Pregenerated sensors for CRADD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045867Ensembl transcript IDs: ENSMUST00000053594.7, ENSMUST00000217809.2, ENSMUST00000220279.2
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTTCCGTTCTCTCCCTGGCCTCTGCAGGGAGCTTCGGTGTCTCATaGTTAATCTATACATCCTGCCTGAGTTATTTATCTCCGTCGTCA | + |
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Preference number: 1 (lower is better) Translates to: SSVLSLASAGSFGVS*LIYTSCLSYLSPSS Trigger: TGACGACGGAGATAAATAACTCAGGCAGGATGTATAGATTAAGCATGAGACACCGAAGCTCCCTGCAGAGGCCAGGGAGAGAACGGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053594.7 ENSMUST00000220279.2 |
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| 3UTR CCA 90 bp | CAGCGCAGTCTTCAAGCAATTAAAGCCAATCGATGGTTGAGTGAGTaGTGGACGATCTCTTTCCGTAAACAGATCACTGAAAAGCCCAGA | + |
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Preference number: 1 (lower is better) Translates to: QRSLQAIKANRWLSE*WTISFRKQITEKPR Trigger: TCTGGGCTTTTCAGTGATCTGTTTACGGAAAGAGATCGTCCACCACTCACTCAACCATCGATTGGCTTTAATTGCTTGAAGACTGCGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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| 3UTR GCA 90 bp | GCTATCAATCTTGCTCCACTCCCATATTTTTACACCCTCCGTCTATaGAACAGAAGAGTGGTGTGTGTGTGTGTATGTGTGTGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: AINLAPLPYFYTLRL*NRRVVCVCVCVCVC Trigger: ACACACACACACACATACACACACACACACCACTCTTCTGTTGCATAGACGGAGGGTGTAAAAATATGGGAGTGGAGCAAGATTGATAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053594.7 ENSMUST00000220279.2 |
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| 3UTR TCA 90 bp | TTCAGCCATTCAGGCCTCAAGAGAAACACTGAGCCCTCTTGTCTCTaGTCCAATGCCTTTAACAAATGGACAGAGACTCCTCATACAATT | + |
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Preference number: 1 (lower is better) Translates to: FSHSGLKRNTEPSCL*SNAFNKWTETPHTI Trigger: AATTGTATGAGGAGTCTCTGTCCATTTGTTAAAGGCATTGGATCAGAGACAAGAGGGCTCAGTGTTTCTCTTGAGGCCTGAATGGCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053594.7 ENSMUST00000220279.2 |
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| 3UTR TCA 90 bp | AGTTACAACAGCGCAGTCTTCAAGCAATTAAAGCCAATCGATGGTTaGGTGAGTGGTGGACGATCTCTTTCCGTAAACAGATCACTGAAA | + |
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Preference number: 1 (lower is better) Translates to: SYNSAVFKQLKPIDG*VSGGRSLSVNRSLK Trigger: TTTCAGTGATCTGTTTACGGAAAGAGATCGTCCACCACTCACTCAACCATCGATTGGCTTTAATTGCTTGAAGACTGCGCTGTTGTAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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| 3UTR TCA 90 bp | TGGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGTATAATACTCTCTCATTGAAAGAGGCACATTCTATATCACAA | + |
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Preference number: 1 (lower is better) Translates to: WCVCVYVCVCVCVCV*YNTLSLKEAHSISQ Trigger: TTGTGATATAGAATGTGCCTCTTTCAATGAGAGAGTATTATATCACACACACACACACACACACACACACACATACACACACACACACCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053594.7 ENSMUST00000220279.2 |
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| 3UTR TCA 90 bp | GAAGTTACACATTTTAAAATGTTGAAAGAAGCAGTCATGTACAGGTaGTCCTCCTGCTTCAGTCTCTTAGATGGGATGACAAACACGTAC | + |
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Preference number: 1 (lower is better) Translates to: EVTHFKMLKEAVMYR*SSCFSLLDGMTNTY Trigger: GTACGTGTTTGTCATCCCATCTAAGAGACTGAAGCAGGAGGATCACCTGTACATGACTGCTTCTTTCAACATTTTAAAATGTGTAACTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053594.7 ENSMUST00000220279.2 |
