RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CRACR2A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000061414

Ensembl transcript IDs: ENSMUST00000071563.5, ENSMUST00000212051.2

Found 264 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGCTGCCCCAGTCCTGGAGAACGACAGAGAAGAGAAGCAGAGACTaGCGCCTGGAATCAGAAAGGGCCACTGACGGGACAAGGGCCCTG +
Preference number: 1 (lower is better)
Translates to: LLPQSWRTTEKRSRD*RLESERATDGTRAL
Trigger: CAGGGCCCTTGTCCCGTCAGTGGCCCTTTCTGATTCCAGGCGGCAGTCTCTGCTTCTCTTCTCTGTCGTTCTCCAGGACTGGGGCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CCA 90 bp ACTGCCGCCTGGAATCAGAAAGGGCCACTGACGGGACAAGGGCCCTaGCAGGAAACCCAGGAATCCTGGGAGTCCGTGGGAACAAATGAC +
Preference number: 1 (lower is better)
Translates to: TAAWNQKGPLTGQGP*QETQESWESVGTND
Trigger: GTCATTTGTTCCCACGGACTCCCAGGATTCCTGGGTTTCCTGCCAGGGCCCTTGTCCCGTCAGTGGCCCTTTCTGATTCCAGGCGGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR TCA 90 bp AGAGAAGAGAAGCAGAGACTGCCGCCTGGAATCAGAAAGGGCCACTaGCGGGACAAGGGCCCTGGCAGGAAACCCAGGAATCCTGGGAGT +
Preference number: 1 (lower is better)
Translates to: REEKQRLPPGIRKGH*RDKGPGRKPRNPGS
Trigger: ACTCCCAGGATTCCTGGGTTTCCTGCCAGGGCCCTTGTCCCGTCAGTGGCCCTTTCTGATTCCAGGCGGCAGTCTCTGCTTCTCTTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CCA 90 bp AAATGGGATGGAGACAGAGGTTCTTCTGAGCACTCTGCCAGCCTCTaGGCCAGGGAGATAGCCCCTGAGGGTGGCTCAGATCCACCCAGT +
Preference number: 1 (lower is better)
Translates to: KWDGDRGSSEHSASL*AREIAPEGGSDPPS
Trigger: ACTGGGTGGATCTGAGCCACCCTCAGGGGCTATCTCCCTGGCCCAGAGGCTGGCAGAGTGCTCAGAAGAACCTCTGTCTCCATCCCATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR GCA 90 bp GCACATCTTTGGCCTTCAAGAAGCAGCAAGTTGCCCCTGCACTGTTaGCATGGCAACCACAGCGCAGAGCCTCCTGAGGGCATGGAGAGA +
Preference number: 1 (lower is better)
Translates to: AHLWPSRSSKLPLHC*HGNHSAEPPEGMER
Trigger: TCTCTCCATGCCCTCAGGAGGCTCTGCGCTGTGGTTGCCATGGCAACAGTGCAGGGGCAACTTGCTGCTTCTTGAAGGCCAAAGATGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CCA 90 bp CCATCTCTGTCTGGCCAGAACCAGAGGAGCTGGCCACACTGTTCGTaGCCGTCCTACCTTGTACCTGCCCTACACACACACACACACACA +
Preference number: 1 (lower is better)
Translates to: PSLSGQNQRSWPHCS*PSYLVPALHTHTHT
Trigger: TGTGTGTGTGTGTGTGTGTAGGGCAGGTACAAGGTAGGACGGCCACGAACAGTGTGGCCAGCTCCTCTGGTTCTGGCCAGACAGAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CCA 90 bp GCTTGTGATTCGGAACCTCAGGGAGAAGCAGACAGCCCCTGGAGCTaGAGCAGACATTCGAGTGTCTCAAGGTCCATGACCCATGTGCTG +
Preference number: 1 (lower is better)
Translates to: ACDSEPQGEADSPWS*SRHSSVSRSMTHVL
Trigger: CAGCACATGGGTCATGGACCTTGAGACACTCGAATGTCTGCTCCAGCTCCAGGGGCTGTCTGCTTCTCCCTGAGGTTCCGAATCACAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CCA 90 bp ACTGAAGAGACCCGCGGGTGCAGATCCAGTGAGTGCACTGTTAGCTaGGAGAGGCTGGTGAAGCTTGTGATTCGGAACCTCAGGGAGAAG +
Preference number: 1 (lower is better)
Translates to: TEETRGCRSSECTVS*ERLVKLVIRNLREK
Trigger: CTTCTCCCTGAGGTTCCGAATCACAAGCTTCACCAGCCTCTCCCAGCTAACAGTGCACTCACTGGATCTGCACCCGCGGGTCTCTTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CCA 90 bp CGGGACAAGGGCCCTGGCAGGAAACCCAGGAATCCTGGGAGTCCGTaGGAACAAATGACAGCAAGGTCAAAAGCAAAGTCAGCTCTGACT +
Preference number: 1 (lower is better)
Translates to: RDKGPGRKPRNPGSP*EQMTARSKAKSALT
Trigger: AGTCAGAGCTGACTTTGCTTTTGACCTTGCTGTCATTTGTTCCCACGGACTCCCAGGATTCCTGGGTTTCCTGCCAGGGCCCTTGTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR TCA 90 bp TTACGTGGCCACGGGGAGTTTGTCCTTAAGATTCTGTCCTCTCAGTaGGCCTCACTTGGTGGGTGTGGGTTGGTGCCTGACTCTTGTGCT +
Preference number: 1 (lower is better)
Translates to: LRGHGEFVLKILSSQ*ASLGGCGLVPDSCA
Trigger: AGCACAAGAGTCAGGCACCAACCCACACCCACCAAGTGAGGCTCACTGAGAGGACAGAATCTTAAGGACAAACTCCCCGTGGCCACGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR TCA 90 bp AATGGCCTAGTCAGTCATCAATGGGAGGAGAGGCTCTTGATCCTGTaGAGGCTCGATGCCCAGTGTAGGGGAATGCCAAGGCCAGGAAGT +
Preference number: 1 (lower is better)
Translates to: NGLVSHQWEERLLIL*RLDAQCRGMPRPGS
Trigger: ACTTCCTGGCCTTGGCATTCCCCTACACTGGGCATCGAGCCTTCACAGGATCAAGAGCCTCTCCTCCCATTGATGACTGACTAGGCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CCA 90 bp CTATGTATTACAGTTCCATCTCTGTCTGGCCAGAACCAGAGGAGCTaGCCACACTGTTCGTGGCCGTCCTACCTTGTACCTGCCCTACAC +
Preference number: 1 (lower is better)
Translates to: LCITVPSLSGQNQRS*PHCSWPSYLVPALH
Trigger: GTGTAGGGCAGGTACAAGGTAGGACGGCCACGAACAGTGTGGCCAGCTCCTCTGGTTCTGGCCAGACAGAGATGGAACTGTAATACATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR TCA 90 bp TCTTGCGCAGGTCTTCTACAGGCAACCACAGCAGCTGTGAGTTCATaGGTGCAGTGGGCCTGCCATGTTCAGAAGATGCTGTTTTGGTCC +
Preference number: 1 (lower is better)
Translates to: SCAGLLQATTAAVSS*VQWACHVQKMLFWS
Trigger: GGACCAAAACAGCATCTTCTGAACATGGCAGGCCCACTGCACTCATGAACTCACAGCTGCTGTGGTTGCCTGTAGAAGACCTGCGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CCA 90 bp CCAGTAGAGACTGCTTGCTCTATGTATTACAGTTCCATCTCTGTCTaGCCAGAACCAGAGGAGCTGGCCACACTGTTCGTGGCCGTCCTA +
Preference number: 1 (lower is better)
Translates to: PVETACSMYYSSISV*PEPEELATLFVAVL
Trigger: TAGGACGGCCACGAACAGTGTGGCCAGCTCCTCTGGTTCTGGCCAGACAGAGATGGAACTGTAATACATAGAGCAAGCAGTCTCTACTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CCA 90 bp GTACCAAAGGCCTGTGGAGTACTGGGCACTGCGCTGAGTTCTTCATaGCCATTGCATGAGACTCTTAAGCTCCATGTGAGGAAGACCCTG +
Preference number: 1 (lower is better)
Translates to: VPKACGVLGTALSSS*PLHETLKLHVRKTL
Trigger: CAGGGTCTTCCTCACATGGAGCTTAAGAGTCTCATGCAATGGCCATGAAGAACTCAGCGCAGTGCCCAGTACTCCACAGGCCTTTGGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR TCA 90 bp AGCAGGAACGAAACACCTGGGATACTGGTTTGGTGTAGGACTTCCTaGCTTGACAGTTTAGGGTTGTGGGTGGCAGCAGACACAAAGCAT +
Preference number: 1 (lower is better)
Translates to: SRNETPGILVWCRTS*LDSLGLWVAADTKH
Trigger: ATGCTTTGTGTCTGCTGCCACCCACAACCCTAAACTGTCAAGTCAGGAAGTCCTACACCAAACCAGTATCCCAGGTGTTTCGTTCCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR GCA 90 bp GAACAGATTTCAAGATACAGAAAAAGCAGTCTTCCTGGCTGCGGGTaGTTCCTTCCATTAGGGGAGGCAAGTCACCAACAAGGGCAAGTC +
Preference number: 1 (lower is better)
Translates to: EQISRYRKSSLPGCG*FLPLGEASHQQGQV
Trigger: GACTTGCCCTTGTTGGTGACTTGCCTCCCCTAATGGAAGGAAGCACCCGCAGCCAGGAAGACTGCTTTTTCTGTATCTTGAAATCTGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR GCA 90 bp GTGAGAAAAGTGAGTGTGTCATCAGAGACATCACAAGCCACCCTATaGATCCAAGCAAAGAGCTGCCAACCATCCAAGAACTCACCCCAC +
Preference number: 1 (lower is better)
Translates to: VRKVSVSSETSQATL*IQAKSCQPSKNSPH
Trigger: GTGGGGTGAGTTCTTGGATGGTTGGCAGCTCTTTGCTTGGATGCATAGGGTGGCTTGTGATGTCTCTGATGACACACTCACTTTTCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR GCA 90 bp CACACACGTACACACACAGTGAGTACCACTTCTGAGTGGCTCTCGTaGTTCTTCCGCATGCCCCAATCCACAAATATAACCACCACCATT +
Preference number: 1 (lower is better)
Translates to: HTRTHTVSTTSEWLS*FFRMPQSTNITTTI
Trigger: AATGGTGGTGGTTATATTTGTGGATTGGGGCATGCGGAAGAAGCACGAGAGCCACTCAGAAGTGGTACTCACTGTGTGTGTACGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR TCA 90 bp TTTACAGTGGGACTAAGAAAGGAACAACCAAGACCTCTCTGTCCCTaGGACCTCCCTGTCCCTACTTCTCCTAGACCTCTAAAGAACCAT +
Preference number: 1 (lower is better)
Translates to: FTVGLRKEQPRPLCP*DLPVPTSPRPLKNH
Trigger: ATGGTTCTTTAGAGGTCTAGGAGAAGTAGGGACAGGGAGGTCTCAGGGACAGAGAGGTCTTGGTTGTTCCTTTCTTAGTCCCACTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR TCA 90 bp AAGCTCCATGTGAGGAAGACCCTGAAACTTTCAGTCTATGGTAGATaGAAGATCAACAGGGGTGCAAATGGGATGGAGACAGAGGTTCTT +
Preference number: 1 (lower is better)
Translates to: KLHVRKTLKLSVYGR*KINRGANGMETEVL
Trigger: AAGAACCTCTGTCTCCATCCCATTTGCACCCCTGTTGATCTTTCATCTACCATAGACTGAAAGTTTCAGGGTCTTCCTCACATGGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR TCA 90 bp CCTCCACACACACGCCTGTCAATCTACCCTGTCAATGATCAGATGTaGTTTTCCAAAGAGGTATTTGGAGAAACCCTCAGAAAGTGGTTT +
Preference number: 1 (lower is better)
Translates to: PPHTRLSIYPVNDQM*FSKEVFGETLRKWF
Trigger: AAACCACTTTCTGAGGGTTTCTCCAAATACCTCTTTGGAAAATCACATCTGATCATTGACAGGGTAGATTGACAGGCGTGTGTGTGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR GCA 90 bp TGGAGCACGGGTGACCCCTGGTTCTCGCTCCCTAGAAGCCACCAGCAGCTCCTCTCAGGCACAGTCAGGTaGCTGATGACCGTGGGGCTC +
Preference number: 2 (lower is better)
Translates to: WSTGDPWFSLPRSHQQLLSGTVR*LMTVGL
Trigger: GAGCCCCACGGTCATCAGGCACCTGACTGTGCCTGA...GAGGAGCTGCTGGTGGCTTCTAGGGAGCGAGAACCAGGGGTCACCCGTGCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR TCA 90 bp TGGAGCACGGGTGACCCCTGGTTCTCGCTCCCTAGAAGCCACCAGCAGCTCCTCATTCTGTCCTCTCAGTaGGCCTCACTTGGTGGGTGT +
Preference number: 2 (lower is better)
Translates to: WSTGDPWFSLPRSHQQLLILSSQ*ASLGGC
Trigger: ACACCCACCAAGTGAGGCTCACTGAGAGGACAGAAT...GAGGAGCTGCTGGTGGCTTCTAGGGAGCGAGAACCAGGGGTCACCCGTGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR CCA 90 bp ATCTCTGTCTGGCCAGAACCAGAGGAGCTGGCCACACTGTTCGTGGCCGTCCTAAAGGGCAAGTCAGAGTaGGCCTTGCCAGGTGTTGCT +
Preference number: 2 (lower is better)
Translates to: ISVWPEPEELATLFVAVLKGKSE*ALPGVA
Trigger: AGCAACACCTGGCAAGGCCCACTCTGACTTGCCCTT...TAGGACGGCCACGAACAGTGTGGCCAGCTCCTCTGGTTCTGGCCAGACAGAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR CCA 90 bp ATCTCTGTCTGGCCAGAACCAGAGGAGCTGGCCACACTGTTCGTGGCCGTCCTATTCTCCTCGCTTACGTaGCCACGGGGAGTTTGTCCT +
Preference number: 2 (lower is better)
Translates to: ISVWPEPEELATLFVAVLFSSLT*PRGVCP
Trigger: AGGACAAACTCCCCGTGGCCACGTAAGCGAGGAGAA...TAGGACGGCCACGAACAGTGTGGCCAGCTCCTCTGGTTCTGGCCAGACAGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR CCA 90 bp TGGAGCACGGGTGACCCCTGGTTCTCGCTCCCTAGAAGCCACCAGCAGCTCCTCATAGCTAAAAAGTCATaGACTGGCCCCAGGTCTCAG +
Preference number: 2 (lower is better)
Translates to: WSTGDPWFSLPRSHQQLLIAKKS*TGPRSQ
Trigger: CTGAGACCTGGGGCCAGTCCATGACTTTTTAGCTAT...GAGGAGCTGCTGGTGGCTTCTAGGGAGCGAGAACCAGGGGTCACCCGTGCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR CCA 90 bp TGGAGCACGGGTGACCCCTGGTTCTCGCTCCCTAGAAGCCACCAGCAGCTCCTCCTAAAGAGGGGAGAATaGAGAGAGAGCATGTCACAG +
Preference number: 2 (lower is better)
Translates to: WSTGDPWFSLPRSHQQLLLKRGE*RESMSQ
Trigger: CTGTGACATGCTCTCTCTCCATTCTCCCCTCTTTAG...GAGGAGCTGCTGGTGGCTTCTAGGGAGCGAGAACCAGGGGTCACCCGTGCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR GCA 90 bp GGAGTACTGGGCACTGCGCTGAGTTCTTCATGGCCATTGCATGAGACTCTTAAGCCGTGGAGCCAGGGCTaGAGGGTCATTCGGAAGCAC +
Preference number: 2 (lower is better)
Translates to: GVLGTALSSSWPLHETLKPWSQG*RVIRKH
Trigger: GTGCTTCCGAATGACCCTGCAGCCCTGGCTCCACGG...CTTAAGAGTCTCATGCAATGGCCATGAAGAACTCAGCGCAGTGCCCAGTACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR CCA 90 bp GTACCAAAGGCCTGTGGAGTACTGGGCACTGCGCTGAGTTCTTCATGGCCATTGACCAGAAGCAAGGAATaGACCCCTGCAGGGCTCAGG +
Preference number: 2 (lower is better)
Translates to: VPKACGVLGTALSSSWPLTRSKE*TPAGLR
Trigger: CCTGAGCCCTGCAGGGGTCCATTCCTTGCTTCTGGT...CAATGGCCATGAAGAACTCAGCGCAGTGCCCAGTACTCCACAGGCCTTTGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CAA 90 bp GGCAAGTCACCAACAAGGGCAAGTCAGAGTGGGCCTTGCCAGGTGTaGCTGCATAGGAACCCAAGTGCTGATTCAAGCAACCACGTGACC +
Preference number: 2 (lower is better)
Translates to: GKSPTRASQSGPCQV*LHRNPSADSSNHVT
Trigger: GGTCACGTGGTTGCTTGAATCAGCACTTGGGTTCCTATGCAGCAACACCTGGCAAGGCCCACTCTGACTTGCCCTTGTTGGTGACTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR TCA 90 bp TGGAGCACGGGTGACCCCTGGTTCTCGCTCCCTAGAAGCCACCAGCAGCTCCTCTTGGTCTCAAATATTTaGCCCCCATATCCCAACTCT +
