RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CRACDL (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026090

Ensembl transcript IDs: ENSMUST00000160023.6, ENSMUST00000162875.8

Found 332 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCAACATTCTTGCCACAGCCCCTCTGGCCCGGCACTGAGGCTGTCTaGTGGTCTTCTCCGTTCCCCCTGGTTCCTCTCTCTTCTCGGAGC +
Preference number: 1 (lower is better)
Translates to: ATFLPQPLWPGTEAV*WSSPFPLVPLSSRS
Trigger: GCTCCGAGAAGAGAGAGGAACCAGGGGGAACGGAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGAGGGGCTGTGGCAAGAATGTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
3UTR TCA 90 bp CCTAAACTTCGCAACATTCTTGCCACAGCCCCTCTGGCCCGGCACTaGGGCTGTCTGCTGGTCTTCTCCGTTCCCCCTGGTTCCTCTCTC +
Preference number: 1 (lower is better)
Translates to: PKLRNILATAPLARH*GCLLVFSVPPGSSL
Trigger: GAGAGAGGAACCAGGGGGAACGGAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGAGGGGCTGTGGCAAGAATGTTGCGAAGTTTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
3UTR CCA 90 bp CCTATTAGTAAACAAGAAAGACCACGATGGCCCACGGCAAGACGGTaGCCAGAGGCACTGGCTGATGGCAAGAGGCAGCGCAGACCTGGG +
Preference number: 1 (lower is better)
Translates to: PISKQERPRWPTARR*PEALADGKRQRRPG
Trigger: CCCAGGTCTGCGCTGCCTCTTGCCATCAGCCAGTGCCTCTGGCCACCGTCTTGCCGTGGGCCATCGTGGTCTTTCTTGTTTACTAATAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
3UTR TCA 90 bp CTGATGGCAAGAGGCAGCGCAGACCTGGGACTCGTAGGCTCACGCTaGCATCTCAGCACAGGAATGGCGCCCCTAAACTTCGCAACATTC +
Preference number: 1 (lower is better)
Translates to: LMARGSADLGLVGSR*HLSTGMAPLNFATF
Trigger: GAATGTTGCGAAGTTTAGGGGCGCCATTCCTGTGCTGAGATGTCAGCGTGAGCCTACGAGTCCCAGGTCTGCGCTGCCTCTTGCCATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
3UTR CCA 90 bp TCTGGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCCGTTCCCCCTaGTTCCTCTCTCTTCTCGGAGCACATCAGAAGCCGTTGACAAAA +
Preference number: 1 (lower is better)
Translates to: SGPALRLSAGLLRSP*FLSLLGAHQKPLTK
Trigger: TTTTGTCAACGGCTTCTGATGTGCTCCGAGAAGAGAGAGGAACCAGGGGGAACGGAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
3UTR CCA 90 bp GTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTaGATTGTTAAGTGGGTAGCTGCTCTTGTAAAGGGAATCCCTGCT +
Preference number: 1 (lower is better)
Translates to: VPSSPSRGGWVSSGN*IVKWVAALVKGIPA
Trigger: AGCAGGGATTCCCTTTACAAGAGCAGCTACCCACTTAACAATCCAGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
3UTR CCA 90 bp TTACCACAAACAATCATGCCTATTAGTAAACAAGAAAGACCACGATaGCCCACGGCAAGACGGTGGCCAGAGGCACTGGCTGATGGCAAG +
Preference number: 1 (lower is better)
Translates to: LPQTIMPISKQERPR*PTARRWPEALADGK
Trigger: CTTGCCATCAGCCAGTGCCTCTGGCCACCGTCTTGCCGTGGGCCATCGTGGTCTTTCTTGTTTACTAATAGGCATGATTGTTTGTGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
3UTR CCA 90 bp TTTCACAGTCTGCTTGCCAAGATTTATTGGCAGTTTAAAACTAAGTaGCTCGTCGGTCCAGTGGACCTCCTTCCCCAGCAGCCTGCCAAT +
Preference number: 1 (lower is better)
Translates to: FHSLLAKIYWQFKTK*LVGPVDLLPQQPAN
Trigger: ATTGGCAGGCTGCTGGGGAAGGAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGGCAAGCAGACTGTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
3UTR CCA 90 bp CCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTGGATTGTTAAGTaGGTAGCTGCTCTTGTAAAGGGAATCCCTGCTTTACCACAAACA +
Preference number: 1 (lower is better)
Translates to: PSRGGWVSSGNWIVK*VAALVKGIPALPQT
Trigger: TGTTTGTGGTAAAGCAGGGATTCCCTTTACAAGAGCAGCTACCCACTTAACAATCCAGTTTCCTGAAGAAACCCACCCACCCCGAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
3UTR CCA 90 bp ACAAAAATCAATCGTAAGTTTCACAGTCTGCTTGCCAAGATTTATTaGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCCTT +
Preference number: 1 (lower is better)
Translates to: TKINRKFHSLLAKIY*QFKTKWLVGPVDLL
Trigger: AAGGAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGGCAAGCAGACTGTGAAACTTACGATTGATTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
3UTR-3UTR CCA 90 bp TCTGGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCCGTTCCCCCTGGTTCCTCGGCTCGTCGGTCCAGTaGACCTCCTTCCCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: SGPALRLSAGLLRSPWFLGSSVQ*TSFPSS
Trigger: GCTGCTGGGGAAGGAGGTCCACTGGACCGACGAGCC...GAGGAACCAGGGGGAACGGAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
3UTR-3UTR GCA 90 bp GAGGCACTGGCTGATGGCAAGAGGCAGCGCAGACCTGGGACTCGTAGGCTCACGGGCACTGAGGCTGTCTaGTGGTCTTCTCCGTTCCCC +
Preference number: 2 (lower is better)
Translates to: EALADGKRQRRPGTRRLTGTEAV*WSSPFP
Trigger: GGGGAACGGAGAAGACCAGCAGACAGCCTCAGTGCC...CGTGAGCCTACGAGTCCCAGGTCTGCGCTGCCTCTTGCCATCAGCCAGTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
3UTR-3UTR CCA 90 bp AGGCAGCGCAGACCTGGGACTCGTAGGCTCACGCTGACATCTCAGCACAGGAATGGCTCGTCGGTCCAGTaGACCTCCTTCCCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: RQRRPGTRRLTLTSQHRNGSSVQ*TSFPSS
Trigger: GCTGCTGGGGAAGGAGGTCCACTGGACCGACGAGCC...ATTCCTGTGCTGAGATGTCAGCGTGAGCCTACGAGTCCCAGGTCTGCGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
3UTR-3UTR CCA 90 bp CCTGCCACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTTTGCCACAGCCCCTCTaGCCCGGCACTGAGGCTGTC +
Preference number: 2 (lower is better)
Translates to: PATSLPLLLGVGGFLQETLPQPL*PGTEAV
Trigger: GACAGCCTCAGTGCCGGGCCAGAGGGGCTGTGGCAA...AGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
3UTR-3UTR GCA 90 bp AGGCAGCGCAGACCTGGGACTCGTAGGCTCACGCTGACATCTCAGCACAGGAATACTTCGCAACATTCTTaGCACAGCCCCTCTGGCCCG +
Preference number: 2 (lower is better)
Translates to: RQRRPGTRRLTLTSQHRNTSQHS*HSPSGP
Trigger: CGGGCCAGAGGGGCTGTGGCAAGAATGTTGCGAAGT...ATTCCTGTGCTGAGATGTCAGCGTGAGCCTACGAGTCCCAGGTCTGCGCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
3UTR-3UTR GCA 90 bp TCTGGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCCGTTCCCCCTGGTTCCTCGTAAGTTTCACAGTCTaGTTGCCAAGATTTATTGGC +
Preference number: 2 (lower is better)
Translates to: SGPALRLSAGLLRSPWFLVSFTV*LPRFIG
Trigger: GCCAATAAATCTTGGCAAGCAGACTGTGAAACTTAC...GAGGAACCAGGGGGAACGGAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
3UTR-3UTR GCA 90 bp CATTCTTGCCACAGCCCCTCTGGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCGTTTCACAGTCTGCTTaGCAAGATTTATTGGCAGTT +
Preference number: 2 (lower is better)
Translates to: HSCHSPSGPALRLSAGLLVSQSA*QDLLAV
Trigger: AACTGCCAATAAATCTTGGCAAGCAGACTGTGAAAC...GAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGAGGGGCTGTGGCAAGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
3UTR-3UTR GCA 90 bp CACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTGGATTGTAAGTTTCACAGTCTaGTTGCCAAGATTTATTGGC +
Preference number: 2 (lower is better)
Translates to: HVPSSPSRGGWVSSGNWIVSFTV*LPRFIG
Trigger: GCCAATAAATCTTGGCAAGCAGACTGTGAAACTTAC...AATCCAGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
3UTR-3UTR CCA 90 bp CCTGCCACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTCTTGCCAAGATTTATTaGCAGTTTAAAACTAAGTGG +
Preference number: 2 (lower is better)
Translates to: PATSLPLLLGVGGFLQETLAKIY*QFKTKW
Trigger: CCACTTAGTTTTAAACTGCCAATAAATCTTGGCAAG...AGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
3UTR-3UTR CCA 90 bp AAACAATCATGCCTATTAGTAAACAAGAAAGACCACGATGGCCCACGGCAAGACCTTCTCCGTTCCCCCTaGTTCCTCTCTCTTCTCGGA +
Preference number: 2 (lower is better)
Translates to: KQSCLLVNKKDHDGPRQDLLRSP*FLSLLG
Trigger: TCCGAGAAGAGAGAGGAACCAGGGGGAACGGAGAAG...GTCTTGCCGTGGGCCATCGTGGTCTTTCTTGTTTACTAATAGGCATGATTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
3UTR CAA 90 bp CGTTCCCCCTGGTTCCTCTCTCTTCTCGGAGCACATCAGAAGCCGTaGACAAAAATCAATCGTAAGTTTCACAGTCTGCTTGCCAAGATT +
Preference number: 2 (lower is better)
Translates to: RSPWFLSLLGAHQKP*TKINRKFHSLLAKI
Trigger: AATCTTGGCAAGCAGACTGTGAAACTTACGATTGATTTTTGTCAACGGCTTCTGATGTGCTCCGAGAAGAGAGAGGAACCAGGGGGAACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
3UTR-3UTR CCA 90 bp CACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTGGATTCTTGCCAAGATTTATTaGCAGTTTAAAACTAAGTGG +
Preference number: 2 (lower is better)
Translates to: HVPSSPSRGGWVSSGNWILAKIY*QFKTKW
Trigger: CCACTTAGTTTTAAACTGCCAATAAATCTTGGCAAG...AATCCAGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
3UTR CCA 72 bp CACGATGGCCCACGGCAAGACGGTGGCCAGAGGCACTaGCTGATGGCAAGAGGCAGCGCAGACCTGGGACTC +
Preference number: 3 (lower is better)
Translates to: HDGPRQDGGQRH*LMARGSADLGL
Trigger: GAGTCCCAGGTCTGCGCTGCCTCTTGCCATCAGCCAGTGCCTCTGGCCACCGTCTTGCCGTGGGCCATCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
3UTR TCA 72 bp CGCAACATTCTTGCCACAGCCCCTCTGGCCCGGCACTaGGGCTGTCTGCTGGTCTTCTCCGTTCCCCCTGGT +
Preference number: 3 (lower is better)
Translates to: RNILATAPLARH*GCLLVFSVPPG
Trigger: ACCAGGGGGAACGGAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGAGGGGCTGTGGCAAGAATGTTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
3UTR GCA 72 bp TTGCCACAGCCCCTCTGGCCCGGCACTGAGGCTGTCTaGTGGTCTTCTCCGTTCCCCCTGGTTCCTCTCTCT +
Preference number: 3 (lower is better)
Translates to: LPQPLWPGTEAV*WSSPFPLVPLS
Trigger: AGAGAGAGGAACCAGGGGGAACGGAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGAGGGGCTGTGGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
3UTR CCA 72 bp CCCCTAAACTTCGCAACATTCTTGCCACAGCCCCTCTaGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCCG +
Preference number: 3 (lower is better)
Translates to: PLNFATFLPQPL*PGTEAVCWSSP
Trigger: CGGAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGAGGGGCTGTGGCAAGAATGTTGCGAAGTTTAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
3UTR CCA 72 bp AAACAAGAAAGACCACGATGGCCCACGGCAAGACGGTaGCCAGAGGCACTGGCTGATGGCAAGAGGCAGCGC +
Preference number: 3 (lower is better)
Translates to: KQERPRWPTARR*PEALADGKRQR
Trigger: GCGCTGCCTCTTGCCATCAGCCAGTGCCTCTGGCCACCGTCTTGCCGTGGGCCATCGTGGTCTTTCTTGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
3UTR TCA 72 bp AGAGGCAGCGCAGACCTGGGACTCGTAGGCTCACGCTaGCATCTCAGCACAGGAATGGCGCCCCTAAACTTC +
Preference number: 3 (lower is better)
Translates to: RGSADLGLVGSR*HLSTGMAPLNF
Trigger: GAAGTTTAGGGGCGCCATTCCTGTGCTGAGATGTCAGCGTGAGCCTACGAGTCCCAGGTCTGCGCTGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
3UTR CCA 72 bp CCCTGCCACGTCCCTTCCTCTCCTTCTCGGGGTGGGTaGGTTTCTTCAGGAAACTGGATTGTTAAGTGGGTA +
Preference number: 3 (lower is better)
Translates to: PCHVPSSPSRGG*VSSGNWIVKWV
Trigger: TACCCACTTAACAATCCAGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTGGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
3UTR CCA 72 bp TCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTaGATTGTTAAGTGGGTAGCTGCTCTTGTAAAGGGA +
Preference number: 3 (lower is better)
Translates to: SPSRGGWVSSGN*IVKWVAALVKG
Trigger: TCCCTTTACAAGAGCAGCTACCCACTTAACAATCCAGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CATTCTTGCCACAGCCCCTCTGGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCCAGCAGGGACATCTCTaGGGGGCTGCGGGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: HSCHSPSGPALRLSAGLLQQGHL*GAAGQS
Trigger: GGACTGCCCCGCAGCCCCCCAGAGATGTCCCTGCTG...GAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGAGGGGCTGTGGCAAGAATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp ACGGCAAGACGGTGGCCAGAGGCACTGGCTGATGGCAAGAGGCAGCGCAGACCTACTGGGAAGGGGCTCTaGTCCTCCCCATTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TARRWPEALADGKRQRRPTGKGL*SSPLAG
Trigger: GCCAGCCAATGGGGAGGACCAGAGCCCCTTCCCAGT...AGGTCTGCGCTGCCTCTTGCCATCAGCCAGTGCCTCTGGCCACCGTCTTGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp GAGGCACTGGCTGATGGCAAGAGGCAGCGCAGACCTGGGACTCGTAGGCTCACGCTTCCTGGGCAGGGGTaGCTTGGTACCTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: EALADGKRQRRPGTRRLTLPGQG*LGTWLL
Trigger: GAGCAGCCAGGTACCAAGCCACCCCTGCCCAGGAAG...CGTGAGCCTACGAGTCCCAGGTCTGCGCTGCCTCTTGCCATCAGCCAGTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp TCTGGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCCGTTCCCCCTGGTTCCTCCTTCCTGGGCAGGGGTaGCTTGGTACCTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SGPALRLSAGLLRSPWFLLPGQG*LGTWLL
Trigger: GAGCAGCCAGGTACCAAGCCACCCCTGCCCAGGAAG...GAGGAACCAGGGGGAACGGAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR GCA 90 bp AGGCAGCGCAGACCTGGGACTCGTAGGCTCACGCTGACATCTCAGCACAGGAATCCTGGAGCCTCGCAGTaGAGGAGCTGCCCCGACGTG +
Preference number: 4 (lower is better)
Translates to: RQRRPGTRRLTLTSQHRNPGASQ*RSCPDV
Trigger: CACGTCGGGGCAGCTCCTGCACTGCGAGGCTCCAGG...ATTCCTGTGCTGAGATGTCAGCGTGAGCCTACGAGTCCCAGGTCTGCGCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR GCA 90 bp CCTGCCACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTCCTGGAGCCTCGCAGTaGAGGAGCTGCCCCGACGTG +
Preference number: 4 (lower is better)
Translates to: PATSLPLLLGVGGFLQETPGASQ*RSCPDV
Trigger: CACGTCGGGGCAGCTCCTGCACTGCGAGGCTCCAGG...AGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp ACGGCAAGACGGTGGCCAGAGGCACTGGCTGATGGCAAGAGGCAGCGCAGACCTCACAGAGGAGGCACATaGCTCAGCTTCCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: TARRWPEALADGKRQRRPHRGGT*LSFLGA
Trigger: AGCCCCCAGGAAGCTGAGCCATGTGCCTCCTCTGTG...AGGTCTGCGCTGCCTCTTGCCATCAGCCAGTGCCTCTGGCCACCGTCTTGCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CATTCTTGCCACAGCCCCTCTGGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCGTCCTCCCCATTGGCTaGCTCCTGCACAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: HSCHSPSGPALRLSAGLLVLPIG*LLHRGG
Trigger: GCCTCCTCTGTGCAGGAGCCAGCCAATGGGGAGGAC...GAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGAGGGGCTGTGGCAAGAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp ACGGCAAGACGGTGGCCAGAGGCACTGGCTGATGGCAAGAGGCAGCGCAGACCTGGGTGGCTTGGTACCTaGCTGCTCAGGAGACCTGGT +
Preference number: 4 (lower is better)
Translates to: TARRWPEALADGKRQRRPGWLGT*LLRRPG