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| 3UTR-3UTR CCA 90 bp | AAGATGAAGGTCTTCCGTTCTCTCCCTGGCCTCTGCAGGGAGCTTCGGTGTCTCTCAGCCAGTGTGACTTaGGAACCCACGCCCCACCAC | + |
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Preference number: 2 (lower is better) Translates to: KMKVFRSLPGLCRELRCLSASVT*EPTPHH Trigger: GTGGTGGGGCGTGGGTTCCCAAGTCACACTGGCTGA...GAGACACCGAAGCTCCCTGCAGAGGCCAGGGAGAGAACGGAAGACCTTCATCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053594.7 ENSMUST00000220279.2 |
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| 3UTR-3UTR CCA 90 bp | CCGCCTTCAGCCATTCAGGCCTCAAGAGAAACACTGAGCCCTCTTGTCTCTGATCTTCCGTTCTCTCCCTaGCCTCTGCAGGGAGCTTCG | + |
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Preference number: 2 (lower is better) Translates to: PPSAIQASRETLSPLVSDLPFSP*PLQGAS Trigger: CGAAGCTCCCTGCAGAGGCCAGGGAGAGAACGGAAG...ATCAGAGACAAGAGGGCTCAGTGTTTCTCTTGAGGCCTGAATGGCTGAAGGCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053594.7 ENSMUST00000220279.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTCTTTCCGTAAACAGATCACTGAAAAGCCCAGAACAAAGCCACCTGCTGAGTCAGCCAGTGTGACTTaGGAACCCACGCCCCACCAC | + |
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Preference number: 2 (lower is better) Translates to: ISFRKQITEKPRTKPPAESASVT*EPTPHH Trigger: GTGGTGGGGCGTGGGTTCCCAAGTCACACTGGCTGA...CTCAGCAGGTGGCTTTGTTCTGGGCTTTTCAGTGATCTGTTTACGGAAAGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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| 3UTR-3UTR CCA 90 bp | AAGATGAAGGTCTTCCGTTCTCTCCCTGGCCTCTGCAGGGAGCTTCGGTGTCTCATTAAAGCCAATCGATaGTTGAGTGAGTGGTGGACG | + |
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Preference number: 2 (lower is better) Translates to: KMKVFRSLPGLCRELRCLIKANR*LSEWWT Trigger: CGTCCACCACTCACTCAACCATCGATTGGCTTTAAT...GAGACACCGAAGCTCCCTGCAGAGGCCAGGGAGAGAACGGAAGACCTTCATCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053594.7 ENSMUST00000220279.2 |
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| 3UTR-3UTR CCA 90 bp | ACACGTACACCTGTCTGGCTAACACTATGTGCAGTTAATGAAAGGCTGGACAACCTTCCGTTCTCTCCCTaGCCTCTGCAGGGAGCTTCG | + |
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Preference number: 2 (lower is better) Translates to: TRTPVWLTLCAVNERLDNLPFSP*PLQGAS Trigger: CGAAGCTCCCTGCAGAGGCCAGGGAGAGAACGGAAG...GTTGTCCAGCCTTTCATTAACTGCACATAGTGTTAGCCAGACAGGTGTACGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053594.7 ENSMUST00000220279.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCCAAACCATAGTTACAACAGCGCAGTCTTCAAGCAATTAAAGCCAATCGATTCAGCCAGTGTGACTTaGGAACCCACGCCCCACCAC | + |
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Preference number: 2 (lower is better) Translates to: VPNHSYNSAVFKQLKPIDSASVT*EPTPHH Trigger: GTGGTGGGGCGTGGGTTCCCAAGTCACACTGGCTGA...ATCGATTGGCTTTAATTGCTTGAAGACTGCGCTGTTGTAACTATGGTTTGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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| 3UTR-3UTR GCA 90 bp | CCGCCTTCAGCCATTCAGGCCTCAAGAGAAACACTGAGCCCTCTTGTCTCTGATGACTGCTATCAATCTTaGTCCACTCCCATATTTTTA | + |
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Preference number: 2 (lower is better) Translates to: PPSAIQASRETLSPLVSDDCYQS*STPIFL Trigger: TAAAAATATGGGAGTGGAGCAAGATTGATAGCAGTC...ATCAGAGACAAGAGGGCTCAGTGTTTCTCTTGAGGCCTGAATGGCTGAAGGCGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053594.7 ENSMUST00000220279.2 |
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| 3UTR-3UTR CCA 90 bp | ACACGTACACCTGTCTGGCTAACACTATGTGCAGTTAATGAAAGGCTGGACAACATTAAAGCCAATCGATaGTTGAGTGAGTGGTGGACG | + |