Preference number: 2 (lower is better)
Translates to: WSTGDPWFSLPRSHQQLLLVSNI*PPYPNS
Trigger: AGAGTTGGGATATGGGGGTCAAATATTTGAGACCAA...GAGGAGCTGCTGGTGGCTTCTAGGGAGCGAGAACCAGGGGTCACCCGTGCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR CCA 90 bp CCTGTCCCTACTTCTCCTAGACCTCTAAAGAACCATGGCACTTGTCACATGTCCGCTTTGAAGGGCTGCTaGCTGAAGGTGACCGTGGGC +
Preference number: 2 (lower is better)
Translates to: PVPTSPRPLKNHGTCHMSALKGC*LKVTVG
Trigger: GCCCACGGTCACCTTCAGCCAGCAGCCCTTCAAAGC...GGACATGTGACAAGTGCCATGGTTCTTTAGAGGTCTAGGAGAAGTAGGGACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR CCA 90 bp CCTGTCCCTACTTCTCCTAGACCTCTAAAGAACCATGGCACTTGTCACATGTCCATCCATGGTTCACCGTaGAGCCAGGGCTGCAGGGTC +
Preference number: 2 (lower is better)
Translates to: PVPTSPRPLKNHGTCHMSIHGSP*SQGCRV
Trigger: GACCCTGCAGCCCTGGCTCCACGGTGAACCATGGAT...GGACATGTGACAAGTGCCATGGTTCTTTAGAGGTCTAGGAGAAGTAGGGACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR CCA 90 bp CCTGTCCCTACTTCTCCTAGACCTCTAAAGAACCATGGCACTTGTCACATGTCCATGGGGATAGGGGTCTaGGGTGGAAGCCAGCCTGTG +
Preference number: 2 (lower is better)
Translates to: PVPTSPRPLKNHGTCHMSMGIGV*GGSQPV
Trigger: CACAGGCTGGCTTCCACCCCAGACCCCTATCCCCAT...GGACATGTGACAAGTGCCATGGTTCTTTAGAGGTCTAGGAGAAGTAGGGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR GCA 90 bp GTACCAAAGGCCTGTGGAGTACTGGGCACTGCGCTGAGTTCTTCATGGCCATTGCCGAAAGCAGTCATGTaGTTCCTTCCATGCAGCCTT +
Preference number: 2 (lower is better)
Translates to: VPKACGVLGTALSSSWPLPKAVM*FLPCSL
Trigger: AAGGCTGCATGGAAGGAAGCACATGACTGCTTTCGG...CAATGGCCATGAAGAACTCAGCGCAGTGCCCAGTACTCCACAGGCCTTTGGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR GCA 90 bp CCTGTCCCTACTTCTCCTAGACCTCTAAAGAACCATGGCACTTGTCACATGTCCCCCAGTGTAGGGGAATaGCAAGGCCAGGAAGTGGGA +
Preference number: 2 (lower is better)
Translates to: PVPTSPRPLKNHGTCHMSPSVGE*QGQEVG
Trigger: TCCCACTTCCTGGCCTTGGCATTCCCCTACACTGGG...GGACATGTGACAAGTGCCATGGTTCTTTAGAGGTCTAGGAGAAGTAGGGACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR CCA 90 bp TTCATACGTATGATTAGAGGGTCTCCTGAGGAGAGTGGGAAGCCCAGAATTAGGCCTGCACTGTTGCCATaGCAACCACAGCGCAGAGCC +
Preference number: 2 (lower is better)
Translates to: FIRMIRGSPEESGKPRIRPALLP*QPQRRA
Trigger: GGCTCTGCGCTGTGGTTGCCATGGCAACAGTGCAGG...CCTAATTCTGGGCTTCCCACTCTCCTCAGGAGACCCTCTAATCATACGTATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR CCA 90 bp CAGGGGGAAAGACAGCTTGGTCTCAAATATTTGACCCCCATATCCCAACTCTGTGCCAAGGCCAGGAAGTaGGAGTGGGTGGGTTGGGAA +
Preference number: 2 (lower is better)
Translates to: QGERQLGLKYLTPISQLCAKARK*EWVGWE
Trigger: TTCCCAACCCACCCACTCCCACTTCCTGGCCTTGGC...ACAGAGTTGGGATATGGGGGTCAAATATTTGAGACCAAGCTGTCTTTCCCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CAA 90 bp ACGGGGAGTTTGTCCTTAAGATTCTGTCCTCTCAGTGAGCCTCACTaGGTGGGTGTGGGTTGGTGCCTGACTCTTGTGCTGAAGAAGACA +
Preference number: 2 (lower is better)
Translates to: TGSLSLRFCPLSEPH*VGVGWCLTLVLKKT
Trigger: TGTCTTCTTCAGCACAAGAGTCAGGCACCAACCCACACCCACCAAGTGAGGCTCACTGAGAGGACAGAATCTTAAGGACAAACTCCCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR CCA 90 bp TTGTACCTGCCCTACACACACACACACACACACACACACACACACACACACACAAGAGGAGAAGGGAGGTaGAGAAGGCACGTGGTGACT +
Preference number: 2 (lower is better)
Translates to: LYLPYTHTHTHTHTHTHTRGEGR*RRHVVT
Trigger: AGTCACCACGTGCCTTCTCCACCTCCCTTCTCCTCT...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGCAGGTACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR CCA 90 bp TTCATACGTATGATTAGAGGGTCTCCTGAGGAGAGTGGGAAGCCCAGAATTAGGGTGGAAGCCAGCCTGTaGCCATTACGGACCTTCTCG +
Preference number: 2 (lower is better)
Translates to: FIRMIRGSPEESGKPRIRVEASL*PLRTFS
Trigger: CGAGAAGGTCCGTAATGGCCACAGGCTGGCTTCCAC...CCTAATTCTGGGCTTCCCACTCTCCTCAGGAGACCCTCTAATCATACGTATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR CCA 90 bp GGAGTACTGGGCACTGCGCTGAGTTCTTCATGGCCATTGCATGAGACTCTTAAGGTAGAAGCTGAGAGCTaGGAACAAGGGACTCCTCAG +
Preference number: 2 (lower is better)
Translates to: GVLGTALSSSWPLHETLKVEAES*EQGTPQ
Trigger: CTGAGGAGTCCCTTGTTCCCAGCTCTCAGCTTCTAC...CTTAAGAGTCTCATGCAATGGCCATGAAGAACTCAGCGCAGTGCCCAGTACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR CCA 90 bp TTCATACGTATGATTAGAGGGTCTCCTGAGGAGAGTGGGAAGCCCAGAATTAGGGCAGAGACTGCCGCCTaGAATCAGAAAGGGCCACTG +
Preference number: 2 (lower is better)
Translates to: FIRMIRGSPEESGKPRIRAETAA*NQKGPL
Trigger: CAGTGGCCCTTTCTGATTCCAGGCGGCAGTCTCTGC...CCTAATTCTGGGCTTCCCACTCTCCTCAGGAGACCCTCTAATCATACGTATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CAA 90 bp AAGGCCTGTGGAGTACTGGGCACTGCGCTGAGTTCTTCATGGCCATaGCATGAGACTCTTAAGCTCCATGTGAGGAAGACCCTGAAACTT +
Preference number: 2 (lower is better)
Translates to: KACGVLGTALSSSWP*HETLKLHVRKTLKL
Trigger: AAGTTTCAGGGTCTTCCTCACATGGAGCTTAAGAGTCTCATGCAATGGCCATGAAGAACTCAGCGCAGTGCCCAGTACTCCACAGGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR TCA 90 bp GTACCAAAGGCCTGTGGAGTACTGGGCACTGCGCTGAGTTCTTCATGGCCATTGTCAGTCTATGGTAGATaGAAGATCAACAGGGGTGCA +
Preference number: 2 (lower is better)
Translates to: VPKACGVLGTALSSSWPLSVYGR*KINRGA
Trigger: TGCACCCCTGTTGATCTTTCATCTACCATAGACTGA...CAATGGCCATGAAGAACTCAGCGCAGTGCCCAGTACTCCACAGGCCTTTGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR TCA 90 bp TGGGAACAAATGACAGCAAGGTCAAAAGCAAAGTCAGCTCTGACTCAGAACCCACCCATTCCGGGCAGATaGCTAGAAAGTAGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: WEQMTARSKAKSALTQNPPIPGR*LESRLG
Trigger: GCCCAGCCTACTTTCTAGTCATCTGCCCGGAATGGG...TGGGTTCTGAGTCAGAGCTGACTTTGCTTTTGACCTTGCTGTCATTTGTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR GCA 90 bp TGGGAACAAATGACAGCAAGGTCAAAAGCAAAGTCAGCTCTGACTCAGAACCCATGGGCTTTGAAGGGCTaGTGGCTGAAGGTGACCGTG +
Preference number: 2 (lower is better)
Translates to: WEQMTARSKAKSALTQNPWALKG*WLKVTV
Trigger: CACGGTCACCTTCAGCCAGCAGCCCTTCAAAGCCCA...TGGGTTCTGAGTCAGAGCTGACTTTGCTTTTGACCTTGCTGTCATTTGTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR CCA 90 bp CTGCTTGCTCTATGTATTACAGTTCCATCTCTGTCTGGCCAGAACCAGAGGAGCCAGCTCTCTGGTTTCTaGAGAACAGGGGCCAAAGCA +
Preference number: 2 (lower is better)
Translates to: LLALCITVPSLSGQNQRSQLSGF*RTGAKA
Trigger: TGCTTTGGCCCCTGTTCTCCAGAAACCAGAGAGCTG...GCTCCTCTGGTTCTGGCCAGACAGAGATGGAACTGTAATACATAGAGCAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR CCA 90 bp TGGGAACAAATGACAGCAAGGTCAAAAGCAAAGTCAGCTCTGACTCAGAACCCAGACAGCCCCTGGAGCTaGAGCAGACATTCGAGTGTC +
Preference number: 2 (lower is better)
Translates to: WEQMTARSKAKSALTQNPDSPWS*SRHSSV
Trigger: GACACTCGAATGTCTGCTCCAGCTCCAGGGGCTGTC...TGGGTTCTGAGTCAGAGCTGACTTTGCTTTTGACCTTGCTGTCATTTGTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR CCA 90 bp CTGCTTGCTCTATGTATTACAGTTCCATCTCTGTCTGGCCAGAACCAGAGGAGCGAGTGCACTGTTAGCTaGGAGAGGCTGGTGAAGCTT +
Preference number: 2 (lower is better)
Translates to: LLALCITVPSLSGQNQRSECTVS*ERLVKL
Trigger: AAGCTTCACCAGCCTCTCCCAGCTAACAGTGCACTC...GCTCCTCTGGTTCTGGCCAGACAGAGATGGAACTGTAATACATAGAGCAAGCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR CCA 90 bp GGAGTACTGGGCACTGCGCTGAGTTCTTCATGGCCATTGCATGAGACTCTTAAGCAACAGGGGTGCAAATaGGATGGAGACAGAGGTTCT +
Preference number: 2 (lower is better)
Translates to: GVLGTALSSSWPLHETLKQQGCK*DGDRGS
Trigger: AGAACCTCTGTCTCCATCCCATTTGCACCCCTGTTG...CTTAAGAGTCTCATGCAATGGCCATGAAGAACTCAGCGCAGTGCCCAGTACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR TCA 90 bp CAGGGGGAAAGACAGCTTGGTCTCAAATATTTGACCCCCATATCCCAACTCTGTGGAGAAGGCACGTGGTaGCTTTTCTGGAAAAGCCCA +
Preference number: 2 (lower is better)
Translates to: QGERQLGLKYLTPISQLCGEGTW*LFWKSP
Trigger: TGGGCTTTTCCAGAAAAGTCACCACGTGCCTTCTCC...ACAGAGTTGGGATATGGGGGTCAAATATTTGAGACCAAGCTGTCTTTCCCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR GCA 90 bp CAGGGGGAAAGACAGCTTGGTCTCAAATATTTGACCCCCATATCCCAACTCTGTCTTGCCAGGTGTTGCTaGATAGGAACCCAAGTGCTG +
Preference number: 2 (lower is better)
Translates to: QGERQLGLKYLTPISQLCLARCC*IGTQVL
Trigger: CAGCACTTGGGTTCCTATGCAGCAACACCTGGCAAG...ACAGAGTTGGGATATGGGGGTCAAATATTTGAGACCAAGCTGTCTTTCCCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR GCA 90 bp TTGTACCTGCCCTACACACACACACACACACACACACACACACACACACACACAGTTCTGTTAAGCATTTaGCACCGGCTCTTTGCTCCC +
Preference number: 2 (lower is better)
Translates to: LYLPYTHTHTHTHTHTHTVLLSI*HRLFAP
Trigger: GGGAGCAAAGAGCCGGTGGCAAATGCTTAACAGAAC...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGCAGGTACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR CCA 90 bp GTGCCAACTATATGGTGTGTACAAGAGACTCACGTTAGAGATACAGAGATTGAAGATAGGGGTCTGGGGTaGAAGCCAGCCTGTGGCCAT +
Preference number: 2 (lower is better)
Translates to: VPTIWCVQETHVRDTEIEDRGLG*KPACGH
Trigger: ATGGCCACAGGCTGGCTTCCACCCCAGACCCCTATC...TTCAATCTCTGTATCTCTAACGTGAGTCTCTTGTACACACCATATAGTTGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR CCA 90 bp ATGAAATACCCCAGGGAGACTGAAGAAGCAAACCCTAAGCAGGAACGAAACACCCCAGCATCACCCAAATaGCACATCTTTGGCCTTCAA +
Preference number: 2 (lower is better)
Translates to: MKYPRETEEANPKQERNTPASPK*HIFGLQ
Trigger: TTGAAGGCCAAAGATGTGCCATTTGGGTGATGCTGG...GGTGTTTCGTTCCTGCTTAGGGTTTGCTTCTTCAGTCTCCCTGGGGTATTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR TCA 90 bp TGGGAACAAATGACAGCAAGGTCAAAAGCAAAGTCAGCTCTGACTCAGAACCCAAATGACAATCACTTGTaGAAAGCACCCTGTGTCATC +
Preference number: 2 (lower is better)
Translates to: WEQMTARSKAKSALTQNPNDNHL*KAPCVI
Trigger: GATGACACAGGGTGCTTTTCACAAGTGATTGTCATT...TGGGTTCTGAGTCAGAGCTGACTTTGCTTTTGACCTTGCTGTCATTTGTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR CCA 90 bp GTGCCAACTATATGGTGTGTACAAGAGACTCACGTTAGAGATACAGAGATTGAATTCCAAAGAGGTATTTaGAGAAACCCTCAGAAAGTG +
Preference number: 2 (lower is better)
Translates to: VPTIWCVQETHVRDTEIEFQRGI*RNPQKV
Trigger: CACTTTCTGAGGGTTTCTCCAAATACCTCTTTGGAA...TTCAATCTCTGTATCTCTAACGTGAGTCTCTTGTACACACCATATAGTTGGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CAA 90 bp CAGCAAATAAAAGAGGGACCACAAAATAGACTTGAAGACAAACGTTaGTTACTGTTACATAGGATGCTACTGTATCCTGAAGATGTCATG +
Preference number: 2 (lower is better)
Translates to: QQIKEGPQNRLEDKR*LLLHRMLLYPEDVM
Trigger: CATGACATCTTCAGGATACAGTAGCATCCTATGTAACAGTAACAAACGTTTGTCTTCAAGTCTATTTTGTGGTCCCTCTTTTATTTGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR CAA 90 bp TGGAGCACGGGTGACCCCTGGTTCTCGCTCCCTAGAAGCCACCAGCAGCTCCTCCTTGGTGGGTGTGGGTaGGTGCCTGACTCTTGTGCT +
Preference number: 3 (lower is better)
Translates to: WSTGDPWFSLPRSHQQLLLGGCG*VPDSCA
Trigger: AGCACAAGAGTCAGGCACCAACCCACACCCACCAAG...GAGGAGCTGCTGGTGGCTTCTAGGGAGCGAGAACCAGGGGTCACCCGTGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR GCA 72 bp GGAGCCGTCATCCATGGTTCACCGTGGAGCCAGGGCTaGAGGGTCATTCGGAAGCACACTGAAGAGACCCGC +
Preference number: 3 (lower is better)
Translates to: GAVIHGSPWSQG*RVIRKHTEETR
Trigger: GCGGGTCTCTTCAGTGTGCTTCCGAATGACCCTGCAGCCCTGGCTCCACGGTGAACCATGGATGACGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CCA 72 bp GAACATAGAGCCATCCACTGGAGCACGGGTGACCCCTaGTTCTCGCTCCCTAGAAGCCACCAGCAGCTCCTC +
Preference number: 3 (lower is better)
Translates to: EHRAIHWSTGDP*FSLPRSHQQLL
Trigger: GAGGAGCTGCTGGTGGCTTCTAGGGAGCGAGAACCAGGGGTCACCCGTGCTCCAGTGGATGGCTCTATGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CCA 72 bp AACTCCAGGTGTGGAGCCGTCATCCATGGTTCACCGTaGAGCCAGGGCTGCAGGGTCATTCGGAAGCACACT +
Preference number: 3 (lower is better)
