Pregenerated sensors for CPZ (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036596Ensembl transcript IDs: ENSMUST00000038676.7, ENSMUST00000132959.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | GGTGAACATACTTTAATAAGCTTCAGAGGCTGTGTATaGTGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: GEHTLISFRGCV*CLWLPGSRQKP Trigger: GGGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGAAGCTTATTAAAGTATGTTCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR CCA 90 bp | TCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCCAGGCGTCCAGGCGAGCAGCTaGGGCTGGGGCGCGCGGCAA | + |
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Preference number: 4 (lower is better) Translates to: SEAVYDVCGCQAPGRSPGVQASS*GWGARQ Trigger: TTGCCGCGCGCCCCAGCCCCAGCTGCTCGCCTGGAC...GCCTGGGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR TCA 90 bp | CAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCCAGGCTCCAGAGGATGGAGGATaGAGTCCACACGGCCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: QRLCMMSVAARLQAEAQAPEDGG*SPHGRP Trigger: AGGCCGGCCGTGTGGACTTCATCCTCCATCCTCTGG...AGCCTGGGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR GCA 90 bp | GAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCCAGGCTGTGGCTCCATCAGTTCATaGTGGCCTGGGCGGCTCGAG | + |
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Preference number: 4 (lower is better) Translates to: EAVYDVCGCQAPGRSPGCGSISS*WPGRLE Trigger: CTCGAGCCGCCCAGGCCAGCATGAACTGATGGAGCC...ACAGCCTGGGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR GCA 90 bp | AGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCCAGGCTGTGGCTGGATGCGAGGGTTaGCCAGCAGGTACTCCGAGC | + |
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Preference number: 4 (lower is better) Translates to: RLCMMSVAARLQAEAQAVAGCEG*PAGTPS Trigger: GCTCGGAGTACCTGCTGGGCAACCCTCGCATCCAGC...CACAGCCTGGGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR CCA 90 bp | CAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCCAGGCTGCAGGTGGATGCGGGTaGTGTTCAGCAGGCGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: QRLCMMSVAARLQAEAQAAGGCG*CSAGAG Trigger: TCCAGCGCCTGCTGAACACCACCCGCATCCACCTGC...AGCCTGGGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR CCA 90 bp | GAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCCAGGCTGTCGCCGCCATGCAGGCTaGCTGAGAGGACGAAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: EAVYDVCGCQAPGRSPGCRRHAG*LRGRRE Trigger: TTCCCTTCGTCCTCTCAGCCAGCCTGCATGGCGGCG...ACAGCCTGGGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR GCA 90 bp | TCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCCAGGCATGGCAGCAGGTGGATaGGGGTGGTGTTCAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SEAVYDVCGCQAPGRSPGMAAGG*GWCSAG Trigger: GCCTGCTGAACACCACCCGCATCCACCTGCTGCCAT...GCCTGGGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR TCA 90 bp | CAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCCAGGCTCAGACATACCTCCAGTaGAGCTGTACCAGTCCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QRLCMMSVAARLQAEAQAQTYLQ*SCTSPP Trigger: GGGCGGACTGGTACAGCTTCACTGGAGGTATGTCTG...AGCCTGGGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR GCA 90 bp | AAGCTTCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCTCAGCAGGCGCTGGATaGGAGGGTTGCCCAGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: KLQRLCMMSVAARLQAEASAGAG*EGCPAG Trigger: ACCTGCTGGGCAACCCTCGCATCCAGCGCCTGCTGA...GGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGAAGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR CCA 90 bp | AAGCTTCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCGCGAATGAAGGTAGGTaGCAGGCCAGAGGGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLQRLCMMSVAARLQAEAANEGR*QARGQG Trigger: GCCCTGCCCTCTGGCCTGCCACCTACCTTCATTCGC...GGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGAAGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR CCA 90 bp | TCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCCAGGCCAATGCTGTAGGTCTTaGCCACCTGGGAACAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SEAVYDVCGCQAPGRSPGQCCRS*PPGNSG Trigger: CCCGCTGTTCCCAGGTGGCCAAGACCTACAGCATTG...GCCTGGGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR CCA 90 bp | GAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCCAGGCTGTCAGTTCATGCTGGCCTaGGCGGCTCGAGAACTCGAT | + |