Trigger: ACCAGGTCTCCTGAGCAGCCAGGTACCAAGCCACCC...AGGTCTGCGCTGCCTCTTGCCATCAGCCAGTGCCTCTGGCCACCGTCTTGCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp GAGGCACTGGCTGATGGCAAGAGGCAGCGCAGACCTGGGACTCGTAGGCTCACGGCAGAAGTGGCTTCCTaGGCAGGGGTGGCTTGGTAC +
Preference number: 4 (lower is better)
Translates to: EALADGKRQRRPGTRRLTAEVAS*AGVAWY
Trigger: GTACCAAGCCACCCCTGCCCAGGAAGCCACTTCTGC...CGTGAGCCTACGAGTCCCAGGTCTGCGCTGCCTCTTGCCATCAGCCAGTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CATTCTTGCCACAGCCCCTCTGGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCCAGACTCCCCAGGGCTaGTATCCAGGCCTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: HSCHSPSGPALRLSAGLLQTPQG*YPGLWV
Trigger: CACCCACAGGCCTGGATACCAGCCCTGGGGAGTCTG...GAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGAGGGGCTGTGGCAAGAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp ACGGCAAGACGGTGGCCAGAGGCACTGGCTGATGGCAAGAGGCAGCGCAGACCTCATGGTGATCCAGGGTaGGGTGGGTTGCCCATCAGC +
Preference number: 4 (lower is better)
Translates to: TARRWPEALADGKRQRRPHGDPG*GGLPIS
Trigger: GCTGATGGGCAACCCACCCCACCCTGGATCACCATG...AGGTCTGCGCTGCCTCTTGCCATCAGCCAGTGCCTCTGGCCACCGTCTTGCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR TCA 90 bp TCTGGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCCGTTCCCCCTGGTTCCTCTCTCTGGGGGTGCCATaGTCTTCTTGGGAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: SGPALRLSAGLLRSPWFLSLGVP*SSWEVP
Trigger: TGGCACCTCCCAAGAAGATCATGGCACCCCCAGAGA...GAGGAACCAGGGGGAACGGAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR TCA 90 bp TCTGGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCCGTTCCCCCTGGTTCCTCCCGCCTCAGTTTACTTaGTCGCTGGTTGCGGGGCTT +
Preference number: 4 (lower is better)
Translates to: SGPALRLSAGLLRSPWFLPPQFT*SLVAGL
Trigger: AAGCCCCGCAACCAGCGATCAAGTAAACTGAGGCGG...GAGGAACCAGGGGGAACGGAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR TCA 90 bp TCTGGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCCGTTCCCCCTGGTTCCTCCCTCCATGCTGGCACTaGCTGCCATGCTGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: SGPALRLSAGLLRSPWFLPPCWH*LPCCAV
Trigger: TACAGCACAGCATGGCAGTCAGTGCCAGCATGGAGG...GAGGAACCAGGGGGAACGGAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CATTCTTGCCACAGCCCCTCTGGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCGCTTCAGGCAGCTCTTaGGTACTGGAGGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: HSCHSPSGPALRLSAGLLASGSS*VLEGLG
Trigger: CCCCAAGCCCTCCAGTACCCAAGAGCTGCCTGAAGC...GAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGAGGGGCTGTGGCAAGAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CATTCTTGCCACAGCCCCTCTGGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCCACAGAGGAGGCACATaGCTCAGCTTCCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: HSCHSPSGPALRLSAGLLHRGGT*LSFLGA
Trigger: AGCCCCCAGGAAGCTGAGCCATGTGCCTCCTCTGTG...GAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGAGGGGCTGTGGCAAGAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR TCA 90 bp CATTCTTGCCACAGCCCCTCTGGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCTCTCTCTGGACCTCCTaGGGTTGCAGCCTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: HSCHSPSGPALRLSAGLLSLWTS*GCSLCR
Trigger: CCTACACAGGCTGCAACCTCAGGAGGTCCAGAGAGA...GAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGAGGGGCTGTGGCAAGAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR GCA 90 bp GGCACTGAGGCTGTCTGCTGGTCTTCTCCGTTCCCCCTGGTTCCTCTCTCTTCTGCTGACACGGGCACGTaGCCTGCTGGAGGTCACAGA +
Preference number: 4 (lower is better)
Translates to: GTEAVCWSSPFPLVPLSSADTGT*PAGGHR
Trigger: TCTGTGACCTCCAGCAGGGCACGTGCCCGTGTCAGC...AGAAGAGAGAGGAACCAGGGGGAACGGAGAAGACCAGCAGACAGCCTCAGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR GCA 90 bp GAGGCACTGGCTGATGGCAAGAGGCAGCGCAGACCTGGGACTCGTAGGCTCACGTTCAGTTTTGACCCCTaGCTCTGGGTCACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: EALADGKRQRRPGTRRLTFSFDP*LWVTAG
Trigger: GCCTGCTGTGACCCAGAGGCAGGGGTCAAAACTGAA...CGTGAGCCTACGAGTCCCAGGTCTGCGCTGCCTCTTGCCATCAGCCAGTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR GCA 90 bp CATTCTTGCCACAGCCCCTCTGGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCCGCTGCAGCCTGAGCTaGCAAGTTCTGATGGGACAG +
Preference number: 4 (lower is better)
Translates to: HSCHSPSGPALRLSAGLLRCSLS*QVLMGQ
Trigger: CTGTCCCATCAGAACTTGGCAGCTCAGGCTGCAGCG...GAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGAGGGGCTGTGGCAAGAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000160023.6
CDS-3UTR CCA 90 bp AGGCAGCGCAGACCTGGGACTCGTAGGCTCACGCTGACATCTCAGCACAGGAATGGGTACTGGAGGGCTTaGGGCAGGGGCTGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: RQRRPGTRRLTLTSQHRNGYWRA*GRGCGR
Trigger: TCTTCCACAGCCCCTGCCCCAAGCCCTCCAGTACCC...ATTCCTGTGCTGAGATGTCAGCGTGAGCCTACGAGTCCCAGGTCTGCGCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp AGGCAGCGCAGACCTGGGACTCGTAGGCTCACGCTGACATCTCAGCACAGGAATACTGGGAAGGGGCTCTaGTCCTCCCCATTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RQRRPGTRRLTLTSQHRNTGKGL*SSPLAG
Trigger: GCCAGCCAATGGGGAGGACCAGAGCCCCTTCCCAGT...ATTCCTGTGCTGAGATGTCAGCGTGAGCCTACGAGTCCCAGGTCTGCGCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp GGCACTGAGGCTGTCTGCTGGTCTTCTCCGTTCCCCCTGGTTCCTCTCTCTTCTGGACCGCAGCTTGACTaGGAAGGGGCTCTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: GTEAVCWSSPFPLVPLSSGPQLD*EGALVL
Trigger: GAGGACCAGAGCCCCTTCCCAGTCAAGCTGCGGTCC...AGAAGAGAGAGGAACCAGGGGGAACGGAGAAGACCAGCAGACAGCCTCAGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp TCTGGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCCGTTCCCCCTGGTTCCTCGGCTCTGTTCATCTTTaGGAAGCAGAGCCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: SGPALRLSAGLLRSPWFLGSVHL*EAEPGL
Trigger: GAGGCCTGGCTCTGCTTCCCAAAGATGAACAGAGCC...GAGGAACCAGGGGGAACGGAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CCTGCCACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTAAGGCTCGGCAGAAGTaGCTTCCTGGGCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PATSLPLLLGVGGFLQETKARQK*LPGQGW
Trigger: CCACCCCTGCCCAGGAAGCCACTTCTGCCGAGCCTT...AGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp GGCACTGAGGCTGTCTGCTGGTCTTCTCCGTTCCCCCTGGTTCCTCTCTCTTCTCAGACTCCCCAGGGCTaGTATCCAGGCCTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GTEAVCWSSPFPLVPLSSQTPQG*YPGLWV
Trigger: CACCCACAGGCCTGGATACCAGCCCTGGGGAGTCTG...AGAAGAGAGAGGAACCAGGGGGAACGGAGAAGACCAGCAGACAGCCTCAGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR TCA 90 bp CCTGCCACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTTCTCTGGGGGTGCCATaGTCCTCTTGGGAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: PATSLPLLLGVGGFLQETSLGVP*SSWEVP
Trigger: TGGCACCTCCCAAGAGGATCATGGCACCCCCAGAGA...AGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTGGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR GCA 90 bp CATTCTTGCCACAGCCCCTCTGGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCGATCTTCTTGGGAGGTaGCACATCTCCTTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: HSCHSPSGPALRLSAGLLDLLGR*HISFGR
Trigger: CCTCCCGAAGGAGATGTGGCACCTCCCAAGAAGATC...GAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGAGGGGCTGTGGCAAGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR GCA 90 bp GGCACTGAGGCTGTCTGCTGGTCTTCTCCGTTCCCCCTGGTTCCTCTCTCTTCTGTCCCTCTCTGGGGGTaGCATGATCCTCTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GTEAVCWSSPFPLVPLSSVPLWG*HDPLGR
Trigger: CCTCCCAAGAGGATCATGGCACCCCCAGAGAGGGAC...AGAAGAGAGAGGAACCAGGGGGAACGGAGAAGACCAGCAGACAGCCTCAGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR GCA 90 bp CCTGCCACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTGTCCCTCTCTGGGGGTaGCATGATCCTCTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PATSLPLLLGVGGFLQETVPLWG*HDPLGR
Trigger: CCTCCCAAGAGGATCATGGCACCCCCAGAGAGGGAC...AGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTGGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR GCA 90 bp CATTCTTGCCACAGCCCCTCTGGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCCATCCTCAGAACTCATaGCGGTTTCCTCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: HSCHSPSGPALRLSAGLLHPQNS*RFPLPA
Trigger: AGCGGGCAGAGGAAACCGGCATGAGTTCTGAGGATG...GAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGAGGGGCTGTGGCAAGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp AGGCAGCGCAGACCTGGGACTCGTAGGCTCACGCTGACATCTCAGCACAGGAATGCTTCAGGCAGCTCTTaGGTACTGGAGGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: RQRRPGTRRLTLTSQHRNASGSS*VLEGLG
Trigger: CCCCAAGCCCTCCAGTACCCAAGAGCTGCCTGAAGC...ATTCCTGTGCTGAGATGTCAGCGTGAGCCTACGAGTCCCAGGTCTGCGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp TCTGGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCCGTTCCCCCTGGTTCCTCACAACTGCTTTGTCTTaGACTGCTGGGCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: SGPALRLSAGLLRSPWFLTTALS*TAGPGS
Trigger: AGAGCCTGGCCCAGCAGTCCAAGACAAAGCAGTTGT...GAGGAACCAGGGGGAACGGAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CATTCTTGCCACAGCCCCTCTGGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCTTTGACCCCTGCCTCTaGGTCACAGCAGGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: HSCHSPSGPALRLSAGLLFDPCL*VTAGFA
Trigger: TGCAAAGCCTGCTGTGACCCAGAGGCAGGGGTCAAA...GAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGAGGGGCTGTGGCAAGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CCTGCCACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTGATAGGAAGGCCTCCTaGAGGCGGTGGCCCCATCTT +
Preference number: 4 (lower is better)
Translates to: PATSLPLLLGVGGFLQETDRKAS*RRWPHL
Trigger: AAGATGGGGCCACCGCCTCCAGGAGGCCTTCCTATC...AGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR TCA 90 bp GGCACTGAGGCTGTCTGCTGGTCTTCTCCGTTCCCCCTGGTTCCTCTCTCTTCTTCTCTGGGGGTGCCATaGTCTTCTTGGGAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: GTEAVCWSSPFPLVPLSSSLGVP*SSWEVP
Trigger: TGGCACCTCCCAAGAAGATCATGGCACCCCCAGAGA...AGAAGAGAGAGGAACCAGGGGGAACGGAGAAGACCAGCAGACAGCCTCAGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR TCA 90 bp TCTGGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCCGTTCCCCCTGGTTCCTCATGTCGCTCCAGGCTTaGGATTTCTTTCTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: SGPALRLSAGLLRSPWFLMSLQA*DFFLAS
Trigger: ACTCGCCAGAAAGAAATCTCAAGCCTGGAGCGACAT...GAGGAACCAGGGGGAACGGAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR GCA 90 bp CACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTGGATTGCTGACACGGGCACGTaGCCTGCTGGAGGTCACAGA +
Preference number: 4 (lower is better)
Translates to: HVPSSPSRGGWVSSGNWIADTGT*PAGGHR
Trigger: TCTGTGACCTCCAGCAGGGCACGTGCCCGTGTCAGC...AATCCAGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR GCA 90 bp GGCACTGAGGCTGTCTGCTGGTCTTCTCCGTTCCCCCTGGTTCCTCTCTCTTCTCGGACGAAGTCACCCTaGTTCACAGACTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GTEAVCWSSPFPLVPLSSRTKSP*FTDSWA
Trigger: AGCCCAGGAGTCTGTGAAGCAGGGTGACTTCGTCCG...AGAAGAGAGAGGAACCAGGGGGAACGGAGAAGACCAGCAGACAGCCTCAGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR GCA 90 bp CCTGCCACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTCGGACGAAGTCACCCTaGTTCACAGACTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PATSLPLLLGVGGFLQETRTKSP*FTDSWA
Trigger: AGCCCAGGAGTCTGTGAAGCAGGGTGACTTCGTCCG...AGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR GCA 90 bp GGCACTGAGGCTGTCTGCTGGTCTTCTCCGTTCCCCCTGGTTCCTCTCTCTTCTGTCTCTCTCTGGGGGTaGCATGATCCTCTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GTEAVCWSSPFPLVPLSSVSLWG*HDPLGR
Trigger: CCTCCCAAGAGGATCATGGCACCCCCAGAGAGAGAC...AGAAGAGAGAGGAACCAGGGGGAACGGAGAAGACCAGCAGACAGCCTCAGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp TTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCCTTCCCCTTGCCCGGTCCTGCCTaGCCGGCCCCCACATCCCCT +
Preference number: 4 (lower is better)
Translates to: FIGSLKLSGSSVQWTSFPLPGPA*PAPTSP
Trigger: AGGGGATGTGGGGGCCGGCCAGGCAGGACCGGGCAA...GGGGAAGGAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp TCTGGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCCGTTCCCCCTGGTTCCTCGAGTTCCATCCAGGATaGCTGATCTGTACTGGCGTA +
Preference number: 4 (lower is better)
Translates to: SGPALRLSAGLLRSPWFLEFHPG*LICTGV
Trigger: TACGCCAGTACAGATCAGCCATCCTGGATGGAACTC...GAGGAACCAGGGGGAACGGAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp ACGGCAAGACGGTGGCCAGAGGCACTGGCTGATGGCAAGAGGCAGCGCAGACCTGAGTTCCATCCAGGATaGCTGATCTGTACTGGCGTA +
Preference number: 4 (lower is better)
Translates to: TARRWPEALADGKRQRRPEFHPG*LICTGV
Trigger: TACGCCAGTACAGATCAGCCATCCTGGATGGAACTC...AGGTCTGCGCTGCCTCTTGCCATCAGCCAGTGCCTCTGGCCACCGTCTTGCCGT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CCTGCCACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTAAGAAAATACTGTCGTaGGAGAGGGCCCGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PATSLPLLLGVGGFLQETKKILS*ERARLP
Trigger: GGGCAGCCGGGCCCTCTCCCACGACAGTATTTTCTT...AGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp ACGGCAAGACGGTGGCCAGAGGCACTGGCTGATGGCAAGAGGCAGCGCAGACCTCTTTATAGTTGTGCCTaGACCCACATCGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TARRWPEALADGKRQRRPLYSCA*THIVQQ
Trigger: CTGCTGCACGATGTGGGTCCAGGCACAACTATAAAG...AGGTCTGCGCTGCCTCTTGCCATCAGCCAGTGCCTCTGGCCACCGTCTTGCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR TCA 90 bp TCTGGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCCGTTCCCCCTGGTTCCTCCCCTTTTCAGCTCCCTaGTTGGACAATTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SGPALRLSAGLLRSPWFLPFSAP*LDNFSF
Trigger: GAAGGAGAAATTGTCCAATCAGGGAGCTGAAAAGGG...GAGGAACCAGGGGGAACGGAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR TCA 90 bp CACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTGGATTGTTTCTCTTCCTGGTTaGCGGGCAGGTCTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: HVPSSPSRGGWVSSGNWIVSLPG*RAGLGL