|
Preference number: 2 (lower is better) Translates to: TRTPVWLTLCAVNERLDNIKANR*LSEWWT Trigger: CGTCCACCACTCACTCAACCATCGATTGGCTTTAAT...GTTGTCCAGCCTTTCATTAACTGCACATAGTGTTAGCCAGACAGGTGTACGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053594.7 ENSMUST00000220279.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTCAAGAGAAACACTGAGCCCTCTTGTCTCTGATCCAATGCCTTTAACAAATTCTATACATCCTGCCTaGGTTATTTATCTCCGTCGT | + |
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Preference number: 2 (lower is better) Translates to: ASRETLSPLVSDPMPLTNSIHPA*VIYLRR Trigger: ACGACGGAGATAAATAACTCAGGCAGGATGTATAGA...ATTTGTTAAAGGCATTGGATCAGAGACAAGAGGGCTCAGTGTTTCTCTTGAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053594.7 ENSMUST00000220279.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCCTCTTGTCTCTGATCCAATGCCTTTAACAAATGGACAGAGACTCCTCATATTAATCTATACATCCTaGCTGAGTTATTTATCTCCG | + |
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Preference number: 2 (lower is better) Translates to: SPLVSDPMPLTNGQRLLILIYTS*LSYLSP Trigger: CGGAGATAAATAACTCAGGCAGGATGTATAGATTAA...TATGAGGAGTCTCTGTCCATTTGTTAAAGGCATTGGATCAGAGACAAGAGGGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053594.7 ENSMUST00000220279.2 |
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| 3UTR TCA 72 bp | ACACTATGTGCAGTTAATGAAAGGCTGGACAACCCATaGCGCCCCTCGGGAACTCACCGCCTTCAGCCATTC | + |
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Preference number: 3 (lower is better) Translates to: TLCAVNERLDNP*RPSGTHRLQPF Trigger: GAATGGCTGAAGGCGGTGAGTTCCCGAGGGGCGTCATGGGTTGTCCAGCCTTTCATTAACTGCACATAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053594.7 ENSMUST00000220279.2 |
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| 3UTR-3UTR CAA 90 bp | ACACGTACACCTGTCTGGCTAACACTATGTGCAGTTAATGAAAGGCTGGACAACTTCAGCCAGTGTGACTaGGGAACCCACGCCCCACCA | + |
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Preference number: 3 (lower is better) Translates to: TRTPVWLTLCAVNERLDNFSQCD*GTHAPP Trigger: TGGTGGGGCGTGGGTTCCCAAGTCACACTGGCTGAA...GTTGTCCAGCCTTTCATTAACTGCACATAGTGTTAGCCAGACAGGTGTACGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053594.7 ENSMUST00000220279.2 |
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| 3UTR-3UTR CAA 90 bp | AGCCCTCTTGTCTCTGATCCAATGCCTTTAACAAATGGACAGAGACTCCTCATATTCAGCCAGTGTGACTaGGGAACCCACGCCCCACCA | + |
|
Preference number: 3 (lower is better) Translates to: SPLVSDPMPLTNGQRLLIFSQCD*GTHAPP Trigger: TGGTGGGGCGTGGGTTCCCAAGTCACACTGGCTGAA...TATGAGGAGTCTCTGTCCATTTGTTAAAGGCATTGGATCAGAGACAAGAGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053594.7 ENSMUST00000220279.2 |
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| 3UTR TCA 72 bp | CAAATGGACAGAGACTCCTCATACAATTTGTTAAGATaGAGGTCTTCCGTTCTCTCCCTGGCCTCTGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: QMDRDSSYNLLR*RSSVLSLASAG Trigger: CCCTGCAGAGGCCAGGGAGAGAACGGAAGACCTTCATCTTAACAAATTGTATGAGGAGTCTCTGTCCATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053594.7 ENSMUST00000220279.2 |
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| 3UTR GCA 72 bp | CTCTCCCTGGCCTCTGCAGGGAGCTTCGGTGTCTCATaGTTAATCTATACATCCTGCCTGAGTTATTTATCT | + |
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Preference number: 3 (lower is better) Translates to: LSLASAGSFGVS*LIYTSCLSYLS Trigger: AGATAAATAACTCAGGCAGGATGTATAGATTAAGCATGAGACACCGAAGCTCCCTGCAGAGGCCAGGGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053594.7 ENSMUST00000220279.2 |