Translates to: NSRCGAVIHGSP*SQGCRVIRKHT
Trigger: AGTGTGCTTCCGAATGACCCTGCAGCCCTGGCTCCACGGTGAACCATGGATGACGGCTCCACACCTGGAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CCA 72 bp TCTGGCCAGAACCAGAGGAGCTGGCCACACTGTTCGTaGCCGTCCTACCTTGTACCTGCCCTACACACACAC +
Preference number: 3 (lower is better)
Translates to: SGQNQRSWPHCS*PSYLVPALHTH
Trigger: GTGTGTGTGTAGGGCAGGTACAAGGTAGGACGGCCACGAACAGTGTGGCCAGCTCCTCTGGTTCTGGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR TCA 72 bp GGCTCAGGTCATTCCCTGAAGCCTAGCGCCCTCTGCTaGAGTCAGCAGCTAGAGGCAGCTCACTTCTCAAGC +
Preference number: 3 (lower is better)
Translates to: GSGHSLKPSALC*SQQLEAAHFSS
Trigger: GCTTGAGAAGTGAGCTGCCTCTAGCTGCTGACTTCAGCAGAGGGCGCTAGGCTTCAGGGAATGACCTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR TCA 72 bp ACAGGGGTGCAAATGGGATGGAGACAGAGGTTCTTCTaGGCACTCTGCCAGCCTCTGGGCCAGGGAGATAGC +
Preference number: 3 (lower is better)
Translates to: TGVQMGWRQRFF*ALCQPLGQGDS
Trigger: GCTATCTCCCTGGCCCAGAGGCTGGCAGAGTGCTCAGAAGAACCTCTGTCTCCATCCCATTTGCACCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR GCA 72 bp CACATCTTTGGCCTTCAAGAAGCAGCAAGTTGCCCCTaGACTGTTGCCATGGCAACCACAGCGCAGAGCCTC +
Preference number: 3 (lower is better)
Translates to: HIFGLQEAASCP*TVAMATTAQSL
Trigger: GAGGCTCTGCGCTGTGGTTGCCATGGCAACAGTGCAGGGGCAACTTGCTGCTTCTTGAAGGCCAAAGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR GCA 72 bp CTTCCATGCAGCCTTCCAAAGTCAGGCACAGTCAGGTaGCTGATGACCGTGGGGCTCTTGTTCTTTGAGGGG +
Preference number: 3 (lower is better)
Translates to: LPCSLPKSGTVR*LMTVGLLFFEG
Trigger: CCCCTCAAAGAACAAGAGCCCCACGGTCATCAGGCACCTGACTGTGCCTGACTTTGGAAGGCTGCATGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CCA 72 bp GCACCCAGACATTTAGTGCTGACCAGAAGCAAGGAATaGACCCCTGCAGGGCTCAGGTCATTCCCTGAAGCC +
Preference number: 3 (lower is better)
Translates to: APRHLVLTRSKE*TPAGLRSFPEA
Trigger: GGCTTCAGGGAATGACCTGAGCCCTGCAGGGGTCCATTCCTTGCTTCTGGTCAGCACTAAATGTCTGGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CCA 72 bp ACAGTTCCATCTCTGTCTGGCCAGAACCAGAGGAGCTaGCCACACTGTTCGTGGCCGTCCTACCTTGTACCT +
Preference number: 3 (lower is better)
Translates to: TVPSLSGQNQRS*PHCSWPSYLVP
Trigger: AGGTACAAGGTAGGACGGCCACGAACAGTGTGGCCAGCTCCTCTGGTTCTGGCCAGACAGAGATGGAACTGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CCA 72 bp ACGGGACAAGGGCCCTGGCAGGAAACCCAGGAATCCTaGGAGTCCGTGGGAACAAATGACAGCAAGGTCAAA +
Preference number: 3 (lower is better)
Translates to: TGQGPWQETQES*ESVGTNDSKVK
Trigger: TTTGACCTTGCTGTCATTTGTTCCCACGGACTCCCAGGATTCCTGGGTTTCCTGCCAGGGCCCTTGTCCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR CAA 90 bp GAGTGTGTCATCAGAGACATCACAAGCCACCCTATGCATCCAAGCAAAGAGCTGGTTGCCCCTGCACTGTaGCCATGGCAACCACAGCGC +
Preference number: 3 (lower is better)
Translates to: ECVIRDITSHPMHPSKELVAPAL*PWQPQR
Trigger: GCGCTGTGGTTGCCATGGCAACAGTGCAGGGGCAAC...CAGCTCTTTGCTTGGATGCATAGGGTGGCTTGTGATGTCTCTGATGACACACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR TCA 72 bp GTCAGTCATCAATGGGAGGAGAGGCTCTTGATCCTGTaGAGGCTCGATGCCCAGTGTAGGGGAATGCCAAGG +
Preference number: 3 (lower is better)
Translates to: VSHQWEERLLIL*RLDAQCRGMPR
Trigger: CCTTGGCATTCCCCTACACTGGGCATCGAGCCTTCACAGGATCAAGAGCCTCTCCTCCCATTGATGACTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR GCA 72 bp CAAGGGCAAGTCAGAGTGGGCCTTGCCAGGTGTTGCTaGATAGGAACCCAAGTGCTGATTCAAGCAACCACG +
Preference number: 3 (lower is better)
Translates to: QGQVRVGLARCC*IGTQVLIQATT
Trigger: CGTGGTTGCTTGAATCAGCACTTGGGTTCCTATGCAGCAACACCTGGCAAGGCCCACTCTGACTTGCCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR GCA 72 bp ATGGCACTTGTCACATGTCCAAAGGCTTCGTACCAGTaGTCGCCCACTCTCCTCCGAACCCTTCAAGGCACT +
Preference number: 3 (lower is better)
Translates to: MALVTCPKASYQ*SPTLLRTLQGT
Trigger: AGTGCCTTGAAGGGTTCGGAGGAGAGTGGGCGAGCACTGGTACGAAGCCTTTGGACATGTGACAAGTGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CCA 72 bp ACAGGCCACCCCAGCATCACCCAAATGGCACATCTTTaGCCTTCAAGAAGCAGCAAGTTGCCCCTGCACTGT +
Preference number: 3 (lower is better)
Translates to: TGHPSITQMAHL*PSRSSKLPLHC
Trigger: ACAGTGCAGGGGCAACTTGCTGCTTCTTGAAGGCCAAAGATGTGCCATTTGGGTGATGCTGGGGTGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CCA 72 bp CTACCAATAAAACCAGGCCCTGGTACCAAAGGCCTGTaGAGTACTGGGCACTGCGCTGAGTTCTTCATGGCC +
Preference number: 3 (lower is better)
Translates to: LPIKPGPGTKGL*STGHCAEFFMA
Trigger: GGCCATGAAGAACTCAGCGCAGTGCCCAGTACTCCACAGGCCTTTGGTACCAGGGCCTGGTTTTATTGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CCA 72 bp AGCTCCTCAGCTGAGGGCAGGGGTCATGAGCACATCTaGCTCTATGCCAGGACGCTGACCATCTTAATCTTG +
Preference number: 3 (lower is better)
Translates to: SSSAEGRGHEHI*LYARTLTILIL
Trigger: CAAGATTAAGATGGTCAGCGTCCTGGCATAGAGCCAGATGTGCTCATGACCCCTGCCCTCAGCTGAGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR TCA 72 bp TGCATAGGAACCCAAGTGCTGATTCAAGCAACCACGTaGCCTTGGGCTTTGAAGGGCTGCTGGCTGAAGGTG +
Preference number: 3 (lower is better)
Translates to: CIGTQVLIQATT*PWALKGCWLKV
Trigger: CACCTTCAGCCAGCAGCCCTTCAAAGCCCAAGGTCACGTGGTTGCTTGAATCAGCACTTGGGTTCCTATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR TCA 72 bp GAGCCGGTTCCAGTAAGTGTACCCATTCCGGGCAGATaGCTAGAAAGTAGGCTGGGCTGTGACTCCATGCTA +
Preference number: 3 (lower is better)
Translates to: EPVPVSVPIPGR*LESRLGCDSML
Trigger: TAGCATGGAGTCACAGCCCAGCCTACTTTCTAGTCATCTGCCCGGAATGGGTACACTTACTGGAACCGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR GCA 72 bp CAACAAGGGCAAGTCAGAGTGGGCCTTGCCAGGTGTTaGTGCATAGGAACCCAAGTGCTGATTCAAGCAACC +
Preference number: 3 (lower is better)
Translates to: QQGQVRVGLARC*CIGTQVLIQAT
Trigger: GGTTGCTTGAATCAGCACTTGGGTTCCTATGCAGCAACACCTGGCAAGGCCCACTCTGACTTGCCCTTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR GCA 72 bp AAAAGCCTCCCGAAAGCAGTCATGTGCTTCCTTCCATaGAGCCTTCCAAAGTCAGGCACAGTCAGGTGCCTG +
Preference number: 3 (lower is better)
Translates to: KSLPKAVMCFLP*SLPKSGTVRCL
Trigger: CAGGCACCTGACTGTGCCTGACTTTGGAAGGCTGCATGGAAGGAAGCACATGACTGCTTTCGGGAGGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CCA 72 bp GCCAAAGCAAGACAGGCCACCCCAGCATCACCCAAATaGCACATCTTTGGCCTTCAAGAAGCAGCAAGTTGC +
Preference number: 3 (lower is better)
Translates to: AKARQATPASPK*HIFGLQEAASC
Trigger: GCAACTTGCTGCTTCTTGAAGGCCAAAGATGTGCCATTTGGGTGATGCTGGGGTGGCCTGTCTTGCTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CCA 72 bp TGTCCTCTCAGTGAGCCTCACTTGGTGGGTGTGGGTTaGTGCCTGACTCTTGTGCTGAAGAAGACAGTGTCA +
Preference number: 3 (lower is better)
Translates to: CPLSEPHLVGVG*CLTLVLKKTVS
Trigger: TGACACTGTCTTCTTCAGCACAAGAGTCAGGCACCAACCCACACCCACCAAGTGAGGCTCACTGAGAGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CCA 72 bp TGTGGCCATTACGGACCTTCTCGAGGCACCTGGGTATaGGTTCTGTTAAGCATTTGCCACCGGCTCTTTGCT +
Preference number: 3 (lower is better)
Translates to: CGHYGPSRGTWV*VLLSICHRLFA
Trigger: AGCAAAGAGCCGGTGGCAAATGCTTAACAGAACCCATACCCAGGTGCCTCGAGAAGGTCCGTAATGGCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CCA 72 bp GCCTGTGGAGTACTGGGCACTGCGCTGAGTTCTTCATaGCCATTGCATGAGACTCTTAAGCTCCATGTGAGG +
Preference number: 3 (lower is better)
Translates to: ACGVLGTALSSS*PLHETLKLHVR
Trigger: CCTCACATGGAGCTTAAGAGTCTCATGCAATGGCCATGAAGAACTCAGCGCAGTGCCCAGTACTCCACAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CCA 72 bp GGCCCTGGCAGGAAACCCAGGAATCCTGGGAGTCCGTaGGAACAAATGACAGCAAGGTCAAAAGCAAAGTCA +
Preference number: 3 (lower is better)
Translates to: GPGRKPRNPGSP*EQMTARSKAKS
Trigger: TGACTTTGCTTTTGACCTTGCTGTCATTTGTTCCCACGGACTCCCAGGATTCCTGGGTTTCCTGCCAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CCA 72 bp GTGCAGTGGGCCTGCCATGTTCAGAAGATGCTGTTTTaGTCCAGGCCTCCTCAACCTCTGGCTCTTACAATC +
Preference number: 3 (lower is better)
Translates to: VQWACHVQKMLF*SRPPQPLALTI
Trigger: GATTGTAAGAGCCAGAGGTTGAGGAGGCCTGGACCAAAACAGCATCTTCTGAACATGGCAGGCCCACTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR CAA 90 bp GAGTGTGTCATCAGAGACATCACAAGCCACCCTATGCATCCAAGCAAAGAGCTGATGACCGTGGGGCTCTaGTTCTTTGAGGGGTCTGGG +
Preference number: 3 (lower is better)
Translates to: ECVIRDITSHPMHPSKELMTVGL*FFEGSG
Trigger: CCCAGACCCCTCAAAGAACAAGAGCCCCACGGTCAT...CAGCTCTTTGCTTGGATGCATAGGGTGGCTTGTGATGTCTCTGATGACACACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR TCA 72 bp TGGTACCAAAGGCCTGTGGAGTACTGGGCACTGCGCTaGGTTCTTCATGGCCATTGCATGAGACTCTTAAGC +
Preference number: 3 (lower is better)
Translates to: WYQRPVEYWALR*VLHGHCMRLLS
Trigger: GCTTAAGAGTCTCATGCAATGGCCATGAAGAACTCAGCGCAGTGCCCAGTACTCCACAGGCCTTTGGTACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR GCA 72 bp CATCTGGGGGCCCAGAGGATCCCAGTAGAGACTGCTTaGTCTATGTATTACAGTTCCATCTCTGTCTGGCCA +
Preference number: 3 (lower is better)
Translates to: HLGAQRIPVETA*SMYYSSISVWP
Trigger: TGGCCAGACAGAGATGGAACTGTAATACATAGAGCAAGCAGTCTCTACTGGGATCCTCTGGGCCCCCAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR CAA 90 bp TGGGAACAAATGACAGCAAGGTCAAAAGCAAAGTCAGCTCTGACTCAGAACCCAAGCAACCACGTGACCTaGGGCTTTGAAGGGCTGCTG +
Preference number: 3 (lower is better)
Translates to: WEQMTARSKAKSALTQNPSNHVT*GFEGLL
Trigger: CAGCAGCCCTTCAAAGCCCAAGGTCACGTGGTTGCT...TGGGTTCTGAGTCAGAGCTGACTTTGCTTTTGACCTTGCTGTCATTTGTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR GCA 72 bp AAGGCATCTGGGGGCCCAGAGGATCCCAGTAGAGACTaGTTGCTCTATGTATTACAGTTCCATCTCTGTCTG +
Preference number: 3 (lower is better)
Translates to: KASGGPEDPSRD*LLYVLQFHLCL
Trigger: CAGACAGAGATGGAACTGTAATACATAGAGCAAGCAGTCTCTACTGGGATCCTCTGGGCCCCCAGATGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR GCA 72 bp TCAAGATACAGAAAAAGCAGTCTTCCTGGCTGCGGGTaGTTCCTTCCATTAGGGGAGGCAAGTCACCAACAA +
Preference number: 3 (lower is better)
Translates to: SRYRKSSLPGCG*FLPLGEASHQQ
Trigger: TTGTTGGTGACTTGCCTCCCCTAATGGAAGGAAGCACCCGCAGCCAGGAAGACTGCTTTTTCTGTATCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR GCA 72 bp GTGAGTGTGTCATCAGAGACATCACAAGCCACCCTATaGATCCAAGCAAAGAGCTGCCAACCATCCAAGAAC +
Preference number: 3 (lower is better)
Translates to: VSVSSETSQATL*IQAKSCQPSKN
Trigger: GTTCTTGGATGGTTGGCAGCTCTTTGCTTGGATGCATAGGGTGGCTTGTGATGTCTCTGATGACACACTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CCA 72 bp GGAACAGATTTCAAGATACAGAAAAAGCAGTCTTCCTaGCTGCGGGTGCTTCCTTCCATTAGGGGAGGCAAG +
Preference number: 3 (lower is better)
Translates to: GTDFKIQKKQSS*LRVLPSIRGGK
Trigger: CTTGCCTCCCCTAATGGAAGGAAGCACCCGCAGCCAGGAAGACTGCTTTTTCTGTATCTTGAAATCTGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR CAA 90 bp GAGTGTGTCATCAGAGACATCACAAGCCACCCTATGCATCCAAGCAAAGAGCTGGGAAAGAAGTGGGTATaGGGGTGTAGAAGAGAAAGG +
Preference number: 3 (lower is better)
Translates to: ECVIRDITSHPMHPSKELGKKWV*GCRRER
Trigger: CCTTTCTCTTCTACACCCCAATACCCACTTCTTTCC...CAGCTCTTTGCTTGGATGCATAGGGTGGCTTGTGATGTCTCTGATGACACACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR CAA 90 bp TGGGAACAAATGACAGCAAGGTCAAAAGCAAAGTCAGCTCTGACTCAGAACCCATCAAGAAGCAGCAAGTaGCCCCTGCACTGTTGCCAT +
Preference number: 3 (lower is better)
Translates to: WEQMTARSKAKSALTQNPSRSSK*PLHCCH
Trigger: ATGGCAACAGTGCAGGGGCAACTTGCTGCTTCTTGA...TGGGTTCTGAGTCAGAGCTGACTTTGCTTTTGACCTTGCTGTCATTTGTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CCA 72 bp AGAAGATGCTGTTTTGGTCCAGGCCTCCTCAACCTCTaGCTCTTACAATCTTATCATCCTCTCTTCTGTGAC +