Trigger: GAGCCCCAGACCTGCCCGTCAACCAGGAAGAGAAAC...AATCCAGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR GCA 90 bp AGGCAGCGCAGACCTGGGACTCGTAGGCTCACGCTGACATCTCAGCACAGGAATTTTCAGAGGAGACTCTaGAGGGGACCCACTGGTGAC +
Preference number: 4 (lower is better)
Translates to: RQRRPGTRRLTLTSQHRNFQRRL*RGPTGD
Trigger: GTCACCAGTGGGTCCCCTGCAGAGTCTCCTCTGAAA...ATTCCTGTGCTGAGATGTCAGCGTGAGCCTACGAGTCCCAGGTCTGCGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR GCA 90 bp CCTGCCACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTTTTCAGAGGAGACTCTaGAGGGGACCCACTGGTGAC +
Preference number: 4 (lower is better)
Translates to: PATSLPLLLGVGGFLQETFQRRL*RGPTGD
Trigger: GTCACCAGTGGGTCCCCTGCAGAGTCTCCTCTGAAA...AGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR GCA 90 bp CCTGCCACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTTTCAGTTTTGACCCCTaGCTCTGGGTCACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: PATSLPLLLGVGGFLQETFSFDP*LWVTAG
Trigger: GCCTGCTGTGACCCAGAGGCAGGGGTCAAAACTGAA...AGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR GCA 90 bp ACGGCAAGACGGTGGCCAGAGGCACTGGCTGATGGCAAGAGGCAGCGCAGACCTGAGTTTGTGTTTAGCTaGAGAGTTGTCCAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: TARRWPEALADGKRQRRPEFVFS*RVVQAG
Trigger: TCCTGCCTGGACAACTCTGCAGCTAAACACAAACTC...AGGTCTGCGCTGCCTCTTGCCATCAGCCAGTGCCTCTGGCCACCGTCTTGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCCTTGCCCGGTCCTGCCTaGCCGGCCCCCACATCCCCT +
Preference number: 4 (lower is better)
Translates to: PRFIGSLKLSGSSVQWTSLPGPA*PAPTSP
Trigger: AGGGGATGTGGGGGCCGGCCAGGCAGGACCGGGCAA...GGAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTGGATTTCTGGTCCTCCCCATTaGCTGGCTCCTGCACAGAGG +
Preference number: 4 (lower is better)
Translates to: HVPSSPSRGGWVSSGNWISGPPH*LAPAQR
Trigger: CCTCTGTGCAGGAGCCAGCCAATGGGGAGGACCAGA...AATCCAGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR TCA 90 bp AGGCAGCGCAGACCTGGGACTCGTAGGCTCACGCTGACATCTCAGCACAGGAATCGTAGCTGGAAGGCTTaGGGGTTCATCTCTAGGACA +
Preference number: 4 (lower is better)
Translates to: RQRRPGTRRLTLTSQHRNRSWKA*GFISRT
Trigger: TGTCCTAGAGATGAACCCTCAAGCCTTCCAGCTACG...ATTCCTGTGCTGAGATGTCAGCGTGAGCCTACGAGTCCCAGGTCTGCGCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR GCA 90 bp AGGCAGCGCAGACCTGGGACTCGTAGGCTCACGCTGACATCTCAGCACAGGAATTACTTGATCGCTGGTTaGGGGGCTTCACCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: RQRRPGTRRLTLTSQHRNYLIAG*GASPGV
Trigger: AACTCCTGGTGAAGCCCCGCAACCAGCGATCAAGTA...ATTCCTGTGCTGAGATGTCAGCGTGAGCCTACGAGTCCCAGGTCTGCGCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp GGCACTGAGGCTGTCTGCTGGTCTTCTCCGTTCCCCCTGGTTCCTCTCTCTTCTTTTGTCTTGGACTGCTaGGCCAGGCTCTTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: GTEAVCWSSPFPLVPLSSFVLDC*ARLFQR
Trigger: CCTCTGAAAGAGCCTGGCCCAGCAGTCCAAGACAAA...AGAAGAGAGAGGAACCAGGGGGAACGGAGAAGACCAGCAGACAGCCTCAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CCTGCCACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTTTTGTCTTGGACTGCTaGGCCAGGCTCTTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: PATSLPLLLGVGGFLQETFVLDC*ARLFQR
Trigger: CCTCTGAAAGAGCCTGGCCCAGCAGTCCAAGACAAA...AGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp TCTGGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCCGTTCCCCCTGGTTCCTCCTTGAGATTTCTTTCTaGCGAGTTCCATCCAGGATG +
Preference number: 4 (lower is better)
Translates to: SGPALRLSAGLLRSPWFLLEISF*RVPSRM
Trigger: CATCCTGGATGGAACTCGCCAGAAAGAAATCTCAAG...GAGGAACCAGGGGGAACGGAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp AGGCAGCGCAGACCTGGGACTCGTAGGCTCACGCTGACATCTCAGCACAGGAATAGTTTACTTGATCGCTaGTTGCGGGGCTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: RQRRPGTRRLTLTSQHRNSLLDR*LRGFTR
Trigger: CCTGGTGAAGCCCCGCAACCAGCGATCAAGTAAACT...ATTCCTGTGCTGAGATGTCAGCGTGAGCCTACGAGTCCCAGGTCTGCGCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR GCA 90 bp CACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTGGATTGATCTTCTTGGGAGGTaGCACATCTCCTTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: HVPSSPSRGGWVSSGNWIDLLGR*HISFGR
Trigger: CCTCCCGAAGGAGATGTGGCACCTCCCAAGAAGATC...AATCCAGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR GCA 90 bp GAGGCACTGGCTGATGGCAAGAGGCAGCGCAGACCTGGGACTCGTAGGCTCACGCATTGTATCTTTAACTaGAAAGCCTTGATCCGGTCG +
Preference number: 4 (lower is better)
Translates to: EALADGKRQRRPGTRRLTHCIFN*KALIRS
Trigger: CGACCGGATCAAGGCTTTGCAGTTAAAGATACAATG...CGTGAGCCTACGAGTCCCAGGTCTGCGCTGCCTCTTGCCATCAGCCAGTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp AGGCAGCGCAGACCTGGGACTCGTAGGCTCACGCTGACATCTCAGCACAGGAATAGCTCCTCTTCCTTCTaGACACTTTGGTCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: RQRRPGTRRLTLTSQHRNSSSSF*TLWSCL
Trigger: GAGACAGGACCAAAGTGTCCAGAAGGAAGAGGAGCT...ATTCCTGTGCTGAGATGTCAGCGTGAGCCTACGAGTCCCAGGTCTGCGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTGGATTTGTCTTCCGGTCCTGTaGCTTTGGCAGCACCTGAAG +
Preference number: 4 (lower is better)
Translates to: HVPSSPSRGGWVSSGNWICLPVL*LWQHLK
Trigger: CTTCAGGTGCTGCCAAAGCCACAGGACCGGAAGACA...AATCCAGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp AGGCAGCGCAGACCTGGGACTCGTAGGCTCACGCTGACATCTCAGCACAGGAATATGGCTTTGGCCTCTTaGGCAGAGCTGTCTCTGTAT +
Preference number: 4 (lower is better)
Translates to: RQRRPGTRRLTLTSQHRNMALAS*AELSLY
Trigger: ATACAGAGACAGCTCTGCCCAAGAGGCCAAAGCCAT...ATTCCTGTGCTGAGATGTCAGCGTGAGCCTACGAGTCCCAGGTCTGCGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CATTCTTGCCACAGCCCCTCTGGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCTTTCAGCTCCCTGATTaGACAATTTCTCCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: HSCHSPSGPALRLSAGLLFQLPD*TISPSW
Trigger: CCAGGAAGGAGAAATTGTCCAATCAGGGAGCTGAAA...GAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGAGGGGCTGTGGCAAGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTGGATTCTCTCTCGGCCACCTTaGCTTGCTTCCCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: HVPSSPSRGGWVSSGNWILSRPP*LASQFL
Trigger: CAGAAACTGGGAAGCAAGCCAAGGTGGCCGAGAGAG...AATCCAGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CCTGCCACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTATGGCTGATCTGTACTaGCGTAACTGGCCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: PATSLPLLLGVGGFLQETMADLY*RNWPSS
Trigger: TGAAGAGGGCCAGTTACGCCAGTACAGATCAGCCAT...AGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp AGGCAGCGCAGACCTGGGACTCGTAGGCTCACGCTGACATCTCAGCACAGGAATGCAGGAAGAGAATTCTaGAGGGTGGCTGAAGTCAAC +
Preference number: 4 (lower is better)
Translates to: RQRRPGTRRLTLTSQHRNAGREF*RVAEVN
Trigger: GTTGACTTCAGCCACCCTCCAGAATTCTCTTCCTGC...ATTCCTGTGCTGAGATGTCAGCGTGAGCCTACGAGTCCCAGGTCTGCGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp AGGCAGCGCAGACCTGGGACTCGTAGGCTCACGCTGACATCTCAGCACAGGAATTCTTTCAGAAAATGCTaGGTCTCCCTCAGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: RQRRPGTRRLTLTSQHRNSFRKC*VSLRRC
Trigger: GCACCTCCTGAGGGAGACCCAGCATTTTCTGAAAGA...ATTCCTGTGCTGAGATGTCAGCGTGAGCCTACGAGTCCCAGGTCTGCGCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR TCA 90 bp TTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCCTTCCCCCAGGGGACCCACTGGTaGCCAAGGCCTTGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: FIGSLKLSGSSVQWTSFPQGTHW*PRPCAS
Trigger: TGAAGCACAAGGCCTTGGTCACCAGTGGGTCCCCTG...GGGGAAGGAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR GCA 90 bp AGGCAGCGCAGACCTGGGACTCGTAGGCTCACGCTGACATCTCAGCACAGGAATACCCCCTCCAGGGAATaGCATGTGTCTTTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: RQRRPGTRRLTLTSQHRNTPSRE*HVSFRK
Trigger: TTTTCTGAAAGACACATGGCATTCCCTGGAGGGGGT...ATTCCTGTGCTGAGATGTCAGCGTGAGCCTACGAGTCCCAGGTCTGCGCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp GCCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCGTCCTCCCCATTGGCTaGCTCCTGCACAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: AKIYWQFKTKWLVGPVDLVLPIG*LLHRGG
Trigger: GCCTCCTCTGTGCAGGAGCCAGCCAATGGGGAGGAC...GAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCCGGACCGCAGCTTGACTaGGAAGGGGCTCTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: PRFIGSLKLSGSSVQWTSGPQLD*EGALVL
Trigger: GAGGACCAGAGCCCCTTCCCAGTCAAGCTGCGGTCC...GGAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CCTGCCACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTGTTTGGAGAACTTTCTaGCAGAGATGGGGACTCCAA +
Preference number: 4 (lower is better)
Translates to: PATSLPLLLGVGGFLQETVWRTF*QRWGLQ
Trigger: TTGGAGTCCCCATCTCTGCCAGAAAGTTCTCCAAAC...AGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR TCA 90 bp CCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCCCAGGGGACCCACTGGTaGCCAAGGCCTTGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: PRFIGSLKLSGSSVQWTSQGTHW*PRPCAS
Trigger: TGAAGCACAAGGCCTTGGTCACCAGTGGGTCCCCTG...GGAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR TCA 90 bp CACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTGGATTATGTCGCTCCAGGCTTaGGATTTCTTTCTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: HVPSSPSRGGWVSSGNWIMSLQA*DFFLAS
Trigger: ACTCGCCAGAAAGAAATCTCAAGCCTGGAGCGACAT...AATCCAGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp AGGCAGCGCAGACCTGGGACTCGTAGGCTCACGCTGACATCTCAGCACAGGAATTCCTTCTGGACACTTTaGTCCTGTCTCTCTGTATCT +
Preference number: 4 (lower is better)
Translates to: RQRRPGTRRLTLTSQHRNSFWTL*SCLSVS
Trigger: AGATACAGAGAGACAGGACCAAAGTGTCCAGAAGGA...ATTCCTGTGCTGAGATGTCAGCGTGAGCCTACGAGTCCCAGGTCTGCGCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp TTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCCTTCCCCGGGCACGTGCCCTGCTaGAGGTCACAGAAAACCTCT +
Preference number: 4 (lower is better)
Translates to: FIGSLKLSGSSVQWTSFPGHVPC*RSQKTS
Trigger: AGAGGTTTTCTGTGACCTCCAGCAGGGCACGTGCCC...GGGGAAGGAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CTGCTTGCCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGAAGGCTCGGCAGAAGTaGCTTCCTGGGCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LLAKIYWQFKTKWLVGPVKARQK*LPGQGW
Trigger: CCACCCCTGCCCAGGAAGCCACTTCTGCCGAGCCTT...CACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGGCAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp GCCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCCATGGTGATCCAGGGTaGGGTGGGTTGCCCATCAGC +
Preference number: 4 (lower is better)
Translates to: AKIYWQFKTKWLVGPVDLHGDPG*GGLPIS
Trigger: GCTGATGGGCAACCCACCCCACCCTGGATCACCATG...GAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CCTGCCACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTGCTGACATGAAGCAATaGCTTCTCCTCATAGTCTTC +
Preference number: 4 (lower is better)
Translates to: PATSLPLLLGVGGFLQETADMKQ*LLLIVF
Trigger: GAAGACTATGAGGAGAAGCCATTGCTTCATGTCAGC...AGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR TCA 90 bp CACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTGGATTCCCTTTTCAGCTCCCTaGTTGGACAATTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HVPSSPSRGGWVSSGNWIPFSAP*LDNFSF
Trigger: GAAGGAGAAATTGTCCAATCAGGGAGCTGAAAAGGG...AATCCAGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR TCA 90 bp CTGCTTGCCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGTTTCTCTTCCTGGTTaGCGGGCAGGTCTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LLAKIYWQFKTKWLVGPVVSLPG*RAGLGL
Trigger: GAGCCCCAGACCTGCCCGTCAACCAGGAAGAGAAAC...CACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGGCAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR GCA 90 bp CTGCTTGCCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGTCTCCCTCAGGAGGTaGAGAGCCCTCCTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LLAKIYWQFKTKWLVGPVVSLRR*RALLGR
Trigger: CCTTCCAAGGAGGGCTCTGCACCTCCTGAGGGAGAC...CACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGGCAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCCGGGCACGTGCCCTGCTaGAGGTCACAGAAAACCTCT +
Preference number: 4 (lower is better)
Translates to: PRFIGSLKLSGSSVQWTSGHVPC*RSQKTS
Trigger: AGAGGTTTTCTGTGACCTCCAGCAGGGCACGTGCCC...GGAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CTGCTTGCCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGTCTGGTCCTCCCCATTaGCTGGCTCCTGCACAGAGG +
Preference number: 4 (lower is better)
Translates to: LLAKIYWQFKTKWLVGPVSGPPH*LAPAQR
Trigger: CCTCTGTGCAGGAGCCAGCCAATGGGGAGGACCAGA...CACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGGCAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp TTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCCTTCCCCGCTGCTCAGGAGACCTaGTCTTTCCTTTCCCTTGCC +
Preference number: 4 (lower is better)
Translates to: FIGSLKLSGSSVQWTSFPAAQET*SFLSLA
Trigger: GGCAAGGGAAAGGAAAGACCAGGTCTCCTGAGCAGC...GGGGAAGGAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CTGCTTGCCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGCAGAAGTGGCTTCCTaGGCAGGGGTGGCTTGGTAC +
Preference number: 4 (lower is better)
Translates to: LLAKIYWQFKTKWLVGPVAEVAS*AGVAWY
Trigger: GTACCAAGCCACCCCTGCCCAGGAAGCCACTTCTGC...CACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGGCAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCCGTTGACGGGCAGGTCTaGGGCTCCTCTTCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: PRFIGSLKLSGSSVQWTSVDGQV*GSSSLL
Trigger: CAGAAGAGAAGAGGAGCCCCAGACCTGCCCGTCAAC...GGAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCCGTGCAGAGCCCTCCTTaGAAGGTCCCATGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: PRFIGSLKLSGSSVQWTSVQSPP*KVPCPS
Trigger: AGAGGGACATGGGACCTTCCAAGGAGGGCTCTGCAC...GGAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR TCA 90 bp CTGCTTGCCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGTCTCTCTGGACCTCCTaGGGTTGCAGCCTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: LLAKIYWQFKTKWLVGPVSLWTS*GCSLCR