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| 3UTR TCA 72 bp | TCAGGCCTCAAGAGAAACACTGAGCCCTCTTGTCTCTaGTCCAATGCCTTTAACAAATGGACAGAGACTCCT | + |
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Preference number: 3 (lower is better) Translates to: SGLKRNTEPSCL*SNAFNKWTETP Trigger: AGGAGTCTCTGTCCATTTGTTAAAGGCATTGGATCAGAGACAAGAGGGCTCAGTGTTTCTCTTGAGGCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053594.7 ENSMUST00000220279.2 |
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| 3UTR GCA 72 bp | CTTGCTCCACTCCCATATTTTTACACCCTCCGTCTATaGAACAGAAGAGTGGTGTGTGTGTGTGTATGTGTG | + |
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Preference number: 3 (lower is better) Translates to: LAPLPYFYTLRL*NRRVVCVCVCV Trigger: CACACATACACACACACACACCACTCTTCTGTTGCATAGACGGAGGGTGTAAAAATATGGGAGTGGAGCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053594.7 ENSMUST00000220279.2 |
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| 3UTR GCA 72 bp | TATTTATCTCCGTCGTCACATGACTGCTATCAATCTTaGTCCACTCCCATATTTTTACACCCTCCGTCTATG | + |
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Preference number: 3 (lower is better) Translates to: YLSPSSHDCYQS*STPIFLHPPSM Trigger: CATAGACGGAGGGTGTAAAAATATGGGAGTGGAGCAAGATTGATAGCAGTCATGTGACGACGGAGATAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053594.7 ENSMUST00000220279.2 |
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| 3UTR TCA 72 bp | CATTTTAAAATGTTGAAAGAAGCAGTCATGTACAGGTaGTCCTCCTGCTTCAGTCTCTTAGATGGGATGACA | + |
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Preference number: 3 (lower is better) Translates to: HFKMLKEAVMYR*SSCFSLLDGMT Trigger: TGTCATCCCATCTAAGAGACTGAAGCAGGAGGATCACCTGTACATGACTGCTTCTTTCAACATTTTAAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053594.7 ENSMUST00000220279.2 |
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| 3UTR TCA 72 bp | GTGTGTGTGTGTGTGTGTGATATAATACTCTCTCATTaGAAGAGGCACATTCTATATCACAATTTGCTTTTT | + |
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Preference number: 3 (lower is better) Translates to: VCVCVCDIILSH*KRHILYHNLLF Trigger: AAAAAGCAAATTGTGATATAGAATGTGCCTCTTTCAATGAGAGAGTATTATATCACACACACACACACACAC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053594.7 ENSMUST00000220279.2 |
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| CDS-3UTR TCA 90 bp | CAAAGCCACCTGCTGAGAAAAGTCCGGTTCAGCCAGTGTGACTTGGGAACCCACCTGATGGCGAGCTGCTaGGGATGTGTGAGGGGATTC | + |
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Preference number: 4 (lower is better) Translates to: QSHLLRKVRFSQCDLGTHLMASC*GCVRGF Trigger: GAATCCCCTCACACATCCTCAGCAGCTCGCCATCAG...GTGGGTTCCCAAGTCACACTGGCTGAACCGGACTTTTCTCAGCAGGTGGCTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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| CDS-3UTR TCA 90 bp | GAACAAAGCCACCTGCTGAGAAAAGTCCGGTTCAGCCAGTGTGACTTGGGAACCTCCGGGCCTAGCCTCTaGGCCAGCTGGTTAATCTGC | + |
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Preference number: 4 (lower is better) Translates to: EQSHLLRKVRFSQCDLGTSGPSL*ASWLIC Trigger: GCAGATTAACCAGCTGGCTCAGAGGCTAGGCCCGGA...GGTTCCCAAGTCACACTGGCTGAACCGGACTTTTCTCAGCAGGTGGCTTTGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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| CDS-3UTR TCA 90 bp | TCACCGCCTTCAGCCATTCAGGCCTCAAGAGAAACACTGAGCCCTCTTGTCTCTCTGATGGCGAGCTGCTaGGGATGTGTGAGGGGATTC | + |
