Pregenerated sensors for CPXM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030862Ensembl transcript IDs: ENSMUST00000033149.5, ENSMUST00000209155.2
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAAGCCCCCTCCCCCAGGGTCTGCTGCCCAGCACTCATTCTTGGGTaGTCTCCACTTCTGTCTGCTCTTAGGAAGACAAGCTTTGTTGGA | + |
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Preference number: 1 (lower is better) Translates to: QAPSPRVCCPALILG*SPLLSALRKTSFVG Trigger: TCCAACAAAGCTTGTCTTCCTAAGAGCAGACAGAAGTGGAGAGCACCCAAGAATGAGTGCTGGGCAGCAGACCCTGGGGGAGGGGGCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR TCA 90 bp | ACCCAGGGTTTGCTTCCTTCAAGGTCTTTTCCAAGATGCCCTGACTaGCTGCTCTGGCCTCCTAACATGTCTGGCTCTCCTCACCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: TQGLLPSRSFPRCPD*LLWPPNMSGSPHPR Trigger: CCTGGGGTGAGGAGAGCCAGACATGTTAGGAGGCCAGAGCAGTCAGTCAGGGCATCTTGGAAAAGACCTTGAAGGAAGCAAACCCTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR GCA 90 bp | TGGGGCAAAGGATTCCCTGGGTGCTGCAATGTCAACTGTGCCACTTaGAAATGCACTGGGAAGCTTGAATGTCACGCAAATGGGGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: WGKGFPGCCNVNCAT*KCTGKLECHANGGR Trigger: CCTTCCCCCATTTGCGTGACATTCAAGCTTCCCAGTGCATTTGCAAGTGGCACAGTTGACATTGCAGCACCCAGGGAATCCTTTGCCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR CCA 90 bp | GCAAGATGTGGCCGTCTGTATGTTCATCATTACTCCCCTCCTGATTaGGGCCAACTTGGAGCTCTCACATTCTGGAGCAAAAGGAACCCA | + |
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Preference number: 1 (lower is better) Translates to: ARCGRLYVHHYSPPD*GQLGALTFWSKRNP Trigger: TGGGTTCCTTTTGCTCCAGAATGTGAGAGCTCCAAGTTGGCCCCAATCAGGAGGGGAGTAATGATGAACATACAGACGGCCACATCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR CCA 90 bp | GTCAATAGAACACCGAGTGTGTACATAGCAGCTTGGCTTGTCCCCTaGGGCCAGAGAGGATGGATTTTCTTAGGCTGCATAAGAGCATCT | + |
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Preference number: 1 (lower is better) Translates to: VNRTPSVYIAAWLVP*GQRGWIFLGCIRAS Trigger: AGATGCTCTTATGCAGCCTAAGAAAATCCATCCTCTCTGGCCCCAGGGGACAAGCCAAGCTGCTATGTACACACTCGGTGTTCTATTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR TCA 90 bp | GGCAGCAGGATGAACACAGATAAGATACACTATTCCCTTACACAATaGTTCAACCACCTCTCCCAGACTGACGTGTCCCAGGTAATCCTA | + |
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Preference number: 1 (lower is better) Translates to: GSRMNTDKIHYSLTQ*FNHLSQTDVSQVIL Trigger: TAGGATTACCTGGGACACGTCAGTCTGGGAGAGGTGGTTGAATCATTGTGTAAGGGAATAGTGTATCTTATCTGTGTTCATCCTGCTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR CAA 90 bp | GATAGCAAGCCCCCTCCCCCAGGGTCTGCTGCCCAGCACTCATTCTaGGGTGCTCTCCACTTCTGTCTGCTCTTAGGAAGACAAGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: DSKPPPPGSAAQHSF*GALHFCLLLGRQAL Trigger: CAAAGCTTGTCTTCCTAAGAGCAGACAGAAGTGGAGAGCACCCAAGAATGAGTGCTGGGCAGCAGACCCTGGGGGAGGGGGCTTGCTATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR-3UTR CCA 90 bp | CCTCCCCCAGGGTCTGCTGCCCAGCACTCATTCTTGGGTGCTCTCCACTTCTGTTCCCTTCCTGGCCAGTaGTCAAGCACCCTTTTTAGA | + |
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Preference number: 2 (lower is better) Translates to: PPPGSAAQHSFLGALHFCSLPGQ*SSTLFR Trigger: TCTAAAAAGGGTGCTTGACCACTGGCCAGGAAGGGA...ACAGAAGTGGAGAGCACCCAAGAATGAGTGCTGGGCAGCAGACCCTGGGGGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR-3UTR GCA 90 bp | GTCACGCAAATGGGGGAAGGCCTGATTTCCCTTCCTGGCCAGTGGTCAAGCACCCCGGCCTTTCTCTGCTaGTCTGTTCAAGGTATTTGG | + |
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Preference number: 2 (lower is better) Translates to: VTQMGEGLISLPGQWSSTPAFLC*SVQGIW Trigger: CCAAATACCTTGAACAGAGCAGCAGAGAAAGGCCGG...GGTGCTTGACCACTGGCCAGGAAGGGAAATCAGGCCTTCCCCCATTTGCGTGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR CAA 90 bp | GGTGCTGCAATGTCAACTGTGCCACTTGCAAATGCACTGGGAAGCTaGAATGTCACGCAAATGGGGGAAGGCCTGATTTCCCTTCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: GAAMSTVPLANALGS*NVTQMGEGLISLPG Trigger: GCCAGGAAGGGAAATCAGGCCTTCCCCCATTTGCGTGACATTCAAGCTTCCCAGTGCATTTGCAAGTGGCACAGTTGACATTGCAGCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR-3UTR CCA 90 bp | TGGAGCAAAAGGAACCCAGGGTTTGCTTCCTTCAAGGTCTTTTCCAAGATGCCCGGTTTAGGGGCTTTCTaGGATAGCAAGCCCCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: WSKRNPGFASFKVFSKMPGLGAF*DSKPPP Trigger: GGGAGGGGGCTTGCTATCCCAGAAAGCCCCTAAACC...GGGCATCTTGGAAAAGACCTTGAAGGAAGCAAACCCTGGGTTCCTTTTGCTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR-3UTR GCA 90 bp | CTTTTCCAAGATGCCCTGACTGACTGCTCTGGCCTCCTAACATGTCTGGCTCTCCTGCAATGTCAACTGTaGCACTTGCAAATGCACTGG | + |
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Preference number: 2 (lower is better) Translates to: LFQDALTDCSGLLTCLALLQCQL*HLQMHW Trigger: CCAGTGCATTTGCAAGTGGCACAGTTGACATTGCAG...GAGAGCCAGACATGTTAGGAGGCCAGAGCAGTCAGTCAGGGCATCTTGGAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR-3UTR CCA 90 bp | ACATTCTGGAGCAAAAGGAACCCAGGGTTTGCTTCCTTCAAGGTCTTTTCCAAGGTGTACATAGCAGCTTaGCTTGTCCCCTGGGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: TFWSKRNPGFASFKVFSKVYIAA*LVPWGQ Trigger: CTGGCCCCAGGGGACAAGCCAAGCTGCTATGTACAC...CTTGGAAAAGACCTTGAAGGAAGCAAACCCTGGGTTCCTTTTGCTCCAGAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR-3UTR TCA 90 bp | GATGTGGCCGTCTGTATGTTCATCATTACTCCCCTCCTGATTGGGGCCAACTTGAAAAAGGAGCAGAGCTaGTTTAGGACTCAGCGATGC | + |
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Preference number: 2 (lower is better) Translates to: DVAVCMFIITPLLIGANLKKEQS*FRTQRC Trigger: GCATCGCTGAGTCCTAAATCAGCTCTGCTCCTTTTT...CAAGTTGGCCCCAATCAGGAGGGGAGTAATGATGAACATACAGACGGCCACATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR-3UTR GCA 90 bp | GATGTGGCCGTCTGTATGTTCATCATTACTCCCCTCCTGATTGGGGCCAACTTGGTCAACTGTGCCACTTaGAAATGCACTGGGAAGCTT | + |
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Preference number: 2 (lower is better) Translates to: DVAVCMFIITPLLIGANLVNCAT*KCTGKL Trigger: AAGCTTCCCAGTGCATTTGCAAGTGGCACAGTTGAC...CAAGTTGGCCCCAATCAGGAGGGGAGTAATGATGAACATACAGACGGCCACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR-3UTR TCA 90 bp | GCTGCAATGTCAACTGTGCCACTTGCAAATGCACTGGGAAGCTTGAATGTCACGCTCCTGAGTGTCTCTTaGATTACAGTCAAAACAACA | + |
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Preference number: 2 (lower is better) Translates to: AAMSTVPLANALGSLNVTLLSVS*ITVKTT Trigger: TGTTGTTTTGACTGTAATTCAAGAGACACTCAGGAG...CGTGACATTCAAGCTTCCCAGTGCATTTGCAAGTGGCACAGTTGACATTGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR-3UTR CCA 90 bp | GTGTTTGTTTGTTTCATTCTCTCCAGGTCAACAAGGCAGCAGGATGAACACAGATGGGGCCAGAGAGGATaGATTTTCTTAGGCTGCATA | + |
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Preference number: 2 (lower is better) Translates to: VFVCFILSRSTRQQDEHRWGQRG*IFLGCI Trigger: TATGCAGCCTAAGAAAATCCATCCTCTCTGGCCCCA...TCTGTGTTCATCCTGCTGCCTTGTTGACCTGGAGAGAATGAAACAAACAAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR-3UTR CCA 90 bp | ATGTCAACTGTGCCACTTGCAAATGCACTGGGAAGCTTGAATGTCACGCAAATGCTACAGAGTTACTACTaGAGTGGATTTTTATTTGCA | + |
