Pregenerated sensors for CR1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000016481Ensembl transcript IDs: ENSMUST00000075451.12, ENSMUST00000191775.2, ENSMUST00000193094.6, ENSMUST00000193829.2, ENSMUST00000194062.2, ENSMUST00000194111.6
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTCCCTAGCCTCTCACAGTGCCAAGCCTCAGCTGCTGTCCATGACTaGTTCATACATTCAAAACCAGTACTACCTGGGTGGTTCTTACAC | + |
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Preference number: 1 (lower is better) Translates to: FPSLSQCQASAAVHD*FIHSKPVLPGWFLH Trigger: GTGTAAGAACCACCCAGGTAGTACTGGTTTTGAATGTATGAAGCAGTCATGGACAGCAGCTGAGGCTTGGCACTGTGAGAGGCTAGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| 3UTR CCA 90 bp | GGTTCTTACACACTACAAGTTCAGCTGCAGCACCGGGTACAACTCTaGCTATCTCTGGAACACAGATTCTTTGTGCTCTCACAAAAGGCT | + |
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Preference number: 1 (lower is better) Translates to: GSYTLQVQLQHRVQL*LSLEHRFFVLSQKA Trigger: AGCCTTTTGTGAGAGCACAAAGAATCTGTGTTCCAGAGATAGCCAGAGTTGTACCCGGTGCTGCAGCTGAACTTGTAGTGTGTAAGAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| 3UTR CCA 90 bp | GCTGTCCATGACTGCTTCATACATTCAAAACCAGTACTACCTGGGTaGTTCTTACACACTACAAGTTCAGCTGCAGCACCGGGTACAACT | + |
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Preference number: 1 (lower is better) Translates to: AVHDCFIHSKPVLPG*FLHTTSSAAAPGTT Trigger: AGTTGTACCCGGTGCTGCAGCTGAACTTGTAGTGTGTAAGAACCACCCAGGTAGTACTGGTTTTGAATGTATGAAGCAGTCATGGACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| 3UTR CCA 90 bp | CTTTGTCTCCTGAATCCTAGGGTCAAAGGTGTGTACCACCATGCCTaGACTGAAGCTTTTCTCTACTTGAAACTTTCTCTATACCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: LCLLNPRVKGVYHHA*TEAFLYLKLSLYQA Trigger: AGCCTGGTATAGAGAAAGTTTCAAGTAGAGAAAAGCTTCAGTCCAGGCATGGTGGTACACACCTTTGACCCTAGGATTCAGGAGACAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| 3UTR TCA 90 bp | TCAAAGGTGTGTACCACCATGCCTGGACTGAAGCTTTTCTCTACTTaGAACTTTCTCTATACCAGGCTAGCCTTGAACTCAAAGATCTGC | + |
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Preference number: 1 (lower is better) Translates to: SKVCTTMPGLKLFST*NFLYTRLALNSKIC Trigger: GCAGATCTTTGAGTTCAAGGCTAGCCTGGTATAGAGAAAGTTTCAAGTAGAGAAAAGCTTCAGTCCAGGCATGGTGGTACACACCTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| 3UTR GCA 90 bp | TCAGCACTCGTCCAGGTTGAGTCTTGTTTGCAGGTGATAGAGAACTaGCTCTTGATATATCCTGGGAGACATTCATACAACAAATATGTT | + |
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Preference number: 1 (lower is better) Translates to: SALVQVESCLQVIEN*LLIYPGRHSYNKYV Trigger: AACATATTTGTTGTATGAATGTCTCCCAGGATATATCAAGAGGCAGTTCTCTATCACCTGCAAACAAGACTCAACCTGGACGAGTGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193829.2 |
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| 3UTR GCA 90 bp | CCACTCCTTCTTAAGCATAGCATTCAGCTCCATTTCACTTCCTGGTaGCCCTTTATTACTGTACACTTTGTACTTTTCCTTTTAGAGCTT | + |
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Preference number: 1 (lower is better) Translates to: PLLLKHSIQLHFTSW*PFITVHFVLFLLEL Trigger: AAGCTCTAAAAGGAAAAGTACAAAGTGTACAGTAATAAAGGGGCACCAGGAAGTGAAATGGAGCTGAATGCTATGCTTAAGAAGGAGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| 3UTR CCA 90 bp | ACCATGACCAAGACAACTCTTATAAGAGAAGCATTTAATTGGGGTTaGCTTACAGGTTCAGAGGTTCAGTCCATTATGATCAAGGCAGAA | + |
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Preference number: 1 (lower is better) Translates to: TMTKTTLIREAFNWG*LTGSEVQSIMIKAE Trigger: TTCTGCCTTGATCATAATGGACTGAACCTCTGAACCTGTAAGCCAACCCCAATTAAATGCTTCTCTTATAAGAGTTGTCTTGGTCATGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193094.6 ENSMUST00000194111.6 |
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| 3UTR TCA 90 bp | CCCAAATCTACATTCTTCCAAAGAAAAGGATGGTCAAGCCTATCATaGCAATACTCACTCCTGATACCAACTTCTGTCTTAGTTAGGGTT | + |
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Preference number: 1 (lower is better) Translates to: PKSTFFQRKGWSSLS*QYSLLIPTSVLVRV Trigger: AACCCTAACTAAGACAGAAGTTGGTATCAGGAGTGAGTATTGTCATGATAGGCTTGACCATCCTTTTCTTTGGAAGAATGTAGATTTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| 3UTR TCA 90 bp | TCACTCCTGATACCAACTTCTGTCTTAGTTAGGGTTTTATTGCTGTaGACAGACACCATGACCAAGACAACTCTTATAAGAGAAGCATTT | + |
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Preference number: 1 (lower is better) Translates to: SLLIPTSVLVRVLLL*TDTMTKTTLIREAF Trigger: AAATGCTTCTCTTATAAGAGTTGTCTTGGTCATGGTGTCTGTTCACAGCAATAAAACCCTAACTAAGACAGAAGTTGGTATCAGGAGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| 3UTR-3UTR CCA 90 bp | CAGTACCAGGCCTTCCCTAGCCTCTCACAGTGCCAAGCCTCAGCTGCTGTCCATTTTCACTTCAGTCACTaGTCTCTTCTTAATCACCAC | + |
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Preference number: 2 (lower is better) Translates to: QYQAFPSLSQCQASAAVHFHFSH*SLLNHH Trigger: GTGGTGATTAAGAAGAGACCAGTGACTGAAGTGAAA...ATGGACAGCAGCTGAGGCTTGGCACTGTGAGAGGCTAGGGAAGGCCTGGTACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| 3UTR CAA 90 bp | ATAACCTCTCATAGGCTCTCTTCATGGTGCCAAGCCTCAACTTCTTaGAATGACACCTTCAGTACCAGGCCTTCCCTAGCCTCTCACAGT | + |
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Preference number: 2 (lower is better) Translates to: ITSHRLSSWCQASTS*NDTFSTRPSLASHS Trigger: ACTGTGAGAGGCTAGGGAAGGCCTGGTACTGAAGGTGTCATTCAAAGAAGTTGAGGCTTGGCACCATGAAGAGAGCCTATGAGAGGTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| 3UTR-3UTR CCA 90 bp | GGTCATCCCATGGTACTGGCATCTCCAATATGCTGGGCTTTCCTGCTGCAAGTAAACTCTGGCTATCTCTaGAACACAGATTCTTTGTGC | + |
