Pregenerated sensors for CRACR2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048200Ensembl transcript IDs: ENSMUST00000053670.12, ENSMUST00000116247.3, ENSMUST00000167491.8, ENSMUST00000170879.4, ENSMUST00000172215.8
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACCAAGACCAGTCCCTCCTAGGGGCAGTCCTCTGGATAGGGAAGTaGGTCACTCGGGGCTGGTCATCGGGCACTAGGAAGATGGCCAGA | + |
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Preference number: 1 (lower is better) Translates to: HQDQSLLGAVLWIGK*VTRGWSSGTRKMAR Trigger: TCTGGCCATCTTCCTAGTGCCCGATGACCAGCCCCGAGTGACTCACTTCCCTATCCAGAGGACTGCCCCTAGGAGGGACTGGTCTTGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000116247.3 ENSMUST00000170879.4 |
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| 3UTR-3UTR GCA 90 bp | GGCGTGGTGGCACACGCGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCGCCTTCCTGTGGCTACTaGCCAGCAGCTTGGTCTCAC | + |
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Preference number: 2 (lower is better) Translates to: GVVAHAPLIPALGRQRQAPSCGY*PAAWSH Trigger: GTGAGACCAAGCTGCTGGGCAGTAGCCACAGGAAGG...CGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGCGTGTGCCACCACGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116247.3 |
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| 3UTR-3UTR CCA 90 bp | TTGACTACTCTGAGGTTAGCTCCTTCAGGCATGGGATGCCTTCTGGGTAGAGCCGGCCAGAGCCTCGTCTaGGGGGCCGAGCCCAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: LTTLRLAPSGMGCLLGRAGQSLV*GAEPSH Trigger: GTGGCTGGGCTCGGCCCCCCAGACGAGGCTCTGGCC...GGCTCTACCCAGAAGGCATCCCATGCCTGAAGGAGCTAACCTCAGAGTAGTCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000116247.3 ENSMUST00000170879.4 |
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| 3UTR-3UTR GCA 90 bp | AGCAAGTATCCGCCACCAAGACCAGTCCCTCCTAGGGGCAGTCCTCTGGATAGGCCTTCCTGTGGCTACTaGCCAGCAGCTTGGTCTCAC | + |
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Preference number: 2 (lower is better) Translates to: SKYPPPRPVPPRGSPLDRPSCGY*PAAWSH Trigger: GTGAGACCAAGCTGCTGGGCAGTAGCCACAGGAAGG...CCTATCCAGAGGACTGCCCCTAGGAGGGACTGGTCTTGGTGGCGGATACTTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116247.3 ENSMUST00000170879.4 |
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| 3UTR-3UTR CCA 90 bp | AGTATCCGCCACCAAGACCAGTCCCTCCTAGGGGCAGTCCTCTGGATAGGGAAGGCTAGAGCCTTCCTGTaGCTACTGCCCAGCAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: SIRHQDQSLLGAVLWIGKARAFL*LLPSSL Trigger: CAAGCTGCTGGGCAGTAGCCACAGGAAGGCTCTAGC...CTTCCCTATCCAGAGGACTGCCCCTAGGAGGGACTGGTCTTGGTGGCGGATACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116247.3 ENSMUST00000170879.4 |
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| 3UTR TCA 72 bp | CAGTCCCTCCTAGGGGCAGTCCTCTGGATAGGGAAGTaGGTCACTCGGGGCTGGTCATCGGGCACTAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: QSLLGAVLWIGK*VTRGWSSGTRK Trigger: CTTCCTAGTGCCCGATGACCAGCCCCGAGTGACTCACTTCCCTATCCAGAGGACTGCCCCTAGGAGGGACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000116247.3 ENSMUST00000170879.4 |
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| 3UTR GCA 72 bp | TTGACTACTCTGAGGTTAGCTCCTTCAGGCATGGGATaGCTTCTGGGTAGAGCCACACACTTAGCAAGTATC | + |
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Preference number: 3 (lower is better) Translates to: LTTLRLAPSGMG*LLGRATHLASI Trigger: GATACTTGCTAAGTGTGTGGCTCTACCCAGAAGGCATCCCATGCCTGAAGGAGCTAACCTCAGAGTAGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053670.12 ENSMUST00000116247.3 ENSMUST00000170879.4 |
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| CDS-3UTR CCA 90 bp | CCACCAAGACCAGTCCCTCCTAGGGGCAGTCCTCTGGATAGGGAAGTGAGTCACCAAGGGGGACCCACCTaGGGCCGACTCCACCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: PPRPVPPRGSPLDREVSHQGGPT*GRLHPH Trigger: GTGGGGGTGGAGTCGGCCCCAGGTGGGTCCCCCTTG...GTGACTCACTTCCCTATCCAGAGGACTGCCCCTAGGAGGGACTGGTCTTGGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000053670.12 ENSMUST00000170879.4 |
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| CDS-3UTR CCA 90 bp | GGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGACAGCCTGGTCTACAGAATGGGCCAGAGCCTCGTCTaGGGGGCCGAGCCCAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: GGRGRRISEFEDSLVYRMGQSLV*GAEPSH Trigger: GTGGCTGGGCTCGGCCCCCCAGACGAGGCTCTGGCC...CATTCTGTAGACCAGGCTGTCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS-3UTR TCA 90 bp | GTCCCTCCTAGGGGCAGTCCTCTGGATAGGGAAGTGAGTCACTCGGGGCTGGTCAGAACTCCCGGGCTGTaGGGAAGCCAGTGTGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: VPPRGSPLDREVSHSGLVRTPGL*GSQCGP Trigger: AGGCCCACACTGGCTTCCTCACAGCCCGGGAGTTCT...GACCAGCCCCGAGTGACTCACTTCCCTATCCAGAGGACTGCCCCTAGGAGGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170879.4 |