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Preference number: 2 (lower is better) Translates to: MSTVPLANALGSLNVTQMLQSYY*SGFLFA Trigger: TGCAAATAAAAATCCACTCCAGTAGTAACTCTGTAG...CATTTGCGTGACATTCAAGCTTCCCAGTGCATTTGCAAGTGGCACAGTTGACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR-3UTR CAA 90 bp | CTTTTCCAAGATGCCCTGACTGACTGCTCTGGCCTCCTAACATGTCTGGCTCTCCACCAGCCCTCCCCTTaGGGGTCAGCCAAGCCATGC | + |
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Preference number: 3 (lower is better) Translates to: LFQDALTDCSGLLTCLALHQPSP*GSAKPC Trigger: GCATGGCTTGGCTGACCCCAAAGGGGAGGGCTGGTG...GAGAGCCAGACATGTTAGGAGGCCAGAGCAGTCAGTCAGGGCATCTTGGAAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR TCA 72 bp | GTGCAGGCCAGTGAGAGAGATTCTGGTTCCATAGCCTaGGGTGTGCAATGCAGTAGTGATGGCAGCGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: VQASERDSGSIA*GVQCSSDGSVL Trigger: CAGCACGCTGCCATCACTACTGCATTGCACACCTCAGGCTATGGAACCAGAATCTCTCTCACTGGCCTGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209155.2 |
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| 3UTR GCA 72 bp | TTCCTTCAAGGTCTTTTCCAAGATGCCCTGACTGACTaGTCTGGCCTCCTAACATGTCTGGCTCTCCTCACC | + |
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Preference number: 3 (lower is better) Translates to: FLQGLFQDALTD*SGLLTCLALLT Trigger: GGTGAGGAGAGCCAGACATGTTAGGAGGCCAGAGCAGTCAGTCAGGGCATCTTGGAAAAGACCTTGAAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR TCA 72 bp | GGCCAGTGGTCAAGCACCCTTTTTAGAATCTCAGACTaGCTCACTGAATTAATTCCCTCACTGCCACCGGCC | + |
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Preference number: 3 (lower is better) Translates to: GQWSSTLFRISD*LTELIPSLPPA Trigger: GGCCGGTGGCAGTGAGGGAATTAATTCAGTGAGTCAGTCTGAGATTCTAAAAAGGGTGCTTGACCACTGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR TCA 72 bp | TTGCTTCCTTCAAGGTCTTTTCCAAGATGCCCTGACTaGCTGCTCTGGCCTCCTAACATGTCTGGCTCTCCT | + |
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Preference number: 3 (lower is better) Translates to: LLPSRSFPRCPD*LLWPPNMSGSP Trigger: AGGAGAGCCAGACATGTTAGGAGGCCAGAGCAGTCAGTCAGGGCATCTTGGAAAAGACCTTGAAGGAAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR TCA 72 bp | ATGTGGCCGTCTGTATGTTCATCATTACTCCCCTCCTaGTTGGGGCCAACTTGGAGCTCTCACATTCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: MWPSVCSSLLPS*LGPTWSSHILE Trigger: CTCCAGAATGTGAGAGCTCCAAGTTGGCCCCAATCAGGAGGGGAGTAATGATGAACATACAGACGGCCACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR CCA 72 bp | GGCCGTCTGTATGTTCATCATTACTCCCCTCCTGATTaGGGCCAACTTGGAGCTCTCACATTCTGGAGCAAA | + |
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Preference number: 3 (lower is better) Translates to: GRLYVHHYSPPD*GQLGALTFWSK Trigger: TTTGCTCCAGAATGTGAGAGCTCCAAGTTGGCCCCAATCAGGAGGGGAGTAATGATGAACATACAGACGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR TCA 72 bp | CCCTTTGGGGTCAGCCAAGCCATGCAGGTATGCTCCTaGGTGTCTCTTGAATTACAGTCAAAACAACAGGGA | + |
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Preference number: 3 (lower is better) Translates to: PFGVSQAMQVCS*VSLELQSKQQG Trigger: TCCCTGTTGTTTTGACTGTAATTCAAGAGACACTCAGGAGCATACCTGCATGGCTTGGCTGACCCCAAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR GCA 72 bp | GGATTCCCTGGGTGCTGCAATGTCAACTGTGCCACTTaGAAATGCACTGGGAAGCTTGAATGTCACGCAAAT | + |
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Preference number: 3 (lower is better) Translates to: GFPGCCNVNCAT*KCTGKLECHAN Trigger: ATTTGCGTGACATTCAAGCTTCCCAGTGCATTTGCAAGTGGCACAGTTGACATTGCAGCACCCAGGGAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR GCA 72 bp | AATGATAACATCTGGGGCAAAGGATTCCCTGGGTGCTaGAATGTCAACTGTGCCACTTGCAAATGCACTGGG | + |
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Preference number: 3 (lower is better) Translates to: NDNIWGKGFPGC*NVNCATCKCTG Trigger: CCCAGTGCATTTGCAAGTGGCACAGTTGACATTGCAGCACCCAGGGAATCCTTTGCCCCAGATGTTATCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR TCA 72 bp | CAGCCAAGCCATGCAGGTATGCTCCTGAGTGTCTCTTaGATTACAGTCAAAACAACAGGGAAAGCCTGCTAC | + |
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Preference number: 3 (lower is better) Translates to: QPSHAGMLLSVS*ITVKTTGKACY Trigger: GTAGCAGGCTTTCCCTGTTGTTTTGACTGTAATTCAAGAGACACTCAGGAGCATACCTGCATGGCTTGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR GCA 72 bp | CCTGCTACAGAGTTACTACTGGAGTGGATTTTTATTTaGACGGTCTGGGGTATGTCTCAAGTGTCCGACAGG | + |
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Preference number: 3 (lower is better) Translates to: PATELLLEWIFI*TVWGMSQVSDR Trigger: CCTGTCGGACACTTGAGACATACCCCAGACCGTGCAAATAAAAATCCACTCCAGTAGTAACTCTGTAGCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR-3UTR CAA 90 bp | TGGAGCAAAAGGAACCCAGGGTTTGCTTCCTTCAAGGTCTTTTCCAAGATGCCCGCTCCTGAGTGTCTCTaGAATTACAGTCAAAACAAC | + |
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Preference number: 3 (lower is better) Translates to: WSKRNPGFASFKVFSKMPAPECL*NYSQNN Trigger: GTTGTTTTGACTGTAATTCAAGAGACACTCAGGAGC...GGGCATCTTGGAAAAGACCTTGAAGGAAGCAAACCCTGGGTTCCTTTTGCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR-3UTR CAA 90 bp | GTGTTTGTTTGTTTCATTCTCTCCAGGTCAACAAGGCAGCAGGATGAACACAGAAATGCACTGGGAAGCTaGAATGTCACGCAAATGGGG | + |
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Preference number: 3 (lower is better) Translates to: VFVCFILSRSTRQQDEHRNALGS*NVTQMG Trigger: CCCCATTTGCGTGACATTCAAGCTTCCCAGTGCATT...TCTGTGTTCATCCTGCTGCCTTGTTGACCTGGAGAGAATGAAACAAACAAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR GCA 72 bp | TCAAATGATAACATCTGGGGCAAAGGATTCCCTGGGTaGTGCAATGTCAACTGTGCCACTTGCAAATGCACT | + |
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Preference number: 3 (lower is better) Translates to: SNDNIWGKGFPG*CNVNCATCKCT Trigger: AGTGCATTTGCAAGTGGCACAGTTGACATTGCAGCACCCAGGGAATCCTTTGCCCCAGATGTTATCATTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR TCA 72 bp | CTTTATTCTCTAGAAATACAGAGTTGTGCAGGCCAGTaGGAGAGATTCTGGTTCCATAGCCTGAGGTGTGCA | + |
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Preference number: 3 (lower is better) Translates to: LYSLEIQSCAGQ*ERFWFHSLRCA Trigger: TGCACACCTCAGGCTATGGAACCAGAATCTCTCTCACTGGCCTGCACAACTCTGTATTTCTAGAGAATAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209155.2 |
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| 3UTR CCA 72 bp | CAACAGGGAAAGCCTGCTACAGAGTTACTACTGGAGTaGATTTTTATTTGCACGGTCTGGGGTATGTCTCAA | + |
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Preference number: 3 (lower is better) Translates to: QQGKPATELLLE*IFICTVWGMSQ Trigger: TTGAGACATACCCCAGACCGTGCAAATAAAAATCCACTCCAGTAGTAACTCTGTAGCAGGCTTTCCCTGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR TCA 72 bp | TTCCCTTACACAATGATTCAACCACCTCTCCCAGACTaGCGTGTCCCAGGTAATCCTAAGATTGCTTTCTTT | + |
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Preference number: 3 (lower is better) Translates to: FPYTMIQPPLPD*RVPGNPKIAFF Trigger: AAAGAAAGCAATCTTAGGATTACCTGGGACACGTCAGTCTGGGAGAGGTGGTTGAATCATTGTGTAAGGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR TCA 72 bp | ATGAACACAGATAAGATACACTATTCCCTTACACAATaGTTCAACCACCTCTCCCAGACTGACGTGTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: MNTDKIHYSLTQ*FNHLSQTDVSQ Trigger: CTGGGACACGTCAGTCTGGGAGAGGTGGTTGAATCATTGTGTAAGGGAATAGTGTATCTTATCTGTGTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR GCA 72 bp | ACTGAATTAATTCCCTCACTGCCACCGGCCTTTCTCTaGTGCTCTGTTCAAGGTATTTGGATAAATGAGAAC | + |