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Preference number: 2 (lower is better) Translates to: GHPMVLASPICWAFLLQVNSGYL*NTDSLC Trigger: GCACAAAGAATCTGTGTTCCAGAGATAGCCAGAGTT...TACTTGCAGCAGGAAAGCCCAGCATATTGGAGATGCCAGTACCATGGGATGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| 3UTR-3UTR TCA 90 bp | AGCTGCAGCACCGGGTACAACTCTGGCTATCTCTGGAACACAGATTCTTTGTGCAAGCTTTTCTCTACTTaGAACTTTCTCTATACCAGG | + |
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Preference number: 2 (lower is better) Translates to: SCSTGYNSGYLWNTDSLCKLFST*NFLYTR Trigger: CCTGGTATAGAGAAAGTTTCAAGTAGAGAAAAGCTT...GCACAAAGAATCTGTGTTCCAGAGATAGCCAGAGTTGTACCCGGTGCTGCAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| 3UTR-3UTR TCA 90 bp | TCTCCAATATGCTGGGCTTTCCTGCTGCAAGTAGGATTCATCAATAACCTCTCAGAAGCTGCCAAGTTCTaGTGCTTGCTTGAGCTTGAA | + |
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Preference number: 2 (lower is better) Translates to: SPICWAFLLQVGFINNLSEAAKF*CLLELE Trigger: TTCAAGCTCAAGCAAGCATCAGAACTTGGCAGCTTC...TGAGAGGTTATTGATGAATCCTACTTGCAGCAGGAAAGCCCAGCATATTGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| 3UTR CAA 90 bp | GTCAAAGGTGTGTACCACCATGCCTGGACTGAAGCTTTTCTCTACTaGAAACTTTCTCTATACCAGGCTAGCCTTGAACTCAAAGATCTG | + |
|
Preference number: 2 (lower is better) Translates to: VKGVYHHAWTEAFLY*KLSLYQASLELKDL Trigger: CAGATCTTTGAGTTCAAGGCTAGCCTGGTATAGAGAAAGTTTCAAGTAGAGAAAAGCTTCAGTCCAGGCATGGTGGTACACACCTTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| 3UTR-3UTR TCA 90 bp | TCATCAATAACCTCTCATAGGCTCTCTTCATGGTGCCAAGCCTCAACTTCTTTGAGGGTTTTATTGCTGTaGACAGACACCATGACCAAG | + |
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Preference number: 2 (lower is better) Translates to: SSITSHRLSSWCQASTSLRVLLL*TDTMTK Trigger: CTTGGTCATGGTGTCTGTTCACAGCAATAAAACCCT...CAAAGAAGTTGAGGCTTGGCACCATGAAGAGAGCCTATGAGAGGTTATTGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| 3UTR-3UTR CCA 90 bp | AAGACAACTCTTATAAGAGAAGCATTTAATTGGGGTTGGCTTACAGGTTCAGAGATCAAGGCAGAAGCATaGCAGTGTCCAGGCAGACAT | + |
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Preference number: 2 (lower is better) Translates to: KTTLIREAFNWGWLTGSEIKAEA*QCPGRH Trigger: ATGTCTGCCTGGACACTGCCATGCTTCTGCCTTGAT...CTCTGAACCTGTAAGCCAACCCCAATTAAATGCTTCTCTTATAAGAGTTGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193094.6 ENSMUST00000194111.6 |
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| 3UTR-3UTR CCA 90 bp | TCATCAATAACCTCTCATAGGCTCTCTTCATGGTGCCAAGCCTCAACTTCTTTGACAGTAGCAGTCTCTTaGCCACATACTGAAATTCTT | + |
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Preference number: 2 (lower is better) Translates to: SSITSHRLSSWCQASTSLTVAVS*PHTEIL Trigger: AAGAATTTCAGTATGTGGCCAAGAGACTGCTACTGT...CAAAGAAGTTGAGGCTTGGCACCATGAAGAGAGCCTATGAGAGGTTATTGATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| 3UTR-3UTR TCA 90 bp | ATTCAGCTCCATTTCACTTCCTGGTGCCCCTTTATTACTGTACACTTTGTACTTCTCTTGGCCACATACTaGAATTCTTCTCCTCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: IQLHFTSWCPFITVHFVLLLATY*NSSPLK Trigger: TTTCAGAGGAGAAGAATTTCAGTATGTGGCCAAGAG...AAGTACAAAGTGTACAGTAATAAAGGGGCACCAGGAAGTGAAATGGAGCTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| 3UTR-3UTR CCA 90 bp | TTCTGTCTCTTTGGATTAAGATGTATTACCATCATGTTTGGACCTACCTTCGCTCTCAGGCAGACTATTTaGACAATGGCAAAAAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: FCLFGLRCITIMFGPTFALRQTI*TMAKSR Trigger: TCTGCTTTTTGCCATTGTCCAAATAGTCTGCCTGAG...AGCGAAGGTAGGTCCAAACATGATGGTAATACATCTTAATCCAAAGAGACAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| 3UTR-3UTR CCA 90 bp | TCCTTCTGTCTCTTTGGATTAAGATGTATTACCATCATGTTTGGACCTACCTTCCTCCATTTCACTTCCTaGTGCCCCTTTATTACTGTA | + |
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Preference number: 2 (lower is better) Translates to: SFCLFGLRCITIMFGPTFLHFTS*CPFITV Trigger: TACAGTAATAAAGGGGCACCAGGAAGTGAAATGGAG...GAAGGTAGGTCCAAACATGATGGTAATACATCTTAATCCAAAGAGACAGAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| 3UTR-3UTR CCA 90 bp | ATTGTTTTCGTATACACTTATCTTCAGCACTCGTCCAGGTTGAGTCTTGTTTGCCCTCTTGATATATCCTaGGAGACATTCATACAACAA | + |
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Preference number: 2 (lower is better) Translates to: IVFVYTYLQHSSRLSLVCPLDIS*ETFIQQ Trigger: TTGTTGTATGAATGTCTCCCAGGATATATCAAGAGG...GCAAACAAGACTCAACCTGGACGAGTGCTGAAGATAAGTGTATACGAAAACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193829.2 |
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| 3UTR TCA 72 bp | GGGGTTGGCTTACAGGTTCAGAGGTTCAGTCCATTATaGTCAAGGCAGAAGCATGGCAGTGTCCAGGCAGAC | + |
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Preference number: 3 (lower is better) Translates to: GVGLQVQRFSPL*SRQKHGSVQAD Trigger: GTCTGCCTGGACACTGCCATGCTTCTGCCTTGATCATAATGGACTGAACCTCTGAACCTGTAAGCCAACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193094.6 ENSMUST00000194111.6 |
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| 3UTR CCA 72 bp | TCAGAGGTTCAGTCCATTATGATCAAGGCAGAAGCATaGCAGTGTCCAGGCAGACATGGCGGAGGAGGAGAT | + |
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Preference number: 3 (lower is better) Translates to: SEVQSIMIKAEA*QCPGRHGGGGD Trigger: ATCTCCTCCTCCGCCATGTCTGCCTGGACACTGCCATGCTTCTGCCTTGATCATAATGGACTGAACCTCTGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193094.6 ENSMUST00000194111.6 |