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Preference number: 4 (lower is better) Translates to: SPPSAIQASRETLSPLVSLMASC*GCVRGF Trigger: GAATCCCCTCACACATCCTCAGCAGCTCGCCATCAG...AGAGACAAGAGGGCTCAGTGTTTCTCTTGAGGCCTGAATGGCTGAAGGCGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053594.7 ENSMUST00000220279.2 |
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| CDS-3UTR GCA 90 bp | GAACAAAGCCACCTGCTGAGAAAAGTCCGGTTCAGCCAGTGTGACTTGGGAACCCTTAGGAAGGTGGCCTaGTTCCCAAAACGCTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: EQSHLLRKVRFSQCDLGTLRKVA*FPKRWR Trigger: GCGCCAGCGTTTTGGGAAGCAGGCCACCTTCCTAAG...GGTTCCCAAGTCACACTGGCTGAACCGGACTTTTCTCAGCAGGTGGCTTTGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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| CDS-3UTR TCA 90 bp | AGATCACTGAAAAGCCCAGAACAAAGCCACCTGCTGAGAAAAGTCCGGTTCAGCTCCGGGCCTAGCCTCTaGGCCAGCTGGTTAATCTGC | + |
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Preference number: 4 (lower is better) Translates to: RSLKSPEQSHLLRKVRFSSGPSL*ASWLIC Trigger: GCAGATTAACCAGCTGGCTCAGAGGCTAGGCCCGGA...GCTGAACCGGACTTTTCTCAGCAGGTGGCTTTGTTCTGGGCTTTTCAGTGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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| CDS-3UTR GCA 90 bp | GAACAAAGCCACCTGCTGAGAAAAGTCCGGTTCAGCCAGTGTGACTTGGGAACCTCCACCACCTGCGAATaGACGTTGTGGGGATGGTTG | + |
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Preference number: 4 (lower is better) Translates to: EQSHLLRKVRFSQCDLGTSTTCE*TLWGWL Trigger: CAACCATCCCCACAACGTGCATTCGCAGGTGGTGGA...GGTTCCCAAGTCACACTGGCTGAACCGGACTTTTCTCAGCAGGTGGCTTTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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| CDS-3UTR CCA 90 bp | GAACAAAGCCACCTGCTGAGAAAAGTCCGGTTCAGCCAGTGTGACTTGGGAACCTCAGCCTCCACTGCCTaGAGGCCCTTGTGTAAGCTT | + |
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Preference number: 4 (lower is better) Translates to: EQSHLLRKVRFSQCDLGTSASTA*RPLCKL Trigger: AAGCTTACACAAGGGCCTCCAGGCAGTGGAGGCTGA...GGTTCCCAAGTCACACTGGCTGAACCGGACTTTTCTCAGCAGGTGGCTTTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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| CDS-3UTR CCA 90 bp | AGATCACTGAAAAGCCCAGAACAAAGCCACCTGCTGAGAAAAGTCCGGTTCAGCCACTCCAGCATGTGCTaGAGCAGGGAGGGATCAGCC | + |
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Preference number: 4 (lower is better) Translates to: RSLKSPEQSHLLRKVRFSHSSMC*SREGSA Trigger: GGCTGATCCCTCCCTGCTCCAGCACATGCTGGAGTG...GCTGAACCGGACTTTTCTCAGCAGGTGGCTTTGTTCTGGGCTTTTCAGTGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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| CDS-3UTR GCA 90 bp | AGATCACTGAAAAGCCCAGAACAAAGCCACCTGCTGAGAAAAGTCCGGTTCAGCCTTAGGAAGGTGGCCTaGTTCCCAAAACGCTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: RSLKSPEQSHLLRKVRFSLRKVA*FPKRWR Trigger: GCGCCAGCGTTTTGGGAAGCAGGCCACCTTCCTAAG...GCTGAACCGGACTTTTCTCAGCAGGTGGCTTTGTTCTGGGCTTTTCAGTGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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| CDS-3UTR CCA 90 bp | GAACAAAGCCACCTGCTGAGAAAAGTCCGGTTCAGCCAGTGTGACTTGGGAACCAGCTGGTTAATCTGCTaGTCTGATGGCGAGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: EQSHLLRKVRFSQCDLGTSWLIC*SDGELL Trigger: CAGCAGCTCGCCATCAGACCAGCAGATTAACCAGCT...GGTTCCCAAGTCACACTGGCTGAACCGGACTTTTCTCAGCAGGTGGCTTTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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| CDS-3UTR GCA 90 bp | AGATCACTGAAAAGCCCAGAACAAAGCCACCTGCTGAGAAAAGTCCGGTTCAGCGCCAGCTGGTTAATCTaGTGGTCTGATGGCGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: RSLKSPEQSHLLRKVRFSASWLI*WSDGEL Trigger: CAGCTCGCCATCAGACCAGCAGATTAACCAGCTGGC...GCTGAACCGGACTTTTCTCAGCAGGTGGCTTTGTTCTGGGCTTTTCAGTGATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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| CDS-3UTR CCA 90 bp | GAACAAAGCCACCTGCTGAGAAAAGTCCGGTTCAGCCAGTGTGACTTGGGAACCGTAAGCTTAGGAAGGTaGCCTGCTTCCCAAAACGCT | + |