Preference number: 3 (lower is better)
Translates to: RRCCFGPGLLNL*LLQSYHPLFCD
Trigger: GTCACAGAAGAGAGGATGATAAGATTGTAAGAGCCAGAGGTTGAGGAGGCCTGGACCAAAACAGCATCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR CAA 90 bp GAGTGTGTCATCAGAGACATCACAAGCCACCCTATGCATCCAAGCAAAGAGCTGTTTCCAAAGAGGTATTaGGAGAAACCCTCAGAAAGT +
Preference number: 3 (lower is better)
Translates to: ECVIRDITSHPMHPSKELFPKRY*EKPSES
Trigger: ACTTTCTGAGGGTTTCTCCAAATACCTCTTTGGAAA...CAGCTCTTTGCTTGGATGCATAGGGTGGCTTGTGATGTCTCTGATGACACACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR TCA 72 bp CCCTCCACACACACGCCTGTCAATCTACCCTGTCAATaGTCAGATGTGATTTTCCAAAGAGGTATTTGGAGA +
Preference number: 3 (lower is better)
Translates to: PSTHTPVNLPCQ*SDVIFQRGIWR
Trigger: TCTCCAAATACCTCTTTGGAAAATCACATCTGATCATTGACAGGGTAGATTGACAGGCGTGTGTGTGGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR TCA 72 bp CTGACTCTTGTGCTGAAGAAGACAGTGTCAGCGGAATaGCAATCACTTGTGAAAAGCACCCTGTGTCATCTT +
Preference number: 3 (lower is better)
Translates to: LTLVLKKTVSAE*QSLVKSTLCHL
Trigger: AAGATGACACAGGGTGCTTTTCACAAGTGATTGTCATTCCGCTGACACTGTCTTCTTCAGCACAAGAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR-3UTR CAA 90 bp ATGAAATACCCCAGGGAGACTGAAGAAGCAAACCCTAAGCAGGAACGAAACACCAGATGGCTTCCCCTTTaGTTTGTCCTTTTCAAAGTT +
Preference number: 3 (lower is better)
Translates to: MKYPRETEEANPKQERNTRWLPL*FVLFKV
Trigger: AACTTTGAAAAGGACAAACAAAAGGGGAAGCCATCT...GGTGTTTCGTTCCTGCTTAGGGTTTGCTTCTTCAGTCTCCCTGGGGTATTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR TCA 72 bp ACACGCCTGTCAATCTACCCTGTCAATGATCAGATGTaGTTTTCCAAAGAGGTATTTGGAGAAACCCTCAGA +
Preference number: 3 (lower is better)
Translates to: TRLSIYPVNDQM*FSKEVFGETLR
Trigger: TCTGAGGGTTTCTCCAAATACCTCTTTGGAAAATCACATCTGATCATTGACAGGGTAGATTGACAGGCGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR GCA 72 bp GACTTGAAGACAAACGTTTGTTACTGTTACATAGGATaGTACTGTATCCTGAAGATGTCATGGTTTGAATAC +
Preference number: 3 (lower is better)
Translates to: DLKTNVCYCYIG*YCILKMSWFEY
Trigger: GTATTCAAACCATGACATCTTCAGGATACAGTAGCATCCTATGTAACAGTAACAAACGTTTGTCTTCAAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR TCA 90 bp TGGAGCACGGGTGACCCCTGGTTCTCGCTCCCTAGAAGCCACCAGCAGCTCCTCCCTCTGACTGGCTCCTaGGAATTCCCCTGCCATCCA +
Preference number: 4 (lower is better)
Translates to: WSTGDPWFSLPRSHQQLLPLTGS*EFPCHP
Trigger: TGGATGGCAGGGGAATTCTCAGGAGCCAGTCAGAGG...GAGGAGCTGCTGGTGGCTTCTAGGGAGCGAGAACCAGGGGTCACCCGTGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CCA 90 bp TGGAGCACGGGTGACCCCTGGTTCTCGCTCCCTAGAAGCCACCAGCAGCTCCTCTCCCGGGCCAGCTCCTaGTTAGTGAGTCTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: WSTGDPWFSLPRSHQQLLSRASS*LVSLSL
Trigger: CAAGCTGAGACTCACTAACCAGGAGCTGGCCCGGGA...GAGGAGCTGCTGGTGGCTTCTAGGGAGCGAGAACCAGGGGTCACCCGTGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR GCA 90 bp GGCCTTCAAGAAGCAGCAAGTTGCCCCTGCACTGTTGCCATGGCAACCACAGCGTGGAGGCTCTCCAGCTaGTGCTGGGCCTCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: GLQEAASCPCTVAMATTAWRLSS*CWASWS
Trigger: ACTCCAGGAGGCCCAGCAGCAGCTGGAGAGCCTCCA...CGCTGTGGTTGCCATGGCAACAGTGCAGGGGCAACTTGCTGCTTCTTGAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR GCA 90 bp TGGAGCACGGGTGACCCCTGGTTCTCGCTCCCTAGAAGCCACCAGCAGCTCCTCCCTCTTCTGGGCATCTaGTCAGTGGCTTCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: WSTGDPWFSLPRSHQQLLPLLGI*SVASQS
Trigger: GCTTTGAGAAGCCACTGAGCAGATGCCCAGAAGAGG...GAGGAGCTGCTGGTGGCTTCTAGGGAGCGAGAACCAGGGGTCACCCGTGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR GCA 90 bp ATCTCTGTCTGGCCAGAACCAGAGGAGCTGGCCACACTGTTCGTGGCCGTCCTAGCAGTATCCCACAGCTaGAGGGCCACCTGTGCGTTG +
Preference number: 4 (lower is better)
Translates to: ISVWPEPEELATLFVAVLAVSHS*RATCAL
Trigger: CAACGCACAGGTGGCCCTGCAGCTGTGGGATACTGC...TAGGACGGCCACGAACAGTGTGGCCAGCTCCTCTGGTTCTGGCCAGACAGAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR GCA 90 bp GTGCTTCCTTCCATTAGGGGAGGCAAGTCACCAACAAGGGCAAGTCAGAGTGGGTTCTCCTTGGCGAGTTaGTCTCCCAGGCCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: VLPSIRGGKSPTRASQSGFSLAS*SPRPRG
Trigger: GCCCCGGGGCCTGGGAGAGCAACTCGCCAAGGAGAA...CCCACTCTGACTTGCCCTTGTTGGTGACTTGCCTCCCCTAATGGAAGGAAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR GCA 90 bp GGCCTTCAAGAAGCAGCAAGTTGCCCCTGCACTGTTGCCATGGCAACCACAGCGTCCATCTCCTTCTCCTaGTGCAGCTCGCAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GLQEAASCPCTVAMATTASISFS*CSSQAS
Trigger: AGAGGCCTGCGAGCTGCAGCAGGAGAAGGAGATGGA...CGCTGTGGTTGCCATGGCAACAGTGCAGGGGCAACTTGCTGCTTCTTGAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR TCA 90 bp ATCTCTGTCTGGCCAGAACCAGAGGAGCTGGCCACACTGTTCGTGGCCGTCCTATGTCCTCTTGCTCCTTaGGTAACCTGGCCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: ISVWPEPEELATLFVAVLCPLAP*VTWPGG
Trigger: TCCACCTGGCCAGGTTACTCAAGGAGCAAGAGGACA...TAGGACGGCCACGAACAGTGTGGCCAGCTCCTCTGGTTCTGGCCAGACAGAGAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR GCA 90 bp GTGCTTCCTTCCATTAGGGGAGGCAAGTCACCAACAAGGGCAAGTCAGAGTGGGTCGTCCTTCCTCAGCTaGAGCCACAGCTGCCTGACG +
Preference number: 4 (lower is better)
Translates to: VLPSIRGGKSPTRASQSGSSFLS*SHSCLT
Trigger: CGTCAGGCAGCTGTGGCTGCAGCTGAGGAAGGACGA...CCCACTCTGACTTGCCCTTGTTGGTGACTTGCCTCCCCTAATGGAAGGAAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CCA 90 bp ATCTCTGTCTGGCCAGAACCAGAGGAGCTGGCCACACTGTTCGTGGCCGTCCTATTCCACATGGCACTCTaGTCTGGCATCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: ISVWPEPEELATLFVAVLFHMAL*SGISTS
Trigger: GGAGGTGGAGATGCCAGACCAGAGTGCCATGTGGAA...TAGGACGGCCACGAACAGTGTGGCCAGCTCCTCTGGTTCTGGCCAGACAGAGAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR GCA 90 bp GGCCTTCAAGAAGCAGCAAGTTGCCCCTGCACTGTTGCCATGGCAACCACAGCGCTCACTGTGTCCTCTTaGTCCTTGAGTAACCTGGCC +
Preference number: 4 (lower is better)
Translates to: GLQEAASCPCTVAMATTALTVSS*SLSNLA
Trigger: GGCCAGGTTACTCAAGGAGCAAGAGGACACAGTGAG...CGCTGTGGTTGCCATGGCAACAGTGCAGGGGCAACTTGCTGCTTCTTGAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CCA 90 bp CTGCTTGCTCTATGTATTACAGTTCCATCTCTGTCTGGCCAGAACCAGAGGAGCAGTGGCCGCCATGCCTaGGGAGAAGCGGGCCTCACA +
Preference number: 4 (lower is better)
Translates to: LLALCITVPSLSGQNQRSSGRHA*GEAGLT
Trigger: TGTGAGGCCCGCTTCTCCCCAGGCATGGCGGCCACT...GCTCCTCTGGTTCTGGCCAGACAGAGATGGAACTGTAATACATAGAGCAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CAA 72 bp AGAGGAGCTGGCCACACTGTTCGTGGCCGTCCTACCTaGTACCTGCCCTACACACACACACACACACACACA +
Preference number: 4 (lower is better)
Translates to: RGAGHTVRGRPT*YLPYTHTHTHT
Trigger: TGTGTGTGTGTGTGTGTGTGTGTAGGGCAGGTACAAGGTAGGACGGCCACGAACAGTGTGGCCAGCTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR TCA 90 bp ATCTCTGTCTGGCCAGAACCAGAGGAGCTGGCCACACTGTTCGTGGCCGTCCTATGGGCTTCTTGGAGCTaGGCAAAAATTGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: ISVWPEPEELATLFVAVLWASWS*AKIVVR
Trigger: CCTCACCACAATTTTTGCTCAGCTCCAAGAAGCCCA...TAGGACGGCCACGAACAGTGTGGCCAGCTCCTCTGGTTCTGGCCAGACAGAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR TCA 90 bp GAGTGTGTCATCAGAGACATCACAAGCCACCCTATGCATCCAAGCAAAGAGCTGCCTCCTTCCAGGAGCTaGGGCAGGGGATCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: ECVIRDITSHPMHPSKELPPSRS*GRGSSS
Trigger: TGAGGAGGATCCCCTGCCTCAGCTCCTGGAAGGAGG...CAGCTCTTTGCTTGGATGCATAGGGTGGCTTGTGATGTCTCTGATGACACACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR TCA 90 bp TTGTACCTGCCCTACACACACACACACACACACACACACACACACACACACACACTTCCTCCACGCTGCTaGGCCACTGGCGGATCGACA +
Preference number: 4 (lower is better)
Translates to: LYLPYTHTHTHTHTHTHTLPPRC*ATGGST
Trigger: TGTCGATCCGCCAGTGGCTCAGCAGCGTGGAGGAAG...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGCAGGTACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR GCA 90 bp GTACCAAAGGCCTGTGGAGTACTGGGCACTGCGCTGAGTTCTTCATGGCCATTGGGGTCAGAAAGCCATTaGCATCAGCATCCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: VPKACGVLGTALSSSWPLGSESH*HQHPGR
Trigger: ACGCCCTGGATGCTGATGGCAATGGCTTTCTGACCC...CAATGGCCATGAAGAACTCAGCGCAGTGCCCAGTACTCCACAGGCCTTTGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR GCA 90 bp TGGAGCACGGGTGACCCCTGGTTCTCGCTCCCTAGAAGCCACCAGCAGCTCCTCCATTGTCAAGTTTATTaGCCAGCAGCAGAACAGGAA +
Preference number: 4 (lower is better)
Translates to: WSTGDPWFSLPRSHQQLLHCQVY*PAAEQE
Trigger: TTCCTGTTCTGCTGCTGGGCAATAAACTTGACAATG...GAGGAGCTGCTGGTGGCTTCTAGGGAGCGAGAACCAGGGGTCACCCGTGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CCA 90 bp GGAGTACTGGGCACTGCGCTGAGTTCTTCATGGCCATTGCATGAGACTCTTAAGTCCAGCTTCTCCGGGTaGTCCAGTTGCTCCACGCAG +
Preference number: 4 (lower is better)
Translates to: GVLGTALSSSWPLHETLKSSFSG*SSCSTQ
Trigger: CTGCGTGGAGCAACTGGACCACCCGGAGAAGCTGGA...CTTAAGAGTCTCATGCAATGGCCATGAAGAACTCAGCGCAGTGCCCAGTACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CCA 90 bp GTGCTTCCTTCCATTAGGGGAGGCAAGTCACCAACAAGGGCAAGTCAGAGTGGGCATGGCACTCTGGTCTaGCATCTCCACCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: VLPSIRGGKSPTRASQSGHGTLV*HLHLQL
Trigger: AAGCTGGAGGTGGAGATGCCAGACCAGAGTGCCATG...CCCACTCTGACTTGCCCTTGTTGGTGACTTGCCTCCCCTAATGGAAGGAAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CCA 90 bp GAGTGTGTCATCAGAGACATCACAAGCCACCCTATGCATCCAAGCAAAGAGCTGGCCTCCTGGAGTTGGTaGGAGGTGCGCTCCAACTCC +
Preference number: 4 (lower is better)
Translates to: ECVIRDITSHPMHPSKELASWSW*EVRSNS
Trigger: GGAGTTGGAGCGCACCTCCCACCAACTCCAGGAGGC...CAGCTCTTTGCTTGGATGCATAGGGTGGCTTGTGATGTCTCTGATGACACACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CCA 90 bp CTGCTTGCTCTATGTATTACAGTTCCATCTCTGTCTGGCCAGAACCAGAGGAGCCTCTCCAGCTGCTGCTaGGCCTCCTGGAGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LLALCITVPSLSGQNQRSLSSCC*ASWSWW
Trigger: CCACCAACTCCAGGAGGCCCAGCAGCAGCTGGAGAG...GCTCCTCTGGTTCTGGCCAGACAGAGATGGAACTGTAATACATAGAGCAAGCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CCA 90 bp CTGCTTGCTCTATGTATTACAGTTCCATCTCTGTCTGGCCAGAACCAGAGGAGCAGTCGATGCCCACAGTaGCCGCCATGCCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: LLALCITVPSLSGQNQRSSRCPQ*PPCLGR
Trigger: TCTCCCCAGGCATGGCGGCCACTGTGGGCATCGACT...GCTCCTCTGGTTCTGGCCAGACAGAGATGGAACTGTAATACATAGAGCAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CAA 72 bp AGGAACCCAAGTGCTGATTCAAGCAACCACGTGACCTaGGGCTTTGAAGGGCTGCTGGCTGAAGGTGACCGT +
Preference number: 4 (lower is better)
Translates to: RNPSADSSNHVT*GFEGLLAEGDR
Trigger: ACGGTCACCTTCAGCCAGCAGCCCTTCAAAGCCCAAGGTCACGTGGTTGCTTGAATCAGCACTTGGGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR TCA 90 bp GTACCAAAGGCCTGTGGAGTACTGGGCACTGCGCTGAGTTCTTCATGGCCATTGGCTCCCTCTCACTTTTaGTCTGCTGCTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: VPKACGVLGTALSSSWPLAPSHF*SAAPSP
Trigger: AGGAGATGGAGCAGCAGATCAAAAGTGAGAGGGAGC...CAATGGCCATGAAGAACTCAGCGCAGTGCCCAGTACTCCACAGGCCTTTGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR TCA 90 bp ATGAAATACCCCAGGGAGACTGAAGAAGCAAACCCTAAGCAGGAACGAAACACCTGCACTCAGACCCACTaGGCTTCTCCTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: MKYPRETEEANPKQERNTCTQTH*ASPPGG
Trigger: GCCCCCAGGAGGAGAAGCTCAGTGGGTCTGAGTGCA...GGTGTTTCGTTCCTGCTTAGGGTTTGCTTCTTCAGTCTCCCTGGGGTATTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR GCA 90 bp TGGAGCACGGGTGACCCCTGGTTCTCGCTCCCTAGAAGCCACCAGCAGCTCCTCCAGCATCTGAAATTGTaGTTCTTCATCATGGTCCAT +