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| 3UTR GCA 72 bp | CTCTCACAGTGCCAAGCCTCAGCTGCTGTCCATGACTaGTTCATACATTCAAAACCAGTACTACCTGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: LSQCQASAAVHD*FIHSKPVLPGW Trigger: CCACCCAGGTAGTACTGGTTTTGAATGTATGAAGCAGTCATGGACAGCAGCTGAGGCTTGGCACTGTGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| 3UTR CCA 72 bp | ACACTACAAGTTCAGCTGCAGCACCGGGTACAACTCTaGCTATCTCTGGAACACAGATTCTTTGTGCTCTCA | + |
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Preference number: 3 (lower is better) Translates to: TLQVQLQHRVQL*LSLEHRFFVLS Trigger: TGAGAGCACAAAGAATCTGTGTTCCAGAGATAGCCAGAGTTGTACCCGGTGCTGCAGCTGAACTTGTAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| 3UTR CCA 72 bp | GGTGGTCATCCCATGGTACTGGCATCTCCAATATGCTaGGCTTTCCTGCTGCAAGTAGGATTCATCAATAAC | + |
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Preference number: 3 (lower is better) Translates to: GGHPMVLASPIC*AFLLQVGFINN Trigger: GTTATTGATGAATCCTACTTGCAGCAGGAAAGCCCAGCATATTGGAGATGCCAGTACCATGGGATGACCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| 3UTR CCA 72 bp | GACTGCTTCATACATTCAAAACCAGTACTACCTGGGTaGTTCTTACACACTACAAGTTCAGCTGCAGCACCG | + |
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Preference number: 3 (lower is better) Translates to: DCFIHSKPVLPG*FLHTTSSAAAP Trigger: CGGTGCTGCAGCTGAACTTGTAGTGTGTAAGAACCACCCAGGTAGTACTGGTTTTGAATGTATGAAGCAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| 3UTR CCA 72 bp | CTGTCTCTTTGGATTAAGATGTATTACCATCATGTTTaGACCTACCTTCGCTGGGTGGGATCTTGCCCCAAA | + |
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Preference number: 3 (lower is better) Translates to: LSLWIKMYYHHV*TYLRWVGSCPK Trigger: TTTGGGGCAAGATCCCACCCAGCGAAGGTAGGTCCAAACATGATGGTAATACATCTTAATCCAAAGAGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| 3UTR TCA 72 bp | TGTACCACCATGCCTGGACTGAAGCTTTTCTCTACTTaGAACTTTCTCTATACCAGGCTAGCCTTGAACTCA | + |
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Preference number: 3 (lower is better) Translates to: CTTMPGLKLFST*NFLYTRLALNS Trigger: TGAGTTCAAGGCTAGCCTGGTATAGAGAAAGTTTCAAGTAGAGAAAAGCTTCAGTCCAGGCATGGTGGTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| 3UTR CCA 72 bp | CTGAATCCTAGGGTCAAAGGTGTGTACCACCATGCCTaGACTGAAGCTTTTCTCTACTTGAAACTTTCTCTA | + |
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Preference number: 3 (lower is better) Translates to: LNPRVKGVYHHA*TEAFLYLKLSL Trigger: TAGAGAAAGTTTCAAGTAGAGAAAAGCTTCAGTCCAGGCATGGTGGTACACACCTTTGACCCTAGGATTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| 3UTR GCA 72 bp | AATTCTTCTCCTCTGAAACCTCTAGAGTTTCAACAGTaGAAATCACCCTCAGCACCAAAGTCTTCCATATTT | + |
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Preference number: 3 (lower is better) Translates to: NSSPLKPLEFQQ*KSPSAPKSSIF Trigger: AAATATGGAAGACTTTGGTGCTGAGGGTGATTTGCACTGTTGAAACTCTAGAGGTTTCAGAGGAGAAGAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| 3UTR CCA 72 bp | TTTGCAGGTGATAGAGAACTGCCTCTTGATATATCCTaGGAGACATTCATACAACAAATATGTTCCAATGGG | + |
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Preference number: 3 (lower is better) Translates to: FAGDRELPLDIS*ETFIQQICSNG Trigger: CCCATTGGAACATATTTGTTGTATGAATGTCTCCCAGGATATATCAAGAGGCAGTTCTCTATCACCTGCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193829.2 |
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| 3UTR-3UTR CAA 90 bp | ATGACTGCTTCATACATTCAAAACCAGTACTACCTGGGTGGTTCTTACACACTAGAAGCTTTTCTCTACTaGAAACTTTCTCTATACCAG | + |
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Preference number: 3 (lower is better) Translates to: MTASYIQNQYYLGGSYTLEAFLY*KLSLYQ Trigger: CTGGTATAGAGAAAGTTTCAAGTAGAGAAAAGCTTC...TAGTGTGTAAGAACCACCCAGGTAGTACTGGTTTTGAATGTATGAAGCAGTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| 3UTR GCA 72 bp | TTTCTCTATACCAGGCTAGCCTTGAACTCAAAGATCTaGTTCCTTCTGTCTCTTTGGATTAAGATGTATTAC | + |
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Preference number: 3 (lower is better) Translates to: FLYTRLALNSKI*FLLSLWIKMYY Trigger: GTAATACATCTTAATCCAAAGAGACAGAAGGAAGCAGATCTTTGAGTTCAAGGCTAGCCTGGTATAGAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| 3UTR CCA 72 bp | AAGACAACTCTTATAAGAGAAGCATTTAATTGGGGTTaGCTTACAGGTTCAGAGGTTCAGTCCATTATGATC | + |
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Preference number: 3 (lower is better) Translates to: KTTLIREAFNWG*LTGSEVQSIMI Trigger: GATCATAATGGACTGAACCTCTGAACCTGTAAGCCAACCCCAATTAAATGCTTCTCTTATAAGAGTTGTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193094.6 ENSMUST00000194111.6 |
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| 3UTR TCA 72 bp | TCAAAATTTTACAGTAGCAGTCTCTTGGCCACATACTaGAATTCTTCTCCTCTGAAACCTCTAGAGTTTCAA | + |
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Preference number: 3 (lower is better) Translates to: SKFYSSSLLATY*NSSPLKPLEFQ Trigger: TTGAAACTCTAGAGGTTTCAGAGGAGAAGAATTTCAGTATGTGGCCAAGAGACTGCTACTGTAAAATTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| CDS-3UTR TCA 90 bp | TATGATCAAGGCAGAAGCATGGCAGTGTCCAGGCAGACATGGCGGAGGAGGAGACTTGTGAGCAGAGACTaGAGGCGGACACAGCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: YDQGRSMAVSRQTWRRRRLVSRD*RRTQLS Trigger: AGACAGCTGTGTCCGCCTTCAGTCTCTGCTCACAAG...TCTCCTCCTCCGCCATGTCTGCCTGGACACTGCCATGCTTCTGCCTTGATCATA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| CDS-3UTR TCA 90 bp | ATCAAGGCAGAAGCATGGCAGTGTCCAGGCAGACATGGCGGAGGAGGAGATGAGTGTTCTCCTGACTTGTaGGCAGAGACTGAAGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: IKAEAWQCPGRHGGGGDECSPDL*AETEGG Trigger: TCCGCCTTCAGTCTCTGCTCACAAGTCAGGAGAACA...CTCATCTCCTCCTCCGCCATGTCTGCCTGGACACTGCCATGCTTCTGCCTTGAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| CDS-3UTR GCA 90 bp | ATCAAGGCAGAAGCATGGCAGTGTCCAGGCAGACATGGCGGAGGAGGAGATGAGAATCTCCATTGGGAATaGCTGGGGGTATCTCACAAG | + |