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| CDS-3UTR GCA 90 bp | GGTCCGGGCTTGTGGGCAATAGCTAGAGCCTTCCTGTGGCTACTGCCCAGCAGCGGTAGGTTCTGGCTCTaGCTGCGGTGTCGCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GPGLWAIARAFLWLLPSSGRFWL*LRCRCS Trigger: GGAGCAGCGACACCGCAGGCAGAGCCAGAACCTACC...GCTGCTGGGCAGTAGCCACAGGAAGGCTCTAGCTATTGCCCACAAGCCCGGACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170879.4 |
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| CDS-3UTR GCA 90 bp | ACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGACAGCCTGGTCTACATGTTCCAGCTCCCGCTaGCTCAGGCCTGCGCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: TREAEAGGFLSSRTAWSTCSSSR*LRPARS Trigger: GGAGCGCGCAGGCCTGAGGCAGCGGGAGCTGGAACA...TGTAGACCAGGCTGTCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS-3UTR GCA 90 bp | CCACCAAGACCAGTCCCTCCTAGGGGCAGTCCTCTGGATAGGGAAGTGAGTCACCCACATCTCTCCCGCTaGCTCAGGCCTGCGCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PPRPVPPRGSPLDREVSHPHLSR*LRPARS Trigger: GGAGCGCGCAGGCCTGAGGCAGCGGGAGAGATGTGG...GTGACTCACTTCCCTATCCAGAGGACTGCCCCTAGGAGGGACTGGTCTTGGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170879.4 |
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| CDS-3UTR CCA 90 bp | GGCGTGGTGGCACACGCGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCGGTGAGGAAGCCAGTGTaGGCCTGGTCCAGACTTTCA | + |
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Preference number: 4 (lower is better) Translates to: GVVAHAPLIPALGRQRQAVRKPV*AWSRLS Trigger: TGAAAGTCTGGACCAGGCCCACACTGGCTTCCTCAC...CGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGCGTGTGCCACCACGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS-3UTR TCA 90 bp | GCCACACACTTAGCAAGTATCCGCCACCAAGACCAGTCCCTCCTAGGGGCAGTCCGCCCTCCAGTCGACTaGGCTGCTCTTGGGCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: ATHLASIRHQDQSLLGAVRPPVD*AALGPG Trigger: ACCAGGCCCAAGAGCAGCTCAGTCGACTGGAGGGCG...GACTGCCCCTAGGAGGGACTGGTCTTGGTGGCGGATACTTGCTAAGTGTGTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS-3UTR GCA 90 bp | ACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGACAGCCTGGTCTACAGTTCTCACAGCCCATTaGTCGCCCAGGACCCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: TREAEAGGFLSSRTAWSTVLTAH*SPRTRA Trigger: GGCCCGGGTCCTGGGCGAGCAATGGGCTGTGAGAAC...TGTAGACCAGGCTGTCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS-3UTR GCA 90 bp | GCCACACACTTAGCAAGTATCCGCCACCAAGACCAGTCCCTCCTAGGGGCAGTCGTTCTCACAGCCCATTaGTCGCCCAGGACCCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: ATHLASIRHQDQSLLGAVVLTAH*SPRTRA Trigger: GGCCCGGGTCCTGGGCGAGCAATGGGCTGTGAGAAC...GACTGCCCCTAGGAGGGACTGGTCTTGGTGGCGGATACTTGCTAAGTGTGTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053670.12 ENSMUST00000170879.4 |
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| CDS-3UTR GCA 90 bp | AGTATCCGCCACCAAGACCAGTCCCTCCTAGGGGCAGTCCTCTGGATAGGGAAGGGTTCTGGCTCTGCCTaGGGTGTCGCTGCTCCCCGA | + |
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Preference number: 4 (lower is better) Translates to: SIRHQDQSLLGAVLWIGKGSGSA*GVAAPR Trigger: TCGGGGAGCAGCGACACCGCAGGCAGAGCCAGAACC...CTTCCCTATCCAGAGGACTGCCCCTAGGAGGGACTGGTCTTGGTGGCGGATACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053670.12 ENSMUST00000170879.4 |
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| CDS-3UTR GCA 90 bp | GCCACACACTTAGCAAGTATCCGCCACCAAGACCAGTCCCTCCTAGGGGCAGTCGGTTCTGGCTCTGCCTaGGGTGTCGCTGCTCCCCGA | + |
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Preference number: 4 (lower is better) Translates to: ATHLASIRHQDQSLLGAVGSGSA*GVAAPR Trigger: TCGGGGAGCAGCGACACCGCAGGCAGAGCCAGAACC...GACTGCCCCTAGGAGGGACTGGTCTTGGTGGCGGATACTTGCTAAGTGTGTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053670.12 ENSMUST00000170879.4 |
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| CDS-3UTR GCA 90 bp | GGCAGGCGGATTTCTGAGTTCGAGGACAGCCTGGTCTACAGAATGAGTTCCAGGGCCCGGGCCTGCAGCTaGTGTTCCAGCTCCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GRRISEFEDSLVYRMSSRARACS*CSSSRC Trigger: GCAGCGGGAGCTGGAACAGCAGCTGCAGGCCCGGGC...CCTGGAACTCATTCTGTAGACCAGGCTGTCCTCGAACTCAGAAATCCGCCTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS-3UTR TCA 90 bp | AGCAAGTATCCGCCACCAAGACCAGTCCCTCCTAGGGGCAGTCCTCTGGATAGGAGAACTCCCGGGCTGTaGGGAAGCCAGTGTGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: SKYPPPRPVPPRGSPLDRRTPGL*GSQCGP Trigger: AGGCCCACACTGGCTTCCTCACAGCCCGGGAGTTCT...CCTATCCAGAGGACTGCCCCTAGGAGGGACTGGTCTTGGTGGCGGATACTTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053670.12 ENSMUST00000170879.4 |
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| CDS-3UTR GCA 90 bp | AGCCCAGCCACAGCAGCAGCAGCAGTAGATGGGTCCGGGCTTGTGGGCAATAGCAGTTCCTGGGCCTGCTaGAGCACCTCTACTCCATGC | + |