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Preference number: 4 (lower is better) Translates to: EQSHLLRKVRFSQCDLGTVSLGR*PASQNA Trigger: AGCGTTTTGGGAAGCAGGCCACCTTCCTAAGCTTAC...GGTTCCCAAGTCACACTGGCTGAACCGGACTTTTCTCAGCAGGTGGCTTTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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| CDS-3UTR CCA 90 bp | CCGCCTTCAGCCATTCAGGCCTCAAGAGAAACACTGAGCCCTCTTGTCTCTGATGTAAGCTTAGGAAGGTaGCCTGCTTCCCAAAACGCT | + |
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Preference number: 4 (lower is better) Translates to: PPSAIQASRETLSPLVSDVSLGR*PASQNA Trigger: AGCGTTTTGGGAAGCAGGCCACCTTCCTAAGCTTAC...ATCAGAGACAAGAGGGCTCAGTGTTTCTCTTGAGGCCTGAATGGCTGAAGGCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053594.7 ENSMUST00000220279.2 |
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| CDS-3UTR GCA 90 bp | ACACGTACACCTGTCTGGCTAACACTATGTGCAGTTAATGAAAGGCTGGACAACCTTAGGAAGGTGGCCTaGTTCCCAAAACGCTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: TRTPVWLTLCAVNERLDNLRKVA*FPKRWR Trigger: GCGCCAGCGTTTTGGGAAGCAGGCCACCTTCCTAAG...GTTGTCCAGCCTTTCATTAACTGCACATAGTGTTAGCCAGACAGGTGTACGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053594.7 ENSMUST00000220279.2 |
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| CDS-3UTR TCA 90 bp | AGCCCTCTTGTCTCTGATCCAATGCCTTTAACAAATGGACAGAGACTCCTCATACTGATGGCGAGCTGCTaGGGATGTGTGAGGGGATTC | + |
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Preference number: 4 (lower is better) Translates to: SPLVSDPMPLTNGQRLLILMASC*GCVRGF Trigger: GAATCCCCTCACACATCCTCAGCAGCTCGCCATCAG...TATGAGGAGTCTCTGTCCATTTGTTAAAGGCATTGGATCAGAGACAAGAGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053594.7 ENSMUST00000220279.2 |
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| CDS-3UTR GCA 90 bp | TCCGTAAACAGATCACTGAAAAGCCCAGAACAAAGCCACCTGCTGAGAAAAGTCGCCAGCTGGTTAATCTaGTGGTCTGATGGCGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: SVNRSLKSPEQSHLLRKVASWLI*WSDGEL Trigger: CAGCTCGCCATCAGACCAGCAGATTAACCAGCTGGC...GACTTTTCTCAGCAGGTGGCTTTGTTCTGGGCTTTTCAGTGATCTGTTTACGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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| CDS-3UTR GCA 90 bp | TCCGTAAACAGATCACTGAAAAGCCCAGAACAAAGCCACCTGCTGAGAAAAGTCTCCACCACCTGCGAATaGACGTTGTGGGGATGGTTG | + |
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Preference number: 4 (lower is better) Translates to: SVNRSLKSPEQSHLLRKVSTTCE*TLWGWL Trigger: CAACCATCCCCACAACGTGCATTCGCAGGTGGTGGA...GACTTTTCTCAGCAGGTGGCTTTGTTCTGGGCTTTTCAGTGATCTGTTTACGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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| CDS-3UTR CCA 90 bp | ACACGTACACCTGTCTGGCTAACACTATGTGCAGTTAATGAAAGGCTGGACAACTCAGCCTCCACTGCCTaGAGGCCCTTGTGTAAGCTT | + |
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Preference number: 4 (lower is better) Translates to: TRTPVWLTLCAVNERLDNSASTA*RPLCKL Trigger: AAGCTTACACAAGGGCCTCCAGGCAGTGGAGGCTGA...GTTGTCCAGCCTTTCATTAACTGCACATAGTGTTAGCCAGACAGGTGTACGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053594.7 ENSMUST00000220279.2 |