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Preference number: 3 (lower is better) Translates to: TELIPSLPPAFL*CSVQGIWINEN Trigger: GTTCTCATTTATCCAAATACCTTGAACAGAGCAGCAGAGAAAGGCCGGTGGCAGTGAGGGAATTAATTCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR GCA 72 bp | GAATTAATTCCCTCACTGCCACCGGCCTTTCTCTGCTaGTCTGTTCAAGGTATTTGGATAAATGAGAACAAA | + |
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Preference number: 3 (lower is better) Translates to: ELIPSLPPAFLC*SVQGIWINENK Trigger: TTTGTTCTCATTTATCCAAATACCTTGAACAGAGCAGCAGAGAAAGGCCGGTGGCAGTGAGGGAATTAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR TCA 72 bp | CCAGGTAATCCTAAGATTGCTTTCTTTTTCATCAGATaGTGCTTGATTGGCAAGATGTGGCCGTCTGTATGT | + |
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Preference number: 3 (lower is better) Translates to: PGNPKIAFFFIR*CLIGKMWPSVC Trigger: ACATACAGACGGCCACATCTTGCCAATCAAGCATCATCTGATGAAAAAGAAAGCAATCTTAGGATTACCTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR TCA 72 bp | TTGTTTCATTCTCTCCAGGTCAACAAGGCAGCAGGATaGACACAGATAAGATACACTATTCCCTTACACAAT | + |
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Preference number: 3 (lower is better) Translates to: LFHSLQVNKAAG*TQIRYTIPLHN Trigger: ATTGTGTAAGGGAATAGTGTATCTTATCTGTGTTCATCCTGCTGCCTTGTTGACCTGGAGAGAATGAAACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR TCA 72 bp | ATCCTAAGATTGCTTTCTTTTTCATCAGATGATGCTTaGTTGGCAAGATGTGGCCGTCTGTATGTTCATCAT | + |
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Preference number: 3 (lower is better) Translates to: ILRLLSFSSDDA*LARCGRLYVHH Trigger: ATGATGAACATACAGACGGCCACATCTTGCCAATCAAGCATCATCTGATGAAAAAGAAAGCAATCTTAGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR GCA 90 bp | GATGTGGCCGTCTGTATGTTCATCATTACTCCCCTCCTGATTGGGGCCAACTTGGGCCACCGCCACAAGTaGCAGGGCCAGCGCCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: DVAVCMFIITPLLIGANLGHRHK*QGQRQR Trigger: GCGCTGGCGCTGGCCCTGGCACTTGTGGCGGTGGCC...CAAGTTGGCCCCAATCAGGAGGGGAGTAATGATGAACATACAGACGGCCACATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR GCA 90 bp | CCTCCCCCAGGGTCTGCTGCCCAGCACTCATTCTTGGGTGCTCTCCACTTCTGTATTCTGCTGGTCCTCTaGCTCCCAGAGCAGCGAGTT | + |
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Preference number: 4 (lower is better) Translates to: PPPGSAAQHSFLGALHFCILLVL*LPEQRV Trigger: AACTCGCTGCTCTGGGAGGCAGAGGACCAGCAGAAT...ACAGAAGTGGAGAGCACCCAAGAATGAGTGCTGGGCAGCAGACCCTGGGGGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR TCA 90 bp | CTTTTCCAAGATGCCCTGACTGACTGCTCTGGCCTCCTAACATGTCTGGCTCTCGCCTGGAGGGTAGGCTaGCAGGCTGCTTCCCAAATG | + |
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Preference number: 4 (lower is better) Translates to: LFQDALTDCSGLLTCLALAWRVG*QAASQM Trigger: CATTTGGGAAGCAGCCTGTCAGCCTACCCTCCAGGC...GAGAGCCAGACATGTTAGGAGGCCAGAGCAGTCAGTCAGGGCATCTTGGAAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR TCA 90 bp | CCTCCCCCAGGGTCTGCTGCCCAGCACTCATTCTTGGGTGCTCTCCACTTCTGTTGGGGCACATTTCATTaGCAACCTTCATCAACTGGC | + |
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Preference number: 4 (lower is better) Translates to: PPPGSAAQHSFLGALHFCWGTFH*QPSSTG Trigger: GCCAGTTGATGAAGGTTGTCAATGAAATGTGCCCCA...ACAGAAGTGGAGAGCACCCAAGAATGAGTGCTGGGCAGCAGACCCTGGGGGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR GCA 90 bp | GTCACGCAAATGGGGGAAGGCCTGATTTCCCTTCCTGGCCAGTGGTCAAGCACCGGCCCTGGTGGCTTTTaGCAATGTTGTAAATCCTGG | + |
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Preference number: 4 (lower is better) Translates to: VTQMGEGLISLPGQWSSTGPGGF*QCCKSW Trigger: CCAGGATTTACAACATTGGCAAAAGCCACCAGGGCC...GGTGCTTGACCACTGGCCAGGAAGGGAAATCAGGCCTTCCCCCATTTGCGTGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR GCA 90 bp | GATGTGGCCGTCTGTATGTTCATCATTACTCCCCTCCTGATTGGGGCCAACTTGATTGCCGTGGGCCCCTaGGATGTAGTGGAACTCGGG | + |
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Preference number: 4 (lower is better) Translates to: DVAVCMFIITPLLIGANLIAVGP*DVVELG Trigger: CCCGAGTTCCACTACATCGCAGGGGCCCACGGCAAT...CAAGTTGGCCCCAATCAGGAGGGGAGTAATGATGAACATACAGACGGCCACATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR GCA 90 bp | GAGTGTGTACATAGCAGCTTGGCTTGTCCCCTGGGGCCAGAGAGGATGGATTTTTCCTGGCAGAGGAAGTaGAGCAGCAGCAGCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ECVHSSLACPLGPERMDFSWQRK*SSSSSS Trigger: ACTGCTGCTGCTGCTGCTGCACTTCCTCTGCCAGGA...AAAATCCATCCTCTCTGGCCCCAGGGGACAAGCCAAGCTGCTATGTACACACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
||
| CDS-3UTR CCA 90 bp | GTCACGCAAATGGGGGAAGGCCTGATTTCCCTTCCTGGCCAGTGGTCAAGCACCCACAGCCCACGTAGATaGACAGCTCAAAGCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VTQMGEGLISLPGQWSSTHSPRR*TAQSSL Trigger: CAAACTGCTTTGAGCTGTCCATCTACGTGGGCTGTG...GGTGCTTGACCACTGGCCAGGAAGGGAAATCAGGCCTTCCCCCATTTGCGTGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
||
| CDS-3UTR GCA 90 bp | GTCACGCAAATGGGGGAAGGCCTGATTTCCCTTCCTGGCCAGTGGTCAAGCACCACCCTAAGGTCTTCATaGATTGAAGGCGAGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VTQMGEGLISLPGQWSSTTLRSS*IEGEKS Trigger: GCTCTTCTCGCCTTCAATGCATGAAGACCTTAGGGT...GGTGCTTGACCACTGGCCAGGAAGGGAAATCAGGCCTTCCCCCATTTGCGTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
||
| CDS-3UTR CCA 90 bp | TGGAGCAAAAGGAACCCAGGGTTTGCTTCCTTCAAGGTCTTTTCCAAGATGCCCCTTGGGGCATTCTGCTaGTCCTCTGCCTCCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WSKRNPGFASFKVFSKMPLGAFC*SSASQS Trigger: GCTCTGGGAGGCAGAGGACCAGCAGAATGCCCCAAG...GGGCATCTTGGAAAAGACCTTGAAGGAAGCAAACCCTGGGTTCCTTTTGCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
||
| CDS-3UTR TCA 90 bp | CCTCCCCCAGGGTCTGCTGCCCAGCACTCATTCTTGGGTGCTCTCCACTTCTGTGCAGCTGGAAGTCTGTaGTTTTTAATGTTTCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PPPGSAAQHSFLGALHFCAAGSL*FLMFPD Trigger: GTCTGGAAACATTAAAAATCACAGACTTCCAGCTGC...ACAGAAGTGGAGAGCACCCAAGAATGAGTGCTGGGCAGCAGACCCTGGGGGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
||
| CDS-3UTR TCA 90 bp | GTCACGCAAATGGGGGAAGGCCTGATTTCCCTTCCTGGCCAGTGGTCAAGCACCTGTCATTGCTCACCATaGCTTTATAGGATGTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: VTQMGEGLISLPGQWSSTCHCSP*LYRMSP Trigger: GGGTGACATCCTATAAAGTCATGGTGAGCAATGACA...GGTGCTTGACCACTGGCCAGGAAGGGAAATCAGGCCTTCCCCCATTTGCGTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
||
| CDS-3UTR TCA 90 bp | GTCACGCAAATGGGGGAAGGCCTGATTTCCCTTCCTGGCCAGTGGTCAAGCACCCACCTTCCACAGAGATaGCAGCATTTGAAATCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VTQMGEGLISLPGQWSSTHLPQR*QHLKSL Trigger: AAGGGATTTCAAATGCTGTCATCTCTGTGGAAGGTG...GGTGCTTGACCACTGGCCAGGAAGGGAAATCAGGCCTTCCCCCATTTGCGTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
||
| CDS-3UTR GCA 90 bp | GTCACGCAAATGGGGGAAGGCCTGATTTCCCTTCCTGGCCAGTGGTCAAGCACCAGATCTCCATCCTCATaGAGATGCTCCCGTTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: VTQMGEGLISLPGQWSSTRSPSS*RCSRYQ Trigger: TTGATAACGGGAGCATCTGCATGAGGATGGAGATCT...GGTGCTTGACCACTGGCCAGGAAGGGAAATCAGGCCTTCCCCCATTTGCGTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