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Preference number: 4 (lower is better) Translates to: SPATAAAAVDGSGLVGNSSSWAC*STSTPC Trigger: GCATGGAGTAGAGGTGCTGCAGCAGGCCCAGGAACT...GCTATTGCCCACAAGCCCGGACCCATCTACTGCTGCTGCTGCTGTGGCTGGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170879.4 |
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| CDS-3UTR GCA 90 bp | CCGCCACCAAGACCAGTCCCTCCTAGGGGCAGTCCTCTGGATAGGGAAGTGAGTCTCCAGGCAGGCCGATaGGCGCATCAGAACTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: PPPRPVPPRGSPLDREVSLQAGR*AHQNFL Trigger: GAGGAAGTTCTGATGCGCGCATCGGCCTGCCTGGAG...ACTCACTTCCCTATCCAGAGGACTGCCCCTAGGAGGGACTGGTCTTGGTGGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053670.12 ENSMUST00000170879.4 |
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| CDS-3UTR GCA 90 bp | AGTATCCGCCACCAAGACCAGTCCCTCCTAGGGGCAGTCCTCTGGATAGGGAAGTCCTGCTCACGGGTCTaGAGCTCCAGCTCCAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SIRHQDQSLLGAVLWIGKSCSRV*SSSSRW Trigger: CCACCTGGAGCTGGAGCTGCAGACCCGTGAGCAGGA...CTTCCCTATCCAGAGGACTGCCCCTAGGAGGGACTGGTCTTGGTGGCGGATACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053670.12 ENSMUST00000170879.4 |
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| CDS-3UTR CCA 90 bp | ATTAAGGAAGACAGGATAGCCGGGCGTGGTGGCACACGCGCCTTTAATCCCAGCAGCTCCAGCTCCAGGTaGCCCCTCTGTTCCTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: IKEDRIAGRGGTRAFNPSSSSSR*PLCSSR Trigger: CCGGGAGGAACAGAGGGGCCACCTGGAGCTGGAGCT...GCTGGGATTAAAGGCGCGTGTGCCACCACGCCCGGCTATCCTGTCTTCCTTAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS-3UTR CCA 90 bp | GCCACACACTTAGCAAGTATCCGCCACCAAGACCAGTCCCTCCTAGGGGCAGTCCGACTGAGCTGCTCTTaGGCCTGGTCCAGCTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: ATHLASIRHQDQSLLGAVRLSCS*AWSSCA Trigger: GGCACAGCTGGACCAGGCCCAAGAGCAGCTCAGTCG...GACTGCCCCTAGGAGGGACTGGTCTTGGTGGCGGATACTTGCTAAGTGTGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS-3UTR GCA 90 bp | GGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGACAGCCTGGTCTACAGAATGTCCTGCTCACGGGTCTaGAGCTCCAGCTCCAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GGRGRRISEFEDSLVYRMSCSRV*SSSSRW Trigger: CCACCTGGAGCTGGAGCTGCAGACCCGTGAGCAGGA...CATTCTGTAGACCAGGCTGTCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS-3UTR GCA 90 bp | AGCAAGTATCCGCCACCAAGACCAGTCCCTCCTAGGGGCAGTCCTCTGGATAGGCTTTGGGTTTGCTCCTaGCGACCCTGTGCTTCGCCC | + |
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Preference number: 4 (lower is better) Translates to: SKYPPPRPVPPRGSPLDRLWVCS*RPCASP Trigger: GGGCGAAGCACAGGGTCGGCAGGAGCAAACCCAAAG...CCTATCCAGAGGACTGCCCCTAGGAGGGACTGGTCTTGGTGGCGGATACTTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS-3UTR CCA 90 bp | ACTGAAGGACTGAAGGCCTTGACTACTCTGAGGTTAGCTCCTTCAGGCATGGGACAAGGGGGACCCACCTaGGGCCGACTCCACCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: TEGLKALTTLRLAPSGMGQGGPT*GRLHPH Trigger: GTGGGGGTGGAGTCGGCCCCAGGTGGGTCCCCCTTG...TCCCATGCCTGAAGGAGCTAACCTCAGAGTAGTCAAGGCCTTCAGTCCTTCAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS-3UTR CCA 90 bp | GCAAGTATCCGCCACCAAGACCAGTCCCTCCTAGGGGCAGTCCTCTGGATAGGGAGTAGGAAGAGTTCCTaGGCCTGCTGCAGCACCTCT | + |
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Preference number: 4 (lower is better) Translates to: ASIRHQDQSLLGAVLWIGSRKSS*ACCSTS Trigger: AGAGGTGCTGCAGCAGGCCCAGGAACTCTTCCTACT...CCCTATCCAGAGGACTGCCCCTAGGAGGGACTGGTCTTGGTGGCGGATACTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053670.12 ENSMUST00000170879.4 |
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| CDS-3UTR CCA 90 bp | TTGACTACTCTGAGGTTAGCTCCTTCAGGCATGGGATGCCTTCTGGGTAGAGCCAGCTCCAGCTCCAGGTaGCCCCTCTGTTCCTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: LTTLRLAPSGMGCLLGRASSSSR*PLCSSR Trigger: CCGGGAGGAACAGAGGGGCCACCTGGAGCTGGAGCT...GGCTCTACCCAGAAGGCATCCCATGCCTGAAGGAGCTAACCTCAGAGTAGTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053670.12 ENSMUST00000170879.4 |
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| CDS-3UTR CCA 90 bp | ACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGACAGCCTGGTCTACAGCTAGAGCCTTCCTGTaGCTACTGCCCAGCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: TREAEAGGFLSSRTAWSTARAFL*LLPSSL Trigger: CAAGCTGCTGGGCAGTAGCCACAGGAAGGCTCTAGC...TGTAGACCAGGCTGTCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS-3UTR TCA 90 bp | AGGATAGCCGGGCGTGGTGGCACACGCGCCTTTAATCCCAGCACTCGGGAGGCAGCTGCCTTAGGAGGCTaGGTTTCTCTTTCTGCATAT | + |
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Preference number: 4 (lower is better) Translates to: RIAGRGGTRAFNPSTREAAALGG*VSLSAY Trigger: ATATGCAGAAAGAGAAACTCAGCCTCCTAAGGCAGC...TGCCTCCCGAGTGCTGGGATTAAAGGCGCGTGTGCCACCACGCCCGGCTATCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053670.12 ENSMUST00000116247.3 |