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Preference number: 4 (lower is better) Translates to: EAVYDVCGCQAPGRSPGCQFMLA*AARELD Trigger: ATCGAGTTCTCGAGCCGCCCAGGCCAGCATGAACTG...ACAGCCTGGGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR CCA 90 bp | TCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCCAGGCGTAAGCCCACCACCATaGCTTGCTCCCACTAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SEAVYDVCGCQAPGRSPGVSPPP*LAPTSW Trigger: CCAGCTAGTGGGAGCAAGCCATGGTGGTGGGCTTAC...GCCTGGGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR TCA 90 bp | GCTTCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCCAGGCTCGAGAACTCGATaGCCACCAGGTCCTTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: ASEAVYDVCGCQAPGRSPGSRTR*PPGPCL Trigger: AAGGCAAGGACCTGGTGGTCATCGAGTTCTCGAGCC...TGGGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR CCA 90 bp | CAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCCAGGCTGCAGGTCCACACAGGTaGCACTGTGTGTGTAGACCA | + |
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Preference number: 4 (lower is better) Translates to: QRLCMMSVAARLQAEAQAAGPHR*HCVCRP Trigger: TGGTCTACACACACAGTGCCACCTGTGTGGACCTGC...AGCCTGGGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR CCA 90 bp | GCTTCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCCATCCATCAGTTCATGCTaGCCTGGGCGGCTCGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ASEAVYDVCGCQAPGRSPSISSC*PGRLEN Trigger: GTTCTCGAGCCGCCCAGGCCAGCATGAACTGATGGA...TGGGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR TCA 90 bp | GCTTCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCCACAGCCGGTAGTACTCTaGCGTGAGGTCAGGGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ASEAVYDVCGCQAPGRSPQPVVL*REVREV Trigger: AACTTCCCTGACCTCACGTCAGAGTACTACCGGCTG...TGGGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR TCA 90 bp | TCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCCAGGCTCTGTATCCACTTCATaGTGGCTTTGGTCTCGGGGG | + |
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Preference number: 4 (lower is better) Translates to: SEAVYDVCGCQAPGRSPGSVSTS*WLWSRG Trigger: CCCCCGAGACCAAAGCCATCATGAAGTGGATACAGA...GCCTGGGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR GCA 90 bp | AAGCTTCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCAGCACCCTCTGCAGCTaGCACTTCGTAGCCATCAGG | + |
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Preference number: 4 (lower is better) Translates to: KLQRLCMMSVAARLQAEASTLCS*HFVAIR Trigger: CCTGATGGCTACGAAGTGGCAGCTGCAGAGGGTGCT...GGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGAAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR CCA 90 bp | AATAAGCTTCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCAGGCCATGTCGATaGCGTCAAAGGCCGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NKLQRLCMMSVAARLQAEARPCR*RQRPAG Trigger: GCCAGCCGGCCTTTGACGCCATCGACATGGCCTGGC...TTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGAAGCTTATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR TCA 90 bp | TCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCCAGGCCCACCAGTAGTACTGTaGGATGGGGATATGGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: SEAVYDVCGCQAPGRSPGPPVVL*DGDMVC Trigger: ACAGACCATATCCCCATCTCACAGTACTACTGGTGG...GCCTGGGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR GCA 90 bp | AAGCTTCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCCAAAGCTGCGCCCAATaGTGTAGGTCTTGGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: KLQRLCMMSVAARLQAEAQSCAQ*CRSWPP Trigger: AGGTGGCCAAGACCTACAGCATTGGGCGCAGCTTTG...GGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGAAGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR GCA 90 bp | CAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCCAGGCTCAGATCCAGGTTCTGTaGATTCTGCCTTCCACTGGT | + |
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Preference number: 4 (lower is better) Translates to: QRLCMMSVAARLQAEAQAQIQVL*ILPSTG Trigger: ACCAGTGGAAGGCAGAATGCACAGAACCTGGATCTG...AGCCTGGGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR GCA 90 bp | TTTAATAAGCTTCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAACCAGGTCGCCGCCATaGAGGCTGGCTGAGAGGACG | + |