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| CDS-3UTR CCA 90 bp | ATCTCTTTCCGTAAACAGATCACTGAAAAGCCCAGAACAAAGCCACCTGCTGAGTCAGCCTCCACTGCCTaGAGGCCCTTGTGTAAGCTT | + |
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Preference number: 4 (lower is better) Translates to: ISFRKQITEKPRTKPPAESASTA*RPLCKL Trigger: AAGCTTACACAAGGGCCTCCAGGCAGTGGAGGCTGA...CTCAGCAGGTGGCTTTGTTCTGGGCTTTTCAGTGATCTGTTTACGGAAAGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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| CDS-3UTR CCA 90 bp | ATCTCTTTCCGTAAACAGATCACTGAAAAGCCCAGAACAAAGCCACCTGCTGAGAGCTGGTTAATCTGCTaGTCTGATGGCGAGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: ISFRKQITEKPRTKPPAESWLIC*SDGELL Trigger: CAGCAGCTCGCCATCAGACCAGCAGATTAACCAGCT...CTCAGCAGGTGGCTTTGTTCTGGGCTTTTCAGTGATCTGTTTACGGAAAGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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| CDS-3UTR CCA 90 bp | GTTCCAAACCATAGTTACAACAGCGCAGTCTTCAAGCAATTAAAGCCAATCGATCACTCCAGCATGTGCTaGAGCAGGGAGGGATCAGCC | + |
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Preference number: 4 (lower is better) Translates to: VPNHSYNSAVFKQLKPIDHSSMC*SREGSA Trigger: GGCTGATCCCTCCCTGCTCCAGCACATGCTGGAGTG...ATCGATTGGCTTTAATTGCTTGAAGACTGCGCTGTTGTAACTATGGTTTGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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| CDS-3UTR GCA 90 bp | GTTCCAAACCATAGTTACAACAGCGCAGTCTTCAAGCAATTAAAGCCAATCGATGCCAGCTGGTTAATCTaGTGGTCTGATGGCGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: VPNHSYNSAVFKQLKPIDASWLI*WSDGEL Trigger: CAGCTCGCCATCAGACCAGCAGATTAACCAGCTGGC...ATCGATTGGCTTTAATTGCTTGAAGACTGCGCTGTTGTAACTATGGTTTGGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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| 3UTR CAA 72 bp | CAGCGCAGTCTTCAAGCAATTAAAGCCAATCGATGGTaGAGTGAGTGGTGGACGATCTCTTTCCGTAAACAG | + |
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Preference number: 4 (lower is better) Translates to: QRSLQAIKANRW*SEWWTISFRKQ Trigger: CTGTTTACGGAAAGAGATCGTCCACCACTCACTCAACCATCGATTGGCTTTAATTGCTTGAAGACTGCGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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| CDS-3UTR CCA 90 bp | GTTCCAAACCATAGTTACAACAGCGCAGTCTTCAAGCAATTAAAGCCAATCGATGTAAGCTTAGGAAGGTaGCCTGCTTCCCAAAACGCT | + |
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Preference number: 4 (lower is better) Translates to: VPNHSYNSAVFKQLKPIDVSLGR*PASQNA Trigger: AGCGTTTTGGGAAGCAGGCCACCTTCCTAAGCTTAC...ATCGATTGGCTTTAATTGCTTGAAGACTGCGCTGTTGTAACTATGGTTTGGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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| CDS TCA 90 bp | AGTCCCAGAGACAGGACCACGGGCTCCCACTCCGGGCCTAGCCTCTaGGCCAGCTGGTTAATCTGCTGGTCTGATGGCGAGCTGCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: SPRDRTTGSHSGPSL*ASWLICWSDGELLR Trigger: CCTCAGCAGCTCGCCATCAGACCAGCAGATTAACCAGCTGGCTCAGAGGCTAGGCCCGGAGTGGGAGCCCGTGGTCCTGTCTCTGGGACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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| CDS-3UTR CAA 90 bp | AAGATGAAGGTCTTCCGTTCTCTCCCTGGCCTCTGCAGGGAGCTTCGGTGTCTCTGTCCAGCAACAGCATaGTCTTCCGGAGGCCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: KMKVFRSLPGLCRELRCLCPATA*SSGGLW Trigger: CCACAGGCCTCCGGAAGACAATGCTGTTGCTGGACA...GAGACACCGAAGCTCCCTGCAGAGGCCAGGGAGAGAACGGAAGACCTTCATCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053594.7 ENSMUST00000220279.2 |