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| CDS-3UTR GCA 90 bp | ACTGAAGGACTGAAGGCCTTGACTACTCTGAGGTTAGCTCCTTCAGGCATGGGATCTGCAGCCCGGGCCTaGAGCTGCTGTTCCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: TEGLKALTTLRLAPSGMGSAARA*SCCSSS Trigger: GGAGCTGGAACAGCAGCTGCAGGCCCGGGCTGCAGA...TCCCATGCCTGAAGGAGCTAACCTCAGAGTAGTCAAGGCCTTCAGTCCTTCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS-3UTR CCA 90 bp | ATTAAGGAAGACAGGATAGCCGGGCGTGGTGGCACACGCGCCTTTAATCCCAGCTGCAGCTGGATGTGCTaGGCCTGTGCCTCTAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: IKEDRIAGRGGTRAFNPSCSWMC*ACASSC Trigger: ACAGCTAGAGGCACAGGCCCAGCACATCCAGCTGCA...GCTGGGATTAAAGGCGCGTGTGCCACCACGCCCGGCTATCCTGTCTTCCTTAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS-3UTR CCA 90 bp | AGTATCCGCCACCAAGACCAGTCCCTCCTAGGGGCAGTCCTCTGGATAGGGAAGGCAACCACATCTCTTTaGGTTTGCTCCTGCCGACCC | + |
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Preference number: 4 (lower is better) Translates to: SIRHQDQSLLGAVLWIGKATTSL*VCSCRP Trigger: GGGTCGGCAGGAGCAAACCCAAAGAGATGTGGTTGC...CTTCCCTATCCAGAGGACTGCCCCTAGGAGGGACTGGTCTTGGTGGCGGATACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS-3UTR GCA 90 bp | AGTATCCGCCACCAAGACCAGTCCCTCCTAGGGGCAGTCCTCTGGATAGGGAAGACATCTCTTTGGGTTTaGTCCTGCCGACCCTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: SIRHQDQSLLGAVLWIGKTSLWV*SCRPCA Trigger: AGCACAGGGTCGGCAGGAGCAAACCCAAAGAGATGT...CTTCCCTATCCAGAGGACTGCCCCTAGGAGGGACTGGTCTTGGTGGCGGATACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS-3UTR GCA 90 bp | GGCAGGCGGATTTCTGAGTTCGAGGACAGCCTGGTCTACAGAATGAGTTCCAGGCCTTCCTGTGGCTACTaGCCAGCAGCTTGGTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: GRRISEFEDSLVYRMSSRPSCGY*PAAWSH Trigger: GTGAGACCAAGCTGCTGGGCAGTAGCCACAGGAAGG...CCTGGAACTCATTCTGTAGACCAGGCTGTCCTCGAACTCAGAAATCCGCCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS-3UTR CCA 90 bp | ACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGACAGCCTGGTCTACATACTGCCCAGCAGCTTaGTCTCACAGGCATCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: TREAEAGGFLSSRTAWSTYCPAA*SHRHLS Trigger: AGAGAGATGCCTGTGAGACCAAGCTGCTGGGCAGTA...TGTAGACCAGGCTGTCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS-3UTR CCA 90 bp | GAAGGCCTTGACTACTCTGAGGTTAGCTCCTTCAGGCATGGGATGCCTTCTGGGAGTAGGAAGAGTTCCTaGGCCTGCTGCAGCACCTCT | + |
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Preference number: 4 (lower is better) Translates to: EGLDYSEVSSFRHGMPSGSRKSS*ACCSTS Trigger: AGAGGTGCTGCAGCAGGCCCAGGAACTCTTCCTACT...CCCAGAAGGCATCCCATGCCTGAAGGAGCTAACCTCAGAGTAGTCAAGGCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS-3UTR CCA 90 bp | CCAGTCCCTCCTAGGGGCAGTCCTCTGGATAGGGAAGTGAGTCACTCGGGGCTGCTTTCTGCATATTCCTaGAGACAGCAACCACATCTC | + |
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Preference number: 4 (lower is better) Translates to: PVPPRGSPLDREVSHSGLLSAYS*RQQPHL Trigger: GAGATGTGGTTGCTGTCTCCAGGAATATGCAGAAAG...CAGCCCCGAGTGACTCACTTCCCTATCCAGAGGACTGCCCCTAGGAGGGACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053670.12 ENSMUST00000116247.3 ENSMUST00000170879.4 |
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| CDS-3UTR TCA 90 bp | AGCAAGTATCCGCCACCAAGACCAGTCCCTCCTAGGGGCAGTCCTCTGGATAGGGCTGCCTTAGGAGGCTaGGTTTCTCTTTCTGCATAT | + |
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Preference number: 4 (lower is better) Translates to: SKYPPPRPVPPRGSPLDRAALGG*VSLSAY Trigger: ATATGCAGAAAGAGAAACTCAGCCTCCTAAGGCAGC...CCTATCCAGAGGACTGCCCCTAGGAGGGACTGGTCTTGGTGGCGGATACTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053670.12 ENSMUST00000116247.3 ENSMUST00000170879.4 |
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| CDS-3UTR CCA 90 bp | CCACCAAGACCAGTCCCTCCTAGGGGCAGTCCTCTGGATAGGGAAGTGAGTCACAAGCCAGTGTGGGCCTaGTCCAGACTTTCAAATACA | + |
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Preference number: 4 (lower is better) Translates to: PPRPVPPRGSPLDREVSHKPVWA*SRLSNT Trigger: TGTATTTGAAAGTCTGGACCAGGCCCACACTGGCTT...GTGACTCACTTCCCTATCCAGAGGACTGCCCCTAGGAGGGACTGGTCTTGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053670.12 ENSMUST00000170879.4 |
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| CDS-3UTR CCA 90 bp | AGCAAGTATCCGCCACCAAGACCAGTCCCTCCTAGGGGCAGTCCTCTGGATAGGAAGCCAGTGTGGGCCTaGTCCAGACTTTCAAATACA | + |
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Preference number: 4 (lower is better) Translates to: SKYPPPRPVPPRGSPLDRKPVWA*SRLSNT Trigger: TGTATTTGAAAGTCTGGACCAGGCCCACACTGGCTT...CCTATCCAGAGGACTGCCCCTAGGAGGGACTGGTCTTGGTGGCGGATACTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053670.12 ENSMUST00000170879.4 |