Trigger: CCTACACAGGCTGCAACCTCAGGAGGTCCAGAGAGA...CACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGGCAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR TCA 90 bp GCCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCCTTGAGGTTCAGTTTTaGCCCCTGCCTCTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: AKIYWQFKTKWLVGPVDLLEVQF*PLPLGH
Trigger: GTGACCCAGAGGCAGGGGTCAAAACTGAACCTCAAG...GAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR TCA 90 bp CCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCCTCTCGGGAGGTTCCATaGCACCCTTGTGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: PRFIGSLKLSGSSVQWTSSREVP*HPCEVL
Trigger: CAACACCTCACAAGGGTGTCATGGAACCTCCCGAGA...GGAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR GCA 90 bp TTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCCTTCCCCAAGGTCGTCAAGTGCTaGCTCACTCTTCCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: FIGSLKLSGSSVQWTSFPKVVKC*LTLPGK
Trigger: CTTGCCTGGAAGAGTGAGGCAGCACTTGACGACCTT...GGGGAAGGAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp AAACAATCATGCCTATTAGTAAACAAGAAAGACCACGATGGCCCACGGCAAGACGGGTGGCTTGGTACCTaGCTGCTCAGGAGACCTGGT +
Preference number: 4 (lower is better)
Translates to: KQSCLLVNKKDHDGPRQDGWLGT*LLRRPG
Trigger: ACCAGGTCTCCTGAGCAGCCAGGTACCAAGCCACCC...GTCTTGCCGTGGGCCATCGTGGTCTTTCTTGTTTACTAATAGGCATGATTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp GCCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCTTTGACCCCTGCCTCTaGGTCACAGCAGGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: AKIYWQFKTKWLVGPVDLFDPCL*VTAGFA
Trigger: TGCAAAGCCTGCTGTGACCCAGAGGCAGGGGTCAAA...GAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCCTCGCACACATTTTCTTaGGAGAACACCCGCACGGGC +
Preference number: 4 (lower is better)
Translates to: PRFIGSLKLSGSSVQWTSSHTFS*ENTRTG
Trigger: GCCCGTGCGGGTGTTCTCCCAAGAAAATGTGTGCGA...GGAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp AGGCAGCGCAGACCTGGGACTCGTAGGCTCACGCTGACATCTCAGCACAGGAATATGGAGAATATGGTTTaGAGAACTTTCTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: RQRRPGTRRLTLTSQHRNMENMV*RTFWQR
Trigger: TCTCTGCCAGAAAGTTCTCCAAACCATATTCTCCAT...ATTCCTGTGCTGAGATGTCAGCGTGAGCCTACGAGTCCCAGGTCTGCGCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR TCA 90 bp CCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCCATCTCCCTCAGAAGGTaGCAAGTCTCTTTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PRFIGSLKLSGSSVQWTSISLRR*QVSFWG
Trigger: CCCCCAGAAAGAGACTTGTCACCTTCTGAGGGAGAT...GGAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR TCA 90 bp CTGCTTGCCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGCTTGAGGTTCAGTTTTaGCCCCTGCCTCTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: LLAKIYWQFKTKWLVGPVLEVQF*PLPLGH
Trigger: GTGACCCAGAGGCAGGGGTCAAAACTGAACCTCAAG...CACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGGCAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR GCA 90 bp GCCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCGGTCACAGCAGGCTTTaGAGGGGTCATCAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: AKIYWQFKTKWLVGPVDLGHSRL*RGHQER
Trigger: TCTTTCCTGATGACCCCTGCAAAGCCTGCTGTGACC...GAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR GCA 90 bp TTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCCTTCCCCGTGTCTTTCAGAAAATaGTGGGTCTCCCTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: FIGSLKLSGSSVQWTSFPVSFRK*WVSLRR
Trigger: CCTCCTGAGGGAGACCCAGCATTTTCTGAAAGACAC...GGGGAAGGAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CTGCTTGCCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGCTGCTCAGGAGACCTaGTCTTTCCTTTCCCTTGCC +
Preference number: 4 (lower is better)
Translates to: LLAKIYWQFKTKWLVGPVAAQET*SFLSLA
Trigger: GGCAAGGGAAAGGAAAGACCAGGTCTCCTGAGCAGC...CACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGGCAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp AAACAATCATGCCTATTAGTAAACAAGAAAGACCACGATGGCCCACGGCAAGACGTTGACGGGCAGGTCTaGGGCTCCTCTTCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: KQSCLLVNKKDHDGPRQDVDGQV*GSSSLL
Trigger: CAGAAGAGAAGAGGAGCCCCAGACCTGCCCGTCAAC...GTCTTGCCGTGGGCCATCGTGGTCTTTCTTGTTTACTAATAGGCATGATTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp TTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCCTTCCCCCTGTACTGGCGTAACTaGCCCTCTTCAGCTGATGAA +
Preference number: 4 (lower is better)
Translates to: FIGSLKLSGSSVQWTSFPLYWRN*PSSADE
Trigger: TTCATCAGCTGAAGAGGGCCAGTTACGCCAGTACAG...GGGGAAGGAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR TCA 90 bp CTGCTTGCCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGATCTCCCTCAGAAGGTaGCAAGTCTCTTTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LLAKIYWQFKTKWLVGPVISLRR*QVSFWG
Trigger: CCCCCAGAAAGAGACTTGTCACCTTCTGAGGGAGAT...CACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGGCAAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR GCA 90 bp CTGCTTGCCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGAAGGTCGTCAAGTGCTaGCTCACTCTTCCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: LLAKIYWQFKTKWLVGPVKVVKC*LTLPGK
Trigger: CTTGCCTGGAAGAGTGAGGCAGCACTTGACGACCTT...CACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGGCAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCCAGCTCCTCTTCCTTCTaGACACTTTGGTCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: PRFIGSLKLSGSSVQWTSSSSSF*TLWSCL
Trigger: GAGACAGGACCAAAGTGTCCAGAAGGAAGAGGAGCT...GGAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp AAACAATCATGCCTATTAGTAAACAAGAAAGACCACGATGGCCCACGGCAAGACTGTCTTCCGGTCCTGTaGCTTTGGCAGCACCTGAAG +
Preference number: 4 (lower is better)
Translates to: KQSCLLVNKKDHDGPRQDCLPVL*LWQHLK
Trigger: CTTCAGGTGCTGCCAAAGCCACAGGACCGGAAGACA...GTCTTGCCGTGGGCCATCGTGGTCTTTCTTGTTTACTAATAGGCATGATTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp GCCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCATGGCTTTGGCCTCTTaGGCAGAGCTGTCTCTGTAT +
Preference number: 4 (lower is better)
Translates to: AKIYWQFKTKWLVGPVDLMALAS*AELSLY
Trigger: ATACAGAGACAGCTCTGCCCAAGAGGCCAAAGCCAT...GAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp AAACAATCATGCCTATTAGTAAACAAGAAAGACCACGATGGCCCACGGCAAGACGGCTCTGTTCATCTTTaGGAAGCAGAGCCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: KQSCLLVNKKDHDGPRQDGSVHL*EAEPGL
Trigger: GAGGCCTGGCTCTGCTTCCCAAAGATGAACAGAGCC...GTCTTGCCGTGGGCCATCGTGGTCTTTCTTGTTTACTAATAGGCATGATTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp AAACAATCATGCCTATTAGTAAACAAGAAAGACCACGATGGCCCACGGCAAGACCTCTCTCGGCCACCTTaGCTTGCTTCCCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: KQSCLLVNKKDHDGPRQDLSRPP*LASQFL
Trigger: CAGAAACTGGGAAGCAAGCCAAGGTGGCCGAGAGAG...GTCTTGCCGTGGGCCATCGTGGTCTTTCTTGTTTACTAATAGGCATGATTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR GCA 90 bp AAACAATCATGCCTATTAGTAAACAAGAAAGACCACGATGGCCCACGGCAAGACGGTCACAGCAGGCTTTaGAGGGGTCATCAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: KQSCLLVNKKDHDGPRQDGHSRL*RGHQER
Trigger: TCTTTCCTGATGACCCCTGCAAAGCCTGCTGTGACC...GTCTTGCCGTGGGCCATCGTGGTCTTTCTTGTTTACTAATAGGCATGATTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp TTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCCTTCCCCTCCTTCTGGACACTTTaGTCCTGTCTCTCTGTATCT +
Preference number: 4 (lower is better)
Translates to: FIGSLKLSGSSVQWTSFPSFWTL*SCLSVS
Trigger: AGATACAGAGAGACAGGACCAAAGTGTCCAGAAGGA...GGGGAAGGAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp AAACAATCATGCCTATTAGTAAACAAGAAAGACCACGATGGCCCACGGCAAGACACAACTGCTTTGTCTTaGACTGCTGGGCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: KQSCLLVNKKDHDGPRQDTTALS*TAGPGS
Trigger: AGAGCCTGGCCCAGCAGTCCAAGACAAAGCAGTTGT...GTCTTGCCGTGGGCCATCGTGGTCTTTCTTGTTTACTAATAGGCATGATTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp TTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCCTTCCCCTTTCAGCTCCCTGATTaGACAATTTCTCCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: FIGSLKLSGSSVQWTSFPFQLPD*TISPSW
Trigger: CCAGGAAGGAGAAATTGTCCAATCAGGGAGCTGAAA...GGGGAAGGAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CTGCTTGCCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGATGGCTGATCTGTACTaGCGTAACTGGCCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LLAKIYWQFKTKWLVGPVMADLY*RNWPSS
Trigger: TGAAGAGGGCCAGTTACGCCAGTACAGATCAGCCAT...CACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGGCAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR GCA 90 bp AAACAATCATGCCTATTAGTAAACAAGAAAGACCACGATGGCCCACGGCAAGACCGACTTTTTCTTTCCTaGACCATCTTCCCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: KQSCLLVNKKDHDGPRQDRLFLS*TIFPKA
Trigger: GGCCTTGGGGAAGATGGTGCAGGAAAGAAAAAGTCG...GTCTTGCCGTGGGCCATCGTGGTCTTTCTTGTTTACTAATAGGCATGATTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp AAACAATCATGCCTATTAGTAAACAAGAAAGACCACGATGGCCCACGGCAAGACCTGTACTGGCGTAACTaGCCCTCTTCAGCTGATGAA +
Preference number: 4 (lower is better)
Translates to: KQSCLLVNKKDHDGPRQDLYWRN*PSSADE
Trigger: TTCATCAGCTGAAGAGGGCCAGTTACGCCAGTACAG...GTCTTGCCGTGGGCCATCGTGGTCTTTCTTGTTTACTAATAGGCATGATTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CTGCTTGCCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGTGCCATGTTGTCCTTaGAAGGTGACATGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: LLAKIYWQFKTKWLVGPVVPCCP*KVTCLS
Trigger: AGAGAGACATGTCACCTTCCAAGGACAACATGGCAC...CACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGGCAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp AAACAATCATGCCTATTAGTAAACAAGAAAGACCACGATGGCCCACGGCAAGACCTTGAGATTTCTTTCTaGCGAGTTCCATCCAGGATG +
Preference number: 4 (lower is better)
Translates to: KQSCLLVNKKDHDGPRQDLEISF*RVPSRM
Trigger: CATCCTGGATGGAACTCGCCAGAAAGAAATCTCAAG...GTCTTGCCGTGGGCCATCGTGGTCTTTCTTGTTTACTAATAGGCATGATTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CTGCTTGCCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGTTACTATGGAGAATATaGTTTGGAGAACTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: LLAKIYWQFKTKWLVGPVLLWRI*FGELSG
Trigger: GCCAGAAAGTTCTCCAAACCATATTCTCCATAGTAA...CACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGGCAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR CCA 90 bp CTGCTTGCCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGTTCTGGCTCTTACTATaGAGAATATGGTTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: LLAKIYWQFKTKWLVGPVFWLLL*RIWFGE
Trigger: TTCTCCAAACCATATTCTCCATAGTAAGAGCCAGAA...CACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGGCAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp ACGGCAAGACGGTGGCCAGAGGCACTGGCTGATGGCAAGAGGCAGCGCAGACCTGCTTCCTGGGGGCTCTaGCCCGGTCCTGCCTGGCCG +
Preference number: 5 (lower is better)
Translates to: TARRWPEALADGKRQRRPASWGL*PGPAWP
Trigger: CGGCCAGGCAGGACCGGGCAAGAGCCCCCAGGAAGC...AGGTCTGCGCTGCCTCTTGCCATCAGCCAGTGCCTCTGGCCACCGTCTTGCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp AGGCAGCGCAGACCTGGGACTCGTAGGCTCACGCTGACATCTCAGCACAGGAATGCTTCCTGGGGGCTCTaGCCCGGTCCTGCCTGGCCG +
Preference number: 5 (lower is better)
Translates to: RQRRPGTRRLTLTSQHRNASWGL*PGPAWP
Trigger: CGGCCAGGCAGGACCGGGCAAGAGCCCCCAGGAAGC...ATTCCTGTGCTGAGATGTCAGCGTGAGCCTACGAGTCCCAGGTCTGCGCTGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp GAGGCACTGGCTGATGGCAAGAGGCAGCGCAGACCTGGGACTCGTAGGCTCACGCTGGGCAGGGGTGGCTaGGTACCTGGCTGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: EALADGKRQRRPGTRRLTLGRGG*VPGCSG
Trigger: TCCTGAGCAGCCAGGTACCAAGCCACCCCTGCCCAG...CGTGAGCCTACGAGTCCCAGGTCTGCGCTGCCTCTTGCCATCAGCCAGTGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS TCA 90 bp ACTCCGCTCGTTCTTTCTCCCCAGGGCTGTTCTCTCTGGACCTCCTaGGGTTGCAGCCTGTGTAGGCCTGGGGCGGGCGGGAGGCACAAC +
Preference number: 5 (lower is better)
Translates to: TPLVLSPQGCSLWTS*GCSLCRPGAGGRHN
Trigger: GTTGTGCCTCCCGCCCGCCCCAGGCCTACACAGGCTGCAACCTCAGGAGGTCCAGAGAGAACAGCCCTGGGGAGAAAGAACGAGCGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 90 bp CCGTTGGGGGACCTGGAGCCTCGCAGTGCAGGAGCTGCCCCGACGTaGCTCTGTTCATCTTTGGGAAGCAGAGCCAGGCCTCCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: PLGDLEPRSAGAAPT*LCSSLGSRARPPFS
Trigger: GGAGAAAGGAGGCCTGGCTCTGCTTCCCAAAGATGAACAGAGCCACGTCGGGGCAGCTCCTGCACTGCGAGGCTCCAGGTCCCCCAACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp ACGGCAAGACGGTGGCCAGAGGCACTGGCTGATGGCAAGAGGCAGCGCAGACCTCTCTGGTCCTCCCCATaGGCTGGCTCCTGCACAGAG +
Preference number: 5 (lower is better)
Translates to: TARRWPEALADGKRQRRPLWSSP*AGSCTE
Trigger: CTCTGTGCAGGAGCCAGCCAATGGGGAGGACCAGAG...AGGTCTGCGCTGCCTCTTGCCATCAGCCAGTGCCTCTGGCCACCGTCTTGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp CCTGCCACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTCCAGGGTGGGGTGGGTaGCCCATCAGCCCCAGGACC +
Preference number: 5 (lower is better)
Translates to: PATSLPLLLGVGGFLQETPGWGG*PISPRT
Trigger: GGTCCTGGGGCTGATGGGCAACCCACCCCACCCTGG...AGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS GCA 90 bp CTCGGCAGAAGTGGCTTCCTGGGCAGGGGTGGCTTGGTACCTGGCTaGTCAGGAGACCTGGTCTTTCCTTTCCCTTGCCCGTTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: LGRSGFLGRGGLVPG*SGDLVFPFPCPLGD
Trigger: GTCCCCCAACGGGCAAGGGAAAGGAAAGACCAGGTCTCCTGAGCAGCCAGGTACCAAGCCACCCCTGCCCAGGAAGCCACTTCTGCCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 90 bp TCTCTCAGACTCCCCAGGGCTGGTATCCAGGCCTGTGGGTGGGTATaGCAAGGTAAGGCTCGGCAGAAGTGGCTTCCTGGGCAGGGGTGG +
Preference number: 5 (lower is better)
Translates to: SLRLPRAGIQACGWV*QGKARQKWLPGQGW