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| CDS-3UTR CAA 90 bp | GAACAAAGCCACCTGCTGAGAAAAGTCCGGTTCAGCCAGTGTGACTTGGGAACCTGTCCAGCAACAGCATaGTCTTCCGGAGGCCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: EQSHLLRKVRFSQCDLGTCPATA*SSGGLW Trigger: CCACAGGCCTCCGGAAGACAATGCTGTTGCTGGACA...GGTTCCCAAGTCACACTGGCTGAACCGGACTTTTCTCAGCAGGTGGCTTTGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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| CDS-3UTR CAA 90 bp | AGATCACTGAAAAGCCCAGAACAAAGCCACCTGCTGAGAAAAGTCCGGTTCAGCTGTCCAGCAACAGCATaGTCTTCCGGAGGCCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: RSLKSPEQSHLLRKVRFSCPATA*SSGGLW Trigger: CCACAGGCCTCCGGAAGACAATGCTGTTGCTGGACA...GCTGAACCGGACTTTTCTCAGCAGGTGGCTTTGTTCTGGGCTTTTCAGTGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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| CDS-3UTR CAA 90 bp | TCACCGCCTTCAGCCATTCAGGCCTCAAGAGAAACACTGAGCCCTCTTGTCTCTCCGGAGGCCTGTGGTTaGAGCTTTGATTTCTTGAAT | + |
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Preference number: 5 (lower is better) Translates to: SPPSAIQASRETLSPLVSPEACG*SFDFLN Trigger: ATTCAAGAAATCAAAGCTCAAACCACAGGCCTCCGG...AGAGACAAGAGGGCTCAGTGTTTCTCTTGAGGCCTGAATGGCTGAAGGCGGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053594.7 ENSMUST00000220279.2 |
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| CDS-3UTR CAA 90 bp | AGATCACTGAAAAGCCCAGAACAAAGCCACCTGCTGAGAAAAGTCCGGTTCAGCCCGGAGGCCTGTGGTTaGAGCTTTGATTTCTTGAAT | + |
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Preference number: 5 (lower is better) Translates to: RSLKSPEQSHLLRKVRFSPEACG*SFDFLN Trigger: ATTCAAGAAATCAAAGCTCAAACCACAGGCCTCCGG...GCTGAACCGGACTTTTCTCAGCAGGTGGCTTTGTTCTGGGCTTTTCAGTGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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| CDS TCA 72 bp | GACAGGACCACGGGCTCCCACTCCGGGCCTAGCCTCTaGGCCAGCTGGTTAATCTGCTGGTCTGATGGCGAG | + |
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Preference number: 6 (lower is better) Translates to: DRTTGSHSGPSL*ASWLICWSDGE Trigger: CTCGCCATCAGACCAGCAGATTAACCAGCTGGCTCAGAGGCTAGGCCCGGAGTGGGAGCCCGTGGTCCTGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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| CDS CAA 90 bp | ATGTGCTGGAGCAGGGAGGGATCAGCCTCCACTGCCTGGAGGCCCTaGTGTAAGCTTAGGAAGGTGGCCTGCTTCCCAAAACGCTGGCGC | + |
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Preference number: 6 (lower is better) Translates to: MCWSREGSASTAWRP*CKLRKVACFPKRWR Trigger: GCGCCAGCGTTTTGGGAAGCAGGCCACCTTCCTAAGCTTACACAAGGGCCTCCAGGCAGTGGAGGCTGATCCCTCCCTGCTCCAGCACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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| CDS CCA 72 bp | CCACTGCCTGGAGGCCCTTGTGTAAGCTTAGGAAGGTaGCCTGCTTCCCAAAACGCTGGCGCCAGCGGACAA | + |
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Preference number: 6 (lower is better) Translates to: PLPGGPCVSLGR*PASQNAGASGQ Trigger: TTGTCCGCTGGCGCCAGCGTTTTGGGAAGCAGGCCACCTTCCTAAGCTTACACAAGGGCCTCCAGGCAGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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| CDS CAA 72 bp | AGCAGGGAGGGATCAGCCTCCACTGCCTGGAGGCCCTaGTGTAAGCTTAGGAAGGTGGCCTGCTTCCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: SREGSASTAWRP*CKLRKVACFPK Trigger: TTTTGGGAAGCAGGCCACCTTCCTAAGCTTACACAAGGGCCTCCAGGCAGTGGAGGCTGATCCCTCCCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053594.7 ENSMUST00000217809.2 ENSMUST00000220279.2 |
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