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| CDS-3UTR GCA 90 bp | CCTTTATTGGTCCTTCAGACAAAGATTAAGGAAGACAGGATAGCCGGGCGTGGTAGTTCCTGGGCCTGCTaGAGCACCTCTACTCCATGC | + |
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Preference number: 4 (lower is better) Translates to: PLLVLQTKIKEDRIAGRGSSWAC*STSTPC Trigger: GCATGGAGTAGAGGTGCTGCAGCAGGCCCAGGAACT...ACCACGCCCGGCTATCCTGTCTTCCTTAATCTTTGTCTGAAGGACCAATAAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS-3UTR CCA 90 bp | ATTAAGGAAGACAGGATAGCCGGGCGTGGTGGCACACGCGCCTTTAATCCCAGCCTTTCTGCATATTCCTaGAGACAGCAACCACATCTC | + |
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Preference number: 4 (lower is better) Translates to: IKEDRIAGRGGTRAFNPSLSAYS*RQQPHL Trigger: GAGATGTGGTTGCTGTCTCCAGGAATATGCAGAAAG...GCTGGGATTAAAGGCGCGTGTGCCACCACGCCCGGCTATCCTGTCTTCCTTAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053670.12 ENSMUST00000116247.3 |
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| CDS-3UTR GCA 90 bp | ATACAATGGCCTTTATTGGTCCTTCAGACAAAGATTAAGGAAGACAGGATAGCCGGTAGGTTCTGGCTCTaGCTGCGGTGTCGCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: IQWPLLVLQTKIKEDRIAGRFWL*LRCRCS Trigger: GGAGCAGCGACACCGCAGGCAGAGCCAGAACCTACC...GGCTATCCTGTCTTCCTTAATCTTTGTCTGAAGGACCAATAAAGGCCATTGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS-3UTR CCA 90 bp | TTGACTACTCTGAGGTTAGCTCCTTCAGGCATGGGATGCCTTCTGGGTAGAGCCCTTTCTGCATATTCCTaGAGACAGCAACCACATCTC | + |
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Preference number: 4 (lower is better) Translates to: LTTLRLAPSGMGCLLGRALSAYS*RQQPHL Trigger: GAGATGTGGTTGCTGTCTCCAGGAATATGCAGAAAG...GGCTCTACCCAGAAGGCATCCCATGCCTGAAGGAGCTAACCTCAGAGTAGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053670.12 ENSMUST00000116247.3 ENSMUST00000170879.4 |
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| 3UTR CAA 72 bp | AAGGAAGACAGGATAAAGACTGAAGGACTGAAGGCCTaGACTACTCTGAGGTTAGCTCCTTCAGGCATGGGA | + |
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Preference number: 4 (lower is better) Translates to: KEDRIKTEGLKA*TTLRLAPSGMG Trigger: TCCCATGCCTGAAGGAGCTAACCTCAGAGTAGTCAAGGCCTTCAGTCCTTCAGTCTTTATCCTGTCTTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053670.12 ENSMUST00000116247.3 |
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| CDS GCA 90 bp | TGCTGTTCCAGCTCCCGCTGCCTCAGGCCTGCGCGCTCCAACTCCTaGTCACGGGTCTGCAGCTCCAGCTCCAGGTGGCCCCTCTGTTCC | + |
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Preference number: 5 (lower is better) Translates to: CCSSSRCLRPARSNS*SRVCSSSSRWPLCS Trigger: GGAACAGAGGGGCCACCTGGAGCTGGAGCTGCAGACCCGTGAGCAGGAGTTGGAGCGCGCAGGCCTGAGGCAGCGGGAGCTGGAACAGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS GCA 90 bp | GGTCGCTCGCGCTGCAGCCCGACCCAGAGGGTTCTCACAGCCCATTaGTCGCCCAGGACCCGGGCCACTCCTAGCTTCTCCAAGGAAGTG | + |
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Preference number: 5 (lower is better) Translates to: GRSRCSPTQRVLTAH*SPRTRATPSFSKEV Trigger: CACTTCCTTGGAGAAGCTAGGAGTGGCCCGGGTCCTGGGCGAGCAATGGGCTGTGAGAACCCTCTGGGTCGGGCTGCAGCGCGAGCGACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053670.12 ENSMUST00000167491.8 ENSMUST00000170879.4 |
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| CDS GCA 90 bp | CAACCACATCTCTCCCGCTGCCTCAGGCCTGCGCGCTCCAACTCCTaGTCACGGGTCTGCAGCTCCAGCTCCAGGTGGCCCCTCTGTTCC | + |
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Preference number: 5 (lower is better) Translates to: QPHLSRCLRPARSNS*SRVCSSSSRWPLCS Trigger: GGAACAGAGGGGCCACCTGGAGCTGGAGCTGCAGACCCGTGAGCAGGAGTTGGAGCGCGCAGGCCTGAGGCAGCGGGAGAGATGTGGTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170879.4 |
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| CDS GCA 90 bp | CGGGGTAGGTTCTGGCTCTGCCTGCGGTGTCGCTGCTCCCCGAGCTaGTGCTCCAGTTCTTCATACAGTCCGCGCACCTCCCTCTCGTGT | + |
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Preference number: 5 (lower is better) Translates to: RGRFWLCLRCRCSPS*CSSSSYSPRTSLSC Trigger: ACACGAGAGGGAGGTGCGCGGACTGTATGAAGAACTGGAGCAGCAGCTCGGGGAGCAGCGACACCGCAGGCAGAGCCAGAACCTACCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053670.12 ENSMUST00000170879.4 |
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| CDS-3UTR CAA 90 bp | GGTCCGGGCTTGTGGGCAATAGCTAGAGCCTTCCTGTGGCTACTGCCCAGCAGCTTGCCGAGACCCCTGTaGTCTCCTCTCCCTCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: GPGLWAIARAFLWLLPSSLPRPL*SPLPPG Trigger: GCCAGGAGGGAGAGGAGACAACAGGGGTCTCGGCAA...GCTGCTGGGCAGTAGCCACAGGAAGGCTCTAGCTATTGCCCACAAGCCCGGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170879.4 |