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Preference number: 4 (lower is better) Translates to: FNKLQRLCMMSVAARLQATRSPP*RLAERT Trigger: CGTCCTCTCAGCCAGCCTGCATGGCGGCGACCTGGT...TGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGAAGCTTATTAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR CCA 90 bp | GCTTCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCCACAGGAAGGAAGTTCTTaGGTCCTGTCGCCAGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: ASEAVYDVCGCQAPGRSPQEGSS*VLSPED Trigger: ATCCTCTGGCGACAGGACCCAAGAACTTCCTTCCTG...TGGGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR TCA 90 bp | GAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCCAGGCTGTGCCACCTCATTGCCATaGATGTTTCCAATGAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: EAVYDVCGCQAPGRSPGCATSLP*MFPMSF Trigger: GAAGCTCATTGGAAACATTCATGGCAATGAGGTGGC...ACAGCCTGGGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR GCA 90 bp | AAGCTTCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCAGGTTCTGTGCATTCTaGCTTCCACTGGTCCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: KLQRLCMMSVAARLQAEARFCAF*LPLVQP Trigger: TGGCTGGACCAGTGGAAGGCAGAATGCACAGAACCT...GGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGAAGCTT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR GCA 90 bp | AATAAGCTTCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCACAGGTCCTGAGATaGAGGTCCACACAGGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: NKLQRLCMMSVAARLQAEAQVLR*RSTQVA Trigger: TGCCACCTGTGTGGACCTGCATCTCAGGACCTGTGC...TTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGAAGCTTATT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR GCA 90 bp | TACTTTAATAAGCTTCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGAGGGCTAGACTCCACTaGCTCCCACGACCGGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: YFNKLQRLCMMSVAARLQRARLH*LPRPVL Trigger: GAGCACCGGTCGTGGGAGGCAGTGGAGTCTAGCCCT...CTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGAAGCTTATTAAAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR CCA 90 bp | TTTAATAAGCTTCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAATGGATGGCAGCAGGTaGATGCGGGTGGTGTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: FNKLQRLCMMSVAARLQAMDGSR*MRVVFS Trigger: GCTGAACACCACCCGCATCCACCTGCTGCCATCCAT...TGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGAAGCTTATTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR CCA 90 bp | TTTAATAAGCTTCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCACCTGTCGCCAGAGGATaGAGGATGAAGTCCACACGG | + |
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Preference number: 4 (lower is better) Translates to: FNKLQRLCMMSVAARLQAPVARG*RMKSTR Trigger: CCGTGTGGACTTCATCCTCCATCCTCTGGCGACAGG...TGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGAAGCTTATTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR CCA 90 bp | AATAAGCTTCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAATCTCATGGGGGTTCTTaGAGAAGTCGAAGGGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: NKLQRLCMMSVAARLQAESHGGS*RSRRGR Trigger: CCTACCCCTTCGACTTCTCCAAGAACCCCCATGAGA...TTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGAAGCTTATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR GCA 90 bp | TTTAATAAGCTTCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGCCTTCCTCCTCTGGTaGGAAGTATTGGGCACAATC | + |
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Preference number: 4 (lower is better) Translates to: FNKLQRLCMMSVAARLQAAFLLW*EVLGTI Trigger: GATTGTGCCCAATACTTCGCACCAGAGGAGGAAGGC...TGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGAAGCTTATTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR CCA 90 bp | AATAAGCTTCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAACATTCTGCCTTCCACTaGTCCAGCCATTGTATCCAG | + |
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Preference number: 4 (lower is better) Translates to: NKLQRLCMMSVAARLQAEHSAFH*SSHCIQ Trigger: CTGGATACAATGGCTGGACCAGTGGAAGGCAGAATG...TTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGAAGCTTATT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR CCA 90 bp | AAGCTTCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCAACATCTTTTTCTCATaGGGGTTCTTGGAGAAGTCG | + |