Preference number: 4 (lower is better)
Translates to: WSTGDPWFSLPRSHQQLLQHLKL*FFIMVH
Trigger: ATGGACCATGATGAAGAAGCACAATTTCAGATGCTG...GAGGAGCTGCTGGTGGCTTCTAGGGAGCGAGAACCAGGGGTCACCCGTGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CCA 90 bp GGCCTTCAAGAAGCAGCAAGTTGCCCCTGCACTGTTGCCATGGCAACCACAGCGTCTTCCAGAACTTTCTaGGCTCCAAGTCTGTCCATC +
Preference number: 4 (lower is better)
Translates to: GLQEAASCPCTVAMATTASSRTF*APSLSI
Trigger: GATGGACAGACTTGGAGCCCAGAAAGTTCTGGAAGA...CGCTGTGGTTGCCATGGCAACAGTGCAGGGGCAACTTGCTGCTTCTTGAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CCA 90 bp ATCTCTGTCTGGCCAGAACCAGAGGAGCTGGCCACACTGTTCGTGGCCGTCCTAGCCGCCTTATCTTTCTaGAAAGTTATGTCCCGTTCG +
Preference number: 4 (lower is better)
Translates to: ISVWPEPEELATLFVAVLAALSF*KVMSRS
Trigger: CGAACGGGACATAACTTTCCAGAAAGATAAGGCGGC...TAGGACGGCCACGAACAGTGTGGCCAGCTCCTCTGGTTCTGGCCAGACAGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CCA 90 bp CTGCTTGCTCTATGTATTACAGTTCCATCTCTGTCTGGCCAGAACCAGAGGAGCTGGAACACCAGACCCTaGCTCCCCAGTTCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LLALCITVPSLSGQNQRSWNTRP*LPSSQV
Trigger: GACCTGGGAACTGGGGAGCCAGGGTCTGGTGTTCCA...GCTCCTCTGGTTCTGGCCAGACAGAGATGGAACTGTAATACATAGAGCAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CCA 90 bp GAGTGTGTCATCAGAGACATCACAAGCCACCCTATGCATCCAAGCAAAGAGCTGAGTAACCTGGCCAGGTaGAGCAGGGACTCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: ECVIRDITSHPMHPSKELSNLAR*SRDSWA
Trigger: CGCCCAAGAGTCCCTGCTCCACCTGGCCAGGTTACT...CAGCTCTTTGCTTGGATGCATAGGGTGGCTTGTGATGTCTCTGATGACACACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CAA 72 bp CCAACAAGGGCAAGTCAGAGTGGGCCTTGCCAGGTGTaGCTGCATAGGAACCCAAGTGCTGATTCAAGCAAC +
Preference number: 4 (lower is better)
Translates to: PTRASQSGPCQV*LHRNPSADSSN
Trigger: GTTGCTTGAATCAGCACTTGGGTTCCTATGCAGCAACACCTGGCAAGGCCCACTCTGACTTGCCCTTGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CAA 72 bp GCATCTGGGGGCCCAGAGGATCCCAGTAGAGACTGCTaGCTCTATGTATTACAGTTCCATCTCTGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: ASGGPEDPSRDC*LYVLQFHLCLA
Trigger: GGCCAGACAGAGATGGAACTGTAATACATAGAGCAAGCAGTCTCTACTGGGATCCTCTGGGCCCCCAGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR TCA 90 bp GAGTGTGTCATCAGAGACATCACAAGCCACCCTATGCATCCAAGCAAAGAGCTGGACTCTTGGGCGTTGTaGCCCGAACAGGCACTGCAT +
Preference number: 4 (lower is better)
Translates to: ECVIRDITSHPMHPSKELDSWAL*PEQALH
Trigger: ATGCAGTGCCTGTTCGGGTCACAACGCCCAAGAGTC...CAGCTCTTTGCTTGGATGCATAGGGTGGCTTGTGATGTCTCTGATGACACACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR GCA 90 bp CTGCTTGCTCTATGTATTACAGTTCCATCTCTGTCTGGCCAGAACCAGAGGAGCTGGAGCTGGGCCACCTaGTGGTCAGCTTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LLALCITVPSLSGQNQRSWSWAT*WSASSS
Trigger: AGAGGAAGAAGCTGACCAGCAGGTGGCCCAGCTCCA...GCTCCTCTGGTTCTGGCCAGACAGAGATGGAACTGTAATACATAGAGCAAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR GCA 90 bp GAGTGTGTCATCAGAGACATCACAAGCCACCCTATGCATCCAAGCAAAGAGCTGATCTCCTTCTCCTGCTaGAGCTCGCAGGCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: ECVIRDITSHPMHPSKELISFSC*SSQASL
Trigger: GAGAGAGGCCTGCGAGCTGCAGCAGGAGAAGGAGAT...CAGCTCTTTGCTTGGATGCATAGGGTGGCTTGTGATGTCTCTGATGACACACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CCA 90 bp TGGGAACAAATGACAGCAAGGTCAAAAGCAAAGTCAGCTCTGACTCAGAACCCATGGGCCTCCTGGAGTTaGTGGGAGGTGCGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: WEQMTARSKAKSALTQNPWASWS*WEVRSN
Trigger: GTTGGAGCGCACCTCCCACCAACTCCAGGAGGCCCA...TGGGTTCTGAGTCAGAGCTGACTTTGCTTTTGACCTTGCTGTCATTTGTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CCA 90 bp GTGCTTCCTTCCATTAGGGGAGGCAAGTCACCAACAAGGGCAAGTCAGAGTGGGCAGCTGTGTTTGCCTTaGCCGCCTTATCTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: VLPSIRGGKSPTRASQSGQLCLP*PPYLSG
Trigger: TCCAGAAAGATAAGGCGGCCAAGGCAAACACAGCTG...CCCACTCTGACTTGCCCTTGTTGGTGACTTGCCTCCCCTAATGGAAGGAAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CAA 72 bp TTGTCCTTAAGATTCTGTCCTCTCAGTGAGCCTCACTaGGTGGGTGTGGGTTGGTGCCTGACTCTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LSLRFCPLSEPH*VGVGWCLTLVL
Trigger: CAGCACAAGAGTCAGGCACCAACCCACACCCACCAAGTGAGGCTCACTGAGAGGACAGAATCTTAAGGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CAA 72 bp GGAGTACTGGGCACTGCGCTGAGTTCTTCATGGCCATaGCATGAGACTCTTAAGCTCCATGTGAGGAAGACC +
Preference number: 4 (lower is better)
Translates to: GVLGTALSSSWP*HETLKLHVRKT
Trigger: GGTCTTCCTCACATGGAGCTTAAGAGTCTCATGCAATGGCCATGAAGAACTCAGCGCAGTGCCCAGTACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CAA 72 bp AGTGCAGTGGGCCTGCCATGTTCAGAAGATGCTGTTTaGGTCCAGGCCTCCTCAACCTCTGGCTCTTACAAT +
Preference number: 4 (lower is better)
Translates to: SAVGLPCSEDAV*VQASSTSGSYN
Trigger: ATTGTAAGAGCCAGAGGTTGAGGAGGCCTGGACCAAAACAGCATCTTCTGAACATGGCAGGCCCACTGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CAA 72 bp ATCTGGCTCTATGCCAGGACGCTGACCATCTTAATCTaGCGCAGGTCTTCTACAGGCAACCACAGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: IWLYARTLTILI*RRSSTGNHSSC
Trigger: ACAGCTGCTGTGGTTGCCTGTAGAAGACCTGCGCAAGATTAAGATGGTCAGCGTCCTGGCATAGAGCCAGAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR TCA 90 bp TTGTACCTGCCCTACACACACACACACACACACACACACACACACACACACACACTTAGGGGCAACTCCTaGTGCAGCCTCTGCATGTCT +
Preference number: 4 (lower is better)
Translates to: LYLPYTHTHTHTHTHTHTLRGNS*CSLCMS
Trigger: AGACATGCAGAGGCTGCATCAGGAGTTGCCCCTAAG...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGCAGGTACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR TCA 90 bp CTGCTTGCTCTATGTATTACAGTTCCATCTCTGTCTGGCCAGAACCAGAGGAGCGCAGCCACAGCTGCCTaGCGTCACTTTCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: LLALCITVPSLSGQNQRSAATAA*RHFHLP
Trigger: TGGAAGATGAAAGTGACGTCAGGCAGCTGTGGCTGC...GCTCCTCTGGTTCTGGCCAGACAGAGATGGAACTGTAATACATAGAGCAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR GCA 90 bp GTACCAAAGGCCTGTGGAGTACTGGGCACTGCGCTGAGTTCTTCATGGCCATTGACAGAGCCAGATCTTTaGTTCCTGCTTGCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: VPKACGVLGTALSSSWPLTEPDL*FLLALE
Trigger: TTCCAAGGCAAGCAGGAAGCAAAGATCTGGCTCTGT...CAATGGCCATGAAGAACTCAGCGCAGTGCCCAGTACTCCACAGGCCTTTGGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR GCA 90 bp TTCATACGTATGATTAGAGGGTCTCCTGAGGAGAGTGGGAAGCCCAGAATTAGGTCTTTTCCAACAGGCTaGCCTCGGGGAGAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: FIRMIRGSPEESGKPRIRSFPTG*PRGEVG
Trigger: CCCTACCTCTCCCCGAGGGCAGCCTGTTGGAAAAGA...CCTAATTCTGGGCTTCCCACTCTCCTCAGGAGACCCTCTAATCATACGTATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR GCA 90 bp GTGCCAACTATATGGTGTGTACAAGAGACTCACGTTAGAGATACAGAGATTGAACCACAGTGGCCGCCATaGCTGGGGAGAAGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: VPTIWCVQETHVRDTEIEPQWPP*LGRSGP
Trigger: AGGCCCGCTTCTCCCCAGGCATGGCGGCCACTGTGG...TTCAATCTCTGTATCTCTAACGTGAGTCTCTTGTACACACCATATAGTTGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR GCA 90 bp TTCATACGTATGATTAGAGGGTCTCCTGAGGAGAGTGGGAAGCCCAGAATTAGGCTGCAGGGCCACCTGTaGGTTGTCCACAGTGACTGT +
Preference number: 4 (lower is better)
Translates to: FIRMIRGSPEESGKPRIRLQGHL*VVHSDC
Trigger: ACAGTCACTGTGGACAACGCACAGGTGGCCCTGCAG...CCTAATTCTGGGCTTCCCACTCTCCTCAGGAGACCCTCTAATCATACGTATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CCA 90 bp CTGCTTGCTCTATGTATTACAGTTCCATCTCTGTCTGGCCAGAACCAGAGGAGCTACACTTTCTCCTCTTaGAGCTGGGCCACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LLALCITVPSLSGQNQRSYTFSS*SWATCW
Trigger: CCAGCAGGTGGCCCAGCTCCAAGAGGAGAAAGTGTA...GCTCCTCTGGTTCTGGCCAGACAGAGATGGAACTGTAATACATAGAGCAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CCA 90 bp TTGTACCTGCCCTACACACACACACACACACACACACACACACACACACACACACCAGCTCCTGCTCCTTaGCGCTCAGCTTCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LYLPYTHTHTHTHTHTHTPAPAP*RSASFP
Trigger: TGGAAAAGAAGCTGAGCGCCAAGGAGCAGGAGCTGG...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGCAGGTACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CCA 90 bp CTGCTTGCTCTATGTATTACAGTTCCATCTCTGTCTGGCCAGAACCAGAGGAGCTGTAGAGCTGCACACTaGCCTTCCAGCTTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LLALCITVPSLSGQNQRSCRAAH*PSSFLC
Trigger: GCAGAGGAAGCTGGAAGGCCAGTGTGCAGCTCTACA...GCTCCTCTGGTTCTGGCCAGACAGAGATGGAACTGTAATACATAGAGCAAGCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CCA 90 bp GGAGTACTGGGCACTGCGCTGAGTTCTTCATGGCCATTGCATGAGACTCTTAAGGGGGGCCAACCTGAATaGTGTCGTTTCTCACTGTGT +
Preference number: 4 (lower is better)
Translates to: GVLGTALSSSWPLHETLKGGQPE*CRFSLC
Trigger: ACACAGTGAGAAACGACACCATTCAGGTTGGCCCCC...CTTAAGAGTCTCATGCAATGGCCATGAAGAACTCAGCGCAGTGCCCAGTACTCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR GCA 90 bp GTACCAAAGGCCTGTGGAGTACTGGGCACTGCGCTGAGTTCTTCATGGCCATTGTCTTTCAGGAGGAACTaGTCCCTCTCACTTTTGATC +
Preference number: 4 (lower is better)
Translates to: VPKACGVLGTALSSSWPLSFRRN*SLSLLI
Trigger: GATCAAAAGTGAGAGGGAGCAGTTCCTCCTGAAAGA...CAATGGCCATGAAGAACTCAGCGCAGTGCCCAGTACTCCACAGGCCTTTGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR GCA 90 bp CTGCTTGCTCTATGTATTACAGTTCCATCTCTGTCTGGCCAGAACCAGAGGAGCTCCCAGGTCCTCTTCTaGCTGGAGATATGCACTCAG +
Preference number: 4 (lower is better)
Translates to: LLALCITVPSLSGQNQRSSQVLF*LEICTQ
Trigger: CTGAGTGCATATCTCCAGGCAGAAGAGGACCTGGGA...GCTCCTCTGGTTCTGGCCAGACAGAGATGGAACTGTAATACATAGAGCAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR GCA 90 bp ATGAAATACCCCAGGGAGACTGAAGAAGCAAACCCTAAGCAGGAACGAAACACCCAGCGATATCTCTCCTaGCCAGCAGTATCCCACAGC +
Preference number: 4 (lower is better)
Translates to: MKYPRETEEANPKQERNTQRYLS*PAVSHS
Trigger: GCTGTGGGATACTGCTGGGCAGGAGAGATATCGCTG...GGTGTTTCGTTCCTGCTTAGGGTTTGCTTCTTCAGTCTCCCTGGGGTATTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR GCA 90 bp GGAGTACTGGGCACTGCGCTGAGTTCTTCATGGCCATTGCATGAGACTCTTAAGATCGACAGGAAGGACTaGTTGGCTGTGAGGTCATAC +
Preference number: 4 (lower is better)
Translates to: GVLGTALSSSWPLHETLKIDRKD*LAVRSY
Trigger: GTATGACCTCACAGCCAAGCAGTCCTTCCTGTCGAT...CTTAAGAGTCTCATGCAATGGCCATGAAGAACTCAGCGCAGTGCCCAGTACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CCA 90 bp GAGTGTGTCATCAGAGACATCACAAGCCACCCTATGCATCCAAGCAAAGAGCTGGCTTCCTGCTTGCCTTaGAAGCAGCTGTGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: ECVIRDITSHPMHPSKELASCLP*KQLCLP
Trigger: AGGCAAACACAGCTGCTTCCAAGGCAAGCAGGAAGC...CAGCTCTTTGCTTGGATGCATAGGGTGGCTTGTGATGTCTCTGATGACACACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR GCA 90 bp GAGTGTGTCATCAGAGACATCACAAGCCACCCTATGCATCCAAGCAAAGAGCTGCAGATCTTTGCTTCCTaGTTGCCTTGGAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: ECVIRDITSHPMHPSKELQIFAS*LPWKQL
Trigger: CAGCTGCTTCCAAGGCAAGCAGGAAGCAAAGATCTG...CAGCTCTTTGCTTGGATGCATAGGGTGGCTTGTGATGTCTCTGATGACACACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR GCA 90 bp CCTGTCCCTACTTCTCCTAGACCTCTAAAGAACCATGGCACTTGTCACATGTCCTGCCATCCACGTATTTaGCGATCACAGAGCCAGATC +
Preference number: 4 (lower is better)
Translates to: PVPTSPRPLKNHGTCHMSCHPRI*RSQSQI
Trigger: GATCTGGCTCTGTGATCGGCAAATACGTGGATGGCA...GGACATGTGACAAGTGCCATGGTTCTTTAGAGGTCTAGGAGAAGTAGGGACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CCA 90 bp GGAGTACTGGGCACTGCGCTGAGTTCTTCATGGCCATTGCATGAGACTCTTAAGTGCTGTTCTCAGCCTTaGTTTCGTGCTTGTCGTTGT +
Preference number: 4 (lower is better)