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Preference number: 4 (lower is better) Translates to: IKAEAWQCPGRHGGGGDENLHWE*LGVSHK Trigger: CTTGTGAGATACCCCCAGGCATTCCCAATGGAGATT...CTCATCTCCTCCTCCGCCATGTCTGCCTGGACACTGCCATGCTTCTGCCTTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000193094.6 ENSMUST00000194111.6 |
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| CDS-3UTR TCA 90 bp | TATGATCAAGGCAGAAGCATGGCAGTGTCCAGGCAGACATGGCGGAGGAGGAGACATTTGTTTAGGGACTaGCAATGCACACTGCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: YDQGRSMAVSRQTWRRRRHLFRD*QCTLLA Trigger: AGCCAGCAGTGTGCATTGTCAGTCCCTAAACAAATG...TCTCCTCCTCCGCCATGTCTGCCTGGACACTGCCATGCTTCTGCCTTGATCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193094.6 ENSMUST00000194111.6 |
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| CDS-3UTR TCA 90 bp | GTTTTACATTGTTTTCGTATACACTTATCTTCAGCACTCGTCCAGGTTGAGTCTGATGGGGCTGGGCAGTaGCAGGCAGCCCAGACCAGC | + |
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Preference number: 4 (lower is better) Translates to: VLHCFRIHLSSALVQVESDGAGQ*QAAQTS Trigger: GCTGGTCTGGGCTGCCTGTCACTGCCCAGCCCCATC...AGACTCAACCTGGACGAGTGCTGAAGATAAGTGTATACGAAAACAATGTAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000193829.2 |
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| CDS-3UTR GCA 90 bp | TATGATCAAGGCAGAAGCATGGCAGTGTCCAGGCAGACATGGCGGAGGAGGAGAGGGATCCAAACTGAATaGCTGTGTGTACATGTACCA | + |
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Preference number: 4 (lower is better) Translates to: YDQGRSMAVSRQTWRRRRGIQTE*LCVHVP Trigger: TGGTACATGTACACACAGGCATTCAGTTTGGATCCC...TCTCCTCCTCCGCCATGTCTGCCTGGACACTGCCATGCTTCTGCCTTGATCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193094.6 ENSMUST00000194111.6 |
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| 3UTR CAA 72 bp | CATAGGCTCTCTTCATGGTGCCAAGCCTCAACTTCTTaGAATGACACCTTCAGTACCAGGCCTTCCCTAGCC | + |
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Preference number: 4 (lower is better) Translates to: HRLSSWCQASTS*NDTFSTRPSLA Trigger: GGCTAGGGAAGGCCTGGTACTGAAGGTGTCATTCAAAGAAGTTGAGGCTTGGCACCATGAAGAGAGCCTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| CDS-3UTR TCA 90 bp | TCATCAATAACCTCTCATAGGCTCTCTTCATGGTGCCAAGCCTCAACTTCTTTGCGGATCCAGAGGCTCTaGACTCCGAGAAGAGACCTC | + |
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Preference number: 4 (lower is better) Translates to: SSITSHRLSSWCQASTSLRIQRL*TPRRDL Trigger: GAGGTCTCTTCTCGGAGTTCAGAGCCTCTGGATCCG...CAAAGAAGTTGAGGCTTGGCACCATGAAGAGAGCCTATGAGAGGTTATTGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| CDS-3UTR TCA 90 bp | ATTCAGCTCCATTTCACTTCCTGGTGCCCCTTTATTACTGTACACTTTGTACTTGGCAGAAGGAAGCTGTaGTGGGGCTGGGCAGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: IQLHFTSWCPFITVHFVLGRRKL*WGWAVT Trigger: GGTCACTGCCCAGCCCCATCACAGCTTCCTTCTGCC...AAGTACAAAGTGTACAGTAATAAAGGGGCACCAGGAAGTGAAATGGAGCTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
||
| CDS-3UTR TCA 90 bp | AGCTGCAGCACCGGGTACAACTCTGGCTATCTCTGGAACACAGATTCTTTGTGCGACATATCACTCCCTTaGAGCAGCTTGGTAACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SCSTGYNSGYLWNTDSLCDISLP*SSLVTL Trigger: CAGAGTTACCAAGCTGCTTCAAGGGAGTGATATGTC...GCACAAAGAATCTGTGTTCCAGAGATAGCCAGAGTTGTACCCGGTGCTGCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
||
| CDS-3UTR TCA 90 bp | CTTATAAGAGAAGCATTTAATTGGGGTTGGCTTACAGGTTCAGAGGTTCAGTCCGATGGGGCTGGGCAGTaGCCCAAAGTAAATGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LIREAFNWGWLTGSEVQSDGAGQ*PKVNGS Trigger: GCTGCCATTTACTTTGGGTCACTGCCCAGCCCCATC...GGACTGAACCTCTGAACCTGTAAGCCAACCCCAATTAAATGCTTCTCTTATAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
||
| CDS-3UTR TCA 90 bp | ACCATGACCAAGACAACTCTTATAAGAGAAGCATTTAATTGGGGTTGGCTTACAGGCAGAAGGAAGCTGTaGTGGGGCTGGGCAGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: TMTKTTLIREAFNWGWLTGRRKL*WGWAVT Trigger: GGTCACTGCCCAGCCCCATCACAGCTTCCTTCTGCC...TGTAAGCCAACCCCAATTAAATGCTTCTCTTATAAGAGTTGTCTTGGTCATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000193094.6 ENSMUST00000194111.6 |
||
| CDS-3UTR TCA 90 bp | ATCAAGGCAGAAGCATGGCAGTGTCCAGGCAGACATGGCGGAGGAGGAGATGAGAAAGTCTTCTCTGGTTaGACTGAAGAAATCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: IKAEAWQCPGRHGGGGDEKVFSG*TEEISI Trigger: AATGGAGATTTCTTCAGTTCAACCAGAGAAGACTTT...CTCATCTCCTCCTCCGCCATGTCTGCCTGGACACTGCCATGCTTCTGCCTTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193094.6 ENSMUST00000194111.6 |
||
| CDS-3UTR TCA 90 bp | ATTGTTTTCGTATACACTTATCTTCAGCACTCGTCCAGGTTGAGTCTTGTTTGCCGGATCCAGAGGCTCTaGACTCCGAGAAGAGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: IVFVYTYLQHSSRLSLVCRIQRL*TPRRDL Trigger: GAGGTCTCTTCTCGGAGTTCAGAGCCTCTGGATCCG...GCAAACAAGACTCAACCTGGACGAGTGCTGAAGATAAGTGTATACGAAAACAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193829.2 |
||
| CDS-3UTR TCA 90 bp | TACATTGTTTTCGTATACACTTATCTTCAGCACTCGTCCAGGTTGAGTCTTGTTGGCAGAAGGAAGCTGTaGTGGGGCTGGGCAGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: YIVFVYTYLQHSSRLSLVGRRKL*WGWAVT Trigger: TGTCACTGCCCAGCCCCATCACAGCTTCCTTCTGCC...AACAAGACTCAACCTGGACGAGTGCTGAAGATAAGTGTATACGAAAACAATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193829.2 |
||