Trigger: CCACCCCTGCCCAGGAAGCCACTTCTGCCGAGCCTTACCTTGCCATACCCACCCACAGGCCTGGATACCAGCCCTGGGGAGTCTGAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp TCTGGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCCGTTCCCCCTGGTTCCTCGGTTTCTCTTCCTGGTaGACGGGCAGGTCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: SGPALRLSAGLLRSPWFLGFSSW*TGRSGA
Trigger: AGCCCCAGACCTGCCCGTCAACCAGGAAGAGAAACC...GAGGAACCAGGGGGAACGGAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp TCTGGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCCGTTCCCCCTGGTTCCTCGCCGCCTCAGTTTACTaGATCGCTGGTTGCGGGGCT +
Preference number: 5 (lower is better)
Translates to: SGPALRLSAGLLRSPWFLAASVY*IAGCGA
Trigger: AGCCCCGCAACCAGCGATCAAGTAAACTGAGGCGGC...GAGGAACCAGGGGGAACGGAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS GCA 90 bp CTTCCGGTCCTGTGGCTTTGGCAGCACCTGAAGGTCGTCAAGTGCTaGCTCACTCTTCCAGGCAAGGCCACTCCGCAGCAAGGGTGCTCG +
Preference number: 5 (lower is better)
Translates to: LPVLWLWQHLKVVKC*LTLPGKATPQQGCS
Trigger: CGAGCACCCTTGCTGCGGAGTGGCCTTGCCTGGAAGAGTGAGGCAGCACTTGACGACCTTCAGGTGCTGCCAAAGCCACAGGACCGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 90 bp AAGGCTCGGCAGAAGTGGCTTCCTGGGCAGGGGTGGCTTGGTACCTaGCTGCTCAGGAGACCTGGTCTTTCCTTTCCCTTGCCCGTTGGG +
Preference number: 5 (lower is better)
Translates to: KARQKWLPGQGWLGT*LLRRPGLSFPLPVG
Trigger: CCCAACGGGCAAGGGAAAGGAAAGACCAGGTCTCCTGAGCAGCCAGGTACCAAGCCACCCCTGCCCAGGAAGCCACTTCTGCCGAGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp TCTGGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCCGTTCCCCCTGGTTCCTCCACAACTGCTTTGTCTaGGACTGCTGGGCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: SGPALRLSAGLLRSPWFLHNCFV*DCWARL
Trigger: GAGCCTGGCCCAGCAGTCCAAGACAAAGCAGTTGTG...GAGGAACCAGGGGGAACGGAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp ACGGCAAGACGGTGGCCAGAGGCACTGGCTGATGGCAAGAGGCAGCGCAGACCTTCGGCGCTGTACCTCTaGATGGCTTTGGCCTCTTGG +
Preference number: 5 (lower is better)
Translates to: TARRWPEALADGKRQRRPSALYL*MALASW
Trigger: CCAAGAGGCCAAAGCCATCAAGAGGTACAGCGCCGA...AGGTCTGCGCTGCCTCTTGCCATCAGCCAGTGCCTCTGGCCACCGTCTTGCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp AGGCAGCGCAGACCTGGGACTCGTAGGCTCACGCTGACATCTCAGCACAGGAATCTGGGCAGGGGTGGCTaGGTACCTGGCTGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: RQRRPGTRRLTLTSQHRNLGRGG*VPGCSG
Trigger: TCCTGAGCAGCCAGGTACCAAGCCACCCCTGCCCAG...ATTCCTGTGCTGAGATGTCAGCGTGAGCCTACGAGTCCCAGGTCTGCGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS GCA 90 bp TGTCTTCCGGTCCTGTGGCTTTGGCAGCACCTGAAGGTCGTCAAGTaGTGCCTCACTCTTCCAGGCAAGGCCACTCCGCAGCAAGGGTGC +
Preference number: 5 (lower is better)
Translates to: CLPVLWLWQHLKVVK*CLTLPGKATPQQGC
Trigger: GCACCCTTGCTGCGGAGTGGCCTTGCCTGGAAGAGTGAGGCAGCACTTGACGACCTTCAGGTGCTGCCAAAGCCACAGGACCGGAAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp ACGGCAAGACGGTGGCCAGAGGCACTGGCTGATGGCAAGAGGCAGCGCAGACCTTGGCTCTGTTCATCTTaGGGAAGCAGAGCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: TARRWPEALADGKRQRRPWLCSS*GSRARP
Trigger: AGGCCTGGCTCTGCTTCCCAAAGATGAACAGAGCCA...AGGTCTGCGCTGCCTCTTGCCATCAGCCAGTGCCTCTGGCCACCGTCTTGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp CATTCTTGCCACAGCCCCTCTGGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCGTCGCACACATTTTCTaGGGAGAACACCCGCACGGG +
Preference number: 5 (lower is better)
Translates to: HSCHSPSGPALRLSAGLLVAHIF*GEHPHG
Trigger: CCCGTGCGGGTGTTCTCCCAAGAAAATGTGTGCGAC...GAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGAGGGGCTGTGGCAAGAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp ACGGCAAGACGGTGGCCAGAGGCACTGGCTGATGGCAAGAGGCAGCGCAGACCTGGTGCTATGATCCTCTaGGGAGGTGCCATGTTGTCC +
Preference number: 5 (lower is better)
Translates to: TARRWPEALADGKRQRRPGAMIL*GGAMLS
Trigger: GGACAACATGGCACCTCCCAAGAGGATCATAGCACC...AGGTCTGCGCTGCCTCTTGCCATCAGCCAGTGCCTCTGGCCACCGTCTTGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS TCA 90 bp GGGTGCCATGATCTTCTTGGGAGGTGCCACATCTCCCTCGGGAGGTaGCATGTCTCTCTCTGGGGGTGCCATGATCCTCTTGGGAGGTGC +
Preference number: 5 (lower is better)
Translates to: GCHDLLGRCHISLGR*HVSLWGCHDPLGRC
Trigger: GCACCTCCCAAGAGGATCATGGCACCCCCAGAGAGAGACATGTCACCTCCCGAGGGAGATGTGGCACCTCCCAAGAAGATCATGGCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS GCA 90 bp ATGTGCAGAATACTCCGGAAGGCGAGAGCCGCTGACACGGGCACGTaGCCTGCTGGAGGTCACAGAAAACCTCTTAACGCTGCTGCGCTG +
Preference number: 5 (lower is better)
Translates to: MCRILRKARAADTGT*PAGGHRKPLNAAAL
Trigger: CAGCGCAGCAGCGTTAAGAGGTTTTCTGTGACCTCCAGCAGGGCACGTGCCCGTGTCAGCGGCTCTCGCCTTCCGGAGTATTCTGCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 90 bp GTATGGCAAGGTAAGGCTCGGCAGAAGTGGCTTCCTGGGCAGGGGTaGCTTGGTACCTGGCTGCTCAGGAGACCTGGTCTTTCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: VWQGKARQKWLPGQG*LGTWLLRRPGLSFP
Trigger: GGGAAAGGAAAGACCAGGTCTCCTGAGCAGCCAGGTACCAAGCCACCCCTGCCCAGGAAGCCACTTCTGCCGAGCCTTACCTTGCCATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 90 bp TATGAGTCTCTCAGACTCCCCAGGGCTGGTATCCAGGCCTGTGGGTaGGTATGGCAAGGTAAGGCTCGGCAGAAGTGGCTTCCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: YESLRLPRAGIQACG*VWQGKARQKWLPGQ
Trigger: CTGCCCAGGAAGCCACTTCTGCCGAGCCTTACCTTGCCATACCCACCCACAGGCCTGGATACCAGCCCTGGGGAGTCTGAGAGACTCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 90 bp CTTTATAGTTGTGCCTGGACCCACATCGTGCAGCAGGGACATCTCTaGGGGGCTGCGGGGCAGTCCGTCATCCTCAGAACTCATGCCGGT +
Preference number: 5 (lower is better)
Translates to: LYSCAWTHIVQQGHL*GAAGQSVILRTHAG
Trigger: ACCGGCATGAGTTCTGAGGATGACGGACTGCCCCGCAGCCCCCCAGAGATGTCCCTGCTGCACGATGTGGGTCCAGGCACAACTATAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp CCTGCCACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTTGCTTCAGGCAGCTCTaGGGTACTGGAGGGCTTGGG +
Preference number: 5 (lower is better)
Translates to: PATSLPLLLGVGGFLQETCFRQL*GTGGLG
Trigger: CCCAAGCCCTCCAGTACCCAAGAGCTGCCTGAAGCA...AGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS TCA 90 bp CCACATCTCCCTCGGGAGGTGACATGTCTCTCTCTGGGGGTGCCATaGTCTTCTTGGGAGGTGCCACATCTCCCTCGGGAGGTGACATGT +
Preference number: 5 (lower is better)
Translates to: PHLPREVTCLSLGVP*SSWEVPHLPREVTC
Trigger: ACATGTCACCTCCCGAGGGAGATGTGGCACCTCCCAAGAAGATCATGGCACCCCCAGAGAGAGACATGTCACCTCCCGAGGGAGATGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS TCA 90 bp GGGTGCCATGATCTTCTTGGGAGGTGCCACATCTCCCTCGGGAGGTaGCATGTCTCTCTCTGGGGGTGCCATGATCTTCTTGGGAGGTGC +
Preference number: 5 (lower is better)
Translates to: GCHDLLGRCHISLGR*HVSLWGCHDLLGRC
Trigger: GCACCTCCCAAGAAGATCATGGCACCCCCAGAGAGAGACATGTCACCTCCCGAGGGAGATGTGGCACCTCCCAAGAAGATCATGGCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS GCA 90 bp GCTGGAGGTCACAGAAAACCTCTTAACGCTGCTGCGCTGTGGCTCTaGACTCCGCTCGTTCTTTCTCCCCAGGGCTGTTCTCTCTGGACC +
Preference number: 5 (lower is better)
Translates to: AGGHRKPLNAAALWL*TPLVLSPQGCSLWT
Trigger: GGTCCAGAGAGAACAGCCCTGGGGAGAAAGAACGAGCGGAGTGCAGAGCCACAGCGCAGCAGCGTTAAGAGGTTTTCTGTGACCTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 90 bp TGCCCTGCTGGAGGTCACAGAAAACCTCTTAACGCTGCTGCGCTGTaGCTCTGCACTCCGCTCGTTCTTTCTCCCCAGGGCTGTTCTCTC +
Preference number: 5 (lower is better)
Translates to: CPAGGHRKPLNAAAL*LCTPLVLSPQGCSL
Trigger: GAGAGAACAGCCCTGGGGAGAAAGAACGAGCGGAGTGCAGAGCCACAGCGCAGCAGCGTTAAGAGGTTTTCTGTGACCTCCAGCAGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp CCTGCCACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTATGGGGACTCCAAGCTaGGGACTGAGACCACCATGG +
Preference number: 5 (lower is better)
Translates to: PATSLPLLLGVGGFLQETMGTPS*GLRPPW
Trigger: CCATGGTGGTCTCAGTCCCAAGCTTGGAGTCCCCAT...AGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp CACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTGGATTGGTGCAGAGCCCTCCTaGGAAGGTCCCATGTCCCTC +
Preference number: 5 (lower is better)
Translates to: HVPSSPSRGGWVSSGNWIGAEPS*EGPMSL
Trigger: GAGGGACATGGGACCTTCCAAGGAGGGCTCTGCACC...AATCCAGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS TCA 90 bp GGGTGCCATGATCTTCTTGGGAGGTGCCACATCTCCCTCGGAAGGTaGCATGTCTCTCTCTGGGGGTGCCATGATCTTCTTGGGAGGTGC +
Preference number: 5 (lower is better)
Translates to: GCHDLLGRCHISLGR*HVSLWGCHDLLGRC
Trigger: GCACCTCCCAAGAAGATCATGGCACCCCCAGAGAGAGACATGTCACCTTCCGAGGGAGATGTGGCACCTCCCAAGAAGATCATGGCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS TCA 90 bp GGGTGCCATGATCTTCTTGGGAGGTGCCACATCTCCTTCGGGAGGTaGCATGTCTCTCTCTGGGGGTGCCATGATCTTCTTGGGAGGTGC +
Preference number: 5 (lower is better)
Translates to: GCHDLLGRCHISFGR*HVSLWGCHDLLGRC
Trigger: GCACCTCCCAAGAAGATCATGGCACCCCCAGAGAGAGACATGTCACCTCCCGAAGGAGATGTGGCACCTCCCAAGAAGATCATGGCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS TCA 90 bp CAGTTTCTGTCTTTAGGATCCTCGACCCAGGTTTCTCTTCCTGGTTaGCGGGCAGGTCTGGGGCTCCTCTTCTCTTCTGCCGGGCCATGG +
Preference number: 5 (lower is better)
Translates to: QFLSLGSSTQVSLPG*RAGLGLLFSSAGPW
Trigger: CCATGGCCCGGCAGAAGAGAAGAGGAGCCCCAGACCTGCCCGTCAACCAGGAAGAGAAACCTGGGTCGAGGATCCTAAAGACAGAAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS TCA 90 bp CAGGCACTCAGACTGCGCCCTCGAAGACAGCCGCCTCAGTTTACTTaGTCGCTGGTTGCGGGGCTTCACCAGGAGTTTGTGTTTAGCTGC +
Preference number: 5 (lower is better)
Translates to: QALRLRPRRQPPQFT*SLVAGLHQEFVFSC
Trigger: GCAGCTAAACACAAACTCCTGGTGAAGCCCCGCAACCAGCGATCAAGTAAACTGAGGCGGCTGTCTTCGAGGGCGCAGTCTGAGTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS GCA 90 bp GCCTCTGGGTCACAGCAGGCTTTGCAGGGGTCATCAGGAAAGATTTaGTCCGGACGAAGTCACCCTGCTTCACAGACTCCTGGGCTCTCT +
Preference number: 5 (lower is better)
Translates to: ASGSQQALQGSSGKI*SGRSHPASQTPGLS
Trigger: AGAGAGCCCAGGAGTCTGTGAAGCAGGGTGACTTCGTCCGGAGCAAATCTTTCCTGATGACCCCTGCAAAGCCTGCTGTGACCCAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp CATTCTTGCCACAGCCCCTCTGGCCCGGCACTGAGGCTGTCTGCTGGTCTTCTCGTGGTGTGTCTCCCTTaGGAAGTGATGTGTCCCTAT +
Preference number: 5 (lower is better)
Translates to: HSCHSPSGPALRLSAGLLVVCLP*EVMCPY
Trigger: ATAGGGACACATCACTTCCAAAGGGAGACACACCAC...GAGAAGACCAGCAGACAGCCTCAGTGCCGGGCCAGAGGGGCTGTGGCAAGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp CACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTGGATTTGCTTCAGGCAGCTCTaGGGTACTGGAGGGCTTGGG +
Preference number: 5 (lower is better)
Translates to: HVPSSPSRGGWVSSGNWICFRQL*GTGGLG
Trigger: CCCAAGCCCTCCAGTACCCAAGAGCTGCCTGAAGCA...AATCCAGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS TCA 90 bp CCACATCTCCTTCGGGAGGTGACATGTCTCTCTCTGGGGGTGCCATaGTCTTCTTGGGAGGTGCCACATCTCCCTCGGAAGGTGACATGT +
Preference number: 5 (lower is better)
Translates to: PHLLREVTCLSLGVP*SSWEVPHLPRKVTC
Trigger: ACATGTCACCTTCCGAGGGAGATGTGGCACCTCCCAAGAAGATCATGGCACCCCCAGAGAGAGACATGTCACCTCCCGAAGGAGATGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS TCA 90 bp AGGCTCCATGATTCCTTTGGGTGGTGCCATGTCACCCTTGAAAGGTaGCATGTCCCTCTCTGGGGGTGCCATGATCCTCTTGGGAGGTGC +
Preference number: 5 (lower is better)
Translates to: RLHDSFGWCHVTLER*HVPLWGCHDPLGRC
Trigger: GCACCTCCCAAGAGGATCATGGCACCCCCAGAGAGGGACATGTCACCTTTCAAGGGTGACATGGCACCACCCAAAGGAATCATGGAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS GCA 90 bp AGGTATGCTACCCCCTCCAGGGAATGCCATGTGTCTTTCAGAAAATaGTGGGTCTCCCTCAGGAGGTGCAGAGCCCTCCTTGGAAGGTCC +
Preference number: 5 (lower is better)
Translates to: RYATPSRECHVSFRK*WVSLRRCRALLGRS
Trigger: GGACCTTCCAAGGAGGGCTCTGCACCTCCTGAGGGAGACCCAGCATTTTCTGAAAGACACATGGCATTCCCTGGAGGGGGTAGCATACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS CCA 90 bp CCCTCAGGCCTGGGTACCACCACCAGGGTCAGCTCCTCTTCCTTCTaGACACTTTGGTCCTGTCTCTCTGTATCTGAAGGTGTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: PSGLGTTTRVSSSSF*TLWSCLSVSEGVSK
Trigger: CTTGGAGACACCTTCAGATACAGAGAGACAGGACCAAAGTGTCCAGAAGGAAGAGGAGCTGACCCTGGTGGTGGTACCCAGGCCTGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 90 bp CGAAGTCACCCTGCTTCACAGACTCCTGGGCTCTCTCGGCCACCTTaGCTTGCTTCCCAGTTTCTGTCTTTAGGATCCTCGACCCAGGTT +
Preference number: 5 (lower is better)
Translates to: RSHPASQTPGLSRPP*LASQFLSLGSSTQV
Trigger: AACCTGGGTCGAGGATCCTAAAGACAGAAACTGGGAAGCAAGCCAAGGTGGCCGAGAGAGCCCAGGAGTCTGTGAAGCAGGGTGACTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp GGCACTGAGGCTGTCTGCTGGTCTTCTCCGTTCCCCCTGGTTCCTCTCTCTTCTCATGTCGCTCCAGGCTaGAGATTTCTTTCTGGCGAG +
Preference number: 5 (lower is better)
Translates to: GTEAVCWSSPFPLVPLSSHVAPG*RFLSGE
Trigger: CTCGCCAGAAAGAAATCTCAAGCCTGGAGCGACATG...AGAAGAGAGAGGAACCAGGGGGAACGGAGAAGACCAGCAGACAGCCTCAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS GCA 90 bp TCACCCTGCTTCACAGACTCCTGGGCTCTCTCGGCCACCTTGGCTTaGTTCCCAGTTTCTGTCTTTAGGATCCTCGACCCAGGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: SPCFTDSWALSATLA*FPVSVFRILDPGFS
Trigger: AGAGAAACCTGGGTCGAGGATCCTAAAGACAGAAACTGGGAAGCAAGCCAAGGTGGCCGAGAGAGCCCAGGAGTCTGTGAAGCAGGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS GCA 90 bp GAATGCCATGTGTCTTTCAGAAAATGCTGGGTCTCCCTCAGGAGGTaGAGAGCCCTCCTTGGAAGGTCCCATGTCCCTCTCAGGGACATC +
Preference number: 5 (lower is better)
Translates to: ECHVSFRKCWVSLRR*RALLGRSHVPLRDI
Trigger: GATGTCCCTGAGAGGGACATGGGACCTTCCAAGGAGGGCTCTGCACCTCCTGAGGGAGACCCAGCATTTTCTGAAAGACACATGGCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS CCA 90 bp TCAGACTGCGCCCTCGAAGACAGCCGCCTCAGTTTACTTGATCGCTaGTTGCGGGGCTTCACCAGGAGTTTGTGTTTAGCTGCAGAGTTG +
Preference number: 5 (lower is better)
Translates to: SDCALEDSRLSLLDR*LRGFTRSLCLAAEL
Trigger: CAACTCTGCAGCTAAACACAAACTCCTGGTGAAGCCCCGCAACCAGCGATCAAGTAAACTGAGGCGGCTGTCTTCGAGGGCGCAGTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS CCA 90 bp TATGCTACCCCCTCCAGGGAATGCCATGTGTCTTTCAGAAAATGCTaGGTCTCCCTCAGGAGGTGCAGAGCCCTCCTTGGAAGGTCCCAT +
Preference number: 5 (lower is better)
Translates to: YATPSRECHVSFRKC*VSLRRCRALLGRSH