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Preference number: 4 (lower is better) Translates to: KLQRLCMMSVAARLQAEANIFFS*GFLEKS Trigger: CGACTTCTCCAAGAACCCCCATGAGAAAAAGATGTT...GGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGAAGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR CCA 90 bp | AATAAGCTTCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAACAAAATCCATCTGTGTaGGCTCTCTCTGAGGATCCT | + |
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Preference number: 4 (lower is better) Translates to: NKLQRLCMMSVAARLQAEQNPSV*ALSEDP Trigger: AGGATCCTCAGAGAGAGCCCACACAGATGGATTTTG...TTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGAAGCTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR CCA 90 bp | TTTAATAAGCTTCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAAGTAGTACTGTGAGATaGGGATATGGTCTGTGCGCA | + |
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Preference number: 4 (lower is better) Translates to: FNKLQRLCMMSVAARLQASSTVR*GYGLCA Trigger: TGCGCACAGACCATATCCCCATCTCACAGTACTACT...TGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGAAGCTTATTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS CCA 90 bp | GCAGGTCCACACAGGTGGCGGAGGGGTCGGGTCCAGGCGAGCAGCTaGGGCTGGGGCGCGCGGCAAGGGCCAGCACGGCCAGCGCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: AGPHRWRRGRVQASS*GWGARQGPARPAQP Trigger: TGGCTGCGCTGGCCGTGCTGGCCCTTGCCGCGCGCCCCAGCCCCAGCTGCTCGCCTGGACCCGACCCCTCCGCCACCTGTGTGGACCTGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132959.2 |
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| CDS CCA 90 bp | CCAGCCTCTGACATTTACCGGAGGGGTCGGGTCCAGGCGAGCAGCTaGGGCTGGGGCGCGCGGCAAGGGCCAGCACGGCCAGCGCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: PASDIYRRGRVQASS*GWGARQGPARPAQP Trigger: TGGCTGCGCTGGCCGTGCTGGCCCTTGCCGCGCGCCCCAGCCCCAGCTGCTCGCCTGGACCCGACCCCTCCGGTAAATGTCAGAGGCTGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS TCA 90 bp | GTGTGGGGAACGATGTATGGTTATAGGCGGCATCCGCACAGGTCCTaGGATGCAGGTCCACACAGGTGGCGGAGGGGTCGGGTCCAGGCG | + |
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Preference number: 5 (lower is better) Translates to: VWGTMYGYRRHPHRS*DAGPHRWRRGRVQA Trigger: CGCCTGGACCCGACCCCTCCGCCACCTGTGTGGACCTGCATCTCAGGACCTGTGCGGATGCCGCCTATAACCATACATCGTTCCCCACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132959.2 |
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| CDS-3UTR CAA 90 bp | TCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCCAGGCCGCTGGATGCGAGGGTaGCCCAGCAGGTACTCCGAG | + |
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Preference number: 5 (lower is better) Translates to: SEAVYDVCGCQAPGRSPGRWMRG*PSRYSE Trigger: CTCGGAGTACCTGCTGGGCAACCCTCGCATCCAGCG...GCCTGGGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS CCA 90 bp | CCACCAGGTCCTTGCCTTCAAAGCTGCGCCCAATGCTGTAGGTCTTaGCCACCTGGGAACAGCGGGCCGCTGTCCTCTTCAGCACTCGGA | + |
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Preference number: 5 (lower is better) Translates to: PPGPCLQSCAQCCRS*PPGNSGPLSSSALG Trigger: TCCGAGTGCTGAAGAGGACAGCGGCCCGCTGTTCCCAGGTGGCCAAGACCTACAGCATTGGGCGCAGCTTTGAAGGCAAGGACCTGGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR CAA 90 bp | CAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCCAGGCTCCCCGCTTCAGGAAGTaGCCCCCACACCTGTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: QRLCMMSVAARLQAEAQAPRFRK*PPHLFS Trigger: GGAGAACAGGTGTGGGGGCAACTTCCTGAAGCGGGG...AGCCTGGGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR CAA 90 bp | CAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCCAGGCTTACCAGTCCGCCCCGTaGATGATGCTCCCCCGCTTC | + |
