTGCTTGTCCAGGCACACGGT | + |
Preference number: 6 (lower is better) Translates to: HLACYVVSVDII*DSRHLLVQAHG Trigger: ACCGTGTGCCTGGACAAGCAAGTGCCTAGAGTCTCAGATGATGTCTACCGAAACCACGTAGCAGGCCAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS GCA 72 bp | GGTCTCTTTGACTTTAAGAAGTTCACCACTGAGTCCTaGTTGGGGCCGGGCACACGGCAAGAAGACAGGATC | + |
Preference number: 6 (lower is better) Translates to: GLFDFKKFTTES*LGPGTRQEDRI Trigger: GATCCTGTCTTCTTGCCGTGTGCCCGGCCCCAAGCAGGACTCAGTGGTGAACTTCTTAAAGTCAAAGAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 ENSMUST00000132981.9 |
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CDS GCA 72 bp | TGCATGCTCATACACCATCCCACAGGAGCCGTCTTCTaGCACGATGAACTGCAGTGTCTTGTCAAACCAGCG | + |
Preference number: 6 (lower is better) Translates to: CMLIHHPTGAVF*HDELQCLVKPA Trigger: CGCTGGTTTGACAAGACACTGCAGTTCATCGTGGCAGAAGACGGCTCCTGTGGGATGGTGTATGAGCATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS CCA 72 bp | CCAGGTGAAACATGCGCAGAGAGGCACTTTCATACGTaGCACACGCCTGCCCATAGATCCTGTAGTATGCCA | + |
Preference number: 6 (lower is better) Translates to: PGETCAERHFHT*HTPAHRSCSMP Trigger: TGGCATACTACAGGATCTATGGGCAGGCGTGTGCCACGTATGAAAGTGCCTCTCTGCGCATGTTTCACCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 ENSMUST00000155790.8 |
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CDS CAA 72 bp | TTGAAGCGACCAGAAACCTTCATCAAGGAGGAGGGCTaGAGGAGGCCCAGGGGTTTTACCTTCTCTCTCTGC | + |
Preference number: 6 (lower is better) Translates to: LKRPETFIKEEG*RRPRGFTFSLC Trigger: GCAGAGAGAGAAGGTAAAACCCCTGGGCCTCCTCAAGCCCTCCTCCTTGATGAAGGTTTCTGGTCGCTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132981.9 ENSMUST00000134120.2 |
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CDS CAA 90 bp | CCGTCTTCTGCCACGATGAACTGCAGTGTCTTGTCAAACCAGCGGTaGCCACTGTTGAACTTGCTACCACCACCATGTAGCATCTGGCCT | + |
Preference number: 6 (lower is better) Translates to: PSSATMNCSVLSNQR*PLLNLLPPPCSIWP Trigger: AGGCCAGATGCTACATGGTGGTGGTAGCAAGTTCAACAGTGGCAACCGCTGGTTTGACAAGACACTGCAGTTCATCGTGGCAGAAGACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS CAA 90 bp | TCTATGTCGTTCTTGATCTCAGGTGTGATGTTGAACCGCAGCTTCTaGGGCATTGGCAAGGGCACCATAGGAGACCGCACAAGCTCAGGC | + |
Preference number: 6 (lower is better) Translates to: SMSFLISGVMLNRSF*GIGKGTIGDRTSSG Trigger: GCCTGAGCTTGTGCGGTCTCCTATGGTGCCCTTGCCAATGCCCAAGAAGCTGCGGTTCAACATCACACCTGAGATCAAGAACGACATAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS TCA 72 bp | ACTGCAGTGTCTTGTCAAACCAGCGGTTGCCACTGTTaGACTTGCTACCACCACCATGTAGCATCTGGCCTG | + |
Preference number: 6 (lower is better) Translates to: TAVSCQTSGCHC*TCYHHHVASGL Trigger: CAGGCCAGATGCTACATGGTGGTGGTAGCAAGTTCAACAGTGGCAACCGCTGGTTTGACAAGACACTGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS TCA 72 bp | TCTCAGCACAGCTGTTGTAGGCTGACACGGAGAAGTTaGTATGGGCCTCCATGGGGTTGTAGCAGATGCCAT | + |