Trigger: ATGGGACCTTCCAAGGAGGGCTCTGCACCTCCTGAGGGAGACCCAGCATTTTCTGAAAGACACATGGCATTCCCTGGAGGGGGTAGCATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp AAACAATCATGCCTATTAGTAAACAAGAAAGACCACGATGGCCCACGGCAAGACCCAGGGTGGGGTGGGTaGCCCATCAGCCCCAGGACC +
Preference number: 5 (lower is better)
Translates to: KQSCLLVNKKDHDGPRQDPGWGG*PISPRT
Trigger: GGTCCTGGGGCTGATGGGCAACCCACCCCACCCTGG...GTCTTGCCGTGGGCCATCGTGGTCTTTCTTGTTTACTAATAGGCATGATTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS TCA 90 bp GTTTGGAGAACTTTCTGGCAGAGATGGGGACTCCAAGCTTGGGACTaGGACCACCATGGGCTCAGTAACTTCTGGCGTAGCTGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: VWRTFWQRWGLQAWD*DHHGLSNFWRSWKA
Trigger: AGCCTTCCAGCTACGCCAGAAGTTACTGAGCCCATGGTGGTCTCAGTCCCAAGCTTGGAGTCCCCATCTCTGCCAGAAAGTTCTCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS CCA 90 bp TCCAACCTGACTTCGGCGCTGTACCTCTTGATGGCTTTGGCCTCTTaGGCAGAGCTGTCTCTGTATTTAAGTGAGAGTGAGGTGGACCGC +
Preference number: 5 (lower is better)
Translates to: SNLTSALYLLMALAS*AELSLYLSESEVDR
Trigger: GCGGTCCACCTCACTCTCACTTAAATACAGAGACAGCTCTGCCCAAGAGGCCAAAGCCATCAAGAGGTACAGCGCCGAAGTCAGGTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 90 bp AGGAAAGATTTGCTCCGGACGAAGTCACCCTGCTTCACAGACTCCTaGGCTCTCTCGGCCACCTTGGCTTGCTTCCCAGTTTCTGTCTTT +
Preference number: 5 (lower is better)
Translates to: RKDLLRTKSPCFTDS*ALSATLACFPVSVF
Trigger: AAAGACAGAAACTGGGAAGCAAGCCAAGGTGGCCGAGAGAGCCCAGGAGTCTGTGAAGCAGGGTGACTTCGTCCGGAGCAAATCTTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 90 bp TACTGGCGTAACTGGCCCTCTTCAGCTGATGAAGTTCCTTCTCTGTaGTCGCTGCAGCCTGAGCTGCCAAGTTCTGATGGGACAGTGAGA +
Preference number: 5 (lower is better)
Translates to: YWRNWPSSADEVPSL*SLQPELPSSDGTVR
Trigger: TCTCACTGTCCCATCAGAACTTGGCAGCTCAGGCTGCAGCGACCACAGAGAAGGAACTTCATCAGCTGAAGAGGGCCAGTTACGCCAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000160023.6
CDS CCA 90 bp TTCTGGCGAGTTCCATCCAGGATGGCTGATCTGTACTGGCGTAACTaGCCCTCTTCAGCTGATGAAGTTCCTTCTCTGTGGTCGCTGCAG +
Preference number: 5 (lower is better)
Translates to: FWRVPSRMADLYWRN*PSSADEVPSLWSLQ
Trigger: CTGCAGCGACCACAGAGAAGGAACTTCATCAGCTGAAGAGGGCCAGTTACGCCAGTACAGATCAGCCATCCTGGATGGAACTCGCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 90 bp TGTATCTTTAACTGCAAAGCCTTGATCCGGTCGCACACATTTTCTTaGGAGAACACCCGCACGGGCCGAGCAGGGTCCTGTCCCGATTCA +
Preference number: 5 (lower is better)
Translates to: CIFNCKALIRSHTFS*ENTRTGRAGSCPDS
Trigger: TGAATCGGGACAGGACCCTGCTCGGCCCGTGCGGGTGTTCTCCCAAGAAAATGTGTGCGACCGGATCAAGGCTTTGCAGTTAAAGATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp GCCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCCTCTGGTCCTCCCCATaGGCTGGCTCCTGCACAGAG +
Preference number: 5 (lower is better)
Translates to: AKIYWQFKTKWLVGPVDLLWSSP*AGSCTE
Trigger: CTCTGTGCAGGAGCCAGCCAATGGGGAGGACCAGAG...GAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp CACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTGGATTCATGTCGCTCCAGGCTaGAGATTTCTTTCTGGCGAG +
Preference number: 5 (lower is better)
Translates to: HVPSSPSRGGWVSSGNWIHVAPG*RFLSGE
Trigger: CTCGCCAGAAAGAAATCTCAAGCCTGGAGCGACATG...AATCCAGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp AGGCAGCGCAGACCTGGGACTCGTAGGCTCACGCTGACATCTCAGCACAGGAATTGTTTAGCTGCAGAGTaGTCCAGGCAGGAAGAGAAT +
Preference number: 5 (lower is better)
Translates to: RQRRPGTRRLTLTSQHRNCLAAE*SRQEEN
Trigger: ATTCTCTTCCTGCCTGGACAACTCTGCAGCTAAACA...ATTCCTGTGCTGAGATGTCAGCGTGAGCCTACGAGTCCCAGGTCTGCGCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS TCA 90 bp AGGTGCTATGATCCTCTTGGGAGGTGCCATGTTGTCCTTGGAAGGTaGCATGTCTCTCTCGGGAGGTTCCATGACACCCTTGTGAGGTGT +
Preference number: 5 (lower is better)
Translates to: RCYDPLGRCHVVLGR*HVSLGRFHDTLVRC
Trigger: ACACCTCACAAGGGTGTCATGGAACCTCCCGAGAGAGACATGTCACCTTCCAAGGACAACATGGCACCTCCCAAGAGGATCATAGCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS GCA 90 bp AGGTGTTGTGTTTCCTTCAGGAGGTATGCTACCCCCTCCAGGGAATaGCATGTGTCTTTCAGAAAATGCTGGGTCTCCCTCAGGAGGTGC +
Preference number: 5 (lower is better)
Translates to: RCCVSFRRYATPSRE*HVSFRKCWVSLRRC
Trigger: GCACCTCCTGAGGGAGACCCAGCATTTTCTGAAAGACACATGGCATTCCCTGGAGGGGGTAGCATACCTCCTGAAGGAAACACAACACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS CCA 90 bp GTCGCTCCAGGCTTGAGATTTCTTTCTGGCGAGTTCCATCCAGGATaGCTGATCTGTACTGGCGTAACTGGCCCTCTTCAGCTGATGAAG +
Preference number: 5 (lower is better)
Translates to: VAPGLRFLSGEFHPG*LICTGVTGPLQLMK
Trigger: CTTCATCAGCTGAAGAGGGCCAGTTACGCCAGTACAGATCAGCCATCCTGGATGGAACTCGCCAGAAAGAAATCTCAAGCCTGGAGCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 90 bp TGTTTAGCTGCAGAGTTGTCCAGGCAGGAAGAGAATTCTGGAGGGTaGCTGAAGTCAACCACAGGAGCTAGGCTACCATCCAAGGTCCGA +
Preference number: 5 (lower is better)
Translates to: CLAAELSRQEENSGG*LKSTTGARLPSKVR
Trigger: TCGGACCTTGGATGGTAGCCTAGCTCCTGTGGTTGACTTCAGCCACCCTCCAGAATTCTCTTCCTGCCTGGACAACTCTGCAGCTAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS CCA 90 bp GGACACAGGCCTCCAGGGGACAGCTCTTCCTTCTGGCTCTTACTATaGAGAATATGGTTTGGAGAACTTTCTGGCAGAGATGGGGACTCC +
Preference number: 5 (lower is better)
Translates to: GHRPPGDSSSFWLLL*RIWFGELSGRDGDS
Trigger: GGAGTCCCCATCTCTGCCAGAAAGTTCTCCAAACCATATTCTCCATAGTAAGAGCCAGAAGGAAGAGCTGTCCCCTGGAGGCCTGTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp TTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCCTTCCCCTCGGCGCTGTACCTCTaGATGGCTTTGGCCTCTTGG +
Preference number: 5 (lower is better)
Translates to: FIGSLKLSGSSVQWTSFPSALYL*MALASW
Trigger: CCAAGAGGCCAAAGCCATCAAGAGGTACAGCGCCGA...GGGGAAGGAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS TCA 90 bp GTGGCCCCATCTTCACGTTACATTGTATCTTTAACTGCAAAGCCTTaGTCCGGTCGCACACATTTTCTTGGGAGAACACCCGCACGGGCC +
Preference number: 5 (lower is better)
Translates to: VAPSSRYIVSLTAKP*SGRTHFLGRTPARA
Trigger: GGCCCGTGCGGGTGTTCTCCCAAGAAAATGTGTGCGACCGGATCAAGGCTTTGCAGTTAAAGATACAATGTAACGTGAAGATGGGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS CCA 90 bp CTGGGTACCACCACCAGGGTCAGCTCCTCTTCCTTCTGGACACTTTaGTCCTGTCTCTCTGTATCTGAAGGTGTCTCCAAGTTGGTATCA +
Preference number: 5 (lower is better)
Translates to: LGTTTRVSSSSFWTL*SCLSVSEGVSKLVS
Trigger: TGATACCAACTTGGAGACACCTTCAGATACAGAGAGACAGGACCAAAGTGTCCAGAAGGAAGAGGAGCTGACCCTGGTGGTGGTACCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 90 bp CTCTCCACTAGGGGACACAGGCCTCCAGGGGACAGCTCTTCCTTCTaGCTCTTACTATGGAGAATATGGTTTGGAGAACTTTCTGGCAGA +
Preference number: 5 (lower is better)
Translates to: LSTRGHRPPGDSSSF*LLLWRIWFGELSGR
Trigger: TCTGCCAGAAAGTTCTCCAAACCATATTCTCCATAGTAAGAGCCAGAAGGAAGAGCTGTCCCCTGGAGGCCTGTGTCCCCTAGTGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp TTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCCTTCCCCTACCTCTTGATGGCTTaGGCCTCTTGGGCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: FIGSLKLSGSSVQWTSFPYLLMA*ASWAEL
Trigger: CAGCTCTGCCCAAGAGGCCAAAGCCATCAAGAGGTA...GGGGAAGGAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp GCCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCGTTTCCTCTGCCCGCTaGATAGGAAGGCCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: AKIYWQFKTKWLVGPVDLVSSAR*IGRPPG
Trigger: TCCAGGAGGCCTTCCTATCAAGCGGGCAGAGGAAAC...GAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS TCA 90 bp GGTATCAGTGATAGTCTCAGGAGGTGGTGTGTCTCCCTTTGGAAGTaGTGTGTCCCTATTAGGAGGCTCCATGATTCCTTTGGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: GISDSLRRWCVSLWK*CVPIRRLHDSFGWC
Trigger: GCACCACCCAAAGGAATCATGGAGCCTCCTAATAGGGACACATCACTTCCAAAGGGAGACACACCACCTCCTGAGACTATCACTGATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 90 bp GAGATTTCTTTCTGGCGAGTTCCATCCAGGATGGCTGATCTGTACTaGCGTAACTGGCCCTCTTCAGCTGATGAAGTTCCTTCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: EISFWRVPSRMADLY*RNWPSSADEVPSLW
Trigger: CCACAGAGAAGGAACTTCATCAGCTGAAGAGGGCCAGTTACGCCAGTACAGATCAGCCATCCTGGATGGAACTCGCCAGAAAGAAATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp TTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGGACCTCCTTCCCCCTCTGTAGCCCTTCCTaGAGGTTCAGTTTTGACCCC +
Preference number: 5 (lower is better)
Translates to: FIGSLKLSGSSVQWTSFPLCSPS*RFSFDP
Trigger: GGGGTCAAAACTGAACCTCAAGGAAGGGCTACAGAG...GGGGAAGGAGGTCCACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS TCA 90 bp CAGCTCCTCTTCCTTCTGGACACTTTGGTCCTGTCTCTCTGTATCTaGAGGTGTCTCCAAGTTGGTATCAGTGATAGTCTCAGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: QLLFLLDTLVLSLCI*RCLQVGISDSLRRW
Trigger: CCACCTCCTGAGACTATCACTGATACCAACTTGGAGACACCTTCAGATACAGAGAGACAGGACCAAAGTGTCCAGAAGGAAGAGGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp CTGCTTGCCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGTACCTCTTGATGGCTTaGGCCTCTTGGGCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: LLAKIYWQFKTKWLVGPVYLLMA*ASWAEL
Trigger: CAGCTCTGCCCAAGAGGCCAAAGCCATCAAGAGGTA...CACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGGCAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp CACGTCCCTTCCTCTCCTTCTCGGGGTGGGTGGGTTTCTTCAGGAAACTGGATTTATGGAGAATATGGTTaGGAGAACTTTCTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: HVPSSPSRGGWVSSGNWIYGEYG*ENFLAE
Trigger: CTCTGCCAGAAAGTTCTCCAAACCATATTCTCCATA...AATCCAGTTTCCTGAAGAAACCCACCCACCCCGAGAAGGAGAGGAAGGGACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp AAACAATCATGCCTATTAGTAAACAAGAAAGACCACGATGGCCCACGGCAAGACTGGCTCTGTTCATCTTaGGGAAGCAGAGCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: KQSCLLVNKKDHDGPRQDWLCSS*GSRARP
Trigger: AGGCCTGGCTCTGCTTCCCAAAGATGAACAGAGCCA...GTCTTGCCGTGGGCCATCGTGGTCTTTCTTGTTTACTAATAGGCATGATTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp CTGCTTGCCAAGATTTATTGGCAGTTTAAAACTAAGTGGCTCGTCGGTCCAGTGCTCTGTAGCCCTTCCTaGAGGTTCAGTTTTGACCCC +
Preference number: 5 (lower is better)
Translates to: LLAKIYWQFKTKWLVGPVLCSPS*RFSFDP
Trigger: GGGGTCAAAACTGAACCTCAAGGAAGGGCTACAGAG...CACTGGACCGACGAGCCACTTAGTTTTAAACTGCCAATAAATCTTGGCAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp AAACAATCATGCCTATTAGTAAACAAGAAAGACCACGATGGCCCACGGCAAGACGTGGTGTGTCTCCCTTaGGAAGTGATGTGTCCCTAT +
Preference number: 5 (lower is better)
Translates to: KQSCLLVNKKDHDGPRQDVVCLP*EVMCPY
Trigger: ATAGGGACACATCACTTCCAAAGGGAGACACACCAC...GTCTTGCCGTGGGCCATCGTGGTCTTTCTTGTTTACTAATAGGCATGATTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS-3UTR CAA 90 bp AAACAATCATGCCTATTAGTAAACAAGAAAGACCACGATGGCCCACGGCAAGACGGCTTCACCAGGAGTTaGTGTTTAGCTGCAGAGTTG +
Preference number: 5 (lower is better)
Translates to: KQSCLLVNKKDHDGPRQDGFTRS*CLAAEL
Trigger: CAACTCTGCAGCTAAACACAAACTCCTGGTGAAGCC...GTCTTGCCGTGGGCCATCGTGGTCTTTCTTGTTTACTAATAGGCATGATTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS CCA 72 bp GGCTCCTGCACAGAGGAGGCACATGGCTCAGCTTCCTaGGGGCTCTTGCCCGGTCCTGCCTGGCCGGCCCCC +
Preference number: 6 (lower is better)
Translates to: GSCTEEAHGSAS*GLLPGPAWPAP
Trigger: GGGGGCCGGCCAGGCAGGACCGGGCAAGAGCCCCCAGGAAGCTGAGCCATGTGCCTCCTCTGTGCAGGAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS GCA 72 bp GGGAAGGGGCTCTGGTCCTCCCCATTGGCTGGCTCCTaGACAGAGGAGGCACATGGCTCAGCTTCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: GKGLWSSPLAGS*TEEAHGSASWG
Trigger: CCCCCAGGAAGCTGAGCCATGTGCCTCCTCTGTGCAGGAGCCAGCCAATGGGGAGGACCAGAGCCCCTTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 72 bp CTCCCCATTGGCTGGCTCCTGCACAGAGGAGGCACATaGCTCAGCTTCCTGGGGGCTCTTGCCCGGTCCTGC +
Preference number: 6 (lower is better)
Translates to: LPIGWLLHRGGT*LSFLGALARSC
Trigger: GCAGGACCGGGCAAGAGCCCCCAGGAAGCTGAGCCATGTGCCTCCTCTGTGCAGGAGCCAGCCAATGGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 72 bp ACCTGGTCTTTCCTTTCCCTTGCCCGTTGGGGGACCTaGAGCCTCGCAGTGCAGGAGCTGCCCCGACGTGGC +
Preference number: 6 (lower is better)
Translates to: TWSFLSLARWGT*SLAVQELPRRG
Trigger: GCCACGTCGGGGCAGCTCCTGCACTGCGAGGCTCCAGGTCCCCCAACGGGCAAGGGAAAGGAAAGACCAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS GCA 72 bp GGCAAGGCCACTCCGCAGCAAGGGTGCTCGGCCCCCTaGAGGCACATGTGCAGAATACTCCGGAAGGCGAGA +
Preference number: 6 (lower is better)
Translates to: GKATPQQGCSAP*RHMCRILRKAR
Trigger: TCTCGCCTTCCGGAGTATTCTGCACATGTGCCTGCAGGGGGCCGAGCACCCTTGCTGCGGAGTGGCCTTGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS GCA 72 bp CCCGTTGGGGGACCTGGAGCCTCGCAGTGCAGGAGCTaGCCCGACGTGGCTCTGTTCATCTTTGGGAAGCAG +
Preference number: 6 (lower is better)
Translates to: PVGGPGASQCRS*PDVALFIFGKQ
Trigger: CTGCTTCCCAAAGATGAACAGAGCCACGTCGGGGCAGCTCCTGCACTGCGAGGCTCCAGGTCCCCCAACGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS GCA 72 bp TGGTTGACGGGCAGGTCTGGGGCTCCTCTTCTCTTCTaGCGGGCCATGGTGATCCAGGGTGGGGTGGGTTGC +
Preference number: 6 (lower is better)
Translates to: WLTGRSGAPLLF*RAMVIQGGVGC
Trigger: GCAACCCACCCCACCCTGGATCACCATGGCCCGGCAGAAGAGAAGAGGAGCCCCAGACCTGCCCGTCAACCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 72 bp GCTCAGGAGACCTGGTCTTTCCTTTCCCTTGCCCGTTaGGGGACCTGGAGCCTCGCAGTGCAGGAGCTGCCC +
Preference number: 6 (lower is better)
Translates to: AQETWSFLSLAR*GTWSLAVQELP
Trigger: GGGCAGCTCCTGCACTGCGAGGCTCCAGGTCCCCCAACGGGCAAGGGAAAGGAAAGACCAGGTCTCCTGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CAA 90 bp TCCTCTTCTCTTCTGCCGGGCCATGGTGATCCAGGGTGGGGTGGGTaGCCCATCAGCCCCAGGACCTGTAGCCGCAGGAGGCTGACCCTT +
Preference number: 6 (lower is better)
Translates to: SSSLLPGHGDPGWGG*PISPRTCSRRRLTL
Trigger: AAGGGTCAGCCTCCTGCGGCTACAGGTCCTGGGGCTGATGGGCAACCCACCCCACCCTGGATCACCATGGCCCGGCAGAAGAGAAGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS GCA 72 bp CCTGGCTGCTCAGGAGACCTGGTCTTTCCTTTCCCTTaGCCGTTGGGGGACCTGGAGCCTCGCAGTGCAGGA +
Preference number: 6 (lower is better)
Translates to: PGCSGDLVFPFP*PLGDLEPRSAG
Trigger: TCCTGCACTGCGAGGCTCCAGGTCCCCCAACGGGCAAGGGAAAGGAAAGACCAGGTCTCCTGAGCAGCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 72 bp GACCTGGAGCCTCGCAGTGCAGGAGCTGCCCCGACGTaGCTCTGTTCATCTTTGGGAAGCAGAGCCAGGCCT +