||
| CDS-3UTR CCA 90 bp | GCATCTCAAATGATAACATCTGGGGCAAAGGATTCCCTGGGTGCTGCAATGTCAGGCCACCATGGGGACTaGCAGCTCATTGAGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASQMITSGAKDSLGAAMSGHHGD*QLIEHR Trigger: CCTGTGCTCAATGAGCTGCCAGTCCCCATGGTGGCC...TGACATTGCAGCACCCAGGGAATCCTTTGCCCCAGATGTTATCATTTGAGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR CCA 90 bp | GAGTGTGTACATAGCAGCTTGGCTTGTCCCCTGGGGCCAGAGAGGATGGATTTTATATCGATGCCATCATaGGTCCAACGTCCCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ECVHSSLACPLGPERMDFISMPS*VQRPRD Trigger: GTCCCTGGGACGTTGGACCCATGATGGCATCGATAT...AAAATCCATCCTCTCTGGCCCCAGGGGACAAGCCAAGCTGCTATGTACACACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
||
| CDS-3UTR TCA 90 bp | CTTTTCCAAGATGCCCTGACTGACTGCTCTGGCCTCCTAACATGTCTGGCTCTCCTCTCACTATGCCTTTaGTGCCTCGATGAACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFQDALTDCSGLLTCLALLSLCL*CLDEPA Trigger: AGCAGGTTCATCGAGGCATCAAAGGCATAGTGAGAG...GAGAGCCAGACATGTTAGGAGGCCAGAGCAGTCAGTCAGGGCATCTTGGAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
||
| CDS-3UTR GCA 90 bp | GCTCTCACATTCTGGAGCAAAAGGAACCCAGGGTTTGCTTCCTTCAAGGTCTTTCTTCCAGCCACTGTGTaGCAGGAAGCCCCATTGACG | + |
|
Preference number: 4 (lower is better) Translates to: ALTFWSKRNPGFASFKVFLPATV*QEAPLT Trigger: CGTCAATGGGGCTTCCTGGCACACAGTGGCTGGAAG...AAAGACCTTGAAGGAAGCAAACCCTGGGTTCCTTTTGCTCCAGAATGTGAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
||
| CDS-3UTR CCA 90 bp | CTCTGGCCTCCTAACATGTCTGGCTCTCCTCACCCCAGGGCTAATGGAGCAGCAGTGGAGGCATGCAGCTaGAAGTCTGTGATTTTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LWPPNMSGSPHPRANGAAVEACS*KSVIFN Trigger: ATTAAAAATCACAGACTTCCAGCTGCATGCCTCCAC...TGCTGCTCCATTAGCCCTGGGGTGAGGAGAGCCAGACATGTTAGGAGGCCAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
||
| CDS-3UTR CCA 90 bp | CAAATGATAACATCTGGGGCAAAGGATTCCCTGGGTGCTGCAATGTCAACTGTGGTTGGGGACCTTCCTTaGGGCATTCTGCTGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QMITSGAKDSLGAAMSTVVGDLP*GILLVL Trigger: GAGGACCAGCAGAATGCCCCAAGGAAGGTCCCCAAC...CACAGTTGACATTGCAGCACCCAGGGAATCCTTTGCCCCAGATGTTATCATTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR CCA 90 bp | GAGTGTGTACATAGCAGCTTGGCTTGTCCCCTGGGGCCAGAGAGGATGGATTTTATGATCATCAGGTGTTaGGGTGTGCTCCTGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ECVHSSLACPLGPERMDFMIIRC*GVLLGL Trigger: AAGACCCAGGAGCACACCCCAACACCTGATGATCAT...AAAATCCATCCTCTCTGGCCCCAGGGGACAAGCCAAGCTGCTATGTACACACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
||
| CDS-3UTR TCA 90 bp | GCTCTCACATTCTGGAGCAAAAGGAACCCAGGGTTTGCTTCCTTCAAGGTCTTTGTGCCCTCCTCCTTCTaGAAATCTTCCGTGTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ALTFWSKRNPGFASFKVFVPSSF*KSSVWH Trigger: GTGCCACACGGAAGATTTTCAGAAGGAGGAGGGCAC...AAAGACCTTGAAGGAAGCAAACCCTGGGTTCCTTTTGCTCCAGAATGTGAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
||
| CDS-3UTR TCA 90 bp | TACAGAGTTACTACTGGAGTGGATTTTTATTTGCACGGTCTGGGGTATGTCTCAGCCAGGAAGCCCCATTaGCGGTGCCCTCCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YRVTTGVDFYLHGLGYVSARKPH*RCPPPS Trigger: AGAAGGAGGAGGGCACCGTCAATGGGGCTTCCTGGC...TGAGACATACCCCAGACCGTGCAAATAAAAATCCACTCCAGTAGTAACTCTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
||
| CDS-3UTR GCA 90 bp | ACAGAGTTACTACTGGAGTGGATTTTTATTTGCACGGTCTGGGGTATGTCTCAATGCTGGTGCGGCTCCTaGTGTTCCTGCTCCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: TELLLEWIFICTVWGMSQCWCGS*CSCSST Trigger: GGTGGAGGAGCAGGAACAGCAGGAGCCGCACCAGCA...TTGAGACATACCCCAGACCGTGCAAATAAAAATCCACTCCAGTAGTAACTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR GCA 90 bp | AAACAACAGGGAAAGCCTGCTACAGAGTTACTACTGGAGTGGATTTTTATTTGCCTGTGGCCCTGCTGGTaGGGCTCCTGCTGTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KQQGKPATELLLEWIFICLWPCW*GSCCSC Trigger: GCAGGAACAGCAGGAGCCGCACCAGCAGGGCCACAG...GCAAATAAAAATCCACTCCAGTAGTAACTCTGTAGCAGGCTTTCCCTGTTGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
||
| CDS-3UTR CCA 90 bp | CTTTTCCAAGATGCCCTGACTGACTGCTCTGGCCTCCTAACATGTCTGGCTCTCACAGTAACCCATGTGTaGCTGTCATTGCTCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: LFQDALTDCSGLLTCLALTVTHV*LSLLTM Trigger: CATGGTGAGCAATGACAGCCACACATGGGTTACTGT...GAGAGCCAGACATGTTAGGAGGCCAGAGCAGTCAGTCAGGGCATCTTGGAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR CCA 90 bp | TGCAATGCAGTAGTGATGGCAGCGTGCTGGAACACTGAATGCTTTCTTCAGGCTCAGCTCGCTCTCGTGTaGGTATTTATCACAGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CNAVVMAACWNTECFLQAQLALV*VFITAH Trigger: GTGGGCTGTGATAAATACCCACACGAGAGCGAGCTG...AGCCTGAAGAAAGCATTCAGTGTTCCAGCACGCTGCCATCACTACTGCATTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209155.2 |
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| CDS-3UTR TCA 90 bp | GCTCTCACATTCTGGAGCAAAAGGAACCCAGGGTTTGCTTCCTTCAAGGTCTTTAAGGTCTTCATGCATTaGAGGCGAGAAGAGCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ALTFWSKRNPGFASFKVFKVFMH*RREELR Trigger: CCGGAGCTCTTCTCGCCTTCAATGCATGAAGACCTT...AAAGACCTTGAAGGAAGCAAACCCTGGGTTCCTTTTGCTCCAGAATGTGAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR TCA 90 bp | ACATTCTGGAGCAAAAGGAACCCAGGGTTTGCTTCCTTCAAGGTCTTTTCCAAGAGCCAGCGGAACACATaGTCATCAGGTGTTGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TFWSKRNPGFASFKVFSKSQRNT*SSGVGV Trigger: CACCCCAACACCTGATGATCATGTGTTCCGCTGGCT...CTTGGAAAAGACCTTGAAGGAAGCAAACCCTGGGTTCCTTTTGCTCCAGAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR TCA 90 bp | TGCAATGCAGTAGTGATGGCAGCGTGCTGGAACACTGAATGCTTTCTTCAGGCTGATGAACCTGCTCCATaGACACAATCAGAGACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CNAVVMAACWNTECFLQADEPAP*TQSETP Trigger: GGGAGTCTCTGATTGTGTTCATGGAGCAGGTTCATC...AGCCTGAAGAAAGCATTCAGTGTTCCAGCACGCTGCCATCACTACTGCATTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209155.2 |
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| CDS-3UTR TCA 90 bp | TGCAATGCAGTAGTGATGGCAGCGTGCTGGAACACTGAATGCTTTCTTCAGGCTCCTTTGATGCCTCGATaGACCTGCTCCATGAACACA | + |
|
Preference number: 4 (lower is better) Translates to: CNAVVMAACWNTECFLQAPLMPR*TCSMNT Trigger: TGTGTTCATGGAGCAGGTTCATCGAGGCATCAAAGG...AGCCTGAAGAAAGCATTCAGTGTTCCAGCACGCTGCCATCACTACTGCATTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209155.2 |
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| CDS-3UTR TCA 90 bp | TGCAATGCAGTAGTGATGGCAGCGTGCTGGAACACTGAATGCTTTCTTCAGGCTCTCTCACTATGCCTTTaGTGCCTCGATGAACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CNAVVMAACWNTECFLQALSLCL*CLDEPA Trigger: AGCAGGTTCATCGAGGCATCAAAGGCATAGTGAGAG...AGCCTGAAGAAAGCATTCAGTGTTCCAGCACGCTGCCATCACTACTGCATTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209155.2 |