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Preference number: 5 (lower is better) Translates to: QRLCMMSVAARLQAEAQAYQSAP*MMLPRF Trigger: GAAGCGGGGGAGCATCATCAACGGGGCGGACTGGTA...AGCCTGGGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS CCA 90 bp | CGAAGTATTGGGCACAATCAAGGAAGTAGGGCCAGGCCATGTCGATaGCGTCAAAGGCCGGCTGGCAGGCCTCCCGAAGGCCCTCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: RSIGHNQGSRARPCR*RQRPAGRPPEGPHR Trigger: TCTGTGAGGGCCTTCGGGAGGCCTGCCAGCCGGCCTTTGACGCCATCGACATGGCCTGGCCCTACTTCCTTGATTGTGCCCAATACTTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS CCA 90 bp | GACCATCTGAGCATAGGAGTGGTGGGCGAAGCGAATGAAGGTAGGTaGCAGGCCAGAGGGCAGGGCCTCCTCAACATCCAGCTCTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: DHLSIGVVGEANEGR*QARGQGLLNIQLST Trigger: CGTGGAGAGCTGGATGTTGAGGAGGCCCTGCCCTCTGGCCTGCCACCTACCTTCATTCGCTTCGCCCACCACTCCTATGCTCAGATGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS CCA 90 bp | CTTTGGTCTCGGGGGCCACCTTACCCCACCAGTAGTACTGTGAGATaGGGATATGGTCTGTGCGCACACCACGAGTCGAGGCCAGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: LWSRGPPYPTSSTVR*GYGLCAHHESRPAG Trigger: ACCGGCTGGCCTCGACTCGTGGTGTGCGCACAGACCATATCCCCATCTCACAGTACTACTGGTGGGGTAAGGTGGCCCCCGAGACCAAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS TCA 90 bp | CAGGCTCCATCAGTTCATGCTGGCCTGGGCGGCTCGAGAACTCGATaGCCACCAGGTCCTTGCCTTCAAAGCTGCGCCCAATGCTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: QAPSVHAGLGGSRTR*PPGPCLQSCAQCCR Trigger: CCTACAGCATTGGGCGCAGCTTTGAAGGCAAGGACCTGGTGGTCATCGAGTTCTCGAGCCGCCCAGGCCAGCATGAACTGATGGAGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR CAA 90 bp | TCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCCAGGCATGACCACCAGGTCCTaGCCTTCAAAGCTGCGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SEAVYDVCGCQAPGRSPGMTTRS*PSKLRP Trigger: TGGGCGCAGCTTTGAAGGCAAGGACCTGGTGGTCAT...GCCTGGGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR CAA 90 bp | CAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCCAGGCTCCAGGAAGGAAGTTCTaGGGTCCTGTCGCCAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QRLCMMSVAARLQAEAQAPGRKF*GPVARG Trigger: TCCTCTGGCGACAGGACCCAAGAACTTCCTTCCTGG...AGCCTGGGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR CAA 90 bp | GCTTCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCCAAGCAGCCAGCGTGGCTaGTACGGGCTCAGTGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: ASEAVYDVCGCQAPGRSPSSQRG*YGLSDV Trigger: CACATCACTGAGCCCGTACAAGCCACGCTGGCTGCT...TGGGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS CCA 90 bp | CTCGAAGGTCCAGGAAGGAAGTTCTTGGGTCCTGTCGCCAGAGGATaGAGGATGAAGTCCACACGGCCGGCCTTCTTCATGCGCAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LEGPGRKFLGPVARG*RMKSTRPAFFMRKG Trigger: TCCCTTGCGCATGAAGAAGGCCGGCCGTGTGGACTTCATCCTCCATCCTCTGGCGACAGGACCCAAGAACTTCCTTCCTGGACCTTCGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR CAA 90 bp | AGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCCAGGCTGTGGTGAGGTCAGGGAAGTaGCGGTTCAGATCCAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLCMMSVAARLQAEAQAVVRSGK*RFRSRF Trigger: GAACCTGGATCTGAACCGCAACTTCCCTGACCTCAC...CACAGCCTGGGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR CAA 90 bp | AGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCCAGGCTGTGTTGAGTAGGGGCTCCTaGTTCTGTTGCCACAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RLCMMSVAARLQAEAQAVLSRGS*FCCHRP Trigger: TGGCCTGTGGCAACAGAACAAGGAGCCCCTACTCAA...CACAGCCTGGGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS TCA 90 bp | GTGTGGGGAACGATGTATGGTTATAGGCGGCATCCGCACAGGTCCTaGGATGCAGGTCCACACAGGTGGCACTGTGTGTGTAGACCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VWGTMYGYRRHPHRS*DAGPHRWHCVCRPA Trigger: GGCTGGTCTACACACACAGTGCCACCTGTGTGGACCTGCATCTCAGGACCTGTGCGGATGCCGCCTATAACCATACATCGTTCCCCACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS TCA 90 bp | GGGGCCAACACAGAGCACCCTAGCAGCCGCAGGTCAGGGTTGCACTaGCCCTCCAGGAGAAAGTGTATCACACCCAACAGCATGTACTCA | + |
|
Preference number: 5 (lower is better) Translates to: GANTEHPSSRRSGLH*PSRRKCITPNSMYS Trigger: TGAGTACATGCTGTTGGGTGTGATACACTTTCTCCTGGAGGGTCAGTGCAACCCTGACCTGCGGCTGCTAGGGTGCTCTGTGTTGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038676.7 ENSMUST00000132959.2 |
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| CDS TCA 90 bp | CTGTGCGCACACCACGAGTCGAGGCCAGCCGGTAGTACTCTGACGTaGGGTCAGGGAAGTTGCGGTTCAGATCCAGGTTCTGTGCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: LCAHHESRPAGSTLT*GQGSCGSDPGSVHS Trigger: AGAATGCACAGAACCTGGATCTGAACCGCAACTTCCCTGACCTCACGTCAGAGTACTACCGGCTGGCCTCGACTCGTGGTGTGCGCACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS TCA 90 bp | GCAGGCTGGCTGAGAGGACGAAGGGAATGGTCTGTATCCACTTCATaGTGGCTTTGGTCTCGGGGGCCACCTTACCCCACCAGTAGTACT | + |