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| CDS-3UTR CAA 90 bp | CCAGTCCCTCCTAGGGGCAGTCCTCTGGATAGGGAAGTGAGTCACTCGGGGCTGTCGACTGAGCTGCTCTaGGGCCTGGTCCAGCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: PVPPRGSPLDREVSHSGLSTELL*GLVQLC Trigger: GCACAGCTGGACCAGGCCCAAGAGCAGCTCAGTCGA...CAGCCCCGAGTGACTCACTTCCCTATCCAGAGGACTGCCCCTAGGAGGGACTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS GCA 90 bp | GGTAGGTTCTGGCTCTGCCTGCGGTGTCGCTGCTCCCCGAGCTGCTaGTCCAGTTCTTCATACAGTCCGCGCACCTCCCTCTCGTGTTCA | + |
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Preference number: 5 (lower is better) Translates to: GRFWLCLRCRCSPSC*SSSSYSPRTSLSCS Trigger: TGAACACGAGAGGGAGGTGCGCGGACTGTATGAAGAACTGGAGCAGCAGCTCGGGGAGCAGCGACACCGCAGGCAGAGCCAGAACCTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053670.12 ENSMUST00000170879.4 |
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| CDS GCA 90 bp | ATATTCCTGGAGACAGCAACCACATCTCTCCCGCTGCCTCAGGCCTaGGCGCTCCAACTCCTGCTCACGGGTCTGCAGCTCCAGCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: IFLETATTSLPLPQA*ALQLLLTGLQLQLQ Trigger: CTGGAGCTGGAGCTGCAGACCCGTGAGCAGGAGTTGGAGCGCGCAGGCCTGAGGCAGCGGGAGAGATGTGGTTGCTGTCTCCAGGAATAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170879.4 |
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| CDS-3UTR CAA 90 bp | AGGATAGCCGGGCGTGGTGGCACACGCGCCTTTAATCCCAGCACTCGGGAGGCACACATCTCTTTGGGTTaGCTCCTGCCGACCCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: RIAGRGGTRAFNPSTREAHISLG*LLPTLC Trigger: GCACAGGGTCGGCAGGAGCAAACCCAAAGAGATGTG...TGCCTCCCGAGTGCTGGGATTAAAGGCGCGTGTGCCACCACGCCCGGCTATCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS GCA 90 bp | GGAGACAGCAACCACATCTCTTTGGGTTTGCTCCTGCCGACCCTGTaGTTCGCCCTCCAGTCGACTGAGCTGCTCTTGGGCCTGGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: GDSNHISLGLLLPTL*FALQSTELLLGLVQ Trigger: CTGGACCAGGCCCAAGAGCAGCTCAGTCGACTGGAGGGCGAAGCACAGGGTCGGCAGGAGCAAACCCAAAGAGATGTGGTTGCTGTCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS-3UTR CAA 90 bp | GCCACACACTTAGCAAGTATCCGCCACCAAGACCAGTCCCTCCTAGGGGCAGTCTTGCCGAGACCCCTGTaGTCTCCTCTCCCTCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: ATHLASIRHQDQSLLGAVLPRPL*SPLPPG Trigger: GCCAGGAGGGAGAGGAGACAACAGGGGTCTCGGCAA...GACTGCCCCTAGGAGGGACTGGTCTTGGTGGCGGATACTTGCTAAGTGTGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053670.12 ENSMUST00000170879.4 |
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| CDS GCA 90 bp | TCTCTTTCTGCATATTCCTGGAGACAGCAACCACATCTCTCCCGCTaGCTCAGGCCTGCGCGCTCCAACTCCTGCTCACGGGTCTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: SLSAYSWRQQPHLSR*LRPARSNSCSRVCS Trigger: GCTGCAGACCCGTGAGCAGGAGTTGGAGCGCGCAGGCCTGAGGCAGCGGGAGAGATGTGGTTGCTGTCTCCAGGAATATGCAGAAAGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170879.4 |
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| CDS-3UTR CAA 90 bp | CCAGTCCCTCCTAGGGGCAGTCCTCTGGATAGGGAAGTGAGTCACTCGGGGCTGAGCAACCACATCTCTTaGGGTTTGCTCCTGCCGACC | + |
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Preference number: 5 (lower is better) Translates to: PVPPRGSPLDREVSHSGLSNHIS*GLLLPT Trigger: GGTCGGCAGGAGCAAACCCAAAGAGATGTGGTTGCT...CAGCCCCGAGTGACTCACTTCCCTATCCAGAGGACTGCCCCTAGGAGGGACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS TCA 90 bp | CCACCCCCACAAACTTCCCCAGGCCTAGACAGAACTCCCGGGCTGTaGGGAAGCCAGTGTGGGCCTGGTCCAGACTTTCAAATACAGCCT | + |
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Preference number: 5 (lower is better) Translates to: PPPQTSPGLDRTPGL*GSQCGPGPDFQIQP Trigger: AGGCTGTATTTGAAAGTCTGGACCAGGCCCACACTGGCTTCCTCACAGCCCGGGAGTTCTGTCTAGGCCTGGGGAAGTTTGTGGGGGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000053670.12 ENSMUST00000167491.8 ENSMUST00000170879.4 ENSMUST00000172215.8 |
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| CDS-3UTR CAA 90 bp | AGTATCCGCCACCAAGACCAGTCCCTCCTAGGGGCAGTCCTCTGGATAGGGAAGCCTCTACTCCATGCCTaGCCGAGACCCCTGTTGTCT | + |
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Preference number: 5 (lower is better) Translates to: SIRHQDQSLLGAVLWIGKPLLHA*PRPLLS Trigger: AGACAACAGGGGTCTCGGCAAGGCATGGAGTAGAGG...CTTCCCTATCCAGAGGACTGCCCCTAGGAGGGACTGGTCTTGGTGGCGGATACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053670.12 ENSMUST00000170879.4 |
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| CDS CCA 90 bp | GTGATGAAGCCCTTGGCATCCTTGTCGCATAGTAGGAAGAGTTCCTaGGCCTGCTGCAGCACCTCTACTCCATGCCTTGCCGAGACCCCT | + |
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Preference number: 5 (lower is better) Translates to: VMKPLASLSHSRKSS*ACCSTSTPCLAETP Trigger: AGGGGTCTCGGCAAGGCATGGAGTAGAGGTGCTGCAGCAGGCCCAGGAACTCTTCCTACTATGCGACAAGGATGCCAAGGGCTTCATCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053670.12 ENSMUST00000167491.8 ENSMUST00000170879.4 ENSMUST00000172215.8 |
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| CDS-3UTR CAA 90 bp | GGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGACAGCCTGGTCTACAGAATGCCTCTACTCCATGCCTaGCCGAGACCCCTGTTGTCT | + |