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| CDS-3UTR GCA 90 bp | GCTGCAATGTCAACTGTGCCACTTGCAAATGCACTGGGAAGCTTGAATGTCACGGGTAGGCTGACAGGCTaGTTCCCAAATGTCTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: AAMSTVPLANALGSLNVTGRLTG*FPNVSI Trigger: TATGGAGACATTTGGGAAGCAGCCTGTCAGCCTACC...CGTGACATTCAAGCTTCCCAGTGCATTTGCAAGTGGCACAGTTGACATTGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR CCA 90 bp | TGGAGCAAAAGGAACCCAGGGTTTGCTTCCTTCAAGGTCTTTTCCAAGATGCCCGAAACCACTCAGGGATaGCAATGTAGTGGTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: WSKRNPGFASFKVFSKMPETTQG*QCSGWG Trigger: TCCCCAACCACTACATTGCCATCCCTGAGTGGTTTC...GGGCATCTTGGAAAAGACCTTGAAGGAAGCAAACCCTGGGTTCCTTTTGCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR CCA 90 bp | GTGTTTGTTTGTTTCATTCTCTCCAGGTCAACAAGGCAGCAGGATGAACACAGACGGCTCTGGTCTCTGTaGCCACTGTGGCATTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VFVCFILSRSTRQQDEHRRLWSL*PLWHSQ Trigger: CTGAGAATGCCACAGTGGCCACAGAGACCAGAGCCG...TCTGTGTTCATCCTGCTGCCTTGTTGACCTGGAGAGAATGAAACAAACAAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR CCA 90 bp | AAACAACAGGGAAAGCCTGCTACAGAGTTACTACTGGAGTGGATTTTTATTTGCGTTGGGGTGTGCTCCTaGGTCTTCCACAGGGACCGC | + |
|
Preference number: 4 (lower is better) Translates to: KQQGKPATELLLEWIFICVGVCS*VFHRDR Trigger: GCGGTCCCTGTGGAAGACCCAGGAGCACACCCCAAC...GCAAATAAAAATCCACTCCAGTAGTAACTCTGTAGCAGGCTTTCCCTGTTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR CCA 90 bp | TGCAATGCAGTAGTGATGGCAGCGTGCTGGAACACTGAATGCTTTCTTCAGGCTCACAGCCCACGTAGATaGACAGCTCAAAGCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CNAVVMAACWNTECFLQAHSPRR*TAQSSL Trigger: CAAACTGCTTTGAGCTGTCCATCTACGTGGGCTGTG...AGCCTGAAGAAAGCATTCAGTGTTCCAGCACGCTGCCATCACTACTGCATTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209155.2 |
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| 3UTR CAA 72 bp | ATGTCAACTGTGCCACTTGCAAATGCACTGGGAAGCTaGAATGTCACGCAAATGGGGGAAGGCCTGATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MSTVPLANALGS*NVTQMGEGLIS Trigger: GGAAATCAGGCCTTCCCCCATTTGCGTGACATTCAAGCTTCCCAGTGCATTTGCAAGTGGCACAGTTGACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
||
| CDS-3UTR GCA 90 bp | GCATCTCAAATGATAACATCTGGGGCAAAGGATTCCCTGGGTGCTGCAATGTCACCATCCTCATGCAGATaGTCCCGTTATCAAACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASQMITSGAKDSLGAAMSPSSCR*SRYQTR Trigger: CCTGGTTTGATAACGGGAGCATCTGCATGAGGATGG...TGACATTGCAGCACCCAGGGAATCCTTTGCCCCAGATGTTATCATTTGAGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR CCA 90 bp | GCATCTCAAATGATAACATCTGGGGCAAAGGATTCCCTGGGTGCTGCAATGTCATTCCAGACCAAGAGGTaGGCAACTCTCTCTGACATC | + |
|
Preference number: 4 (lower is better) Translates to: ASQMITSGAKDSLGAAMSFQTKR*ATLSDI Trigger: GATGTCAGAGAGAGTTGCCCACCTCTTGGTCTGGAA...TGACATTGCAGCACCCAGGGAATCCTTTGCCCCAGATGTTATCATTTGAGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
||
| CDS-3UTR CCA 90 bp | GCTGCAATGTCAACTGTGCCACTTGCAAATGCACTGGGAAGCTTGAATGTCACGAATCCAGGTCATCCGTaGTGGTCATCTCATTACGTC | + |
|
Preference number: 4 (lower is better) Translates to: AAMSTVPLANALGSLNVTNPGHP*WSSHYV Trigger: GACGTAATGAGATGACCACCACGGATGACCTGGATT...CGTGACATTCAAGCTTCCCAGTGCATTTGCAAGTGGCACAGTTGACATTGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
||
| CDS-3UTR CCA 90 bp | ACATTCTGGAGCAAAAGGAACCCAGGGTTTGCTTCCTTCAAGGTCTTTTCCAAGCAGCTCGCTCTCGTGTaGGTATTTATCACAGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TFWSKRNPGFASFKVFSKQLALV*VFITAH Trigger: GTGGGCTGTGATAAATACCCACACGAGAGCGAGCTG...CTTGGAAAAGACCTTGAAGGAAGCAAACCCTGGGTTCCTTTTGCTCCAGAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
||
| 3UTR CAA 72 bp | GCCTGCTACAGAGTTACTACTGGAGTGGATTTTTATTaGCACGGTCTGGGGTATGTCTCAAGTGTCCGACAG | + |
|
Preference number: 4 (lower is better) Translates to: ACYRVTTGVDFY*HGLGYVSSVRQ Trigger: CTGTCGGACACTTGAGACATACCCCAGACCGTGCAAATAAAAATCCACTCCAGTAGTAACTCTGTAGCAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
||
| CDS-3UTR TCA 90 bp | CAGAGAGGATGGATTTTCTTAGGCTGCATAAGAGCATCTCAAATGATAACATCTTCTCCATCCAGGCGATaGCGGCTCTGGTCTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QRGWIFLGCIRASQMITSSPSRR*RLWSLW Trigger: CCACAGAGACCAGAGCCGTCATCGCCTGGATGGAGA...AGATGTTATCATTTGAGATGCTCTTATGCAGCCTAAGAAAATCCATCCTCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
||
| CDS-3UTR TCA 90 bp | ATGTCAACTGTGCCACTTGCAAATGCACTGGGAAGCTTGAATGTCACGCAAATGCCTTTGATGCCTCGATaGACCTGCTCCATGAACACA | + |
|
Preference number: 4 (lower is better) Translates to: MSTVPLANALGSLNVTQMPLMPR*TCSMNT Trigger: TGTGTTCATGGAGCAGGTTCATCGAGGCATCAAAGG...CATTTGCGTGACATTCAAGCTTCCCAGTGCATTTGCAAGTGGCACAGTTGACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
||
| CDS-3UTR TCA 90 bp | TGCAATGCAGTAGTGATGGCAGCGTGCTGGAACACTGAATGCTTTCTTCAGGCTCACCTTCCACAGAGATaGCAGCATTTGAAATCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CNAVVMAACWNTECFLQAHLPQR*QHLKSL Trigger: AAGGGATTTCAAATGCTGTCATCTCTGTGGAAGGTG...AGCCTGAAGAAAGCATTCAGTGTTCCAGCACGCTGCCATCACTACTGCATTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209155.2 |
||
| CDS-3UTR CCA 90 bp | GCATCTCAAATGATAACATCTGGGGCAAAGGATTCCCTGGGTGCTGCAATGTCAAGAGAGTTCCTTCCTTaGGTAATGACCCCTGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ASQMITSGAKDSLGAAMSREFLP*VMTPVN Trigger: GTTCACAGGGGTCATTACCCAAGGAAGGAACTCTCT...TGACATTGCAGCACCCAGGGAATCCTTTGCCCCAGATGTTATCATTTGAGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
||
| CDS-3UTR GCA 90 bp | CAGAGAGGATGGATTTTCTTAGGCTGCATAAGAGCATCTCAAATGATAACATCTGGCTCCTGCTGTTCCTaGTCCTCCACCCTAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QRGWIFLGCIRASQMITSGSCCS*SSTLRS Trigger: AGACCTTAGGGTGGAGGAGCAGGAACAGCAGGAGCC...AGATGTTATCATTTGAGATGCTCTTATGCAGCCTAAGAAAATCCATCCTCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
||
| CDS-3UTR GCA 90 bp | TACAGAGTTACTACTGGAGTGGATTTTTATTTGCACGGTCTGGGGTATGTCTCAAGGACTGAGGGTTTATaGGAATGTAGCGGGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: YRVTTGVDFYLHGLGYVSRTEGL*ECSGPP Trigger: TGGTGGCCCGCTACATTCGCATAAACCCTCAGTCCT...TGAGACATACCCCAGACCGTGCAAATAAAAATCCACTCCAGTAGTAACTCTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
||
| CDS-3UTR GCA 90 bp | CAGAGAGGATGGATTTTCTTAGGCTGCATAAGAGCATCTCAAATGATAACATCTTTCCTTGGGGCATTCTaGTGGTCCTCTGCCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QRGWIFLGCIRASQMITSFLGAF*WSSASQ Trigger: CTGGGAGGCAGAGGACCAGCAGAATGCCCCAAGGAA...AGATGTTATCATTTGAGATGCTCTTATGCAGCCTAAGAAAATCCATCCTCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
||
| CDS-3UTR CCA 90 bp | GTGTTTGTTTGTTTCATTCTCTCCAGGTCAACAAGGCAGCAGGATGAACACAGATCTCTGTGGCCACTGTaGCATTCTCAGACAGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: VFVCFILSRSTRQQDEHRSLWPL*HSQTET Trigger: GGTTTCTGTCTGAGAATGCCACAGTGGCCACAGAGA...TCTGTGTTCATCCTGCTGCCTTGTTGACCTGGAGAGAATGAAACAAACAAACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
||
| 3UTR CAA 72 bp | TCAGCCAAGCCATGCAGGTATGCTCCTGAGTGTCTCTaGAATTACAGTCAAAACAACAGGGAAAGCCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SAKPCRYAPECL*NYSQNNRESLL Trigger: TAGCAGGCTTTCCCTGTTGTTTTGACTGTAATTCAAGAGACACTCAGGAGCATACCTGCATGGCTTGGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
||