|
Preference number: 5 (lower is better) Translates to: AGWLRGRREWSVSTS*WLWSRGPPYPTSST Trigger: AGTACTACTGGTGGGGTAAGGTGGCCCCCGAGACCAAAGCCATCATGAAGTGGATACAGACCATTCCCTTCGTCCTCTCAGCCAGCCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS GCA 90 bp | AAAGTGTATCACACCCAACAGCATGTACTCAGGGCTAGACTCCACTaGCTCCCACGACCGGTGCTCCAGCGGTGTGGGGAACGATGTATG | + |
|
Preference number: 5 (lower is better) Translates to: KVYHTQQHVLRARLH*LPRPVLQRCGERCM Trigger: CATACATCGTTCCCCACACCGCTGGAGCACCGGTCGTGGGAGGCAGTGGAGTCTAGCCCTGAGTACATGCTGTTGGGTGTGATACACTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038676.7 ENSMUST00000132959.2 |
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| CDS GCA 90 bp | TCCACGGAGCTCTTCCAGAGGGTCATAGCAGCCTTCCTCCTCTGGTaGGAAGTATTGGGCACAATCAAGGAAGTAGGGCCAGGCCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: STELFQRVIAAFLLW*EVLGTIKEVGPGHV Trigger: GACATGGCCTGGCCCTACTTCCTTGATTGTGCCCAATACTTCGCACCAGAGGAGGAAGGCTGCTATGACCCTCTGGAAGAGCTCCGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS CCA 90 bp | CTCTCCACGGAGCTCTTCCAGAGGGTCATAGCAGCCTTCCTCCTCTaGTGCGAAGTATTGGGCACAATCAAGGAAGTAGGGCCAGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LSTELFQRVIAAFLL*CEVLGTIKEVGPGH Trigger: ATGGCCTGGCCCTACTTCCTTGATTGTGCCCAATACTTCGCACCAGAGGAGGAAGGCTGCTATGACCCTCTGGAAGAGCTCCGTGGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS CCA 90 bp | GGAAGTTGCGGTTCAGATCCAGGTTCTGTGCATTCTGCCTTCCACTaGTCCAGCCATTGTATCCAGCACCCTCTGCAGCTGCCACTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: GSCGSDPGSVHSAFH*SSHCIQHPLQLPLR Trigger: ACGAAGTGGCAGCTGCAGAGGGTGCTGGATACAATGGCTGGACCAGTGGAAGGCAGAATGCACAGAACCTGGATCTGAACCGCAACTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR CAA 90 bp | TTTAATAAGCTTCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAATGCCGGCAGGGCCTTaGTGTGTGGCCTCCCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: FNKLQRLCMMSVAARLQAMPAGP*CVASLT Trigger: TGTGAGGGAGGCCACACACAAAGGCCCTGCCGGCAT...TGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGAAGCTTATTAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
||
| CDS-3UTR CAA 90 bp | CAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCCAGGCTCTCTGGTGCGAAGTATaGGGCACAATCAAGGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: QRLCMMSVAARLQAEAQALWCEV*GTIKEV Trigger: TACTTCCTTGATTGTGCCCAATACTTCGCACCAGAG...AGCCTGGGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS-3UTR CAA 90 bp | AAGCTTCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCAGAAGCCACCATCTCCAGGAAGTaGAGTAGGGGCTCCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KLQRLCMMSVAARLQAEATISRK*SRGSLF Trigger: GAACAAGGAGCCCCTACTCAACTTCCTGGAGATGGT...GGCTTCTGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGAAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
||
| CDS-3UTR CAA 90 bp | TTTAATAAGCTTCAGAGGCTGTGTATGATGTCTGTGGCTGCCAGGCTCCAGGCACACTTCATGATGGCTTaGGTCTCGGGGGCCACCTTA | + |
|
Preference number: 5 (lower is better) Translates to: FNKLQRLCMMSVAARLQAHFMMA*VSGATL Trigger: TAAGGTGGCCCCCGAGACCAAAGCCATCATGAAGTG...TGCCTGGAGCCTGGCAGCCACAGACATCATACACAGCCTCTGAAGCTTATTAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS CCA 72 bp | TACCGGAGGGGTCGGGTCCAGGCGAGCAGCTGGGGCTaGGGCGCGCGGCAAGGGCCAGCACGGCCAGCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: YRRGRVQASSWG*GARQGPARPAQ Trigger: CTGCGCTGGCCGTGCTGGCCCTTGCCGCGCGCCCCAGCCCCAGCTGCTCGCCTGGACCCGACCCCTCCGGTA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS CCA 72 bp | GACATTTACCGGAGGGGTCGGGTCCAGGCGAGCAGCTaGGGCTGGGGCGCGCGGCAAGGGCCAGCACGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: DIYRRGRVQASS*GWGARQGPARP Trigger: TGGCCGTGCTGGCCCTTGCCGCGCGCCCCAGCCCCAGCTGCTCGCCTGGACCCGACCCCTCCGGTAAATGTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS CCA 72 bp | GGCAGCAGGTGGATGCGGGTGGTGTTCAGCAGGCGCTaGATGCGAGGGTTGCCCAGCAGGTACTCCGAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: GSRWMRVVFSRR*MRGLPSRYSEH Trigger: GTGCTCGGAGTACCTGCTGGGCAACCCTCGCATCCAGCGCCTGCTGAACACCACCCGCATCCACCTGCTGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS GCA 72 bp | TGCGGGTGGTGTTCAGCAGGCGCTGGATGCGAGGGTTaGCCAGCAGGTACTCCGAGCACAGGTACTGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: CGWCSAGAGCEG*PAGTPSTGTGP Trigger: TGGCCCAGTACCTGTGCTCGGAGTACCTGCTGGGCAACCCTCGCATCCAGCGCCTGCTGAACACCACCCGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS GCA 72 bp | GCAGGTGGATGCGGGTGGTGTTCAGCAGGCGCTGGATaGGAGGGTTGCCCAGCAGGTACTCCGAGCACAGGT | + |