| CDS-3UTR CCA 90 bp | ATCAAGGCAGAAGCATGGCAGTGTCCAGGCAGACATGGCGGAGGAGGAGATGAGACAAATATGTTCCAATaGGAAACATGGATTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: IKAEAWQCPGRHGGGGDETNMFQ*ETWIHQ Trigger: CTGATGAATCCATGTTTCCCATTGGAACATATTTGT...CTCATCTCCTCCTCCGCCATGTCTGCCTGGACACTGCCATGCTTCTGCCTTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193094.6 ENSMUST00000194111.6 |
||
| CDS-3UTR TCA 90 bp | GTTTATTTTAAAAGTGATACAGACAGAGCATGTTCTCATTTCACGTTGCTGCTAGGCAGAAGGAAGCTGTaGTGGGGCTGGGCAGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: VYFKSDTDRACSHFTLLLGRRKL*WGWAVT Trigger: GGTCACTGCCCAGCCCCATCACAGCTTCCTTCTGCC...TAGCAGCAACGTGAAATGAGAACATGCTCTGTCTGTATCACTTTTAAAATAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075451.12 |
||
| CDS-3UTR TCA 90 bp | CAGTTTATTTTAAAAGTGATACAGACAGAGCATGTTCTCATTTCACGTTGCTGCCGGATCCAGAGGCTCTaGACTCCGAGAAGAGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: QFILKVIQTEHVLISRCCRIQRL*TPRRDL Trigger: GAGGTCTCTTCTCGGAGTTCAGAGCCTCTGGATCCG...GCAGCAACGTGAAATGAGAACATGCTCTGTCTGTATCACTTTTAAAATAAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075451.12 |
||
| CDS-3UTR TCA 90 bp | AGCTGCAGCACCGGGTACAACTCTGGCTATCTCTGGAACACAGATTCTTTGTGCAAAGTCTTCTCTGGTTaGACTGAAGAAATCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: SCSTGYNSGYLWNTDSLCKVFSG*TEEISI Trigger: AATGGAGATTTCTTCAGTTCAACCAGAGAAGACTTT...GCACAAAGAATCTGTGTTCCAGAGATAGCCAGAGTTGTACCCGGTGCTGCAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
||
| CDS-3UTR TCA 90 bp | GTTTATTTTAAAAGTGATACAGACAGAGCATGTTCTCATTTCACGTTGCTGCTAGATGGGGCTGGGCAGTaGCCCAAAGTAAATGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VYFKSDTDRACSHFTLLLDGAGQ*PKVNGS Trigger: GCTGCCATTTACTTTGGGTCACTGCCCAGCCCCATC...TAGCAGCAACGTGAAATGAGAACATGCTCTGTCTGTATCACTTTTAAAATAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075451.12 |
||
| CDS-3UTR TCA 90 bp | GTTTATTTTAAAAGTGATACAGACAGAGCATGTTCTCATTTCACGTTGCTGCTACTTGTGAGCAGAGACTaGAGGCGGACACAGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VYFKSDTDRACSHFTLLLLVSRD*RRTQLS Trigger: AGACAGCTGTGTCCGCCTTCAGTCTCTGCTCACAAG...TAGCAGCAACGTGAAATGAGAACATGCTCTGTCTGTATCACTTTTAAAATAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075451.12 |
||
| CDS-3UTR TCA 90 bp | TTTCAACAGTGCAAATCACCCTCAGCACCAAAGTCTTCCATATTTCTACTAGAACATTTGTTTAGGGACTaGCAATGCACACTGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FQQCKSPSAPKSSIFLLEHLFRD*QCTLLA Trigger: AGCCAGCAGTGTGCATTGTCAGTCCCTAAACAAATG...TTCTAGTAGAAATATGGAAGACTTTGGTGCTGAGGGTGATTTGCACTGTTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
||
| CDS-3UTR TCA 90 bp | ACCATGACCAAGACAACTCTTATAAGAGAAGCATTTAATTGGGGTTGGCTTACAGACATATCACTCCCTTaGAGCAGCTTGGTAACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TMTKTTLIREAFNWGWLTDISLP*SSLVTL Trigger: CAGAGTTACCAAGCTGCTTCAAGGGAGTGATATGTC...TGTAAGCCAACCCCAATTAAATGCTTCTCTTATAAGAGTTGTCTTGGTCATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193094.6 ENSMUST00000194111.6 |
||
| CDS-3UTR TCA 90 bp | GTTTATTTTAAAAGTGATACAGACAGAGCATGTTCTCATTTCACGTTGCTGCTATGTTCTCCTGACTTGTaGGCAGAGACTGAAGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: VYFKSDTDRACSHFTLLLCSPDL*AETEGG Trigger: TCCGCCTTCAGTCTCTGCTCACAAGTCAGGAGAACA...TAGCAGCAACGTGAAATGAGAACATGCTCTGTCTGTATCACTTTTAAAATAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075451.12 |
||
| CDS-3UTR TCA 90 bp | CAGTTTATTTTAAAAGTGATACAGACAGAGCATGTTCTCATTTCACGTTGCTGCGACTTCTTGAGTGAGTaGATTCCGTGCTGGGCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: QFILKVIQTEHVLISRCCDFLSE*IPCWAS Trigger: ACTAGCCCAGCACGGAATTCACTCACTCAAGAAGTC...GCAGCAACGTGAAATGAGAACATGCTCTGTCTGTATCACTTTTAAAATAAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075451.12 ENSMUST00000194062.2 |
||
| CDS-3UTR TCA 90 bp | GTTTATTTTAAAAGTGATACAGACAGAGCATGTTCTCATTTCACGTTGCTGCTAAGGAGACTTCTTGAGTaGGTGAATTCCGTGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VYFKSDTDRACSHFTLLLRRLLE*VNSVLG Trigger: GCCCAGCACGGAATTCACTCACTCAAGAAGTCTCCT...TAGCAGCAACGTGAAATGAGAACATGCTCTGTCTGTATCACTTTTAAAATAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075451.12 ENSMUST00000194062.2 |
||
| CDS-3UTR GCA 90 bp | ACCATGACCAAGACAACTCTTATAAGAGAAGCATTTAATTGGGGTTGGCTTACAAATCTCCATTGGGAATaGCTGGGGGTATCTCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: TMTKTTLIREAFNWGWLTNLHWE*LGVSHK Trigger: CTTGTGAGATACCCCCAGGCATTCCCAATGGAGATT...TGTAAGCCAACCCCAATTAAATGCTTCTCTTATAAGAGTTGTCTTGGTCATGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000193094.6 ENSMUST00000194111.6 |
||
| CDS-3UTR GCA 90 bp | CTTATAAGAGAAGCATTTAATTGGGGTTGGCTTACAGGTTCAGAGGTTCAGTCCACTGGCTTTGAGAACTaGCTTCTAGAGTATACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LIREAFNWGWLTGSEVQSTGFEN*LLEYTH Trigger: ATGGGTATACTCTAGAAGGCAGTTCTCAAAGCCAGT...GGACTGAACCTCTGAACCTGTAAGCCAACCCCAATTAAATGCTTCTCTTATAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193094.6 ENSMUST00000194111.6 |
||
| CDS-3UTR CCA 90 bp | CATTGTTTTCGTATACACTTATCTTCAGCACTCGTCCAGGTTGAGTCTTGTTTGCTCACCCAAAGTAAATaGCAGCAAGAACAGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HCFRIHLSSALVQVESCLLTQSK*QQEQQQ Trigger: TTGCTGCTGTTCTTGCTGCCATTTACTTTGGGTGAG...CAAACAAGACTCAACCTGGACGAGTGCTGAAGATAAGTGTATACGAAAACAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193829.2 |
||
| CDS-3UTR TCA 90 bp | CAGTTTATTTTAAAAGTGATACAGACAGAGCATGTTCTCATTTCACGTTGCTGCCATTTGTTTAGGGACTaGCAATGCACACTGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QFILKVIQTEHVLISRCCHLFRD*QCTLLA Trigger: AGCCAGCAGTGTGCATTGTCAGTCCCTAAACAAATG...GCAGCAACGTGAAATGAGAACATGCTCTGTCTGTATCACTTTTAAAATAAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075451.12 ENSMUST00000194062.2 |
||