| CDS-3UTR GCA 90 bp | GTGTTTGTTTGTTTCATTCTCTCCAGGTCAACAAGGCAGCAGGATGAACACAGATTCGATGTGGAGGCATaGAGCTGGAAGTCTGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: VFVCFILSRSTRQQDEHRFDVEA*SWKSVI Trigger: AATCACAGACTTCCAGCTGCATGCCTCCACATCGAA...TCTGTGTTCATCCTGCTGCCTTGTTGACCTGGAGAGAATGAAACAAACAAACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR TCA 90 bp | AAACAACAGGGAAAGCCTGCTACAGAGTTACTACTGGAGTGGATTTTTATTTGCGATGAACCTGCTCCATaGACACAATCAGAGACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KQQGKPATELLLEWIFICDEPAP*TQSETP Trigger: GGGAGTCTCTGATTGTGTTCATGGAGCAGGTTCATC...GCAAATAAAAATCCACTCCAGTAGTAACTCTGTAGCAGGCTTTCCCTGTTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR GCA 90 bp | GCATCTCAAATGATAACATCTGGGGCAAAGGATTCCCTGGGTGCTGCAATGTCATTCTGCCTTTTCTGTTaGTATTTTTACCTGGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: ASQMITSGAKDSLGAAMSFCLFC*YFYLVE Trigger: CTCCACCAGGTAAAAATAGCAACAGAAAAGGCAGAA...TGACATTGCAGCACCCAGGGAATCCTTTGCCCCAGATGTTATCATTTGAGATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR CCA 90 bp | CAGAGAGGATGGATTTTCTTAGGCTGCATAAGAGCATCTCAAATGATAACATCTTCATTAATGCCTGCCTaGATGTTGAGTCTCCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QRGWIFLGCIRASQMITSSLMPA*MLSLPR Trigger: CCGGGGGAGACTCAACATCCAGGCAGGCATTAATGA...AGATGTTATCATTTGAGATGCTCTTATGCAGCCTAAGAAAATCCATCCTCTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| 3UTR CAA 72 bp | AGGAGCAGAGCTGATTTAGGACTCAGCGATGCACACTaGGTAATAAATGCCTCTATTGTCAATAGAACACCG | + |
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Preference number: 4 (lower is better) Translates to: RSRADLGLSDAH*VINASIVNRTP Trigger: CGGTGTTCTATTGACAATAGAGGCATTTATTACCAAGTGTGCATCGCTGAGTCCTAAATCAGCTCTGCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR CCA 90 bp | ACAGAGTTACTACTGGAGTGGATTTTTATTTGCACGGTCTGGGGTATGTCTCAACACCATGGTCATCACTaGCAGCTTTCTCAAGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: TELLLEWIFICTVWGMSQHHGHH*QLSQDS Trigger: AGAATCTTGAGAAAGCTGCCAGTGATGACCATGGTG...TTGAGACATACCCCAGACCGTGCAAATAAAAATCCACTCCAGTAGTAACTCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS TCA 90 bp | CGGCTCCTGCTGTTCCTGCTCCTCCACCCTAAGGTCTTCATGCATTaGAGGCGAGAAGAGCTCCGGCTCCGGCTCAGGCTCCGGATGCCC | + |
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Preference number: 5 (lower is better) Translates to: RLLLFLLLHPKVFMH*RREELRLRLRLRMP Trigger: GGGCATCCGGAGCCTGAGCCGGAGCCGGAGCTCTTCTCGCCTTCAATGCATGAAGACCTTAGGGTGGAGGAGCAGGAACAGCAGGAGCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS GCA 90 bp | TGGTGCGGCTCCTGCTGTTCCTGCTCCTCCACCCTAAGGTCTTCATaGATTGAAGGCGAGAAGAGCTCCGGCTCCGGCTCAGGCTCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: WCGSCCSCSSTLRSS*IEGEKSSGSGSGSG Trigger: TCCGGAGCCTGAGCCGGAGCCGGAGCTCTTCTCGCCTTCAATGCATGAAGACCTTAGGGTGGAGGAGCAGGAACAGCAGGAGCCGCACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS GCA 90 bp | CGGACGATGCGTGCGTTCTGCGCCGAGTATTCCTGGCAGAGGAAGTaGAGCAGCAGCAGCAGCAGTTCTCGTCCCAGAACCTCATTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RTMRAFCAEYSWQRK*SSSSSSSRPRTSLP Trigger: CGGCAATGAGGTTCTGGGACGAGAACTGCTGCTGCTGCTGCTGCACTTCCTCTGCCAGGAATACTCGGCGCAGAACGCACGCATCGTCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS CCA 90 bp | TCCTCCACCAAGCGGACGATGCGTGCGTTCTGCGCCGAGTATTCCTaGCAGAGGAAGTGCAGCAGCAGCAGCAGCAGTTCTCGTCCCAGA | + |
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Preference number: 5 (lower is better) Translates to: SSTKRTMRAFCAEYS*QRKCSSSSSSSRPR Trigger: TCTGGGACGAGAACTGCTGCTGCTGCTGCTGCACTTCCTCTGCCAGGAATACTCGGCGCAGAACGCACGCATCGTCCGCTTGGTGGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR CAA 90 bp | CTCTGGCCTCCTAACATGTCTGGCTCTCCTCACCCCAGGGCTAATGGAGCAGCAATGACCCCTGTGAACTaGGTCAGGCGCCGGGCATCC | + |
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Preference number: 5 (lower is better) Translates to: LWPPNMSGSPHPRANGAAMTPVN*VRRRAS Trigger: GGATGCCCGGCGCCTGACCAAGTTCACAGGGGTCAT...TGCTGCTCCATTAGCCCTGGGGTGAGGAGAGCCAGACATGTTAGGAGGCCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS GCA 90 bp | ATGTGGATTCGAGTCTCCTCCACCAAGCGGACGATGCGTGCGTTCTaGGCCGAGTATTCCTGGCAGAGGAAGTGCAGCAGCAGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: MWIRVSSTKRTMRAF*AEYSWQRKCSSSSS Trigger: GCTGCTGCTGCTGCTGCACTTCCTCTGCCAGGAATACTCGGCGCAGAACGCACGCATCGTCCGCTTGGTGGAGGAGACTCGAATCCACAT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS GCA 90 bp | GGGAGGGTAGAATGTGGATTCGAGTCTCCTCCACCAAGCGGACGATaGGTGCGTTCTGCGCCGAGTATTCCTGGCAGAGGAAGTGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GRVECGFESPPPSGR*VRSAPSIPGRGSAA Trigger: TGCTGCACTTCCTCTGCCAGGAATACTCGGCGCAGAACGCACGCATCGTCCGCTTGGTGGAGGAGACTCGAATCCACATTCTACCCTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS TCA 90 bp | TCTGAAAATCTTCCGTGTGGCACACTCGCCTCCTGGCATCTGTCATaGGGCGGTGAGTGGAGGCGTAGGAATACGCCAGCCAGCGGAACA | + |
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Preference number: 5 (lower is better) Translates to: SENLPCGTLASWHLS*GGEWRRRNTPASGT Trigger: TGTTCCGCTGGCTGGCGTATTCCTACGCCTCCACTCACCGCCTCATGACAGATGCCAGGAGGCGAGTGTGCCACACGGAAGATTTTCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS GCA 90 bp | TTGATGGCCTTCTTGGGAGTTCTGTGGCCCTGCTGGTGCGGCTCCTaGTGTTCCTGCTCCTCCACCCTAAGGTCTTCATGCATTGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LMAFLGVLWPCWCGS*CSCSSTLRSSCIEG Trigger: GCCTTCAATGCATGAAGACCTTAGGGTGGAGGAGCAGGAACAGCAGGAGCCGCACCAGCAGGGCCACAGAACTCCCAAGAAGGCCATCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS CCA 90 bp | GGCGTAGGAATACGCCAGCCAGCGGAACACATGATCATCAGGTGTTaGGGTGTGCTCCTGGGTCTTCCACAGGGACCGCACCATGTCATA | + |
|
Preference number: 5 (lower is better) Translates to: GVGIRQPAEHMIIRC*GVLLGLPQGPHHVI Trigger: TATGACATGGTGCGGTCCCTGTGGAAGACCCAGGAGCACACCCCAACACCTGATGATCATGTGTTCCGCTGGCTGGCGTATTCCTACGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR CAA 90 bp | GCTGCAATGTCAACTGTGCCACTTGCAAATGCACTGGGAAGCTTGAATGTCACGCGTCCCAGAACCTCATaGCCGTGGGCCCCTGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: AAMSTVPLANALGSLNVTRPRTS*PWAPAM Trigger: CATCGCAGGGGCCCACGGCAATGAGGTTCTGGGACG...CGTGACATTCAAGCTTCCCAGTGCATTTGCAAGTGGCACAGTTGACATTGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR CAA 90 bp | CCTCCCCCAGGGTCTGCTGCCCAGCACTCATTCTTGGGTGCTCTCCACTTCTGTATAAAGCCTTCCGCCTaGGCTGTGACCACATATTCG | + |
|
Preference number: 5 (lower is better) Translates to: PPPGSAAQHSFLGALHFCIKPSA*AVTTYS Trigger: CGAATATGTGGTCACAGCCAAGGCGGAAGGCTTTAT...ACAGAAGTGGAGAGCACCCAAGAATGAGTGCTGGGCAGCAGACCCTGGGGGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS GCA 90 bp | TTCCGTCCCCGCAGCTTCAGGCGCCTGGAGGGTAGGCTGACAGGCTaGTTCCCAAATGTCTCCATAATTTCTCTTATCCTAGCCAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: FRPRSFRRLEGRLTG*FPNVSIISLILARL Trigger: CAACCTGGCTAGGATAAGAGAAATTATGGAGACATTTGGGAAGCAGCCTGTCAGCCTACCCTCCAGGCGCCTGAAGCTGCGGGGACGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS CCA 90 bp | TGGCATTCTCAGACAGAAACCACTCAGGGATGGCAATGTAGTGGTTaGGGACCTTCCTTGGGGCATTCTGCTGGTCCTCTGCCTCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: WHSQTETTQGWQCSG*GPSLGHSAGPLPPR Trigger: TCTGGGAGGCAGAGGACCAGCAGAATGCCCCAAGGAAGGTCCCCAACCACTACATTGCCATCCCTGAGTGGTTTCTGTCTGAGAATGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR CAA 90 bp | GCTGCAATGTCAACTGTGCCACTTGCAAATGCACTGGGAAGCTTGAATGTCACGTGCCAGGAAGCCCCATaGACGGTGCCCTCCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AAMSTVPLANALGSLNVTCQEAP*TVPSSF