Preference number: 6 (lower is better) Translates to: SQHSCCRLTRRS*YGPPWGCSRCH Trigger: ATGGCATCTGCTACAACCCCATGGAGGCCCATATCAACTTCTCCGTGTCAGCCTACAACAGCTGTGCTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 ENSMUST00000154595.2 ENSMUST00000155790.8 |
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CDS GCA 72 bp | CCTTGGCCCAGGTGTTTCGGTGGTTGGAGGTTAGGATaGCAACAGGCTCTTTGTTGGATTGCAGTGAGGAAT | + |
Preference number: 6 (lower is better) Translates to: PWPRCFGGWRLG*QQALCWIAVRN Trigger: ATTCCTCACTGCAATCCAACAAAGAGCCTGTTGGCATCCTAACCTCCAACCACCGAAACACCTGGGCCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS CCA 72 bp | GGTTGTTGTAGGCCTTGGCCCAGGTGTTTCGGTGGTTaGAGGTTAGGATGCCAACAGGCTCTTTGTTGGATT | + |
Preference number: 6 (lower is better) Translates to: GCCRPWPRCFGG*RLGCQQALCWI Trigger: AATCCAACAAAGAGCCTGTTGGCATCCTAACCTCCAACCACCGAAACACCTGGGCCAAGGCCTACAACAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS CAA 72 bp | AGTGTCTTGTCAAACCAGCGGTTGCCACTGTTGAACTaGCTACCACCACCATGTAGCATCTGGCCTGCTACG | + |
Preference number: 6 (lower is better) Translates to: SVLSNQRLPLLN*LPPPCSIWPAT Trigger: CGTAGCAGGCCAGATGCTACATGGTGGTGGTAGCAAGTTCAACAGTGGCAACCGCTGGTTTGACAAGACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS CAA 72 bp | TTCTTGATCTCAGGTGTGATGTTGAACCGCAGCTTCTaGGGCATTGGCAAGGGCACCATAGGAGACCGCACA | + |
Preference number: 6 (lower is better) Translates to: FLISGVMLNRSF*GIGKGTIGDRT Trigger: TGTGCGGTCTCCTATGGTGCCCTTGCCAATGCCCAAGAAGCTGCGGTTCAACATCACACCTGAGATCAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS CAA 90 bp | ATGAACTGCAGTGTCTTGTCAAACCAGCGGTTGCCACTGTTGAACTaGCTACCACCACCATGTAGCATCTGGCCTGCTACGTGGTTTCGG | + |
Preference number: 6 (lower is better) Translates to: MNCSVLSNQRLPLLN*LPPPCSIWPATWFR Trigger: CCGAAACCACGTAGCAGGCCAGATGCTACATGGTGGTGGTAGCAAGTTCAACAGTGGCAACCGCTGGTTTGACAAGACACTGCAGTTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS CAA 90 bp | AGAACTGGTAGTTATGCACCACGGTTATATGCGTGGGTGGTCTCTTaGACTTTAAGAAGTTCACCACTGAGTCCTGCTTGGGGCCGGGCA | + |
Preference number: 6 (lower is better) Translates to: RTGSYAPRLYAWVVS*TLRSSPLSPAWGRA Trigger: TGCCCGGCCCCAAGCAGGACTCAGTGGTGAACTTCTTAAAGTCAAAGAGACCACCCACGCATATAACCGTGGTGCATAACTACCAGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS CCA 72 bp | TCTTTGACTTTAAGAAGTTCACCACTGAGTCCTGCTTaGGGCCGGGCACACGGCAAGAAGACAGGATCTGAT | + |
Preference number: 6 (lower is better) Translates to: SLTLRSSPLSPA*GRAHGKKTGSD Trigger: ATCAGATCCTGTCTTCTTGCCGTGTGCCCGGCCCCAAGCAGGACTCAGTGGTGAACTTCTTAAAGTCAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 ENSMUST00000132981.9 |
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CDS CAA 72 bp | AACTGCAGTGTCTTGTCAAACCAGCGGTTGCCACTGTaGAACTTGCTACCACCACCATGTAGCATCTGGCCT | + |