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Preference number: 5 (lower is better) Translates to: GGRGRRISEFEDSLVYRMPLLHA*PRPLLS Trigger: AGACAACAGGGGTCTCGGCAAGGCATGGAGTAGAGG...CATTCTGTAGACCAGGCTGTCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS-3UTR CAA 90 bp | ACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGACAGCCTGGTCTACACGAGTGATGAAGCCCTaGGCATCCTTGTCGCATAGT | + |
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Preference number: 5 (lower is better) Translates to: TREAEAGGFLSSRTAWSTRVMKP*ASLSHS Trigger: ACTATGCGACAAGGATGCCAAGGGCTTCATCACTCG...TGTAGACCAGGCTGTCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS TCA 90 bp | TGTTCAGGCGTAAGTGGAAGATCACTCTGCAGACCCTGCAGATCCTaGCGAGTGATGAAGCCCTTGGCATCCTTGTCGCATAGTAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: CSGVSGRSLCRPCRS*RVMKPLASLSHSRK Trigger: CTTCCTACTATGCGACAAGGATGCCAAGGGCTTCATCACTCGTCAGGATCTGCAGGGTCTGCAGAGTGATCTTCCACTTACGCCTGAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053670.12 ENSMUST00000167491.8 ENSMUST00000170879.4 ENSMUST00000172215.8 |
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| CDS CCA 90 bp | CTGGTCCAGACTTTCAAATACAGCCTCCAGCTGTTCAGGCGTAAGTaGAAGATCACTCTGCAGACCCTGCAGATCCTGACGAGTGATGAA | + |
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Preference number: 5 (lower is better) Translates to: LVQTFKYSLQLFRRK*KITLQTLQILTSDE Trigger: TTCATCACTCGTCAGGATCTGCAGGGTCTGCAGAGTGATCTTCCACTTACGCCTGAACAGCTGGAGGCTGTATTTGAAAGTCTGGACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053670.12 ENSMUST00000167491.8 ENSMUST00000170879.4 ENSMUST00000172215.8 |
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| CDS GCA 72 bp | AGCTCCCGCTGCCTCAGGCCTGCGCGCTCCAACTCCTaGTCACGGGTCTGCAGCTCCAGCTCCAGGTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: SSRCLRPARSNS*SRVCSSSSRWP Trigger: GGGCCACCTGGAGCTGGAGCTGCAGACCCGTGAGCAGGAGTTGGAGCGCGCAGGCCTGAGGCAGCGGGAGCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS GCA 72 bp | CTCTCCCGCTGCCTCAGGCCTGCGCGCTCCAACTCCTaGTCACGGGTCTGCAGCTCCAGCTCCAGGTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: LSRCLRPARSNS*SRVCSSSSRWP Trigger: GGGCCACCTGGAGCTGGAGCTGCAGACCCGTGAGCAGGAGTTGGAGCGCGCAGGCCTGAGGCAGCGGGAGAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170879.4 |
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| CDS GCA 72 bp | TCCCTCTCGTGTTCACTCTCCCGCCGTCGCAGCGCTTaGTCAAGACCTTCGCGTTCCCGGGCCGCCGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SLSCSLSRRRSA*SRPSRSRAAAS Trigger: GGAGGCGGCGGCCCGGGAACGCGAAGGTCTTGAGCAAGCGCTGCGACGGCGGGAGAGTGAACACGAGAGGGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053670.12 ENSMUST00000167491.8 ENSMUST00000170879.4 |
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| CDS GCA 72 bp | CGCTGCAGCCCGACCCAGAGGGTTCTCACAGCCCATTaGTCGCCCAGGACCCGGGCCACTCCTAGCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: RCSPTQRVLTAH*SPRTRATPSFS Trigger: GGAGAAGCTAGGAGTGGCCCGGGTCCTGGGCGAGCAATGGGCTGTGAGAACCCTCTGGGTCGGGCTGCAGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053670.12 ENSMUST00000167491.8 ENSMUST00000170879.4 |
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| CDS GCA 72 bp | CTGCAGCTGCTGTTCCAGCTCCCGCTGCCTCAGGCCTaGGCGCTCCAACTCCTGCTCACGGGTCTGCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: LQLLFQLPLPQA*ALQLLLTGLQL Trigger: GAGCTGCAGACCCGTGAGCAGGAGTTGGAGCGCGCAGGCCTGAGGCAGCGGGAGCTGGAACAGCAGCTGCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS GCA 72 bp | TGGGCCTGTGCCTCTAGCTGTTCTGCAGCCCGGGCCTaGAGCTGCTGTTCCAGCTCCCGCTGCCTCAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: WACASSCSAARA*SCCSSSRCLRP Trigger: AGGCCTGAGGCAGCGGGAGCTGGAACAGCAGCTGCAGGCCCGGGCTGCAGAACAGCTAGAGGCACAGGCCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS GCA 72 bp | CCCTCTGTTCCTCCCGGGGTAGGTTCTGGCTCTGCCTaGGGTGTCGCTGCTCCCCGAGCTGCTGCTCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: PSVPPGVGSGSA*GVAAPRAAAPV Trigger: AACTGGAGCAGCAGCTCGGGGAGCAGCGACACCGCAGGCAGAGCCAGAACCTACCCCGGGAGGAACAGAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053670.12 ENSMUST00000170879.4 |
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| CDS GCA 72 bp | TGCCGACCCTGTGCTTCGCCCTCCAGTCGACTGAGCTaGTCTTGGGCCTGGTCCAGCTGTGCCCGTATGGCC | + |