| CDS-3UTR TCA 90 bp | CAGTTTATTTTAAAAGTGATACAGACAGAGCATGTTCTCATTTCACGTTGCTGCGACATATCACTCCCTTaGAGCAGCTTGGTAACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QFILKVIQTEHVLISRCCDISLP*SSLVTL Trigger: CAGAGTTACCAAGCTGCTTCAAGGGAGTGATATGTC...GCAGCAACGTGAAATGAGAACATGCTCTGTCTGTATCACTTTTAAAATAAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075451.12 ENSMUST00000194062.2 |
||
| CDS-3UTR TCA 90 bp | GTTTATTTTAAAAGTGATACAGACAGAGCATGTTCTCATTTCACGTTGCTGCTAGACTTCTTGAGTGAGTaGATTCCGTGCTGGGCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VYFKSDTDRACSHFTLLLDFLSE*IPCWAS Trigger: ACTAGCCCAGCACGGAATTCACTCACTCAAGAAGTC...TAGCAGCAACGTGAAATGAGAACATGCTCTGTCTGTATCACTTTTAAAATAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075451.12 ENSMUST00000194062.2 |
||
| CDS-3UTR GCA 90 bp | AAGACAACTCTTATAAGAGAAGCATTTAATTGGGGTTGGCTTACAGGTTCAGAGGGGATCCAAACTGAATaGCTGTGTGTACATGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: KTTLIREAFNWGWLTGSEGIQTE*LCVHVP Trigger: TGGTACATGTACACACAGGCATTCAGTTTGGATCCC...CTCTGAACCTGTAAGCCAACCCCAATTAAATGCTTCTCTTATAAGAGTTGTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000193094.6 ENSMUST00000194111.6 |
||
| CDS-3UTR GCA 90 bp | CAGTTTATTTTAAAAGTGATACAGACAGAGCATGTTCTCATTTCACGTTGCTGCAATCTCCATTGGGAATaGCTGGGGGTATCTCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: QFILKVIQTEHVLISRCCNLHWE*LGVSHK Trigger: CTTGTGAGATACCCCCAGGCATTCCCAATGGAGATT...GCAGCAACGTGAAATGAGAACATGCTCTGTCTGTATCACTTTTAAAATAAACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075451.12 |
||
| CDS-3UTR GCA 90 bp | ACAGACACCATGACCAAGACAACTCTTATAAGAGAAGCATTTAATTGGGGTTGGACTGGCTTTGAGAACTaGCTTCTAGAGTATACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TDTMTKTTLIREAFNWGWTGFEN*LLEYTH Trigger: ATGGGTATACTCTAGAAGGCAGTTCTCAAAGCCAGT...CCAACCCCAATTAAATGCTTCTCTTATAAGAGTTGTCTTGGTCATGGTGTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193094.6 ENSMUST00000194111.6 |
||
| CDS-3UTR CCA 90 bp | TCCTTCTGTCTCTTTGGATTAAGATGTATTACCATCATGTTTGGACCTACCTTCGTGACCCAAAGTAAATaGCAGCAAGAACAGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SFCLFGLRCITIMFGPTFVTQSK*QQEQQQ Trigger: TTGCTGCTGTTCTTGCTGCCATTTACTTTGGGTCAC...GAAGGTAGGTCCAAACATGATGGTAATACATCTTAATCCAAAGAGACAGAAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
||
| CDS-3UTR TCA 90 bp | GTTTATTTTAAAAGTGATACAGACAGAGCATGTTCTCATTTCACGTTGCTGCTACATTTGTTTAGGGACTaGCAATGCACACTGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VYFKSDTDRACSHFTLLLHLFRD*QCTLLA Trigger: AGCCAGCAGTGTGCATTGTCAGTCCCTAAACAAATG...TAGCAGCAACGTGAAATGAGAACATGCTCTGTCTGTATCACTTTTAAAATAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075451.12 ENSMUST00000194062.2 |
||
| CDS-3UTR TCA 90 bp | GTTTATTTTAAAAGTGATACAGACAGAGCATGTTCTCATTTCACGTTGCTGCTAGACATATCACTCCCTTaGAGCAGCTTGGTAACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VYFKSDTDRACSHFTLLLDISLP*SSLVTL Trigger: CAGAGTTACCAAGCTGCTTCAAGGGAGTGATATGTC...TAGCAGCAACGTGAAATGAGAACATGCTCTGTCTGTATCACTTTTAAAATAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075451.12 ENSMUST00000194062.2 |
||
| CDS-3UTR GCA 90 bp | CAGTTTATTTTAAAAGTGATACAGACAGAGCATGTTCTCATTTCACGTTGCTGCCCACTCACAAATAGGTaGCTCAGTATCCCAATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QFILKVIQTEHVLISRCCPLTNR*LSIPIN Trigger: GTTGATTGGGATACTGAGGCACCTATTTGTGAGTGG...GCAGCAACGTGAAATGAGAACATGCTCTGTCTGTATCACTTTTAAAATAAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075451.12 |
||
| CDS-3UTR GCA 90 bp | CAAATCTACATTCTTCCAAAGAAAAGGATGGTCAAGCCTATCATGACAATACTCCCACTCACAAATAGGTaGCTCAGTATCCCAATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QIYILPKKRMVKPIMTILPLTNR*LSIPIN Trigger: GTTGATTGGGATACTGAGGCACCTATTTGTGAGTGG...GAGTATTGTCATGATAGGCTTGACCATCCTTTTCTTTGGAAGAATGTAGATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
||
| CDS-3UTR CCA 90 bp | CTTATAAGAGAAGCATTTAATTGGGGTTGGCTTACAGGTTCAGAGGTTCAGTCCCCTCTTGATATATCCTaGGAGACATTCATACAACAA | + |
|
Preference number: 4 (lower is better) Translates to: LIREAFNWGWLTGSEVQSPLDIS*ETFIQQ Trigger: TTGTTGTATGAATGTCTCCCAGGATATATCAAGAGG...GGACTGAACCTCTGAACCTGTAAGCCAACCCCAATTAAATGCTTCTCTTATAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000193094.6 ENSMUST00000194111.6 |
||
| CDS-3UTR TCA 90 bp | ACCATGACCAAGACAACTCTTATAAGAGAAGCATTTAATTGGGGTTGGCTTACATCCCAATCAACACTTTaGTCAGTGATGACACATACA | + |
|
Preference number: 4 (lower is better) Translates to: TMTKTTLIREAFNWGWLTSQSTL*SVMTHT Trigger: TGTATGTGTCATCACTGATCAAAGTGTTGATTGGGA...TGTAAGCCAACCCCAATTAAATGCTTCTCTTATAAGAGTTGTCTTGGTCATGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193094.6 ENSMUST00000194111.6 |
||
| CDS-3UTR GCA 90 bp | GTTTATTTTAAAAGTGATACAGACAGAGCATGTTCTCATTTCACGTTGCTGCTAGGGATCCAAACTGAATaGCTGTGTGTACATGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: VYFKSDTDRACSHFTLLLGIQTE*LCVHVP Trigger: TGGTACATGTACACACAGGCATTCAGTTTGGATCCC...TAGCAGCAACGTGAAATGAGAACATGCTCTGTCTGTATCACTTTTAAAATAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075451.12 |
||
| CDS-3UTR GCA 90 bp | CAGTTTATTTTAAAAGTGATACAGACAGAGCATGTTCTCATTTCACGTTGCTGCACTGGCTTTGAGAACTaGCTTCTAGAGTATACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QFILKVIQTEHVLISRCCTGFEN*LLEYTH Trigger: ATGGGTATACTCTAGAAGGCAGTTCTCAAAGCCAGT...GCAGCAACGTGAAATGAGAACATGCTCTGTCTGTATCACTTTTAAAATAAACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075451.12 ENSMUST00000194062.2 |
||