Preference number: 6 (lower is better) Translates to: NCSVLSNQRLPL*NLLPPPCSIWP Trigger: AGGCCAGATGCTACATGGTGGTGGTAGCAAGTTCAACAGTGGCAACCGCTGGTTTGACAAGACACTGCAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS CAA 72 bp | GCTTTCTCTATGTCGTTCTTGATCTCAGGTGTGATGTaGAACCGCAGCTTCTTGGGCATTGGCAAGGGCACC | + |
Preference number: 6 (lower is better) Translates to: AFSMSFLISGVM*NRSFLGIGKGT Trigger: GGTGCCCTTGCCAATGCCCAAGAAGCTGCGGTTCAACATCACACCTGAGATCAAGAACGACATAGAGAAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS CAA 90 bp | GCCCAGGTGTTTCGGTGGTTGGAGGTTAGGATGCCAACAGGCTCTTaGTTGGATTGCAGTGAGGAATTCCATATTTTCTCTAGCTGCACA | + |
Preference number: 6 (lower is better) Translates to: AQVFRWLEVRMPTGS*LDCSEEFHIFSSCT Trigger: TGTGCAGCTAGAGAAAATATGGAATTCCTCACTGCAATCCAACAAAGAGCCTGTTGGCATCCTAACCTCCAACCACCGAAACACCTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS CAA 90 bp | TTCTGTTTGGCTTTCTCTATGTCGTTCTTGATCTCAGGTGTGATGTaGAACCGCAGCTTCTTGGGCATTGGCAAGGGCACCATAGGAGAC | + |
Preference number: 6 (lower is better) Translates to: FCLAFSMSFLISGVM*NRSFLGIGKGTIGD Trigger: GTCTCCTATGGTGCCCTTGCCAATGCCCAAGAAGCTGCGGTTCAACATCACACCTGAGATCAAGAACGACATAGAGAAAGCCAAACAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS CAA 90 bp | TGGATCATGATGCTGAGGTTCTGTTTGGCTTTCTCTATGTCGTTCTaGATCTCAGGTGTGATGTTGAACCGCAGCTTCTTGGGCATTGGC | + |
Preference number: 6 (lower is better) Translates to: WIMMLRFCLAFSMSF*ISGVMLNRSFLGIG Trigger: GCCAATGCCCAAGAAGCTGCGGTTCAACATCACACCTGAGATCAAGAACGACATAGAGAAAGCCAAACAGAACCTCAGCATCATGATCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS CAA 90 bp | CAGGTGTTTCGGTGGTTGGAGGTTAGGATGCCAACAGGCTCTTTGTaGGATTGCAGTGAGGAATTCCATATTTTCTCTAGCTGCACAAAG | + |
Preference number: 6 (lower is better) Translates to: QVFRWLEVRMPTGSL*DCSEEFHIFSSCTK Trigger: CTTTGTGCAGCTAGAGAAAATATGGAATTCCTCACTGCAATCCAACAAAGAGCCTGTTGGCATCCTAACCTCCAACCACCGAAACACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS TCA 72 bp | ATATTTTCTCTAGCTGCACAAAGATCTGATCTGAGGTaGGCGGTGTTCCGTCACTGTGGTACACATCCAGCT | + |
Preference number: 6 (lower is better) Translates to: IFSLAAQRSDLR*AVFRHCGTHPA Trigger: AGCTGGATGTGTACCACAGTGACGGAACACCGCTCACCTCAGATCAGATCTTTGTGCAGCTAGAGAAAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS TCA 72 bp | GAGGAATTCCATATTTTCTCTAGCTGCACAAAGATCTaGTCTGAGGTGAGCGGTGTTCCGTCACTGTGGTAC | + |
Preference number: 6 (lower is better) Translates to: EEFHIFSSCTKI*SEVSGVPSLWY Trigger: GTACCACAGTGACGGAACACCGCTCACCTCAGATCAGATCTTTGTGCAGCTAGAGAAAATATGGAATTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS CAA 72 bp | AGTTATGCACCACGGTTATATGCGTGGGTGGTCTCTTaGACTTTAAGAAGTTCACCACTGAGTCCTGCTTGG | + |