|
Preference number: 6 (lower is better) Translates to: AGGCGWCSAGAG*EGCPAGTPSTG Trigger: ACCTGTGCTCGGAGTACCTGCTGGGCAACCCTCGCATCCAGCGCCTGCTGAACACCACCCGCATCCACCTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS CAA 72 bp | ATGCGGGTGGTGTTCAGCAGGCGCTGGATGCGAGGGTaGCCCAGCAGGTACTCCGAGCACAGGTACTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: MRVVFSRRWMRG*PSRYSEHRYWA Trigger: GGCCCAGTACCTGTGCTCGGAGTACCTGCTGGGCAACCCTCGCATCCAGCGCCTGCTGAACACCACCCGCAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS GCA 72 bp | CACACCCAACAGCATGTACTCAGGGCTAGACTCCACTaGCTCCCACGACCGGTGCTCCAGCGGTGTGGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: HTQQHVLRARLH*LPRPVLQRCGE Trigger: TTCCCCACACCGCTGGAGCACCGGTCGTGGGAGGCAGTGGAGTCTAGCCCTGAGTACATGCTGTTGGGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038676.7 ENSMUST00000132959.2 |
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| CDS CCA 72 bp | ACTCCACTGCCTCCCACGACCGGTGCTCCAGCGGTGTaGGGAACGATGTATGGTTATAGGCGGCATCCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: TPLPPTTGAPAV*GTMYGYRRHPH Trigger: GTGCGGATGCCGCCTATAACCATACATCGTTCCCCACACCGCTGGAGCACCGGTCGTGGGAGGCAGTGGAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038676.7 ENSMUST00000132959.2 |
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| CDS TCA 72 bp | ACGATGTATGGTTATAGGCGGCATCCGCACAGGTCCTaGGATGCAGGTCCACACAGGTGGCGGAGGGGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: TMYGYRRHPHRS*DAGPHRWRRGR Trigger: CCGACCCCTCCGCCACCTGTGTGGACCTGCATCTCAGGACCTGTGCGGATGCCGCCTATAACCATACATCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132959.2 |
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| CDS CCA 72 bp | CCTTGCCTTCAAAGCTGCGCCCAATGCTGTAGGTCTTaGCCACCTGGGAACAGCGGGCCGCTGTCCTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PCLQSCAQCCRS*PPGNSGPLSSS Trigger: TGAAGAGGACAGCGGCCCGCTGTTCCCAGGTGGCCAAGACCTACAGCATTGGGCGCAGCTTTGAAGGCAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS CCA 72 bp | CGGGGGCCACCTTACCCCACCAGTAGTACTGTGAGATaGGGATATGGTCTGTGCGCACACCACGAGTCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RGPPYPTSSTVR*GYGLCAHHESR Trigger: CCTCGACTCGTGGTGTGCGCACAGACCATATCCCCATCTCACAGTACTACTGGTGGGGTAAGGTGGCCCCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS TCA 72 bp | TCAGTTCATGCTGGCCTGGGCGGCTCGAGAACTCGATaGCCACCAGGTCCTTGCCTTCAAAGCTGCGCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: SVHAGLGGSRTR*PPGPCLQSCAQ Trigger: TTGGGCGCAGCTTTGAAGGCAAGGACCTGGTGGTCATCGAGTTCTCGAGCCGCCCAGGCCAGCATGAACTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS TCA 72 bp | GGAAGTTCTTGGGTCCTGTCGCCAGAGGATGGAGGATaGAGTCCACACGGCCGGCCTTCTTCATGCGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GSSWVLSPEDGG*SPHGRPSSCAR Trigger: CCTTGCGCATGAAGAAGGCCGGCCGTGTGGACTTCATCCTCCATCCTCTGGCGACAGGACCCAAGAACTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS CCA 72 bp | GAGCTTCACCTCAGGCTCCATCAGTTCATGCTGGCCTaGGCGGCTCGAGAACTCGATGACCACCAGGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: ELHLRLHQFMLA*AARELDDHQVL Trigger: AAGGACCTGGTGGTCATCGAGTTCTCGAGCCGCCCAGGCCAGCATGAACTGATGGAGCCTGAGGTGAAGCTC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS CAA 90 bp | TCCTGGAACCGAGGTAAAGCTCTCGAAGGTCCAGGAAGGAAGTTCTaGGGTCCTGTCGCCAGAGGATGGAGGATGAAGTCCACACGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SWNRGKALEGPGRKF*GPVARGWRMKSTRP Trigger: CGGCCGTGTGGACTTCATCCTCCATCCTCTGGCGACAGGACCCAAGAACTTCCTTCCTGGACCTTCGAGAGCTTTACCTCGGTTCCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS TCA 72 bp | ACAGAGCACCCTAGCAGCCGCAGGTCAGGGTTGCACTaGCCCTCCAGGAGAAAGTGTATCACACCCAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: TEHPSSRRSGLH*PSRRKCITPNS Trigger: GCTGTTGGGTGTGATACACTTTCTCCTGGAGGGTCAGTGCAACCCTGACCTGCGGCTGCTAGGGTGCTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038676.7 ENSMUST00000132959.2 |