Trigger: GAAGGAGGAGGGCACCGTCAATGGGGCTTCCTGGCA...CGTGACATTCAAGCTTCCCAGTGCATTTGCAAGTGGCACAGTTGACATTGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS TCA 90 bp | CCTCTGCCTCCCAGAGCAGCGAGTTTAAATCCGGAAAGTTGTTGTTaGTATCGATGCCATCATGGGTCCAACGTCCCAGGGACCAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: PLPPRAASLNPESCC*YRCHHGSNVPGTSL Trigger: GAGGCTGGTCCCTGGGACGTTGGACCCATGATGGCATCGATATCAACAACAACTTTCCGGATTTAAACTCGCTGCTCTGGGAGGCAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS CCA 90 bp | CCAGGACTGAGGGTTTATGCGAATGTAGCGGGCCACCATGGGGACTaGCAGCTCATTGAGCACAGGAATCTCCTTCTCACTGTTTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: PGLRVYANVAGHHGD*QLIEHRNLLLTVSF Trigger: GAAGGAAACAGTGAGAAGGAGATTCCTGTGCTCAATGAGCTGCCAGTCCCCATGGTGGCCCGCTACATTCGCATAAACCCTCAGTCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS CCA 90 bp | TCTCTGTGGCCACTGTGGCATTCTCAGACAGAAACCACTCAGGGATaGCAATGTAGTGGTTGGGGACCTTCCTTGGGGCATTCTGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SLWPLWHSQTETTQG*QCSGWGPSLGHSAG Trigger: ACCAGCAGAATGCCCCAAGGAAGGTCCCCAACCACTACATTGCCATCCCTGAGTGGTTTCTGTCTGAGAATGCCACAGTGGCCACAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR CAA 90 bp | TGGAGCAAAAGGAACCCAGGGTTTGCTTCCTTCAAGGTCTTTTCCAAGATGCCCGGCTTGATGGCCTTCTaGGGAGTTCTGTGGCCCTGC | + |
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Preference number: 5 (lower is better) Translates to: WSKRNPGFASFKVFSKMPGLMAF*GVLWPC Trigger: GCAGGGCCACAGAACTCCCAAGAAGGCCATCAAGCC...GGGCATCTTGGAAAAGACCTTGAAGGAAGCAAACCCTGGGTTCCTTTTGCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR CAA 90 bp | GATGTGGCCGTCTGTATGTTCATCATTACTCCCCTCCTGATTGGGGCCAACTTGGGGACTGGCAGCTCATaGAGCACAGGAATCTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: DVAVCMFIITPLLIGANLGTGSS*STGISF Trigger: GAAGGAGATTCCTGTGCTCAATGAGCTGCCAGTCCC...CAAGTTGGCCCCAATCAGGAGGGGAGTAATGATGAACATACAGACGGCCACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR CAA 90 bp | CAGAGAGGATGGATTTTCTTAGGCTGCATAAGAGCATCTCAAATGATAACATCTATGCCTGCCTGGATGTaGAGTCTCCCCCGGTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: QRGWIFLGCIRASQMITSMPAWM*SLPRWA Trigger: AGCCCACCGGGGGAGACTCAACATCCAGGCAGGCAT...AGATGTTATCATTTGAGATGCTCTTATGCAGCCTAAGAAAATCCATCCTCTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR CAA 90 bp | ACAGAGTTACTACTGGAGTGGATTTTTATTTGCACGGTCTGGGGTATGTCTCAACTCTTGGGAGCCTTCTaGGGCTTGATGGCCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TELLLEWIFICTVWGMSQLLGAF*GLMAFL Trigger: CAAGAAGGCCATCAAGCCCAAGAAGGCTCCCAAGAG...TTGAGACATACCCCAGACCGTGCAAATAAAAATCCACTCCAGTAGTAACTCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR CAA 90 bp | CAGAGAGGATGGATTTTCTTAGGCTGCATAAGAGCATCTCAAATGATAACATCTGGTTGGGGACCTTCCTaGGGGCATTCTGCTGGTCCT | + |
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Preference number: 5 (lower is better) Translates to: QRGWIFLGCIRASQMITSGWGPS*GHSAGP Trigger: AGGACCAGCAGAATGCCCCAAGGAAGGTCCCCAACC...AGATGTTATCATTTGAGATGCTCTTATGCAGCCTAAGAAAATCCATCCTCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR CAA 90 bp | AGCCTGCTACAGAGTTACTACTGGAGTGGATTTTTATTTGCACGGTCTGGGGTACTTATCCTAGCCAGGTaGGTCTTTGTGAGGGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: SLLQSYYWSGFLFARSGVLILAR*VFVRVK Trigger: CTTCACCCTCACAAAGACCAACCTGGCTAGGATAAG...TACCCCAGACCGTGCAAATAAAAATCCACTCCAGTAGTAACTCTGTAGCAGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS TCA 90 bp | ATCCCTTTCCCTTGTAAATCTCTCACTATGCCTTTGATGCCTCGATaGACCTGCTCCATGAACACAATCAGAGACTCCCGGTTATTCTCC | + |
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Preference number: 5 (lower is better) Translates to: IPFPCKSLTMPLMPR*TCSMNTIRDSRLFS Trigger: GGAGAATAACCGGGAGTCTCTGATTGTGTTCATGGAGCAGGTTCATCGAGGCATCAAAGGCATAGTGAGAGATTTACAAGGGAAAGGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033149.5 ENSMUST00000209155.2 |
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| CDS-3UTR CAA 90 bp | AAACAACAGGGAAAGCCTGCTACAGAGTTACTACTGGAGTGGATTTTTATTTGCACTAACTTCTCCCTCTaGGGAGCCTTCTTGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KQQGKPATELLLEWIFICTNFSL*GAFLGL Trigger: CAAGCCCAAGAAGGCTCCCAAGAGGGAGAAGTTAGT...GCAAATAAAAATCCACTCCAGTAGTAACTCTGTAGCAGGCTTTCCCTGTTGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR CAA 90 bp | CAAATGATAACATCTGGGGCAAAGGATTCCCTGGGTGCTGCAATGTCAACTGTGGCTTTCTCAAGATTCTaGCTTCTTCTGCCTTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QMITSGAKDSLGAAMSTVAFSRF*LLLPFL Trigger: CAGAAAAGGCAGAAGAAGCAAGAATCTTGAGAAAGC...CACAGTTGACATTGCAGCACCCAGGGAATCCTTTGCCCCAGATGTTATCATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR CAA 90 bp | ACATTCTGGAGCAAAAGGAACCCAGGGTTTGCTTCCTTCAAGGTCTTTTCCAAGTTGGGGCACATTTCATaGACAACCTTCATCAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: TFWSKRNPGFASFKVFSKLGHIS*TTFINW Trigger: CCAGTTGATGAAGGTTGTCAATGAAATGTGCCCCAA...CTTGGAAAAGACCTTGAAGGAAGCAAACCCTGGGTTCCTTTTGCTCCAGAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR CAA 90 bp | AAACAACAGGGAAAGCCTGCTACAGAGTTACTACTGGAGTGGATTTTTATTTGCTCCGGAAAGTTGTTGTaGATATCGATGCCATCATGG | + |
|
Preference number: 5 (lower is better) Translates to: KQQGKPATELLLEWIFICSGKLL*ISMPSW Trigger: CCATGATGGCATCGATATCAACAACAACTTTCCGGA...GCAAATAAAAATCCACTCCAGTAGTAACTCTGTAGCAGGCTTTCCCTGTTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS-3UTR CAA 90 bp | ACAGAGTTACTACTGGAGTGGATTTTTATTTGCACGGTCTGGGGTATGTCTCAAAAATCCGGAAAGTTGTaGTTGATATCGATGCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: TELLLEWIFICTVWGMSQKSGKL*LISMPS Trigger: TGATGGCATCGATATCAACAACAACTTTCCGGATTT...TTGAGACATACCCCAGACCGTGCAAATAAAAATCCACTCCAGTAGTAACTCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS TCA 72 bp | CTTCCGTGTGGCACACTCGCCTCCTGGCATCTGTCATaGGGCGGTGAGTGGAGGCGTAGGAATACGCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LPCGTLASWHLS*GGEWRRRNTPA Trigger: GGCTGGCGTATTCCTACGCCTCCACTCACCGCCTCATGACAGATGCCAGGAGGCGAGTGTGCCACACGGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS GCA 72 bp | TTGGGCTTGATGGCCTTCTTGGGAGTTCTGTGGCCCTaGTGGTGCGGCTCCTGCTGTTCCTGCTCCTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: LGLMAFLGVLWP*WCGSCCSCSST Trigger: GGTGGAGGAGCAGGAACAGCAGGAGCCGCACCAGCAGGGCCACAGAACTCCCAAGAAGGCCATCAAGCCCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS GCA 72 bp | CGAGTCTCCTCCACCAAGCGGACGATGCGTGCGTTCTaGGCCGAGTATTCCTGGCAGAGGAAGTGCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RVSSTKRTMRAF*AEYSWQRKCSS Trigger: GCTGCTGCACTTCCTCTGCCAGGAATACTCGGCGCAGAACGCACGCATCGTCCGCTTGGTGGAGGAGACTCG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS GCA 72 bp | CGTGCGTTCTGCGCCGAGTATTCCTGGCAGAGGAAGTaGAGCAGCAGCAGCAGCAGTTCTCGTCCCAGAACC | + |
|
Preference number: 6 (lower is better) Translates to: RAFCAEYSWQRK*SSSSSSSRPRT Trigger: GGTTCTGGGACGAGAACTGCTGCTGCTGCTGCTGCACTTCCTCTGCCAGGAATACTCGGCGCAGAACGCACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS TCA 72 bp | TGCCAGGAAGCCCCATTGACGGTGCCCTCCTCCTTCTaGAAATCTTCCGTGTGGCACACTCGCCTCCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: CQEAPLTVPSSF*KSSVWHTRLLA Trigger: TGCCAGGAGGCGAGTGTGCCACACGGAAGATTTTCAGAAGGAGGAGGGCACCGTCAATGGGGCTTCCTGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS GCA 72 bp | TTCTTGGGAGTTCTGTGGCCCTGCTGGTGCGGCTCCTaGTGTTCCTGCTCCTCCACCCTAAGGTCTTCATGC | + |