| CDS-3UTR CCA 90 bp | GTTTATTTTAAAAGTGATACAGACAGAGCATGTTCTCATTTCACGTTGCTGCTAGTGACCCAAAGTAAATaGCAGCAAGAACAGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VYFKSDTDRACSHFTLLLVTQSK*QQEQQQ Trigger: TTGCTGCTGTTCTTGCTGCCATTTACTTTGGGTCAC...TAGCAGCAACGTGAAATGAGAACATGCTCTGTCTGTATCACTTTTAAAATAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075451.12 |
||
| CDS-3UTR CCA 90 bp | CTTATAAGAGAAGCATTTAATTGGGGTTGGCTTACAGGTTCAGAGGTTCAGTCCACAAATATGTTCCAATaGGAAACATGGATTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LIREAFNWGWLTGSEVQSTNMFQ*ETWIHQ Trigger: CTGATGAATCCATGTTTCCCATTGGAACATATTTGT...GGACTGAACCTCTGAACCTGTAAGCCAACCCCAATTAAATGCTTCTCTTATAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193094.6 ENSMUST00000194111.6 |
||
| CDS-3UTR CCA 90 bp | ATTCAGCTCCATTTCACTTCCTGGTGCCCCTTTATTACTGTACACTTTGTACTTCCTCTTGATATATCCTaGGAGACATTCATACAACAA | + |
|
Preference number: 4 (lower is better) Translates to: IQLHFTSWCPFITVHFVLPLDIS*ETFIQQ Trigger: TTGTTGTATGAATGTCTCCCAGGATATATCAAGAGG...AAGTACAAAGTGTACAGTAATAAAGGGGCACCAGGAAGTGAAATGGAGCTGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
||
| CDS-3UTR TCA 90 bp | CAGTTTATTTTAAAAGTGATACAGACAGAGCATGTTCTCATTTCACGTTGCTGCTCCCAATCAACACTTTaGTCAGTGATGACACATACA | + |
|
Preference number: 4 (lower is better) Translates to: QFILKVIQTEHVLISRCCSQSTL*SVMTHT Trigger: TGTATGTGTCATCACTGATCAAAGTGTTGATTGGGA...GCAGCAACGTGAAATGAGAACATGCTCTGTCTGTATCACTTTTAAAATAAACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075451.12 |
||
| CDS-3UTR TCA 90 bp | CAAATCTACATTCTTCCAAAGAAAAGGATGGTCAAGCCTATCATGACAATACTCTCCCAATCAACACTTTaGTCAGTGATGACACATACA | + |
|
Preference number: 4 (lower is better) Translates to: QIYILPKKRMVKPIMTILSQSTL*SVMTHT Trigger: TGTATGTGTCATCACTGATCAAAGTGTTGATTGGGA...GAGTATTGTCATGATAGGCTTGACCATCCTTTTCTTTGGAAGAATGTAGATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
||
| CDS-3UTR GCA 90 bp | GTTTATTTTAAAAGTGATACAGACAGAGCATGTTCTCATTTCACGTTGCTGCTAACTGGCTTTGAGAACTaGCTTCTAGAGTATACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VYFKSDTDRACSHFTLLLTGFEN*LLEYTH Trigger: ATGGGTATACTCTAGAAGGCAGTTCTCAAAGCCAGT...TAGCAGCAACGTGAAATGAGAACATGCTCTGTCTGTATCACTTTTAAAATAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075451.12 ENSMUST00000194062.2 |
||
| CDS-3UTR TCA 90 bp | GTTTATTTTAAAAGTGATACAGACAGAGCATGTTCTCATTTCACGTTGCTGCTAAAAGTCTTCTCTGGTTaGACTGAAGAAATCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: VYFKSDTDRACSHFTLLLKVFSG*TEEISI Trigger: AATGGAGATTTCTTCAGTTCAACCAGAGAAGACTTT...TAGCAGCAACGTGAAATGAGAACATGCTCTGTCTGTATCACTTTTAAAATAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075451.12 |
||
| CDS-3UTR CCA 90 bp | GTTTATTTTAAAAGTGATACAGACAGAGCATGTTCTCATTTCACGTTGCTGCTACCTCTTGATATATCCTaGGAGACATTCATACAACAA | + |
|
Preference number: 4 (lower is better) Translates to: VYFKSDTDRACSHFTLLLPLDIS*ETFIQQ Trigger: TTGTTGTATGAATGTCTCCCAGGATATATCAAGAGG...TAGCAGCAACGTGAAATGAGAACATGCTCTGTCTGTATCACTTTTAAAATAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075451.12 |
||
| CDS-3UTR CCA 90 bp | GTTTATTTTAAAAGTGATACAGACAGAGCATGTTCTCATTTCACGTTGCTGCTAACAAATATGTTCCAATaGGAAACATGGATTCATCAG | + |
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Preference number: 4 (lower is better) Translates to: VYFKSDTDRACSHFTLLLTNMFQ*ETWIHQ Trigger: CTGATGAATCCATGTTTCCCATTGGAACATATTTGT...TAGCAGCAACGTGAAATGAGAACATGCTCTGTCTGTATCACTTTTAAAATAAAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075451.12 |
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| CDS-3UTR CAA 90 bp | GTCCATTATGATCAAGGCAGAAGCATGGCAGTGTCCAGGCAGACATGGCGGAGGCGACATATCACTCCCTaGAAGCAGCTTGGTAACTCT | + |
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Preference number: 5 (lower is better) Translates to: VHYDQGRSMAVSRQTWRRRHITP*KQLGNS Trigger: AGAGTTACCAAGCTGCTTCAAGGGAGTGATATGTCG...CCTCCGCCATGTCTGCCTGGACACTGCCATGCTTCTGCCTTGATCATAATGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193094.6 ENSMUST00000194111.6 |
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| CDS GCA 90 bp | GGGAATGCCTGGGGGTATCTCACAAGGAATCCACTCACAAATAGGTaGCTCAGTATCCCAATCAACACTTTGATCAGTGATGACACATAC | + |
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Preference number: 5 (lower is better) Translates to: GNAWGYLTRNPLTNR*LSIPINTLISDDTY Trigger: GTATGTGTCATCACTGATCAAAGTGTTGATTGGGATACTGAGGCACCTATTTGTGAGTGGATTCCTTGTGAGATACCCCCAGGCATTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000075451.12 ENSMUST00000191775.2 ENSMUST00000193094.6 ENSMUST00000194111.6 |
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| CDS-3UTR CAA 90 bp | ACAGACACCATGACCAAGACAACTCTTATAAGAGAAGCATTTAATTGGGGTTGGCTGAAGAAATCTCCATaGGGAATGCCTGGGGGTATC | + |
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Preference number: 5 (lower is better) Translates to: TDTMTKTTLIREAFNWGWLKKSP*GMPGGI Trigger: GATACCCCCAGGCATTCCCAATGGAGATTTCTTCAG...CCAACCCCAATTAAATGCTTCTCTTATAAGAGTTGTCTTGGTCATGGTGTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000193094.6 ENSMUST00000194111.6 |
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| CDS-3UTR CAA 90 bp | ACAGACACCATGACCAAGACAACTCTTATAAGAGAAGCATTTAATTGGGGTTGGCAGGTTGAGTCTTGTTaGCAGGTGATAGAGAACTGC | + |
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Preference number: 5 (lower is better) Translates to: TDTMTKTTLIREAFNWGWQVESC*QVIENC Trigger: GCAGTTCTCTATCACCTGCAAACAAGACTCAACCTG...CCAACCCCAATTAAATGCTTCTCTTATAAGAGTTGTCTTGGTCATGGTGTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193094.6 ENSMUST00000194111.6 |
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| CDS-3UTR CAA 90 bp | AAGACAACTCTTATAAGAGAAGCATTTAATTGGGGTTGGCTTACAGGTTCAGAGCAGGTTGAGTCTTGTTaGCAGGTGATAGAGAACTGC | + |