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| CDS TCA 72 bp | CACCACGAGTCGAGGCCAGCCGGTAGTACTCTGACGTaGGGTCAGGGAAGTTGCGGTTCAGATCCAGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: HHESRPAGSTLT*GQGSCGSDPGS Trigger: AGAACCTGGATCTGAACCGCAACTTCCCTGACCTCACGTCAGAGTACTACCGGCTGGCCTCGACTCGTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS TCA 72 bp | GTACTTGAGCAGCCAGCGTGGCTTGTACGGGCTCAGTaGTGTGAAGTAAGCCCACCACCATGGCTTGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: VLEQPAWLVRAQ*CEVSPPPWLAP Trigger: GGGAGCAAGCCATGGTGGTGGGCTTACTTCACATCACTGAGCCCGTACAAGCCACGCTGGCTGCTCAAGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS GCA 72 bp | CCAACACAGAGCACCCTAGCAGCCGCAGGTCAGGGTTaGACTGACCCTCCAGGAGAAAGTGTATCACACCCA | + |
|
Preference number: 6 (lower is better) Translates to: PTQSTLAAAGQG*TDPPGESVSHP Trigger: TGGGTGTGATACACTTTCTCCTGGAGGGTCAGTGCAACCCTGACCTGCGGCTGCTAGGGTGCTCTGTGTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038676.7 ENSMUST00000132959.2 |
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| CDS GCA 72 bp | CCCACCAGTAGTACTGTGAGATGGGGATATGGTCTGTaGGCACACCACGAGTCGAGGCCAGCCGGTAGTACT | + |
|
Preference number: 6 (lower is better) Translates to: PTSSTVRWGYGL*AHHESRPAGST Trigger: AGTACTACCGGCTGGCCTCGACTCGTGGTGTGCGCACAGACCATATCCCCATCTCACAGTACTACTGGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS CCA 72 bp | CCAGGAAGGAAGTTCTTGGGTCCTGTCGCCAGAGGATaGAGGATGAAGTCCACACGGCCGGCCTTCTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: PGRKFLGPVARG*RMKSTRPAFFM Trigger: CATGAAGAAGGCCGGCCGTGTGGACTTCATCCTCCATCCTCTGGCGACAGGACCCAAGAACTTCCTTCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS TCA 72 bp | CTGAGAGGACGAAGGGAATGGTCTGTATCCACTTCATaGTGGCTTTGGTCTCGGGGGCCACCTTACCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: LRGRREWSVSTS*WLWSRGPPYPT Trigger: GGTGGGGTAAGGTGGCCCCCGAGACCAAAGCCATCATGAAGTGGATACAGACCATTCCCTTCGTCCTCTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS CAA 90 bp | TCTGTCACCATACCCTTGATGCCTCGGTGTACCATCTCCAGGAAGTaGAGTAGGGGCTCCTTGTTCTGTTGCCACAGGCCATACAGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SVTIPLMPRCTISRK*SRGSLFCCHRPYSA Trigger: GGCGCTGTATGGCCTGTGGCAACAGAACAAGGAGCCCCTACTCAACTTCCTGGAGATGGTACACCGAGGCATCAAGGGTATGGTGACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
||
| CDS TCA 72 bp | ACGATGTATGGTTATAGGCGGCATCCGCACAGGTCCTaGGATGCAGGTCCACACAGGTGGCACTGTGTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: TMYGYRRHPHRS*DAGPHRWHCVC Trigger: ACACACACAGTGCCACCTGTGTGGACCTGCATCTCAGGACCTGTGCGGATGCCGCCTATAACCATACATCGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
||
| CDS TCA 72 bp | CCCGTCCGGCCACCTCATTGCCATGAATGTTTCCAATaGGCTTCACCTCAGGCTCCATCAGTTCATGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PVRPPHCHECFQ*ASPQAPSVHAG Trigger: GCCAGCATGAACTGATGGAGCCTGAGGTGAAGCTCATTGGAAACATTCATGGCAATGAGGTGGCCGGACGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
||
| CDS GCA 72 bp | GGGAAGTTGCGGTTCAGATCCAGGTTCTGTGCATTCTaGCTTCCACTGGTCCAGCCATTGTATCCAGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: GKLRFRSRFCAF*LPLVQPLYPAP Trigger: GGGTGCTGGATACAATGGCTGGACCAGTGGAAGGCAGAATGCACAGAACCTGGATCTGAACCGCAACTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
||
| CDS CAA 72 bp | CGAGGTAAAGCTCTCGAAGGTCCAGGAAGGAAGTTCTaGGGTCCTGTCGCCAGAGGATGGAGGATGAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RGKALEGPGRKF*GPVARGWRMKS Trigger: GGACTTCATCCTCCATCCTCTGGCGACAGGACCCAAGAACTTCCTTCCTGGACCTTCGAGAGCTTTACCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS GCA 72 bp | CTCTTCCAGAGGGTCATAGCAGCCTTCCTCCTCTGGTaGGAAGTATTGGGCACAATCAAGGAAGTAGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: LFQRVIAAFLLW*EVLGTIKEVGP Trigger: TGGCCCTACTTCCTTGATTGTGCCCAATACTTCGCACCAGAGGAGGAAGGCTGCTATGACCCTCTGGAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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| CDS CAA 72 bp | ATACCCTTGATGCCTCGGTGTACCATCTCCAGGAAGTaGAGTAGGGGCTCCTTGTTCTGTTGCCACAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: IPLMPRCTISRK*SRGSLFCCHRP Trigger: TGGCCTGTGGCAACAGAACAAGGAGCCCCTACTCAACTTCCTGGAGATGGTACACCGAGGCATCAAGGGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038676.7 |
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