Preference number: 6 (lower is better)
Translates to: DLEPRSAGAAPT*LCSSLGSRARP
Trigger: AGGCCTGGCTCTGCTTCCCAAAGATGAACAGAGCCACGTCGGGGCAGCTCCTGCACTGCGAGGCTCCAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 72 bp TGTGCCTGGACCCACATCGTGCAGCAGGGACATCTCTaGGGGGCTGCGGGGCAGTCCGTCATCCTCAGAACT +
Preference number: 6 (lower is better)
Translates to: CAWTHIVQQGHL*GAAGQSVILRT
Trigger: AGTTCTGAGGATGACGGACTGCCCCGCAGCCCCCCAGAGATGTCCCTGCTGCACGATGTGGGTCCAGGCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS CAA 72 bp TGCTCAGGAGACCTGGTCTTTCCTTTCCCTTGCCCGTaGGGGGACCTGGAGCCTCGCAGTGCAGGAGCTGCC +
Preference number: 6 (lower is better)
Translates to: CSGDLVFPFPCP*GDLEPRSAGAA
Trigger: GGCAGCTCCTGCACTGCGAGGCTCCAGGTCCCCCAACGGGCAAGGGAAAGGAAAGACCAGGTCTCCTGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CAA 90 bp GTTGCAGCCTGTGTAGGCCTGGGGCGGGCGGGAGGCACAACTGCTTaGTCTTGGACTGCTGGGCCAGGCTCTTTCAGAGGAGACTCTGCA +
Preference number: 6 (lower is better)
Translates to: VAACVGLGRAGGTTA*SWTAGPGSFRGDSA
Trigger: TGCAGAGTCTCCTCTGAAAGAGCCTGGCCCAGCAGTCCAAGACAAAGCAGTTGTGCCTCCCGCCCGCCCCAGGCCTACACAGGCTGCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS GCA 72 bp TTTCCCTTGCCCGTTGGGGGACCTGGAGCCTCGCAGTaGAGGAGCTGCCCCGACGTGGCTCTGTTCATCTTT +
Preference number: 6 (lower is better)
Translates to: FPLPVGGPGASQ*RSCPDVALFIF
Trigger: AAAGATGAACAGAGCCACGTCGGGGCAGCTCCTGCACTGCGAGGCTCCAGGTCCCCCAACGGGCAAGGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS GCA 72 bp AGTGGCTTCCTGGGCAGGGGTGGCTTGGTACCTGGCTaGTCAGGAGACCTGGTCTTTCCTTTCCCTTGCCCG +
Preference number: 6 (lower is better)
Translates to: SGFLGRGGLVPG*SGDLVFPFPCP
Trigger: CGGGCAAGGGAAAGGAAAGACCAGGTCTCCTGAGCAGCCAGGTACCAAGCCACCCCTGCCCAGGAAGCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 72 bp GCGGGCGGGAGGCACAACTGCTTTGTCTTGGACTGCTaGGCCAGGCTCTTTCAGAGGAGACTCTGCAGGGGA +
Preference number: 6 (lower is better)
Translates to: AGGRHNCFVLDC*ARLFQRRLCRG
Trigger: TCCCCTGCAGAGTCTCCTCTGAAAGAGCCTGGCCCAGCAGTCCAAGACAAAGCAGTTGTGCCTCCCGCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 72 bp CTTGACTGGGAAGGGGCTCTGGTCCTCCCCATTGGCTaGCTCCTGCACAGAGGAGGCACATGGCTCAGCTTC +
Preference number: 6 (lower is better)
Translates to: LDWEGALVLPIG*LLHRGGTWLSF
Trigger: GAAGCTGAGCCATGTGCCTCCTCTGTGCAGGAGCCAGCCAATGGGGAGGACCAGAGCCCCTTCCCAGTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 72 bp GGCTCGGCAGAAGTGGCTTCCTGGGCAGGGGTGGCTTaGTACCTGGCTGCTCAGGAGACCTGGTCTTTCCTT +
Preference number: 6 (lower is better)
Translates to: GSAEVASWAGVA*YLAAQETWSFL
Trigger: AAGGAAAGACCAGGTCTCCTGAGCAGCCAGGTACCAAGCCACCCCTGCCCAGGAAGCCACTTCTGCCGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 72 bp GGTAAGGCTCGGCAGAAGTGGCTTCCTGGGCAGGGGTaGCTTGGTACCTGGCTGCTCAGGAGACCTGGTCTT +
Preference number: 6 (lower is better)
Translates to: GKARQKWLPGQG*LGTWLLRRPGL
Trigger: AAGACCAGGTCTCCTGAGCAGCCAGGTACCAAGCCACCCCTGCCCAGGAAGCCACTTCTGCCGAGCCTTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 72 bp TGTGGGTGGGTATGGCAAGGTAAGGCTCGGCAGAAGTaGCTTCCTGGGCAGGGGTGGCTTGGTACCTGGCTG +
Preference number: 6 (lower is better)
Translates to: CGWVWQGKARQK*LPGQGWLGTWL
Trigger: CAGCCAGGTACCAAGCCACCCCTGCCCAGGAAGCCACTTCTGCCGAGCCTTACCTTGCCATACCCACCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CAA 72 bp TGTGTAGGCCTGGGGCGGGCGGGAGGCACAACTGCTTaGTCTTGGACTGCTGGGCCAGGCTCTTTCAGAGGA +
Preference number: 6 (lower is better)
Translates to: CVGLGRAGGTTA*SWTAGPGSFRG
Trigger: TCCTCTGAAAGAGCCTGGCCCAGCAGTCCAAGACAAAGCAGTTGTGCCTCCCGCCCGCCCCAGGCCTACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CAA 72 bp AGGCTCGGCAGAAGTGGCTTCCTGGGCAGGGGTGGCTaGGTACCTGGCTGCTCAGGAGACCTGGTCTTTCCT +
Preference number: 6 (lower is better)
Translates to: RLGRSGFLGRGG*VPGCSGDLVFP
Trigger: AGGAAAGACCAGGTCTCCTGAGCAGCCAGGTACCAAGCCACCCCTGCCCAGGAAGCCACTTCTGCCGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CAA 90 bp TCTTTCAGAGGAGACTCTGCAGGGGACCCACTGGTGACCAAGGCCTaGTGCTTCAGGCAGCTCTTGGGTACTGGAGGGCTTGGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: SFRGDSAGDPLVTKA*CFRQLLGTGGLGAG
Trigger: CCCTGCCCCAAGCCCTCCAGTACCCAAGAGCTGCCTGAAGCACAAGGCCTTGGTCACCAGTGGGTCCCCTGCAGAGTCTCCTCTGAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CAA 90 bp GGCAAGGTAAGGCTCGGCAGAAGTGGCTTCCTGGGCAGGGGTGGCTaGGTACCTGGCTGCTCAGGAGACCTGGTCTTTCCTTTCCCTTGC +
Preference number: 6 (lower is better)
Translates to: GKVRLGRSGFLGRGG*VPGCSGDLVFPFPC
Trigger: GCAAGGGAAAGGAAAGACCAGGTCTCCTGAGCAGCCAGGTACCAAGCCACCCCTGCCCAGGAAGCCACTTCTGCCGAGCCTTACCTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CAA 90 bp GAGTCATACACGGGCCCCGACTCCTCAACGGCAATGACCTCGCTCTaGGCCGGATTTTGCTTCCAGGCGCTGTTTCCTGTGGGTGAGGGG +
Preference number: 6 (lower is better)
Translates to: ESYTGPDSSTAMTSL*AGFCFQALFPVGEG
Trigger: CCCCTCACCCACAGGAAACAGCGCCTGGAAGCAAAATCCGGCCAAGAGCGAGGTCATTGCCGTTGAGGAGTCGGGGCCCGTGTATGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS TCA 72 bp CCTCGGGAGGTGACATGTCTCTCTCTGGGGGTGCCATaGTCTTCTTGGGAGGTGCCACATCTCCCTCGGGAG +
Preference number: 6 (lower is better)
Translates to: PREVTCLSLGVP*SSWEVPHLPRE
Trigger: CTCCCGAGGGAGATGTGGCACCTCCCAAGAAGATCATGGCACCCCCAGAGAGAGACATGTCACCTCCCGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS GCA 72 bp GTCCTGTGGCTTTGGCAGCACCTGAAGGTCGTCAAGTaGTGCCTCACTCTTCCAGGCAAGGCCACTCCGCAG +
Preference number: 6 (lower is better)
Translates to: VLWLWQHLKVVK*CLTLPGKATPQ
Trigger: CTGCGGAGTGGCCTTGCCTGGAAGAGTGAGGCAGCACTTGACGACCTTCAGGTGCTGCCAAAGCCACAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS GCA 72 bp CAGTCCGTCATCCTCAGAACTCATGCCGGTTTCCTCTaGCCGCTTGATAGGAAGGCCTCCTGGAGGCGGTGG +
Preference number: 6 (lower is better)
Translates to: QSVILRTHAGFL*PLDRKASWRRW
Trigger: CCACCGCCTCCAGGAGGCCTTCCTATCAAGCGGGCAGAGGAAACCGGCATGAGTTCTGAGGATGACGGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS CCA 72 bp CGACCCAGGTTTCTCTTCCTGGTTGACGGGCAGGTCTaGGGCTCCTCTTCTCTTCTGCCGGGCCATGGTGAT +
Preference number: 6 (lower is better)
Translates to: RPRFLFLVDGQV*GSSSLLPGHGD
Trigger: ATCACCATGGCCCGGCAGAAGAGAAGAGGAGCCCCAGACCTGCCCGTCAACCAGGAAGAGAAACCTGGGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CAA 72 bp ACGGGCCCCGACTCCTCAACGGCAATGACCTCGCTCTaGGCCGGATTTTGCTTCCAGGCGCTGTTTCCTGTG +
Preference number: 6 (lower is better)
Translates to: TGPDSSTAMTSL*AGFCFQALFPV
Trigger: CACAGGAAACAGCGCCTGGAAGCAAAATCCGGCCAAGAGCGAGGTCATTGCCGTTGAGGAGTCGGGGCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS TCA 72 bp CCTCGGAAGGTGACATGTCTCTCTCTGGGGGTGCCATaGTCTTCTTGGGAGGTGCCACATCTCCCTCGGGAG +
Preference number: 6 (lower is better)
Translates to: PRKVTCLSLGVP*SSWEVPHLPRE
Trigger: CTCCCGAGGGAGATGTGGCACCTCCCAAGAAGATCATGGCACCCCCAGAGAGAGACATGTCACCTTCCGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS GCA 72 bp TTGGACTGCTGGGCCAGGCTCTTTCAGAGGAGACTCTaGAGGGGACCCACTGGTGACCAAGGCCTTGTGCTT +
Preference number: 6 (lower is better)
Translates to: LDCWARLFQRRL*RGPTGDQGLVL
Trigger: AAGCACAAGGCCTTGGTCACCAGTGGGTCCCCTGCAGAGTCTCCTCTGAAAGAGCCTGGCCCAGCAGTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS GCA 72 bp ATACTCCGGAAGGCGAGAGCCGCTGACACGGGCACGTaGCCTGCTGGAGGTCACAGAAAACCTCTTAACGCT +
Preference number: 6 (lower is better)
Translates to: ILRKARAADTGT*PAGGHRKPLNA
Trigger: AGCGTTAAGAGGTTTTCTGTGACCTCCAGCAGGGCACGTGCCCGTGTCAGCGGCTCTCGCCTTCCGGAGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS GCA 72 bp CTGTGGCTTTGGCAGCACCTGAAGGTCGTCAAGTGCTaGCTCACTCTTCCAGGCAAGGCCACTCCGCAGCAA +
Preference number: 6 (lower is better)
Translates to: LWLWQHLKVVKC*LTLPGKATPQQ
Trigger: TTGCTGCGGAGTGGCCTTGCCTGGAAGAGTGAGGCAGCACTTGACGACCTTCAGGTGCTGCCAAAGCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 72 bp GGAGGTCACAGAAAACCTCTTAACGCTGCTGCGCTGTaGCTCTGCACTCCGCTCGTTCTTTCTCCCCAGGGC +
Preference number: 6 (lower is better)
Translates to: GGHRKPLNAAAL*LCTPLVLSPQG
Trigger: GCCCTGGGGAGAAAGAACGAGCGGAGTGCAGAGCCACAGCGCAGCAGCGTTAAGAGGTTTTCTGTGACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 72 bp CAGAAGTGGCTTCCTGGGCAGGGGTGGCTTGGTACCTaGCTGCTCAGGAGACCTGGTCTTTCCTTTCCCTTG +
Preference number: 6 (lower is better)
Translates to: QKWLPGQGWLGT*LLRRPGLSFPL
Trigger: CAAGGGAAAGGAAAGACCAGGTCTCCTGAGCAGCCAGGTACCAAGCCACCCCTGCCCAGGAAGCCACTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CAA 72 bp AGTGCAGGAGCTGCCCCGACGTGGCTCTGTTCATCTTaGGGAAGCAGAGCCAGGCCTCCTTTCTCCAACCTG +
Preference number: 6 (lower is better)
Translates to: SAGAAPTWLCSS*GSRARPPFSNL
Trigger: CAGGTTGGAGAAAGGAGGCCTGGCTCTGCTTCCCAAAGATGAACAGAGCCACGTCGGGGCAGCTCCTGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CAA 90 bp TGCCTCTGGGTCACAGCAGGCTTTGCAGGGGTCATCAGGAAAGATTaGCTCCGGACGAAGTCACCCTGCTTCACAGACTCCTGGGCTCTC +
Preference number: 6 (lower is better)
Translates to: CLWVTAGFAGVIRKD*LRTKSPCFTDSWAL
Trigger: GAGAGCCCAGGAGTCTGTGAAGCAGGGTGACTTCGTCCGGAGCAAATCTTTCCTGATGACCCCTGCAAAGCCTGCTGTGACCCAGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS TCA 72 bp CTTCGGGAGGTGACATGTCTCTCTCTGGGGGTGCCATaGTCTTCTTGGGAGGTGCCACATCTCCCTCGGAAG +
Preference number: 6 (lower is better)
Translates to: LREVTCLSLGVP*SSWEVPHLPRK
Trigger: CTTCCGAGGGAGATGTGGCACCTCCCAAGAAGATCATGGCACCCCCAGAGAGAGACATGTCACCTCCCGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS TCA 72 bp GCTCTTTCAGAGGAGACTCTGCAGGGGACCCACTGGTaGCCAAGGCCTTGTGCTTCAGGCAGCTCTTGGGTA +
Preference number: 6 (lower is better)
Translates to: ALSEETLQGTHW*PRPCASGSSWV
Trigger: TACCCAAGAGCTGCCTGAAGCACAAGGCCTTGGTCACCAGTGGGTCCCCTGCAGAGTCTCCTCTGAAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS TCA 72 bp AGACTGCGCCCTCGAAGACAGCCGCCTCAGTTTACTTaGTCGCTGGTTGCGGGGCTTCACCAGGAGTTTGTG +
Preference number: 6 (lower is better)
Translates to: RLRPRRQPPQFT*SLVAGLHQEFV
Trigger: CACAAACTCCTGGTGAAGCCCCGCAACCAGCGATCAAGTAAACTGAGGCGGCTGTCTTCGAGGGCGCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS GCA 72 bp TCCTCAACGGCAATGACCTCGCTCTTGGCCGGATTTTaGTTCCAGGCGCTGTTTCCTGTGGGTGAGGGGGAT +
Preference number: 6 (lower is better)
Translates to: SSTAMTSLLAGF*FQALFPVGEGD
Trigger: ATCCCCCTCACCCACAGGAAACAGCGCCTGGAAGCAAAATCCGGCCAAGAGCGAGGTCATTGCCGTTGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS CCA 72 bp AGGGTCACCACCCATTGTCTTCCGGTCCTGTGGCTTTaGCAGCACCTGAAGGTCGTCAAGTGCTGCCTCACT +
Preference number: 6 (lower is better)
Translates to: RVTTHCLPVLWL*QHLKVVKCCLT
Trigger: AGTGAGGCAGCACTTGACGACCTTCAGGTGCTGCCAAAGCCACAGGACCGGAAGACAATGGGTGGTGACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 72 bp AACTGCAAAGCCTTGATCCGGTCGCACACATTTTCTTaGGAGAACACCCGCACGGGCCGAGCAGGGTCCTGT +
Preference number: 6 (lower is better)
Translates to: NCKALIRSHTFS*ENTRTGRAGSC
Trigger: ACAGGACCCTGCTCGGCCCGTGCGGGTGTTCTCCCAAGAAAATGTGTGCGACCGGATCAAGGCTTTGCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS CCA 72 bp AAAGGTTGCAGGTCCCCCAAACTCAGGCCTTCTGCCTaGTATCAAATCCCGCTGCCTAGCGTCCGGGGTTTC +
Preference number: 6 (lower is better)
Translates to: KGCRSPKLRPSA*YQIPLPSVRGF
Trigger: GAAACCCCGGACGCTAGGCAGCGGGATTTGATACCAGGCAGAAGGCCTGAGTTTGGGGGACCTGCAACCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS CAA 72 bp CAGACTGCGCCCTCGAAGACAGCCGCCTCAGTTTACTaGATCGCTGGTTGCGGGGCTTCACCAGGAGTTTGT +
Preference number: 6 (lower is better)
Translates to: QTAPSKTAASVY*IAGCGASPGVC
Trigger: ACAAACTCCTGGTGAAGCCCCGCAACCAGCGATCAAGTAAACTGAGGCGGCTGTCTTCGAGGGCGCAGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS CAA 90 bp CTGAGTTTTGAGGGTCACCACCCATTGTCTTCCGGTCCTGTGGCTTaGGCAGCACCTGAAGGTCGTCAAGTGCTGCCTCACTCTTCCAGG +
Preference number: 6 (lower is better)
Translates to: LSFEGHHPLSSGPVA*AAPEGRQVLPHSSR
Trigger: CCTGGAAGAGTGAGGCAGCACTTGACGACCTTCAGGTGCTGCCAAAGCCACAGGACCGGAAGACAATGGGTGGTGACCCTCAAAACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CAA 90 bp ACGAAGTCACCCTGCTTCACAGACTCCTGGGCTCTCTCGGCCACCTaGGCTTGCTTCCCAGTTTCTGTCTTTAGGATCCTCGACCCAGGT +
Preference number: 6 (lower is better)
Translates to: TKSPCFTDSWALSAT*ACFPVSVFRILDPG
Trigger: ACCTGGGTCGAGGATCCTAAAGACAGAAACTGGGAAGCAAGCCAAGGTGGCCGAGAGAGCCCAGGAGTCTGTGAAGCAGGGTGACTTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CAA 90 bp GACTGCGCCCTCGAAGACAGCCGCCTCAGTTTACTTGATCGCTGGTaGCGGGGCTTCACCAGGAGTTTGTGTTTAGCTGCAGAGTTGTCC +
Preference number: 6 (lower is better)
Translates to: DCALEDSRLSLLDRW*RGFTRSLCLAAELS
Trigger: GGACAACTCTGCAGCTAAACACAAACTCCTGGTGAAGCCCCGCAACCAGCGATCAAGTAAACTGAGGCGGCTGTCTTCGAGGGCGCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS TCA 72 bp GATCTTCTTGGGAGGTGCCACATCTCCCTCGGGAGGTaGCATGTCTCTCTCTGGGGGTGCCATGATCCTCTT +
Preference number: 6 (lower is better)
Translates to: DLLGRCHISLGR*HVSLWGCHDPL
Trigger: AAGAGGATCATGGCACCCCCAGAGAGAGACATGTCACCTCCCGAGGGAGATGTGGCACCTCCCAAGAAGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS GCA 72 bp CACAGAAAACCTCTTAACGCTGCTGCGCTGTGGCTCTaGACTCCGCTCGTTCTTTCTCCCCAGGGCTGTTCT +
Preference number: 6 (lower is better)
Translates to: HRKPLNAAALWL*TPLVLSPQGCS
Trigger: AGAACAGCCCTGGGGAGAAAGAACGAGCGGAGTGCAGAGCCACAGCGCAGCAGCGTTAAGAGGTTTTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS GCA 72 bp GTCATCAGGAAAGATTTGCTCCGGACGAAGTCACCCTaGTTCACAGACTCCTGGGCTCTCTCGGCCACCTTG +
Preference number: 6 (lower is better)
Translates to: VIRKDLLRTKSP*FTDSWALSATL
Trigger: CAAGGTGGCCGAGAGAGCCCAGGAGTCTGTGAAGCAGGGTGACTTCGTCCGGAGCAAATCTTTCCTGATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS GCA 72 bp TCTAGGGTCCACGACAGGTCACTCAGGCACTCAGACTaGGCCCTCGAAGACAGCCGCCTCAGTTTACTTGAT +
Preference number: 6 (lower is better)
Translates to: SRVHDRSLRHSD*ALEDSRLSLLD