Translates to: GVLGTALSSSWPLHETLKCCSQP*FRACRC
Trigger: ACAACGACAAGCACGAAACCAAGGCTGAGAACAGCA...CTTAAGAGTCTCATGCAATGGCCATGAAGAACTCAGCGCAGTGCCCAGTACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CCA 90 bp GTGCCAACTATATGGTGTGTACAAGAGACTCACGTTAGAGATACAGAGATTGAATCGCAGGCCTCTCTCTaGAGGCTCTCCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VPTIWCVQETHVRDTEIESQASL*RLSSCC
Trigger: GCAGCAGCTGGAGAGCCTCCAGAGAGAGGCCTGCGA...TTCAATCTCTGTATCTCTAACGTGAGTCTCTTGTACACACCATATAGTTGGCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR GCA 90 bp TGGGAACAAATGACAGCAAGGTCAAAAGCAAAGTCAGCTCTGACTCAGAACCCAAGCTGCAGCCACAGCTaGCTGACGTCACTTTCATCT +
Preference number: 4 (lower is better)
Translates to: WEQMTARSKAKSALTQNPSCSHS*LTSLSS
Trigger: AGATGAAAGTGACGTCAGGCAGCTGTGGCTGCAGCT...TGGGTTCTGAGTCAGAGCTGACTTTGCTTTTGACCTTGCTGTCATTTGTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR TCA 90 bp ATGAAATACCCCAGGGAGACTGAAGAAGCAAACCCTAAGCAGGAACGAAACACCGAGCAAAAATTGTGGTaGGGAGGTCTTCGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: MKYPRETEEANPKQERNTEQKLW*GGLRSW
Trigger: CCAACTTCGAAGACCTCCTCACCACAATTTTTGCTC...GGTGTTTCGTTCCTGCTTAGGGTTTGCTTCTTCAGTCTCCCTGGGGTATTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR GCA 90 bp TGGGAACAAATGACAGCAAGGTCAAAAGCAAAGTCAGCTCTGACTCAGAACCCATCCAGTTCGTTCTTCTaGTCATGGGCTTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: WEQMTARSKAKSALTQNPSSSFF*SWASWS
Trigger: GCTCCAAGAAGCCCATGAGCAGAAGAACGAACTGGA...TGGGTTCTGAGTCAGAGCTGACTTTGCTTTTGACCTTGCTGTCATTTGTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR GCA 90 bp TGGGAACAAATGACAGCAAGGTCAAAAGCAAAGTCAGCTCTGACTCAGAACCCAGGAAGCAGCTGTGTTTaGCTTGGCCGCCTTATCTTT +
Preference number: 4 (lower is better)
Translates to: WEQMTARSKAKSALTQNPGSSCV*LGRLIF
Trigger: AAAGATAAGGCGGCCAAGGCAAACACAGCTGCTTCC...TGGGTTCTGAGTCAGAGCTGACTTTGCTTTTGACCTTGCTGTCATTTGTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR TCA 90 bp TTGTACCTGCCCTACACACACACACACACACACACACACACACACACACACACACTGTCCATCAGCATCTaGAATTGTGCTTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: LYLPYTHTHTHTHTHTHTLSISI*NCASSS
Trigger: TGATGAAGAAGCACAATTTCAGATGCTGATGGACAG...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGCAGGTACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR GCA 90 bp CTGCTTGCTCTATGTATTACAGTTCCATCTCTGTCTGGCCAGAACCAGAGGAGCGACCCGAACAGGCACTaGATTCATAGAAGATCAAAT +
Preference number: 4 (lower is better)
Translates to: LLALCITVPSLSGQNQRSDPNRH*IHRRSN
Trigger: ATTTGATCTTCTATGAATGCAGTGCCTGTTCGGGTC...GCTCCTCTGGTTCTGGCCAGACAGAGATGGAACTGTAATACATAGAGCAAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CCA 90 bp GTGCCAACTATATGGTGTGTACAAGAGACTCACGTTAGAGATACAGAGATTGAATCCTCCTCCTCTGACTaGCTCCTGAGAATTCCCCTG +
Preference number: 4 (lower is better)
Translates to: VPTIWCVQETHVRDTEIESSSSD*LLRIPL
Trigger: CAGGGGAATTCTCAGGAGCCAGTCAGAGGAGGAGGA...TTCAATCTCTGTATCTCTAACGTGAGTCTCTTGTACACACCATATAGTTGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
3UTR CAA 72 bp ATGAAACAAATGAAGCCAATAATTACAGACTTAGTGTaGGACGCCACTCCCCTCCACACACACGCCTGTCAA +
Preference number: 4 (lower is better)
Translates to: MKQMKPIITDLV*DATPLHTHACQ
Trigger: TTGACAGGCGTGTGTGTGGAGGGGAGTGGCGTCCAACACTAAGTCTGTAATTATTGGCTTCATTTGTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS GCA 90 bp TCCTGCTGCAGCTCGCAGGCCTCTCTCTGGAGGCTCTCCAGCTGCTaGTGGGCCTCCTGGAGTTGGTGGGAGGTGCGCTCCAACTCCCGG +
Preference number: 5 (lower is better)
Translates to: SCCSSQASLWRLSSC*WASWSWWEVRSNSR
Trigger: CCGGGAGTTGGAGCGCACCTCCCACCAACTCCAGGAGGCCCAGCAGCAGCTGGAGAGCCTCCAGAGAGAGGCCTGCGAGCTGCAGCAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS GCA 90 bp TTCTCCTGCTGCAGCTCGCAGGCCTCTCTCTGGAGGCTCTCCAGCTaGTGCTGGGCCTCCTGGAGTTGGTGGGAGGTGCGCTCCAACTCC +
Preference number: 5 (lower is better)
Translates to: FSCCSSQASLWRLSS*CWASWSWWEVRSNS
Trigger: GGAGTTGGAGCGCACCTCCCACCAACTCCAGGAGGCCCAGCAGCAGCTGGAGAGCCTCCAGAGAGAGGCCTGCGAGCTGCAGCAGGAGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS TCA 90 bp GGGTGGTCCAGTTGCTCCACGCAGGCTCCACTTCCCTGCTTCCCATaGCCTGGTGTCTGGGAGCTGGAGTCTTCTCTTCCACTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: GWSSCSTQAPLPCFP*PGVWELESSLPLGV
Trigger: CACCCCCAGTGGAAGAGAAGACTCCAGCTCCCAGACACCAGGTCATGGGAAGCAGGGAAGTGGAGCCTGCGTGGAGCAACTGGACCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071563.5
ENSMUST00000212051.2
CDS GCA 90 bp GAGCTGAGGCAGGGGATCCTCCTCAATGGAGATGATCCTTCGGAGTaGCTGGCGACGTGGAACACCAGACCCTGGCTCCCCAGTTCCCAG +
Preference number: 5 (lower is better)
Translates to: ELRQGILLNGDDPSE*LATWNTRPWLPSSQ
Trigger: CTGGGAACTGGGGAGCCAGGGTCTGGTGTTCCACGTCGCCAGGCACTCCGAAGGATCATCTCCATTGAGGAGGATCCCCTGCCTCAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS GCA 90 bp CGCTGCAGGCTTTCAGTCACTCGGTACACTTCCATCTCCTTCTCCTaGTGCAGCTCGCAGGCCTCTCTCTGGAGGCTCTCCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: RCRLSVTRYTSISFS*CSSQASLWRLSSCC
Trigger: GCAGCAGCTGGAGAGCCTCCAGAGAGAGGCCTGCGAGCTGCAGCAGGAGAAGGAGATGGAAGTGTACCGAGTGACTGAAAGCCTGCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS CCA 90 bp GTCCAGTTGCTCCACGCAGGCTCCACTTCCCTGCTTCCCATGACCTaGTGTCTGGGAGCTGGAGTCTTCTCTTCCACTGGGGGTGGCCAT +
Preference number: 5 (lower is better)
Translates to: VQLLHAGSTSLLPMT*CLGAGVFSSTGGGH
Trigger: ATGGCCACCCCCAGTGGAAGAGAAGACTCCAGCTCCCAGACACCAGGTCATGGGAAGCAGGGAAGTGGAGCCTGCGTGGAGCAACTGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071563.5
ENSMUST00000212051.2
CDS GCA 90 bp AGGCTGCCCTCGGGGAGAGGTAGGGATGAGATCCAAGACTGGGGCTaGCACGCTTTGTCTTTCTGTTCCCTGGTCAGAGACCTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: RLPSGRGRDEIQDWG*HALSFCSLVRDLLL
Trigger: GAGGAGGAGGTCTCTGACCAGGGAACAGAAAGACAAAGCGTGGCAGCCCCAGTCTTGGATCTCATCCCTACCTCTCCCCGAGGGCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS CCA 90 bp GGAGATGATCCTTCGGAGTGCCTGGCGACGTGGAACACCAGACCCTaGCTCCCCAGTTCCCAGGTCCTCTTCTGCCTGGAGATATGCACT +
Preference number: 5 (lower is better)
Translates to: GDDPSECLATWNTRP*LPSSQVLFCLEICT
Trigger: AGTGCATATCTCCAGGCAGAAGAGGACCTGGGAACTGGGGAGCCAGGGTCTGGTGTTCCACGTCGCCAGGCACTCCGAAGGATCATCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CAA 90 bp TGGAGCACGGGTGACCCCTGGTTCTCGCTCCCTAGAAGCCACCAGCAGCTCCTCCACAGAGCCAGATCTTaGCTTCCTGCTTGCCTTGGA +
Preference number: 5 (lower is better)
Translates to: WSTGDPWFSLPRSHQQLLHRARS*LPACLG
Trigger: TCCAAGGCAAGCAGGAAGCAAAGATCTGGCTCTGTG...GAGGAGCTGCTGGTGGCTTCTAGGGAGCGAGAACCAGGGGTCACCCGTGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS GCA 90 bp CCAGCTCCTGCTCCTTGGCGCTCAGCTTCTTTTCCAACTCCCGGCTaGGAGCCTGGAATCTCTCTGTGTCTTTCAGGAGGAACTGCTCCC +
Preference number: 5 (lower is better)
Translates to: PAPAPWRSASFPTPG*EPGISLCLSGGTAP
Trigger: GGGAGCAGTTCCTCCTGAAAGACACAGAGAGATTCCAGGCTCGCAGCCGGGAGTTGGAAAAGAAGCTGAGCGCCAAGGAGCAGGAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071563.5
ENSMUST00000212051.2
CDS GCA 90 bp GCTTCCTCCACGCTGCTGAGCCACTGGCGGATCGACAGGAAGGACTaGTTGGCTGTGAGGTCATACATAACAGCCACACCGTCGGCCTTT +
Preference number: 5 (lower is better)
Translates to: ASSTLLSHWRIDRKD*LAVRSYITATPSAF
Trigger: AAAGGCCGACGGTGTGGCTGTTATGTATGACCTCACAGCCAAGCAGTCCTTCCTGTCGATCCGCCAGTGGCTCAGCAGCGTGGAGGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS TCA 90 bp AGTTCCCAGGTCCTCTTCTGCCTGGAGATATGCACTCAGACCCACTaGGCTTCTCCTCCTGGGGGCGCTGAATACGTCTTCCTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: SSQVLFCLEICTQTH*ASPPGGAEYVFLLL
Trigger: GAGGAGGAGGAAGACGTATTCAGCGCCCCCAGGAGGAGAAGCTCAGTGGGTCTGAGTGCATATCTCCAGGCAGAAGAGGACCTGGGAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS GCA 90 bp CCAGGCCCCGGGGCACTTCCCGCTCCTTCTCATTGTCAAGTTTATTaGCCAGCAGCAGAACAGGAATTCGGTCTCCCACAGCTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: PGPGALPAPSHCQVY*PAAEQEFGLPQLPP
Trigger: TGGAGGAAGCTGTGGGAGACCGAATTCCTGTTCTGCTGCTGGGCAATAAACTTGACAATGAGAAGGAGCGGGAAGTGCCCCGGGGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CAA 90 bp GGAGTACTGGGCACTGCGCTGAGTTCTTCATGGCCATTGCATGAGACTCTTAAGCTGGGCCTCCTGGAGTaGGTGGGAGGTGCGCTCCAA +
Preference number: 5 (lower is better)
Translates to: GVLGTALSSSWPLHETLKLGLLE*VGGALQ
Trigger: TTGGAGCGCACCTCCCACCAACTCCAGGAGGCCCAG...CTTAAGAGTCTCATGCAATGGCCATGAAGAACTCAGCGCAGTGCCCAGTACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CAA 90 bp TGGAGCACGGGTGACCCCTGGTTCTCGCTCCCTAGAAGCCACCAGCAGCTCCTCTCGTCCCGGAGATGTTaGTTCCTTTCCCTTAGGAAA +
Preference number: 5 (lower is better)
Translates to: WSTGDPWFSLPRSHQQLLSSRRC*FLSLRK
Trigger: TTTCCTAAGGGAAAGGAACAAACATCTCCGGGACGA...GAGGAGCTGCTGGTGGCTTCTAGGGAGCGAGAACCAGGGGTCACCCGTGCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS TCA 90 bp GGCCCACGATGTCTCCACAGTAGCCTACCTTCCTCTGCTTCTGATTaGGTCGCTCCAGCTCCTGCTCCTTGGCGCTCAGCTTCTTTTCCA +
Preference number: 5 (lower is better)
Translates to: GPRCLHSSLPSSASD*VAPAPAPWRSASFP
Trigger: TGGAAAAGAAGCTGAGCGCCAAGGAGCAGGAGCTGGAGCGACTCAATCAGAAGCAGAGGAAGGTAGGCTACTGTGGAGACATCGTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000071563.5
CDS CCA 90 bp GGTCTGGAAGAATTCCTGTGCTTTCTTCCACATGGCACTCTGGTCTaGCATCTCCACCTCCAGCTTCTCCGGGTGGTCCAGTTGCTCCAC +
Preference number: 5 (lower is better)
Translates to: GLEEFLCFLPHGTLV*HLHLQLLRVVQLLH
Trigger: GTGGAGCAACTGGACCACCCGGAGAAGCTGGAGGTGGAGATGCCAGACCAGAGTGCCATGTGGAAGAAAGCACAGGAATTCTTCCAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071563.5
ENSMUST00000212051.2
CDS CCA 90 bp CTTCTCCTCCTGGGGGCGCTGAATACGTCTTCCTCCTCCTCTGACTaGCTCCTGAGAATTCCCCTGCCATCCACGTATTTGCCGATCACA +
Preference number: 5 (lower is better)
Translates to: LLLLGALNTSSSSSD*LLRIPLPSTYLPIT
Trigger: TGTGATCGGCAAATACGTGGATGGCAGGGGAATTCTCAGGAGCCAGTCAGAGGAGGAGGAAGACGTATTCAGCGCCCCCAGGAGGAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CAA 90 bp GGCCTTCAAGAAGCAGCAAGTTGCCCCTGCACTGTTGCCATGGCAACCACAGCGCTGCCATCCACGTATTaGCCGATCACAGAGCCAGAT +
Preference number: 5 (lower is better)
Translates to: GLQEAASCPCTVAMATTALPSTY*PITEPD
Trigger: ATCTGGCTCTGTGATCGGCAAATACGTGGATGGCAG...CGCTGTGGTTGCCATGGCAACAGTGCAGGGGCAACTTGCTGCTTCTTGAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CAA 90 bp TTCATACGTATGATTAGAGGGTCTCCTGAGGAGAGTGGGAAGCCCAGAATTAGGGTTCTCCTTGGCGAGTaGCTCTCCCAGGCCCCGGGG +
Preference number: 5 (lower is better)
Translates to: FIRMIRGSPEESGKPRIRVLLGE*LSQAPG
Trigger: CCCCGGGGCCTGGGAGAGCAACTCGCCAAGGAGAAC...CCTAATTCTGGGCTTCCCACTCTCCTCAGGAGACCCTCTAATCATACGTATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS TCA 90 bp AAAAATCCATGGACGAATGGTGGAGGGCGTGAGGCAGAGGCAAGCTaGGTTGGAAGAGCTGAGGGCCCACGATGTCTCCACAGTAGCCTA +
Preference number: 5 (lower is better)
Translates to: KNPWTNGGGREAEAS*VGRAEGPRCLHSSL
Trigger: TAGGCTACTGTGGAGACATCGTGGGCCCTCAGCTCTTCCAACTCAGCTTGCCTCTGCCTCACGCCCTCCACCATTCGTCCATGGATTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000071563.5
CDS GCA 90 bp AGGTCTTCGAAGTTGGACAGCAGGTGGGGCTCGTCCTTCCTCAGCTaGAGCCACAGCTGCCTGACGTCACTTTCATCTTCCAGAACTTTC +
Preference number: 5 (lower is better)
Translates to: RSSKLDSRWGSSFLS*SHSCLTSLSSSRTF
Trigger: GAAAGTTCTGGAAGATGAAAGTGACGTCAGGCAGCTGTGGCTGCAGCTGAGGAAGGACGAGCCCCACCTGCTGTCCAACTTCGAAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071563.5
ENSMUST00000212051.2