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Preference number: 5 (lower is better) Translates to: KTTLIREAFNWGWLTGSEQVESC*QVIENC Trigger: GCAGTTCTCTATCACCTGCAAACAAGACTCAACCTG...CTCTGAACCTGTAAGCCAACCCCAATTAAATGCTTCTCTTATAAGAGTTGTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193094.6 ENSMUST00000194111.6 |
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| CDS-3UTR CAA 90 bp | TCCTTCTGTCTCTTTGGATTAAGATGTATTACCATCATGTTTGGACCTACCTTCCGACATATCACTCCCTaGAAGCAGCTTGGTAACTCT | + |
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Preference number: 5 (lower is better) Translates to: SFCLFGLRCITIMFGPTFRHITP*KQLGNS Trigger: AGAGTTACCAAGCTGCTTCAAGGGAGTGATATGTCG...GAAGGTAGGTCCAAACATGATGGTAATACATCTTAATCCAAAGAGACAGAAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193094.6 |
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| CDS-3UTR CAA 90 bp | CAGTTTATTTTAAAAGTGATACAGACAGAGCATGTTCTCATTTCACGTTGCTGCCAGGTTGAGTCTTGTTaGCAGGTGATAGAGAACTGC | + |
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Preference number: 5 (lower is better) Translates to: QFILKVIQTEHVLISRCCQVESC*QVIENC Trigger: GCAGTTCTCTATCACCTGCAAACAAGACTCAACCTG...GCAGCAACGTGAAATGAGAACATGCTCTGTCTGTATCACTTTTAAAATAAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075451.12 |
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| CDS-3UTR CAA 90 bp | GTTTATTTTAAAAGTGATACAGACAGAGCATGTTCTCATTTCACGTTGCTGCTACTGAAGAAATCTCCATaGGGAATGCCTGGGGGTATC | + |
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Preference number: 5 (lower is better) Translates to: VYFKSDTDRACSHFTLLLLKKSP*GMPGGI Trigger: GATACCCCCAGGCATTCCCAATGGAGATTTCTTCAG...TAGCAGCAACGTGAAATGAGAACATGCTCTGTCTGTATCACTTTTAAAATAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075451.12 |
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| CDS-3UTR CAA 90 bp | GTTTATTTTAAAAGTGATACAGACAGAGCATGTTCTCATTTCACGTTGCTGCTACGACATATCACTCCCTaGAAGCAGCTTGGTAACTCT | + |
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Preference number: 5 (lower is better) Translates to: VYFKSDTDRACSHFTLLLRHITP*KQLGNS Trigger: AGAGTTACCAAGCTGCTTCAAGGGAGTGATATGTCG...TAGCAGCAACGTGAAATGAGAACATGCTCTGTCTGTATCACTTTTAAAATAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075451.12 ENSMUST00000194062.2 |
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| CDS CCA 72 bp | TGGGGCTGGGCAGTGACAGGCAGCCCAGACCAGCGTTaGAGTCTGCGCAGAGCCTATTTACCGCGGGTTCCC | + |
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Preference number: 6 (lower is better) Translates to: WGWAVTGSPDQR*SLRRAYLPRVP Trigger: GGGAACCCGCGGTAAATAGGCTCTGCGCAGACTCCAACGCTGGTCTGGGCTGCCTGTCACTGCCCAGCCCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193829.2 |
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| CDS CAA 72 bp | ATGGGGCTGGGCAGTGACAGGCAGCCCAGACCAGCGTaGGAGTCTGCGCAGAGCCTATTTACCGCGGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: MGLGSDRQPRPA*ESAQSLFTAGS Trigger: GGAACCCGCGGTAAATAGGCTCTGCGCAGACTCCAACGCTGGTCTGGGCTGCCTGTCACTGCCCAGCCCCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193829.2 |
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| CDS CAA 90 bp | TCACCCAAAGTAAATGGCAGCAAGAACAGCAGCAAAACTTCTAGCTaGACTCCTCCCCGGCCGAAGGCTACAAGGAGCCACACCGGATCC | + |
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Preference number: 6 (lower is better) Translates to: SPKVNGSKNSSKTSS*TPPRPKATRSHTGS Trigger: GGATCCGGTGTGGCTCCTTGTAGCCTTCGGCCGGGGAGGAGTCAAGCTAGAAGTTTTGCTGCTGTTCTTGCTGCCATTTACTTTGGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193829.2 |
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| CDS TCA 72 bp | GGTTTGGCAGAAGGAAGCTGTGATGGGGCTGGGCAGTaGCCCAAAGTAAATGGCAGCAAGAACAGCAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: GLAEGSCDGAGQ*PKVNGSKNSSK Trigger: TTTGCTGCTGTTCTTGCTGCCATTTACTTTGGGTCACTGCCCAGCCCCATCACAGCTTCCTTCTGCCAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075451.12 ENSMUST00000193094.6 |
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| CDS TCA 72 bp | TTCATTCCCAACCCCTTCTGGAATCCACTCATCTCCTaGGGGAGACGACATATCACTCCCTTGAAGCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: FIPNPFWNPLIS*GRRHITPLKQL Trigger: AAGCTGCTTCAAGGGAGTGATATGTCGTCTCCCTCAGGAGATGAGTGGATTCCAGAAGGGGTTGGGAATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000075451.12 ENSMUST00000191775.2 ENSMUST00000193094.6 ENSMUST00000194062.2 ENSMUST00000194111.6 |
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| CDS CAA 72 bp | CTCACAAATAGGTGCCTCAGTATCCCAATCAACACTTaGATCAGTGATGACACATACAGCAGAGGAGGAACC | + |
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Preference number: 6 (lower is better) Translates to: LTNRCLSIPINT*ISDDTYSRGGT Trigger: GGTTCCTCCTCTGCTGTATGTGTCATCACTGATCAAAGTGTTGATTGGGATACTGAGGCACCTATTTGTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075451.12 ENSMUST00000191775.2 ENSMUST00000193094.6 ENSMUST00000194111.6 |
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| CDS GCA 72 bp | TGGGGGTATCTCACAAGGAATCCACTCACAAATAGGTaGCTCAGTATCCCAATCAACACTTTGATCAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: WGYLTRNPLTNR*LSIPINTLISD Trigger: ATCACTGATCAAAGTGTTGATTGGGATACTGAGGCACCTATTTGTGAGTGGATTCCTTGTGAGATACCCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000075451.12 ENSMUST00000191775.2 ENSMUST00000193094.6 ENSMUST00000194111.6 |
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