Trigger: ATCAAGTAAACTGAGGCGGCTGTCTTCGAGGGCGCAGTCTGAGTGCCTGAGTGACCTGTCGTGGACCCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS GCA 72 bp GTGTCTTTCAGAAAATGCTGGGTCTCCCTCAGGAGGTaGAGAGCCCTCCTTGGAAGGTCCCATGTCCCTCTC +
Preference number: 6 (lower is better)
Translates to: VSFRKCWVSLRR*RALLGRSHVPL
Trigger: GAGAGGGACATGGGACCTTCCAAGGAGGGCTCTGCACCTCCTGAGGGAGACCCAGCATTTTCTGAAAGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS GCA 72 bp ACCCCCTCCAGGGAATGCCATGTGTCTTTCAGAAAATaGTGGGTCTCCCTCAGGAGGTGCAGAGCCCTCCTT +
Preference number: 6 (lower is better)
Translates to: TPSRECHVSFRK*WVSLRRCRALL
Trigger: AAGGAGGGCTCTGCACCTCCTGAGGGAGACCCAGCATTTTCTGAAAGACACATGGCATTCCCTGGAGGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS CCA 72 bp CCTGCTTCACAGACTCCTGGGCTCTCTCGGCCACCTTaGCTTGCTTCCCAGTTTCTGTCTTTAGGATCCTCG +
Preference number: 6 (lower is better)
Translates to: PASQTPGLSRPP*LASQFLSLGSS
Trigger: CGAGGATCCTAAAGACAGAAACTGGGAAGCAAGCCAAGGTGGCCGAGAGAGCCCAGGAGTCTGTGAAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CAA 72 bp CCTCCTTTCTCCAACCTGACTTCGGCGCTGTACCTCTaGATGGCTTTGGCCTCTTGGGCAGAGCTGTCTCTG +
Preference number: 6 (lower is better)
Translates to: PPFSNLTSALYL*MALASWAELSL
Trigger: CAGAGACAGCTCTGCCCAAGAGGCCAAAGCCATCAAGAGGTACAGCGCCGAAGTCAGGTTGGAGAAAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CAA 72 bp GTCTTTAGGATCCTCGACCCAGGTTTCTCTTCCTGGTaGACGGGCAGGTCTGGGGCTCCTCTTCTCTTCTGC +
Preference number: 6 (lower is better)
Translates to: VFRILDPGFSSW*TGRSGAPLLFC
Trigger: GCAGAAGAGAAGAGGAGCCCCAGACCTGCCCGTCAACCAGGAAGAGAAACCTGGGTCGAGGATCCTAAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CAA 72 bp CCCTGCTTCACAGACTCCTGGGCTCTCTCGGCCACCTaGGCTTGCTTCCCAGTTTCTGTCTTTAGGATCCTC +
Preference number: 6 (lower is better)
Translates to: PCFTDSWALSAT*ACFPVSVFRIL
Trigger: GAGGATCCTAAAGACAGAAACTGGGAAGCAAGCCAAGGTGGCCGAGAGAGCCCAGGAGTCTGTGAAGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CAA 90 bp CGCTGGTTGCGGGGCTTCACCAGGAGTTTGTGTTTAGCTGCAGAGTaGTCCAGGCAGGAAGAGAATTCTGGAGGGTGGCTGAAGTCAACC +
Preference number: 6 (lower is better)
Translates to: RWLRGFTRSLCLAAE*SRQEENSGGWLKST
Trigger: GGTTGACTTCAGCCACCCTCCAGAATTCTCTTCCTGCCTGGACAACTCTGCAGCTAAACACAAACTCCTGGTGAAGCCCCGCAACCAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS TCA 72 bp GATCTTCTTGGGAGGTGCCACATCTCCCTCGGGAGGTaGCATGTCTCTCTCTGGGGGTGCCATGATCTTCTT +
Preference number: 6 (lower is better)
Translates to: DLLGRCHISLGR*HVSLWGCHDLL
Trigger: AAGAAGATCATGGCACCCCCAGAGAGAGACATGTCACCTCCCGAGGGAGATGTGGCACCTCCCAAGAAGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS TCA 72 bp CCTCAGAAGGTGACAAGTCTCTTTCTGGGGGTGCCATaGTCTTCTTGGGAGGTGCCACATCTCCTTCGGGAG +
Preference number: 6 (lower is better)
Translates to: PQKVTSLFLGVP*SSWEVPHLLRE
Trigger: CTCCCGAAGGAGATGTGGCACCTCCCAAGAAGATCATGGCACCCCCAGAAAGAGACTTGTCACCTTCTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS TCA 72 bp CATGGGCTCAGTAACTTCTGGCGTAGCTGGAAGGCTTaGGGGTTCATCTCTAGGACAGCCTCCCTCCTCCAT +
Preference number: 6 (lower is better)
Translates to: HGLSNFWRSWKA*GFISRTASLLH
Trigger: ATGGAGGAGGGAGGCTGTCCTAGAGATGAACCCTCAAGCCTTCCAGCTACGCCAGAAGTTACTGAGCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS TCA 72 bp ACTTTCTGGCAGAGATGGGGACTCCAAGCTTGGGACTaGGACCACCATGGGCTCAGTAACTTCTGGCGTAGC +
Preference number: 6 (lower is better)
Translates to: TFWQRWGLQAWD*DHHGLSNFWRS
Trigger: GCTACGCCAGAAGTTACTGAGCCCATGGTGGTCTCAGTCCCAAGCTTGGAGTCCCCATCTCTGCCAGAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS CCA 72 bp GCCCTCGAAGACAGCCGCCTCAGTTTACTTGATCGCTaGTTGCGGGGCTTCACCAGGAGTTTGTGTTTAGCT +
Preference number: 6 (lower is better)
Translates to: ALEDSRLSLLDR*LRGFTRSLCLA
Trigger: AGCTAAACACAAACTCCTGGTGAAGCCCCGCAACCAGCGATCAAGTAAACTGAGGCGGCTGTCTTCGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS CAA 72 bp CGGGGCTTCACCAGGAGTTTGTGTTTAGCTGCAGAGTaGTCCAGGCAGGAAGAGAATTCTGGAGGGTGGCTG +
Preference number: 6 (lower is better)
Translates to: RGFTRSLCLAAE*SRQEENSGGWL
Trigger: CAGCCACCCTCCAGAATTCTCTTCCTGCCTGGACAACTCTGCAGCTAAACACAAACTCCTGGTGAAGCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS TCA 72 bp GATCTTCTTGGGAGGTGCCACATCTCCCTCGGAAGGTaGCATGTCTCTCTCTGGGGGTGCCATGATCTTCTT +
Preference number: 6 (lower is better)
Translates to: DLLGRCHISLGR*HVSLWGCHDLL
Trigger: AAGAAGATCATGGCACCCCCAGAGAGAGACATGTCACCTTCCGAGGGAGATGTGGCACCTCCCAAGAAGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS TCA 72 bp GATCTTCTTGGGAGGTGCCACATCTCCTTCGGGAGGTaGCATGTCTCTCTCTGGGGGTGCCATGATCTTCTT +
Preference number: 6 (lower is better)
Translates to: DLLGRCHISFGR*HVSLWGCHDLL
Trigger: AAGAAGATCATGGCACCCCCAGAGAGAGACATGTCACCTCCCGAAGGAGATGTGGCACCTCCCAAGAAGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS TCA 72 bp GATTCCTTTGGGTGGTGCCATGTCACCCTTGAAAGGTaGCATGTCCCTCTCTGGGGGTGCCATGATCCTCTT +
Preference number: 6 (lower is better)
Translates to: DSFGWCHVTLER*HVPLWGCHDPL
Trigger: AAGAGGATCATGGCACCCCCAGAGAGGGACATGTCACCTTTCAAGGGTGACATGGCACCACCCAAAGGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS TCA 72 bp AGTTGTCCAGGCAGGAAGAGAATTCTGGAGGGTGGCTaGAGTCAACCACAGGAGCTAGGCTACCATCCAAGG +
Preference number: 6 (lower is better)
Translates to: SCPGRKRILEGG*SQPQELGYHPR
Trigger: CCTTGGATGGTAGCCTAGCTCCTGTGGTTGACTTCAGCCACCCTCCAGAATTCTCTTCCTGCCTGGACAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS TCA 72 bp GATCCTCTTGGGAGGTGCCATGTTGTCCTTGGAAGGTaGCATGTCTCTCTCGGGAGGTTCCATGACACCCTT +
Preference number: 6 (lower is better)
Translates to: DPLGRCHVVLGR*HVSLGRFHDTL
Trigger: AAGGGTGTCATGGAACCTCCCGAGAGAGACATGTCACCTTCCAAGGACAACATGGCACCTCCCAAGAGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS GCA 72 bp CTGGTTGCGGGGCTTCACCAGGAGTTTGTGTTTAGCTaGAGAGTTGTCCAGGCAGGAAGAGAATTCTGGAGG +
Preference number: 6 (lower is better)
Translates to: LVAGLHQEFVFS*RVVQAGREFWR
Trigger: CCTCCAGAATTCTCTTCCTGCCTGGACAACTCTGCAGCTAAACACAAACTCCTGGTGAAGCCCCGCAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS CAA 72 bp TCTGGAGGTGCTATGATCCTCTTGGGAGGTGCCATGTaGTCCTTGGAAGGTGACATGTCTCTCTCGGGAGGT +
Preference number: 6 (lower is better)
Translates to: SGGAMILLGGAM*SLEGDMSLSGG
Trigger: ACCTCCCGAGAGAGACATGTCACCTTCCAAGGACAACATGGCACCTCCCAAGAGGATCATAGCACCTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS CAA 90 bp CTATTAGGAGGCTCCATGATTCCTTTGGGTGGTGCCATGTCACCCTaGAAAGGTGACATGTCCCTCTCTGGGGGTGCCATGATCCTCTTG +
Preference number: 6 (lower is better)
Translates to: LLGGSMIPLGGAMSP*KGDMSLSGGAMILL
Trigger: CAAGAGGATCATGGCACCCCCAGAGAGGGACATGTCACCTTTCAAGGGTGACATGGCACCACCCAAAGGAATCATGGAGCCTCCTAATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CAA 90 bp AGAGCCAGGCCTCCTTTCTCCAACCTGACTTCGGCGCTGTACCTCTaGATGGCTTTGGCCTCTTGGGCAGAGCTGTCTCTGTATTTAAGT +
Preference number: 6 (lower is better)
Translates to: RARPPFSNLTSALYL*MALASWAELSLYLS
Trigger: ACTTAAATACAGAGACAGCTCTGCCCAAGAGGCCAAAGCCATCAAGAGGTACAGCGCCGAAGTCAGGTTGGAGAAAGGAGGCCTGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS GCA 72 bp GTTTCCTTCAGGAGGTATGCTACCCCCTCCAGGGAATaGCATGTGTCTTTCAGAAAATGCTGGGTCTCCCTC +
Preference number: 6 (lower is better)
Translates to: VSFRRYATPSRE*HVSFRKCWVSL
Trigger: GAGGGAGACCCAGCATTTTCTGAAAGACACATGGCATTCCCTGGAGGGGGTAGCATACCTCCTGAAGGAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS CCA 72 bp GTTCCATCCAGGATGGCTGATCTGTACTGGCGTAACTaGCCCTCTTCAGCTGATGAAGTTCCTTCTCTGTGG +
Preference number: 6 (lower is better)
Translates to: VPSRMADLYWRN*PSSADEVPSLW
Trigger: CCACAGAGAAGGAACTTCATCAGCTGAAGAGGGCCAGTTACGCCAGTACAGATCAGCCATCCTGGATGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 72 bp TTCTGGCGAGTTCCATCCAGGATGGCTGATCTGTACTaGCGTAACTGGCCCTCTTCAGCTGATGAAGTTCCT +
Preference number: 6 (lower is better)
Translates to: FWRVPSRMADLY*RNWPSSADEVP
Trigger: AGGAACTTCATCAGCTGAAGAGGGCCAGTTACGCCAGTACAGATCAGCCATCCTGGATGGAACTCGCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 72 bp GGCTTGAGATTTCTTTCTGGCGAGTTCCATCCAGGATaGCTGATCTGTACTGGCGTAACTGGCCCTCTTCAG +
Preference number: 6 (lower is better)
Translates to: GLRFLSGEFHPG*LICTGVTGPLQ
Trigger: CTGAAGAGGGCCAGTTACGCCAGTACAGATCAGCCATCCTGGATGGAACTCGCCAGAAAGAAATCTCAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 72 bp TCTTGGCCGGATTTTGCTTCCAGGCGCTGTTTCCTGTaGGTGAGGGGGATTCCTTTCTCTTCTTCTTCCCAA +
Preference number: 6 (lower is better)
Translates to: SWPDFASRRCFL*VRGIPFSSSSQ
Trigger: TTGGGAAGAAGAAGAGAAAGGAATCCCCCTCACCCACAGGAAACAGCGCCTGGAAGCAAAATCCGGCCAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS CAA 72 bp TTACTTGATCGCTGGTTGCGGGGCTTCACCAGGAGTTaGTGTTTAGCTGCAGAGTTGTCCAGGCAGGAAGAG +
Preference number: 6 (lower is better)
Translates to: LLDRWLRGFTRS*CLAAELSRQEE
Trigger: CTCTTCCTGCCTGGACAACTCTGCAGCTAAACACAAACTCCTGGTGAAGCCCCGCAACCAGCGATCAAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS CAA 90 bp CCTCCTTTCTCCAACCTGACTTCGGCGCTGTACCTCTTGATGGCTTaGGCCTCTTGGGCAGAGCTGTCTCTGTATTTAAGTGAGAGTGAG +
Preference number: 6 (lower is better)
Translates to: PPFSNLTSALYLLMA*ASWAELSLYLSESE
Trigger: CTCACTCTCACTTAAATACAGAGACAGCTCTGCCCAAGAGGCCAAAGCCATCAAGAGGTACAGCGCCGAAGTCAGGTTGGAGAAAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CAA 90 bp CGCCTCAGTTTACTTGATCGCTGGTTGCGGGGCTTCACCAGGAGTTaGTGTTTAGCTGCAGAGTTGTCCAGGCAGGAAGAGAATTCTGGA +
Preference number: 6 (lower is better)
Translates to: RLSLLDRWLRGFTRS*CLAAELSRQEENSG
Trigger: TCCAGAATTCTCTTCCTGCCTGGACAACTCTGCAGCTAAACACAAACTCCTGGTGAAGCCCCGCAACCAGCGATCAAGTAAACTGAGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS CAA 90 bp ATGTCTCTCTCTGGAGGTGCTATGATCCTCTTGGGAGGTGCCATGTaGTCCTTGGAAGGTGACATGTCTCTCTCGGGAGGTTCCATGACA +
Preference number: 6 (lower is better)
Translates to: MSLSGGAMILLGGAM*SLEGDMSLSGGSMT
Trigger: TGTCATGGAACCTCCCGAGAGAGACATGTCACCTTCCAAGGACAACATGGCACCTCCCAAGAGGATCATAGCACCTCCAGAGAGAGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS CAA 90 bp CCCTTTGGAAGTGATGTGTCCCTATTAGGAGGCTCCATGATTCCTTaGGGTGGTGCCATGTCACCCTTGAAAGGTGACATGTCCCTCTCT +
Preference number: 6 (lower is better)
Translates to: PFGSDVSLLGGSMIP*GGAMSPLKGDMSLS
Trigger: AGAGAGGGACATGTCACCTTTCAAGGGTGACATGGCACCACCCAAAGGAATCATGGAGCCTCCTAATAGGGACACATCACTTCCAAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS TCA 72 bp CCTCAGAAGGTAACATGTCTCTCTCTGGAGGTGCTATaGTCCTCTTGGGAGGTGCCATGTTGTCCTTGGAAG +
Preference number: 6 (lower is better)
Translates to: PQKVTCLSLEVL*SSWEVPCCPWK
Trigger: CTTCCAAGGACAACATGGCACCTCCCAAGAGGATCATAGCACCTCCAGAGAGAGACATGTTACCTTCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS CCA 72 bp AGGGGACACAGGCCTCCAGGGGACAGCTCTTCCTTCTaGCTCTTACTATGGAGAATATGGTTTGGAGAACTT +
Preference number: 6 (lower is better)
Translates to: RGHRPPGDSSSF*LLLWRIWFGEL
Trigger: AAGTTCTCCAAACCATATTCTCCATAGTAAGAGCCAGAAGGAAGAGCTGTCCCCTGGAGGCCTGTGTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS CAA 72 bp TCCAACCTGACTTCGGCGCTGTACCTCTTGATGGCTTaGGCCTCTTGGGCAGAGCTGTCTCTGTATTTAAGT +
Preference number: 6 (lower is better)
Translates to: SNLTSALYLLMA*ASWAELSLYLS
Trigger: ACTTAAATACAGAGACAGCTCTGCCCAAGAGGCCAAAGCCATCAAGAGGTACAGCGCCGAAGTCAGGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CAA 72 bp AGTGATGTGTCCCTATTAGGAGGCTCCATGATTCCTTaGGGTGGTGCCATGTCACCCTTGAAAGGTGACATG +
Preference number: 6 (lower is better)
Translates to: SDVSLLGGSMIP*GGAMSPLKGDM
Trigger: CATGTCACCTTTCAAGGGTGACATGGCACCACCCAAAGGAATCATGGAGCCTCCTAATAGGGACACATCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS TCA 72 bp GATAGTCTCAGGAGGTGGTGTGTCTCCCTTTGGAAGTaGTGTGTCCCTATTAGGAGGCTCCATGATTCCTTT +
Preference number: 6 (lower is better)
Translates to: DSLRRWCVSLWK*CVPIRRLHDSF
Trigger: AAAGGAATCATGGAGCCTCCTAATAGGGACACATCACTTCCAAAGGGAGACACACCACCTCCTGAGACTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 72 bp CCTCCAGGGGACAGCTCTTCCTTCTGGCTCTTACTATaGAGAATATGGTTTGGAGAACTTTCTGGCAGAGAT +
Preference number: 6 (lower is better)
Translates to: PPGDSSSFWLLL*RIWFGELSGRD
Trigger: ATCTCTGCCAGAAAGTTCTCCAAACCATATTCTCCATAGTAAGAGCCAGAAGGAAGAGCTGTCCCCTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS CAA 72 bp TGGTCCTGTCTCTCTGTATCTGAAGGTGTCTCCAAGTaGGTATCAGTGATAGTCTCAGGAGGTGGTGTGTCT +
Preference number: 6 (lower is better)
Translates to: WSCLSVSEGVSK*VSVIVSGGGVS
Trigger: AGACACACCACCTCCTGAGACTATCACTGATACCAACTTGGAGACACCTTCAGATACAGAGAGACAGGACCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS CCA 72 bp CTCTTCCTTCTGGCTCTTACTATGGAGAATATGGTTTaGAGAACTTTCTGGCAGAGATGGGGACTCCAAGCT +
Preference number: 6 (lower is better)
Translates to: LFLLALTMENMV*RTFWQRWGLQA
Trigger: AGCTTGGAGTCCCCATCTCTGCCAGAAAGTTCTCCAAACCATATTCTCCATAGTAAGAGCCAGAAGGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS TCA 72 bp TTCCTTCTGGACACTTTGGTCCTGTCTCTCTGTATCTaGAGGTGTCTCCAAGTTGGTATCAGTGATAGTCTC +
Preference number: 6 (lower is better)
Translates to: FLLDTLVLSLCI*RCLQVGISDSL
Trigger: GAGACTATCACTGATACCAACTTGGAGACACCTTCAGATACAGAGAGACAGGACCAAAGTGTCCAGAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000160023.6
ENSMUST00000162875.8
CDS TCA 72 bp TCTTCACGTTACATTGTATCTTTAACTGCAAAGCCTTaGTCCGGTCGCACACATTTTCTTGGGAGAACACCC +
Preference number: 6 (lower is better)
Translates to: SSRYIVSLTAKP*SGRTHFLGRTP
Trigger: GGGTGTTCTCCCAAGAAAATGTGTGCGACCGGATCAAGGCTTTGCAGTTAAAGATACAATGTAACGTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8
CDS CAA 72 bp ATCTTCACGTTACATTGTATCTTTAACTGCAAAGCCTaGATCCGGTCGCACACATTTTCTTGGGAGAACACC +
Preference number: 6 (lower is better)
Translates to: IFTLHCIFNCKA*IRSHTFSWENT
Trigger: GGTGTTCTCCCAAGAAAATGTGTGCGACCGGATCAAGGCTTTGCAGTTAAAGATACAATGTAACGTGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000162875.8