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Preference number: 6 (lower is better) Translates to: CRPCASPSSRLS*SWAWSSCARMA Trigger: GGCCATACGGGCACAGCTGGACCAGGCCCAAGAGCAGCTCAGTCGACTGGAGGGCGAAGCACAGGGTCGGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS CAA 90 bp | CTCCTGCCGACCCTGTGCTTCGCCCTCCAGTCGACTGAGCTGCTCTaGGGCCTGGTCCAGCTGTGCCCGTATGGCCTCATAGGCCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLPTLCFALQSTELL*GLVQLCPYGLIGPL Trigger: CAGAGGGCCTATGAGGCCATACGGGCACAGCTGGACCAGGCCCAAGAGCAGCTCAGTCGACTGGAGGGCGAAGCACAGGGTCGGCAGGAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS GCA 72 bp | GAGACAGCAACCACATCTCTCCCGCTGCCTCAGGCCTaGGCGCTCCAACTCCTGCTCACGGGTCTGCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ETATTSLPLPQA*ALQLLLTGLQL Trigger: GAGCTGCAGACCCGTGAGCAGGAGTTGGAGCGCGCAGGCCTGAGGCAGCGGGAGAGATGTGGTTGCTGTCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170879.4 |
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| CDS GCA 72 bp | TTCCTGGGCCTGCTGCAGCACCTCTACTCCATGCCTTaGCGAGACCCCTGTTGTCTCCTCTCCCTCCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: FLGLLQHLYSMP*RDPCCLLSLLA Trigger: GGCCAGGAGGGAGAGGAGACAACAGGGGTCTCGGCAAGGCATGGAGTAGAGGTGCTGCAGCAGGCCCAGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053670.12 ENSMUST00000167491.8 ENSMUST00000170879.4 ENSMUST00000172215.8 |
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| CDS GCA 72 bp | TTCTGGCTCTGCCTGCGGTGTCGCTGCTCCCCGAGCTaGTGCTCCAGTTCTTCATACAGTCCGCGCACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FWLCLRCRCSPS*CSSSSYSPRTS Trigger: GGAGGTGCGCGGACTGTATGAAGAACTGGAGCAGCAGCTCGGGGAGCAGCGACACCGCAGGCAGAGCCAGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053670.12 ENSMUST00000170879.4 |
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| CDS CAA 72 bp | GTTCCTGGGCCTGCTGCAGCACCTCTACTCCATGCCTaGCCGAGACCCCTGTTGTCTCCTCTCCCTCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: VPGPAAAPLLHA*PRPLLSPLPPG Trigger: GCCAGGAGGGAGAGGAGACAACAGGGGTCTCGGCAAGGCATGGAGTAGAGGTGCTGCAGCAGGCCCAGGAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053670.12 ENSMUST00000167491.8 ENSMUST00000170879.4 ENSMUST00000172215.8 |
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| CDS GCA 72 bp | AAGAGTTCCTGGGCCTGCTGCAGCACCTCTACTCCATaGCTTGCCGAGACCCCTGTTGTCTCCTCTCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: KSSWACCSTSTP*LAETPVVSSPS Trigger: GGAGGGAGAGGAGACAACAGGGGTCTCGGCAAGGCATGGAGTAGAGGTGCTGCAGCAGGCCCAGGAACTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053670.12 ENSMUST00000167491.8 ENSMUST00000170879.4 ENSMUST00000172215.8 |
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| CDS GCA 72 bp | AACCACATCTCTTTGGGTTTGCTCCTGCCGACCCTGTaGTTCGCCCTCCAGTCGACTGAGCTGCTCTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: NHISLGLLLPTL*FALQSTELLLG Trigger: GCCCAAGAGCAGCTCAGTCGACTGGAGGGCGAAGCACAGGGTCGGCAGGAGCAAACCCAAAGAGATGTGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS GCA 72 bp | CTGGAGACAGCAACCACATCTCTTTGGGTTTGCTCCTaGCGACCCTGTGCTTCGCCCTCCAGTCGACTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LETATTSLWVCS*RPCASPSSRLS Trigger: GCTCAGTCGACTGGAGGGCGAAGCACAGGGTCGGCAGGAGCAAACCCAAAGAGATGTGGTTGCTGTCTCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053670.12 |
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| CDS TCA 72 bp | CAAACTTCCCCAGGCCTAGACAGAACTCCCGGGCTGTaGGGAAGCCAGTGTGGGCCTGGTCCAGACTTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: QTSPGLDRTPGL*GSQCGPGPDFQ Trigger: TTGAAAGTCTGGACCAGGCCCACACTGGCTTCCTCACAGCCCGGGAGTTCTGTCTAGGCCTGGGGAAGTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053670.12 ENSMUST00000167491.8 ENSMUST00000170879.4 ENSMUST00000172215.8 |
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| CDS CCA 72 bp | CCCTTGGCATCCTTGTCGCATAGTAGGAAGAGTTCCTaGGCCTGCTGCAGCACCTCTACTCCATGCCTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PLASLSHSRKSS*ACCSTSTPCLA Trigger: GGCAAGGCATGGAGTAGAGGTGCTGCAGCAGGCCCAGGAACTCTTCCTACTATGCGACAAGGATGCCAAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053670.12 ENSMUST00000167491.8 ENSMUST00000170879.4 ENSMUST00000172215.8 |
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| CDS TCA 72 bp | GTAAGTGGAAGATCACTCTGCAGACCCTGCAGATCCTaGCGAGTGATGAAGCCCTTGGCATCCTTGTCGCAT | + |
|
Preference number: 6 (lower is better) Translates to: VSGRSLCRPCRS*RVMKPLASLSH Trigger: ATGCGACAAGGATGCCAAGGGCTTCATCACTCGTCAGGATCTGCAGGGTCTGCAGAGTGATCTTCCACTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053670.12 ENSMUST00000167491.8 ENSMUST00000170879.4 ENSMUST00000172215.8 |
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| CDS CCA 72 bp | ACTTTCAAATACAGCCTCCAGCTGTTCAGGCGTAAGTaGAAGATCACTCTGCAGACCCTGCAGATCCTGACG | + |
|
Preference number: 6 (lower is better) Translates to: TFKYSLQLFRRK*KITLQTLQILT Trigger: CGTCAGGATCTGCAGGGTCTGCAGAGTGATCTTCCACTTACGCCTGAACAGCTGGAGGCTGTATTTGAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053670.12 ENSMUST00000167491.8 ENSMUST00000170879.4 ENSMUST00000172215.8 |
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