CDS GCA 90 bp ATTCCCCTGCCATCCACGTATTTGCCGATCACAGAGCCAGATCTTTaGTTCCTGCTTGCCTTGGAAGCAGCTGTGTTTGCCTTGGCCGCC +
Preference number: 5 (lower is better)
Translates to: IPLPSTYLPITEPDL*FLLALEAAVFALAA
Trigger: GGCGGCCAAGGCAAACACAGCTGCTTCCAAGGCAAGCAGGAAGCAAAGATCTGGCTCTGTGATCGGCAAATACGTGGATGGCAGGGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CAA 90 bp GGCCTTCAAGAAGCAGCAAGTTGCCCCTGCACTGTTGCCATGGCAACCACAGCGGACAGGAAGGACTGCTaGGCTGTGAGGTCATACATA +
Preference number: 5 (lower is better)
Translates to: GLQEAASCPCTVAMATTADRKDC*AVRSYI
Trigger: TATGTATGACCTCACAGCCAAGCAGTCCTTCCTGTC...CGCTGTGGTTGCCATGGCAACAGTGCAGGGGCAACTTGCTGCTTCTTGAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS TCA 90 bp CGTTCTTCTGCTCATGGGCTTCTTGGAGCTGAGCAAAAATTGTGGTaGGGAGGTCTTCGAAGTTGGACAGCAGGTGGGGCTCGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: RSSAHGLLGAEQKLW*GGLRSWTAGGARPS
Trigger: GGAAGGACGAGCCCCACCTGCTGTCCAACTTCGAAGACCTCCTCACCACAATTTTTGCTCAGCTCCAAGAAGCCCATGAGCAGAAGAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000071563.5
ENSMUST00000212051.2
CDS GCA 90 bp AATGAAGCCCTTGCCCTCGGAGTCACAGGTCTGGAAGAATTCCTGTaGTTTCTTCCACATGGCACTCTGGTCTGGCATCTCCACCTCCAG +
Preference number: 5 (lower is better)
Translates to: NEALALGVTGLEEFL*FLPHGTLVWHLHLQ
Trigger: CTGGAGGTGGAGATGCCAGACCAGAGTGCCATGTGGAAGAAAGCACAGGAATTCTTCCAGACCTGTGACTCCGAGGGCAAGGGCTTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071563.5
ENSMUST00000212051.2
CDS GCA 90 bp TCCCTTAGGAAATCCAGCTGTTTCAGGAGGCCAGACTTCTCCCGCTaGAGGCTTTCAGTCACTCGGTACACTTCCATCTCCTTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: SLRKSSCFRRPDFSR*RLSVTRYTSISFSC
Trigger: GCAGGAGAAGGAGATGGAAGTGTACCGAGTGACTGAAAGCCTGCAGCGGGAGAAGTCTGGCCTCCTGAAACAGCTGGATTTCCTAAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS CCA 90 bp ATGTCTGTCCTGGCAATGAAGCCCTTGCCCTCGGAGTCACAGGTCTaGAAGAATTCCTGTGCTTTCTTCCACATGGCACTCTGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: MSVLAMKPLPSESQV*KNSCAFFHMALWSG
Trigger: GCCAGACCAGAGTGCCATGTGGAAGAAAGCACAGGAATTCTTCCAGACCTGTGACTCCGAGGGCAAGGGCTTCATTGCCAGGACAGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071563.5
ENSMUST00000212051.2
CDS-3UTR CAA 90 bp CATGACCCATGTGCTGAAAGCAGCTCTCTGGTTTCTGGAGAACAGGGGCCAAAGATACACTTTCTCCTCTaGGAGCTGGGCCACCTGCTG +
Preference number: 5 (lower is better)
Translates to: HDPCAESSSLVSGEQGPKIHFLL*ELGHLL
Trigger: CAGCAGGTGGCCCAGCTCCAAGAGGAGAAAGTGTAT...CTTTGGCCCCTGTTCTCCAGAAACCAGAGAGCTGCTTTCAGCACATGGGTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CAA 90 bp GTACCAAAGGCCTGTGGAGTACTGGGCACTGCGCTGAGTTCTTCATGGCCATTGTGCTCCCTCTCACTTTaGATCTGCTGCTCCATCTCC +
Preference number: 5 (lower is better)
Translates to: VPKACGVLGTALSSSWPLCSLSL*ICCSIS
Trigger: GGAGATGGAGCAGCAGATCAAAAGTGAGAGGGAGCA...CAATGGCCATGAAGAACTCAGCGCAGTGCCCAGTACTCCACAGGCCTTTGGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS GCA 90 bp CCAGGTGGAGCAGGGACTCTTGGGCGTTGTGACCCGAACAGGCACTaGATTCATAGAAGATCAAATTGTTCTCCTTGGCGAGTTGCTCTC +
Preference number: 5 (lower is better)
Translates to: PGGAGTLGRCDPNRH*IHRRSNCSPWRVAL
Trigger: GAGAGCAACTCGCCAAGGAGAACAATTTGATCTTCTATGAATGCAGTGCCTGTTCGGGTCACAACGCCCAAGAGTCCCTGCTCCACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CAA 90 bp GAGTGTGTCATCAGAGACATCACAAGCCACCCTATGCATCCAAGCAAAGAGCTGTCCAGCTCCTGCTCCTaGGCGCTCAGCTTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: ECVIRDITSHPMHPSKELSSSCS*ALSFFS
Trigger: GGAAAAGAAGCTGAGCGCCAAGGAGCAGGAGCTGGA...CAGCTCTTTGCTTGGATGCATAGGGTGGCTTGTGATGTCTCTGATGACACACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CAA 90 bp GTGCTTCCTTCCATTAGGGGAGGCAAGTCACCAACAAGGGCAAGTCAGAGTGGGATCAAATTGTTCTCCTaGGCGAGTTGCTCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: VLPSIRGGKSPTRASQSGIKLFS*ASCSPR
Trigger: CCTGGGAGAGCAACTCGCCAAGGAGAACAATTTGAT...CCCACTCTGACTTGCCCTTGTTGGTGACTTGCCTCCCCTAATGGAAGGAAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CAA 90 bp TTCATACGTATGATTAGAGGGTCTCCTGAGGAGAGTGGGAAGCCCAGAATTAGGGTGGAGCAGGGACTCTaGGGCGTTGTGACCCGAACA +
Preference number: 5 (lower is better)
Translates to: FIRMIRGSPEESGKPRIRVEQGL*GVVTRT
Trigger: TGTTCGGGTCACAACGCCCAAGAGTCCCTGCTCCAC...CCTAATTCTGGGCTTCCCACTCTCCTCAGGAGACCCTCTAATCATACGTATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS GCA 90 bp TGCCATCCACGTATTTGCCGATCACAGAGCCAGATCTTTGCTTCCTaGTTGCCTTGGAAGCAGCTGTGTTTGCCTTGGCCGCCTTATCTT +
Preference number: 5 (lower is better)
Translates to: CHPRICRSQSQIFAS*LPWKQLCLPWPPYL
Trigger: AAGATAAGGCGGCCAAGGCAAACACAGCTGCTTCCAAGGCAAGCAGGAAGCAAAGATCTGGCTCTGTGATCGGCAAATACGTGGATGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS CCA 90 bp CAGATCTTTGCTTCCTGCTTGCCTTGGAAGCAGCTGTGTTTGCCTTaGCCGCCTTATCTTTCTGGAAAGTTATGTCCCGTTCGTCCCGGA +
Preference number: 5 (lower is better)
Translates to: QIFASCLPWKQLCLP*PPYLSGKLCPVRPG
Trigger: TCCGGGACGAACGGGACATAACTTTCCAGAAAGATAAGGCGGCCAAGGCAAACACAGCTGCTTCCAAGGCAAGCAGGAAGCAAAGATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS TCA 90 bp AGGGCACATTCCAGTTCGTTCTTCTGCTCATGGGCTTCTTGGAGCTaGGCAAAAATTGTGGTGAGGAGGTCTTCGAAGTTGGACAGCAGG +
Preference number: 5 (lower is better)
Translates to: RAHSSSFFCSWASWS*AKIVVRRSSKLDSR
Trigger: CCTGCTGTCCAACTTCGAAGACCTCCTCACCACAATTTTTGCTCAGCTCCAAGAAGCCCATGAGCAGAAGAACGAACTGGAATGTGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071563.5
ENSMUST00000212051.2
CDS GCA 90 bp AGAGCCAGATCTTTGCTTCCTGCTTGCCTTGGAAGCAGCTGTGTTTaGCTTGGCCGCCTTATCTTTCTGGAAAGTTATGTCCCGTTCGTC +
Preference number: 5 (lower is better)
Translates to: RARSLLPACLGSSCV*LGRLIFLESYVPFV
Trigger: GACGAACGGGACATAACTTTCCAGAAAGATAAGGCGGCCAAGGCAAACACAGCTGCTTCCAAGGCAAGCAGGAAGCAAAGATCTGGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CAA 90 bp CCTGTCCCTACTTCTCCTAGACCTCTAAAGAACCATGGCACTTGTCACATGTCCTGGAAGCAGCTGTGTTaGCCTTGGCCGCCTTATCTT +
Preference number: 5 (lower is better)
Translates to: PVPTSPRPLKNHGTCHMSWKQLC*PWPPYL
Trigger: AAGATAAGGCGGCCAAGGCAAACACAGCTGCTTCCA...GGACATGTGACAAGTGCCATGGTTCTTTAGAGGTCTAGGAGAAGTAGGGACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CAA 90 bp GGAGTACTGGGCACTGCGCTGAGTTCTTCATGGCCATTGCATGAGACTCTTAAGTCCCGCTCCTTCTCATaGTCAAGTTTATTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: GVLGTALSSSWPLHETLKSRSFS*SSLLPS
Trigger: GCTGGGCAATAAACTTGACAATGAGAAGGAGCGGGA...CTTAAGAGTCTCATGCAATGGCCATGAAGAACTCAGCGCAGTGCCCAGTACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CAA 90 bp CCTGTCCCTACTTCTCCTAGACCTCTAAAGAACCATGGCACTTGTCACATGTCCATCTTTGCTTCCTGCTaGCCTTGGAAGCAGCTGTGT +
Preference number: 5 (lower is better)
Translates to: PVPTSPRPLKNHGTCHMSIFASC*PWKQLC
Trigger: ACACAGCTGCTTCCAAGGCAAGCAGGAAGCAAAGAT...GGACATGTGACAAGTGCCATGGTTCTTTAGAGGTCTAGGAGAAGTAGGGACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS TCA 90 bp TCATCTTCCAGAACTTTCTGGGCTCCAAGTCTGTCCATCAGCATCTaGAATTGTGCTTCTTCATCATGGTCCATGTCTCCCACATCCTCC +
Preference number: 5 (lower is better)
Translates to: SSSRTFWAPSLSISI*NCASSSWSMSPTSS
Trigger: GGAGGATGTGGGAGACATGGACCATGATGAAGAAGCACAATTTCAGATGCTGATGGACAGACTTGGAGCCCAGAAAGTTCTGGAAGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071563.5
ENSMUST00000212051.2
CDS-3UTR CAA 90 bp TTCATACGTATGATTAGAGGGTCTCCTGAGGAGAGTGGGAAGCCCAGAATTAGGAGCTTCTTCCTCTCCTaGGATATTTTGACTGAAGAA +
Preference number: 5 (lower is better)
Translates to: FIRMIRGSPEESGKPRIRSFFLS*DILTEE
Trigger: TTCTTCAGTCAAAATATCCAAGGAGAGGAAGAAGCT...CCTAATTCTGGGCTTCCCACTCTCCTCAGGAGACCCTCTAATCATACGTATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS-3UTR CAA 90 bp GTGCCAACTATATGGTGTGTACAAGAGACTCACGTTAGAGATACAGAGATTGAACTGCTCATGGGCTTCTaGGAGCTGAGCAAAAATTGT +
Preference number: 5 (lower is better)
Translates to: VPTIWCVQETHVRDTEIELLMGF*ELSKNC
Trigger: ACAATTTTTGCTCAGCTCCAAGAAGCCCATGAGCAG...TTCAATCTCTGTATCTCTAACGTGAGTCTCTTGTACACACCATATAGTTGGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS GCA 72 bp TGCAGCTCGCAGGCCTCTCTCTGGAGGCTCTCCAGCTaGTGCTGGGCCTCCTGGAGTTGGTGGGAGGTGCGC +
Preference number: 6 (lower is better)
Translates to: CSSQASLWRLSS*CWASWSWWEVR
Trigger: GCGCACCTCCCACCAACTCCAGGAGGCCCAGCAGCAGCTGGAGAGCCTCCAGAGAGAGGCCTGCGAGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS CCA 72 bp TCGCAGGCCTCTCTCTGGAGGCTCTCCAGCTGCTGCTaGGCCTCCTGGAGTTGGTGGGAGGTGCGCTCCAAC +
Preference number: 6 (lower is better)
Translates to: SQASLWRLSSCC*ASWSWWEVRSN
Trigger: GTTGGAGCGCACCTCCCACCAACTCCAGGAGGCCCAGCAGCAGCTGGAGAGCCTCCAGAGAGAGGCCTGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS CCA 72 bp CGGTCTCCCACAGCTTCCTCCACGCTGCTGAGCCACTaGCGGATCGACAGGAAGGACTGCTTGGCTGTGAGG +
Preference number: 6 (lower is better)
Translates to: RSPTASSTLLSH*RIDRKDCLAVR
Trigger: CCTCACAGCCAAGCAGTCCTTCCTGTCGATCCGCCAGTGGCTCAGCAGCGTGGAGGAAGCTGTGGGAGACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS GCA 72 bp CAGGGGATCCTCCTCAATGGAGATGATCCTTCGGAGTaGCTGGCGACGTGGAACACCAGACCCTGGCTCCCC +
Preference number: 6 (lower is better)
Translates to: QGILLNGDDPSE*LATWNTRPWLP
Trigger: GGGGAGCCAGGGTCTGGTGTTCCACGTCGCCAGGCACTCCGAAGGATCATCTCCATTGAGGAGGATCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS CAA 90 bp ACTCTGGTCTGGCATCTCCACCTCCAGCTTCTCCGGGTGGTCCAGTaGCTCCACGCAGGCTCCACTTCCCTGCTTCCCATGACCTGGTGT +
Preference number: 6 (lower is better)
Translates to: TLVWHLHLQLLRVVQ*LHAGSTSLLPMTWC
Trigger: ACACCAGGTCATGGGAAGCAGGGAAGTGGAGCCTGCGTGGAGCAACTGGACCACCCGGAGAAGCTGGAGGTGGAGATGCCAGACCAGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071563.5
ENSMUST00000212051.2
CDS TCA 72 bp CCAGGAGCTGAGGCAGGGGATCCTCCTCAATGGAGATaGTCCTTCGGAGTGCCTGGCGACGTGGAACACCAG +
Preference number: 6 (lower is better)
Translates to: PGAEAGDPPQWR*SFGVPGDVEHQ
Trigger: CTGGTGTTCCACGTCGCCAGGCACTCCGAAGGATCATCTCCATTGAGGAGGATCCCCTGCCTCAGCTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS CCA 72 bp CTCCACGCAGGCTCCACTTCCCTGCTTCCCATGACCTaGTGTCTGGGAGCTGGAGTCTTCTCTTCCACTGGG +
Preference number: 6 (lower is better)
Translates to: LHAGSTSLLPMT*CLGAGVFSSTG
Trigger: CCCAGTGGAAGAGAAGACTCCAGCTCCCAGACACCAGGTCATGGGAAGCAGGGAAGTGGAGCCTGCGTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071563.5
ENSMUST00000212051.2
CDS CCA 72 bp TGGTGGGAGGTGCGCTCCAACTCCCGGGCCAGCTCCTaGTTAGTGAGTCTCAGCTTGCTGTTCTCAGCCTTG +
Preference number: 6 (lower is better)
Translates to: WWEVRSNSRASS*LVSLSLLFSAL
Trigger: CAAGGCTGAGAACAGCAAGCTGAGACTCACTAACCAGGAGCTGGCCCGGGAGTTGGAGCGCACCTCCCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS CCA 72 bp CTCAATGGAGATGATCCTTCGGAGTGCCTGGCGACGTaGAACACCAGACCCTGGCTCCCCAGTTCCCAGGTC +
Preference number: 6 (lower is better)
Translates to: LNGDDPSECLAT*NTRPWLPSSQV
Trigger: GACCTGGGAACTGGGGAGCCAGGGTCTGGTGTTCCACGTCGCCAGGCACTCCGAAGGATCATCTCCATTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS TCA 72 bp CCTCCTGGGGGCGCTGAATACGTCTTCCTCCTCCTCTaGCTGGCTCCTGAGAATTCCCCTGCCATCCACGTA +
Preference number: 6 (lower is better)
Translates to: PPGGAEYVFLLL*LAPENSPAIHV
Trigger: TACGTGGATGGCAGGGGAATTCTCAGGAGCCAGTCAGAGGAGGAGGAAGACGTATTCAGCGCCCCCAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS CCA 72 bp GGATCCTCCTCAATGGAGATGATCCTTCGGAGTGCCTaGCGACGTGGAACACCAGACCCTGGCTCCCCAGTT +
Preference number: 6 (lower is better)
Translates to: GSSSMEMILRSA*RRGTPDPGSPV