Preference number: 6 (lower is better) Translates to: SYAPRLYAWVVS*TLRSSPLSPAW Trigger: CCAAGCAGGACTCAGTGGTGAACTTCTTAAAGTCAAAGAGACCACCCACGCATATAACCGTGGTGCATAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS CAA 72 bp | CGGTGGTTGGAGGTTAGGATGCCAACAGGCTCTTTGTaGGATTGCAGTGAGGAATTCCATATTTTCTCTAGC | + |
Preference number: 6 (lower is better) Translates to: RWLEVRMPTGSL*DCSEEFHIFSS Trigger: GCTAGAGAAAATATGGAATTCCTCACTGCAATCCAACAAAGAGCCTGTTGGCATCCTAACCTCCAACCACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS CAA 72 bp | ATGTCCAGGTCCTGGATCATGATGCTGAGGTTCTGTTaGGCTTTCTCTATGTCGTTCTTGATCTCAGGTGTG | + |
Preference number: 6 (lower is better) Translates to: MSRSWIMMLRFC*AFSMSFLISGV Trigger: CACACCTGAGATCAAGAACGACATAGAGAAAGCCAAACAGAACCTCAGCATCATGATCCAGGACCTGGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS CAA 90 bp | AGCATCATGATGTCCAGGTCCTGGATCATGATGCTGAGGTTCTGTTaGGCTTTCTCTATGTCGTTCTTGATCTCAGGTGTGATGTTGAAC | + |
Preference number: 6 (lower is better) Translates to: SIMMSRSWIMMLRFC*AFSMSFLISGVMLN Trigger: GTTCAACATCACACCTGAGATCAAGAACGACATAGAGAAAGCCAAACAGAACCTCAGCATCATGATCCAGGACCTGGACATCATGATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS CCA 72 bp | CGAAGAACTGGTAGTTATGCACCACGGTTATATGCGTaGGTGGTCTCTTTGACTTTAAGAAGTTCACCACTG | + |
Preference number: 6 (lower is better) Translates to: RRTGSYAPRLYA*VVSLTLRSSPL Trigger: CAGTGGTGAACTTCTTAAAGTCAAAGAGACCACCCACGCATATAACCGTGGTGCATAACTACCAGTTCTTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS CCA 72 bp | GGTGGTTGGAGGTTAGGATGCCAACAGGCTCTTTGTTaGATTGCAGTGAGGAATTCCATATTTTCTCTAGCT | + |
Preference number: 6 (lower is better) Translates to: GGWRLGCQQALC*IAVRNSIFSLA Trigger: AGCTAGAGAAAATATGGAATTCCTCACTGCAATCCAACAAAGAGCCTGTTGGCATCCTAACCTCCAACCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS GCA 72 bp | TTGGAGGTTAGGATGCCAACAGGCTCTTTGTTGGATTaGAGTGAGGAATTCCATATTTTCTCTAGCTGCACA | + |
Preference number: 6 (lower is better) Translates to: LEVRMPTGSLLD*SEEFHIFSSCT Trigger: TGTGCAGCTAGAGAAAATATGGAATTCCTCACTGCAATCCAACAAAGAGCCTGTTGGCATCCTAACCTCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS CAA 72 bp | TTTCGGTGGTTGGAGGTTAGGATGCCAACAGGCTCTTaGTTGGATTGCAGTGAGGAATTCCATATTTTCTCT | + |
Preference number: 6 (lower is better) Translates to: FRWLEVRMPTGS*LDCSEEFHIFS Trigger: AGAGAAAATATGGAATTCCTCACTGCAATCCAACAAAGAGCCTGTTGGCATCCTAACCTCCAACCACCGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |
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CDS TCA 72 bp | GCACACGGTGAAGATGCTCTTCTGTATGGAGTTCACTaGCTCTCGGTTAACTTTGTCTTTAATGAGGTTGTT | + |
Preference number: 6 (lower is better) Translates to: AHGEDALLYGVH*LSVNFVFNEVV Trigger: AACAACCTCATTAAAGACAAAGTTAACCGAGAGTCAGTGAACTCCATACAGAAGAGCATCTTCACCGTGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028207.13 ENSMUST00000102854.10 ENSMUST00000102855.8 |