Trigger: AACTGGGGAGCCAGGGTCTGGTGTTCCACGTCGCCAGGCACTCCGAAGGATCATCTCCATTGAGGAGGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS CAA 90 bp TCCTCCACGCTGCTGAGCCACTGGCGGATCGACAGGAAGGACTGCTaGGCTGTGAGGTCATACATAACAGCCACACCGTCGGCCTTTCTG +
Preference number: 6 (lower is better)
Translates to: SSTLLSHWRIDRKDC*AVRSYITATPSAFL
Trigger: CAGAAAGGCCGACGGTGTGGCTGTTATGTATGACCTCACAGCCAAGCAGTCCTTCCTGTCGATCCGCCAGTGGCTCAGCAGCGTGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS CAA 90 bp CCCAGGCCCCGGGGCACTTCCCGCTCCTTCTCATTGTCAAGTTTATaGCCCAGCAGCAGAACAGGAATTCGGTCTCCCACAGCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: PRPRGTSRSFSLSSL*PSSRTGIRSPTASS
Trigger: GGAGGAAGCTGTGGGAGACCGAATTCCTGTTCTGCTGCTGGGCAATAAACTTGACAATGAGAAGGAGCGGGAAGTGCCCCGGGGCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS CAA 90 bp GCGAGTTGCTCTCCCAGGCCCCGGGGCACTTCCCGCTCCTTCTCATaGTCAAGTTTATTGCCCAGCAGCAGAACAGGAATTCGGTCTCCC +
Preference number: 6 (lower is better)
Translates to: ASCSPRPRGTSRSFS*SSLLPSSRTGIRSP
Trigger: GGGAGACCGAATTCCTGTTCTGCTGCTGGGCAATAAACTTGACAATGAGAAGGAGCGGGAAGTGCCCCGGGGCCTGGGAGAGCAACTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS CAA 90 bp ATCCATGGACGAATGGTGGAGGGCGTGAGGCAGAGGCAAGCTGAGTaGGAAGAGCTGAGGGCCCACGATGTCTCCACAGTAGCCTACCTT +
Preference number: 6 (lower is better)
Translates to: IHGRMVEGVRQRQAE*EELRAHDVSTVAYL
Trigger: AAGGTAGGCTACTGTGGAGACATCGTGGGCCCTCAGCTCTTCCAACTCAGCTTGCCTCTGCCTCACGCCCTCCACCATTCGTCCATGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071563.5
CDS CAA 90 bp TCGGGGAGAGGTAGGGATGAGATCCAAGACTGGGGCTGCCACGCTTaGTCTTTCTGTTCCCTGGTCAGAGACCTCCTCCTCTTCTGGGCA +
Preference number: 6 (lower is better)
Translates to: SGRGRDEIQDWGCHA*SFCSLVRDLLLFWA
Trigger: TGCCCAGAAGAGGAGGAGGTCTCTGACCAGGGAACAGAAAGACAAAGCGTGGCAGCCCCAGTCTTGGATCTCATCCCTACCTCTCCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS TCA 72 bp AGTTGCTCCACGCAGGCTCCACTTCCCTGCTTCCCATaGCCTGGTGTCTGGGAGCTGGAGTCTTCTCTTCCA +
Preference number: 6 (lower is better)
Translates to: SCSTQAPLPCFP*PGVWELESSLP
Trigger: TGGAAGAGAAGACTCCAGCTCCCAGACACCAGGTCATGGGAAGCAGGGAAGTGGAGCCTGCGTGGAGCAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071563.5
ENSMUST00000212051.2
CDS GCA 72 bp CTTTCAGTCACTCGGTACACTTCCATCTCCTTCTCCTaGTGCAGCTCGCAGGCCTCTCTCTGGAGGCTCTCC +
Preference number: 6 (lower is better)
Translates to: LSVTRYTSISFS*CSSQASLWRLS
Trigger: GGAGAGCCTCCAGAGAGAGGCCTGCGAGCTGCAGCAGGAGAAGGAGATGGAAGTGTACCGAGTGACTGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS GCA 72 bp ACGCTGCTGAGCCACTGGCGGATCGACAGGAAGGACTaGTTGGCTGTGAGGTCATACATAACAGCCACACCG +
Preference number: 6 (lower is better)
Translates to: TLLSHWRIDRKD*LAVRSYITATP
Trigger: CGGTGTGGCTGTTATGTATGACCTCACAGCCAAGCAGTCCTTCCTGTCGATCCGCCAGTGGCTCAGCAGCGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS CAA 90 bp CGGGCCAGCTCCTGGTTAGTGAGTCTCAGCTTGCTGTTCTCAGCCTaGGTTTCGTGCTTGTCGTTGTGTAGAGCTGCACACTGGCCTTCC +
Preference number: 6 (lower is better)
Translates to: RASSWLVSLSLLFSA*VSCLSLCRAAHWPS
Trigger: GGAAGGCCAGTGTGCAGCTCTACACAACGACAAGCACGAAACCAAGGCTGAGAACAGCAAGCTGAGACTCACTAACCAGGAGCTGGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS GCA 72 bp TCGGGGAGAGGTAGGGATGAGATCCAAGACTGGGGCTaGCACGCTTTGTCTTTCTGTTCCCTGGTCAGAGAC +
Preference number: 6 (lower is better)
Translates to: SGRGRDEIQDWG*HALSFCSLVRD
Trigger: GTCTCTGACCAGGGAACAGAAAGACAAAGCGTGGCAGCCCCAGTCTTGGATCTCATCCCTACCTCTCCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS CCA 72 bp GAATTCCTGTGCTTTCTTCCACATGGCACTCTGGTCTaGCATCTCCACCTCCAGCTTCTCCGGGTGGTCCAG +
Preference number: 6 (lower is better)
Translates to: EFLCFLPHGTLV*HLHLQLLRVVQ
Trigger: CTGGACCACCCGGAGAAGCTGGAGGTGGAGATGCCAGACCAGAGTGCCATGTGGAAGAAAGCACAGGAATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071563.5
ENSMUST00000212051.2
CDS CAA 72 bp GGTAGGGATGAGATCCAAGACTGGGGCTGCCACGCTTaGTCTTTCTGTTCCCTGGTCAGAGACCTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: GRDEIQDWGCHA*SFCSLVRDLLL
Trigger: GAGGAGGAGGTCTCTGACCAGGGAACAGAAAGACAAAGCGTGGCAGCCCCAGTCTTGGATCTCATCCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS CAA 72 bp TCTCCCAGGCCCCGGGGCACTTCCCGCTCCTTCTCATaGTCAAGTTTATTGCCCAGCAGCAGAACAGGAATT +
Preference number: 6 (lower is better)
Translates to: SPRPRGTSRSFS*SSLLPSSRTGI
Trigger: AATTCCTGTTCTGCTGCTGGGCAATAAACTTGACAATGAGAAGGAGCGGGAAGTGCCCCGGGGCCTGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS CAA 90 bp AATTCCCCTGCCATCCACGTATTTGCCGATCACAGAGCCAGATCTTaGCTTCCTGCTTGCCTTGGAAGCAGCTGTGTTTGCCTTGGCCGC +
Preference number: 6 (lower is better)
Translates to: NSPAIHVFADHRARS*LPACLGSSCVCLGR
Trigger: GCGGCCAAGGCAAACACAGCTGCTTCCAAGGCAAGCAGGAAGCAAAGATCTGGCTCTGTGATCGGCAAATACGTGGATGGCAGGGGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS GCA 72 bp TTTGCCGATCACAGAGCCAGATCTTTGCTTCCTGCTTaGCTTGGAAGCAGCTGTGTTTGCCTTGGCCGCCTT +
Preference number: 6 (lower is better)
Translates to: FADHRARSLLPA*LGSSCVCLGRL
Trigger: AAGGCGGCCAAGGCAAACACAGCTGCTTCCAAGGCAAGCAGGAAGCAAAGATCTGGCTCTGTGATCGGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS GCA 72 bp CGTATTTGCCGATCACAGAGCCAGATCTTTGCTTCCTaGTTGCCTTGGAAGCAGCTGTGTTTGCCTTGGCCG +
Preference number: 6 (lower is better)
Translates to: RICRSQSQIFAS*LPWKQLCLPWP
Trigger: CGGCCAAGGCAAACACAGCTGCTTCCAAGGCAAGCAGGAAGCAAAGATCTGGCTCTGTGATCGGCAAATACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS GCA 72 bp GGGGCACTTCCCGCTCCTTCTCATTGTCAAGTTTATTaGCCAGCAGCAGAACAGGAATTCGGTCTCCCACAG +
Preference number: 6 (lower is better)
Translates to: GALPAPSHCQVY*PAAEQEFGLPQ
Trigger: CTGTGGGAGACCGAATTCCTGTTCTGCTGCTGGGCAATAAACTTGACAATGAGAAGGAGCGGGAAGTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS CAA 72 bp CGGGGCACTTCCCGCTCCTTCTCATTGTCAAGTTTATaGCCCAGCAGCAGAACAGGAATTCGGTCTCCCACA +
Preference number: 6 (lower is better)
Translates to: RGTSRSFSLSSL*PSSRTGIRSPT
Trigger: TGTGGGAGACCGAATTCCTGTTCTGCTGCTGGGCAATAAACTTGACAATGAGAAGGAGCGGGAAGTGCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS CAA 90 bp TCCTCCTCTGACTGGCTCCTGAGAATTCCCCTGCCATCCACGTATTaGCCGATCACAGAGCCAGATCTTTGCTTCCTGCTTGCCTTGGAA +
Preference number: 6 (lower is better)
Translates to: SSSDWLLRIPLPSTY*PITEPDLCFLLALE
Trigger: TTCCAAGGCAAGCAGGAAGCAAAGATCTGGCTCTGTGATCGGCAAATACGTGGATGGCAGGGGAATTCTCAGGAGCCAGTCAGAGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS GCA 72 bp CCATCCACGTATTTGCCGATCACAGAGCCAGATCTTTaGTTCCTGCTTGCCTTGGAAGCAGCTGTGTTTGCC +
Preference number: 6 (lower is better)
Translates to: PSTYLPITEPDL*FLLALEAAVFA
Trigger: GGCAAACACAGCTGCTTCCAAGGCAAGCAGGAAGCAAAGATCTGGCTCTGTGATCGGCAAATACGTGGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS CAA 72 bp GCCATCCACGTATTTGCCGATCACAGAGCCAGATCTTaGCTTCCTGCTTGCCTTGGAAGCAGCTGTGTTTGC +
Preference number: 6 (lower is better)
Translates to: AIHVFADHRARS*LPACLGSSCVC
Trigger: GCAAACACAGCTGCTTCCAAGGCAAGCAGGAAGCAAAGATCTGGCTCTGTGATCGGCAAATACGTGGATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS CAA 90 bp CAGAGCCAGATCTTTGCTTCCTGCTTGCCTTGGAAGCAGCTGTGTTaGCCTTGGCCGCCTTATCTTTCTGGAAAGTTATGTCCCGTTCGT +
Preference number: 6 (lower is better)
Translates to: QSQIFASCLPWKQLC*PWPPYLSGKLCPVR
Trigger: ACGAACGGGACATAACTTTCCAGAAAGATAAGGCGGCCAAGGCAAACACAGCTGCTTCCAAGGCAAGCAGGAAGCAAAGATCTGGCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS TCA 72 bp ATAACAGCCACACCGTCGGCCTTTCTGAAGAACTGCTaGCTGATACAGCGATATCTCTCCTGCCCAGCAGTA +
Preference number: 6 (lower is better)
Translates to: ITATPSAFLKNC*LIQRYLSCPAV
Trigger: TACTGCTGGGCAGGAGAGATATCGCTGTATCAGTCAGCAGTTCTTCAGAAAGGCCGACGGTGTGGCTGTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS GCA 72 bp GCAGGGACTCTTGGGCGTTGTGACCCGAACAGGCACTaGATTCATAGAAGATCAAATTGTTCTCCTTGGCGA +
Preference number: 6 (lower is better)
Translates to: AGTLGRCDPNRH*IHRRSNCSPWR
Trigger: TCGCCAAGGAGAACAATTTGATCTTCTATGAATGCAGTGCCTGTTCGGGTCACAACGCCCAAGAGTCCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS CAA 72 bp TCCTGGTTAGTGAGTCTCAGCTTGCTGTTCTCAGCCTaGGTTTCGTGCTTGTCGTTGTGTAGAGCTGCACAC +
Preference number: 6 (lower is better)
Translates to: SWLVSLSLLFSA*VSCLSLCRAAH
Trigger: GTGTGCAGCTCTACACAACGACAAGCACGAAACCAAGGCTGAGAACAGCAAGCTGAGACTCACTAACCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS CAA 90 bp CTTTCTGAGGGCACATTCCAGTTCGTTCTTCTGCTCATGGGCTTCTaGGAGCTGAGCAAAAATTGTGGTGAGGAGGTCTTCGAAGTTGGA +
Preference number: 6 (lower is better)
Translates to: LSEGTFQFVLLLMGF*ELSKNCGEEVFEVG
Trigger: TCCAACTTCGAAGACCTCCTCACCACAATTTTTGCTCAGCTCCAAGAAGCCCATGAGCAGAAGAACGAACTGGAATGTGCCCTCAGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071563.5
ENSMUST00000212051.2
CDS TCA 72 bp ACATCTTCCAATTCTTCTAGACTTAGGGGCAACTCCTaGTGCAGCCTCTGCATGTCTGTCCTGGCAATGAAG +
Preference number: 6 (lower is better)
Translates to: TSSNSSRLRGNS*CSLCMSVLAMK
Trigger: CTTCATTGCCAGGACAGACATGCAGAGGCTGCATCAGGAGTTGCCCCTAAGTCTAGAAGAATTGGAAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000071563.5
ENSMUST00000212051.2
CDS TCA 72 bp TCCAGTTCGTTCTTCTGCTCATGGGCTTCTTGGAGCTaGGCAAAAATTGTGGTGAGGAGGTCTTCGAAGTTG +
Preference number: 6 (lower is better)
Translates to: SSSFFCSWASWS*AKIVVRRSSKL
Trigger: CAACTTCGAAGACCTCCTCACCACAATTTTTGCTCAGCTCCAAGAAGCCCATGAGCAGAAGAACGAACTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000071563.5
ENSMUST00000212051.2
CDS GCA 72 bp TCTTTGCTTCCTGCTTGCCTTGGAAGCAGCTGTGTTTaGCTTGGCCGCCTTATCTTTCTGGAAAGTTATGTC +
Preference number: 6 (lower is better)
Translates to: SLLPACLGSSCV*LGRLIFLESYV
Trigger: GACATAACTTTCCAGAAAGATAAGGCGGCCAAGGCAAACACAGCTGCTTCCAAGGCAAGCAGGAAGCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS TCA 72 bp AGAACTTTCTGGGCTCCAAGTCTGTCCATCAGCATCTaGAATTGTGCTTCTTCATCATGGTCCATGTCTCCC +
Preference number: 6 (lower is better)
Translates to: RTFWAPSLSISI*NCASSSWSMSP
Trigger: GGGAGACATGGACCATGATGAAGAAGCACAATTTCAGATGCTGATGGACAGACTTGGAGCCCAGAAAGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071563.5
ENSMUST00000212051.2
CDS CAA 72 bp TTTCTGGGCTCCAAGTCTGTCCATCAGCATCTGAAATaGTGCTTCTTCATCATGGTCCATGTCTCCCACATC +
Preference number: 6 (lower is better)
Translates to: FLGSKSVHQHLK*CFFIMVHVSHI
Trigger: GATGTGGGAGACATGGACCATGATGAAGAAGCACAATTTCAGATGCTGATGGACAGACTTGGAGCCCAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000071563.5
ENSMUST00000212051.2
CDS CAA 72 bp TTCTGGAAAGTTATGTCCCGTTCGTCCCGGAGATGTTaGTTCCTTTCCCTTAGGAAATCCAGCTGTTTCAGG +
Preference number: 6 (lower is better)
Translates to: FWKVMSRSSRRC*FLSLRKSSCFR
Trigger: CCTGAAACAGCTGGATTTCCTAAGGGAAAGGAACAAACATCTCCGGGACGAACGGGACATAACTTTCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS CAA 72 bp ATCTTTGCTTCCTGCTTGCCTTGGAAGCAGCTGTGTTaGCCTTGGCCGCCTTATCTTTCTGGAAAGTTATGT +
Preference number: 6 (lower is better)
Translates to: IFASCLPWKQLC*PWPPYLSGKLC
Trigger: ACATAACTTTCCAGAAAGATAAGGCGGCCAAGGCAAACACAGCTGCTTCCAAGGCAAGCAGGAAGCAAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212051.2
CDS TCA 72 bp GCTGGATTTCTTCATCGTAAGCAGCAATTTTCTTTCTaGGGGCACATTCCAGTTCGTTCTTCTGCTCATGGG +
Preference number: 6 (lower is better)
Translates to: AGFLHRKQQFSF*GHIPVRSSAHG
Trigger: CCCATGAGCAGAAGAACGAACTGGAATGTGCCCTCAGAAAGAAAATTGCTGCTTACGATGAAGAAATCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000071563.5
ENSMUST00000212051.2