|
Preference number: 6 (lower is better) Translates to: FLGVLWPCWCGS*CSCSSTLRSSC Trigger: GCATGAAGACCTTAGGGTGGAGGAGCAGGAACAGCAGGAGCCGCACCAGCAGGGCCACAGAACTCCCAAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS GCA 72 bp | GTGGATTCGAGTCTCCTCCACCAAGCGGACGATGCGTaGGTTCTGCGCCGAGTATTCCTGGCAGAGGAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: VDSSLLHQADDA*VLRRVFLAEEV Trigger: CACTTCCTCTGCCAGGAATACTCGGCGCAGAACGCACGCATCGTCCGCTTGGTGGAGGAGACTCGAATCCAC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS CCA 72 bp | AAGCGGACGATGCGTGCGTTCTGCGCCGAGTATTCCTaGCAGAGGAAGTGCAGCAGCAGCAGCAGCAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: KRTMRAFCAEYS*QRKCSSSSSSS Trigger: AGAACTGCTGCTGCTGCTGCTGCACTTCCTCTGCCAGGAATACTCGGCGCAGAACGCACGCATCGTCCGCTT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS CAA 90 bp | ACTAACTTCTCCCTCTTGGGAGCCTTCTTGGGCTTGATGGCCTTCTaGGGAGTTCTGTGGCCCTGCTGGTGCGGCTCCTGCTGTTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TNFSLLGAFLGLMAF*GVLWPCWCGSCCSC Trigger: GCAGGAACAGCAGGAGCCGCACCAGCAGGGCCACAGAACTCCCAAGAAGGCCATCAAGCCCAAGAAGGCTCCCAAGAGGGAGAAGTTAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS CAA 90 bp | AGGCGTAGGAATACGCCAGCCAGCGGAACACATGATCATCAGGTGTaGGGGTGTGCTCCTGGGTCTTCCACAGGGACCGCACCATGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: RRRNTPASGTHDHQV*GCAPGSSTGTAPCH Trigger: ATGACATGGTGCGGTCCCTGTGGAAGACCCAGGAGCACACCCCAACACCTGATGATCATGTGTTCCGCTGGCTGGCGTATTCCTACGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS GCA 72 bp | TCCTGCTGTTCCTGCTCCTCCACCCTAAGGTCTTCATaGATTGAAGGCGAGAAGAGCTCCGGCTCCGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SCCSCSSTLRSS*IEGEKSSGSGS Trigger: TGAGCCGGAGCCGGAGCTCTTCTCGCCTTCAATGCATGAAGACCTTAGGGTGGAGGAGCAGGAACAGCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS GCA 72 bp | GAATGTGGATTCGAGTCTCCTCCACCAAGCGGACGATaGGTGCGTTCTGCGCCGAGTATTCCTGGCAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: ECGFESPPPSGR*VRSAPSIPGRG Trigger: TCCTCTGCCAGGAATACTCGGCGCAGAACGCACGCATCGTCCGCTTGGTGGAGGAGACTCGAATCCACATTC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS CAA 72 bp | GCAACTAACTTCTCCCTCTTGGGAGCCTTCTTGGGCTaGATGGCCTTCTTGGGAGTTCTGTGGCCCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: ATNFSLLGAFLG*MAFLGVLWPCW Trigger: CCAGCAGGGCCACAGAACTCCCAAGAAGGCCATCAAGCCCAAGAAGGCTCCCAAGAGGGAGAAGTTAGTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS CAA 72 bp | TGTCACCCAGTCACTCAGCCAGAGAGAGTTCCTTCCTaGGGTAATGACCCCTGTGAACTTGGTCAGGCGCCG | + |
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Preference number: 6 (lower is better) Translates to: CHPVTQPERVPS*GNDPCELGQAP Trigger: CGGCGCCTGACCAAGTTCACAGGGGTCATTACCCAAGGAAGGAACTCTCTCTGGCTGAGTGACTGGGTGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS GCA 72 bp | AGATGCTCCCGTTATCAAACCAGGACTGAGGGTTTATaGGAATGTAGCGGGCCACCATGGGGACTGGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: RCSRYQTRTEGL*ECSGPPWGLAA Trigger: AGCTGCCAGTCCCCATGGTGGCCCGCTACATTCGCATAAACCCTCAGTCCTGGTTTGATAACGGGAGCATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS CAA 90 bp | TTTATAGGATGTCACCCAGTCACTCAGCCAGAGAGAGTTCCTTCCTaGGGTAATGACCCCTGTGAACTTGGTCAGGCGCCGGGCATCCAC | + |
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Preference number: 6 (lower is better) Translates to: FIGCHPVTQPERVPS*GNDPCELGQAPGIH Trigger: GTGGATGCCCGGCGCCTGACCAAGTTCACAGGGGTCATTACCCAAGGAAGGAACTCTCTCTGGCTGAGTGACTGGGTGACATCCTATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS GCA 72 bp | GCAGTGGGCAGCCCAAGATCTCCATCCTCATGCAGATaGTCCCGTTATCAAACCAGGACTGAGGGTTTATGC | + |
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Preference number: 6 (lower is better) Translates to: AVGSPRSPSSCR*SRYQTRTEGLC Trigger: GCATAAACCCTCAGTCCTGGTTTGATAACGGGAGCATCTGCATGAGGATGGAGATCTTGGGCTGCCCACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS CCA 72 bp | AGGGTTTATGCGAATGTAGCGGGCCACCATGGGGACTaGCAGCTCATTGAGCACAGGAATCTCCTTCTCACT | + |
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Preference number: 6 (lower is better) Translates to: RVYANVAGHHGD*QLIEHRNLLLT Trigger: AGTGAGAAGGAGATTCCTGTGCTCAATGAGCTGCCAGTCCCCATGGTGGCCCGCTACATTCGCATAAACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS CCA 72 bp | GTTATTCTCCCATTCCTCCGGCAGCTCGCTCTCGTGTaGGTATTTATCACAGCCCACGTAGATGGACAGCTC | + |
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Preference number: 6 (lower is better) Translates to: VILPFLRQLALV*VFITAHVDGQL Trigger: GAGCTGTCCATCTACGTGGGCTGTGATAAATACCCACACGAGAGCGAGCTGCCGGAGGAATGGGAGAATAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033149.5 ENSMUST00000209155.2 |
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| CDS CAA 90 bp | TCCTCTGCCTCCCAGAGCAGCGAGTTTAAATCCGGAAAGTTGTTGTaGATATCGATGCCATCATGGGTCCAACGTCCCAGGGACCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: SSASQSSEFKSGKLL*ISMPSWVQRPRDQP Trigger: AGGCTGGTCCCTGGGACGTTGGACCCATGATGGCATCGATATCAACAACAACTTTCCGGATTTAAACTCGCTGCTCTGGGAGGCAGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS CAA 90 bp | TGGTCCTCTGCCTCCCAGAGCAGCGAGTTTAAATCCGGAAAGTTGTaGTTGATATCGATGCCATCATGGGTCCAACGTCCCAGGGACCAG | + |
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Preference number: 6 (lower is better) Translates to: WSSASQSSEFKSGKL*LISMPSWVQRPRDQ Trigger: CTGGTCCCTGGGACGTTGGACCCATGATGGCATCGATATCAACAACAACTTTCCGGATTTAAACTCGCTGCTCTGGGAGGCAGAGGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS CAA 90 bp | TGCTGGTCCTCTGCCTCCCAGAGCAGCGAGTTTAAATCCGGAAAGTaGTTGTTGATATCGATGCCATCATGGGTCCAACGTCCCAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: CWSSASQSSEFKSGK*LLISMPSWVQRPRD Trigger: GTCCCTGGGACGTTGGACCCATGATGGCATCGATATCAACAACAACTTTCCGGATTTAAACTCGCTGCTCTGGGAGGCAGAGGACCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS TCA 72 bp | GAATGTAGCGGGCCACCATGGGGACTGGCAGCTCATTaGGCACAGGAATCTCCTTCTCACTGTTTCCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: ECSGPPWGLAAH*AQESPSHCFLQ Trigger: TTGAAGGAAACAGTGAGAAGGAGATTCCTGTGCTCAATGAGCTGCCAGTCCCCATGGTGGCCCGCTACATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS CCA 72 bp | TGGAACTCGGGCTCACCAACTTCATGTTCCCCAGGATaGTCAGAGATCTCTACCGCATACAATTTCAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: WNSGSPTSCSPG*SEISTAYNFRP Trigger: GGGCCTGAAATTGTATGCGGTAGAGATCTCTGACCATCCTGGGGAACATGAAGTTGGTGAGCCCGAGTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS CAA 72 bp | GCCTCCCAGAGCAGCGAGTTTAAATCCGGAAAGTTGTaGTTGATATCGATGCCATCATGGGTCCAACGTCCC | + |
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Preference number: 6 (lower is better) Translates to: ASQSSEFKSGKL*LISMPSWVQRP Trigger: GGGACGTTGGACCCATGATGGCATCGATATCAACAACAACTTTCCGGATTTAAACTCGCTGCTCTGGGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS TCA 72 bp | TTAATGTTTCCAGACCAAGAGGTGGGCAACTCTCTCTaGCATCCTCATGAGCCACAGGGACACCATGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: LMFPDQEVGNSL*HPHEPQGHHGH Trigger: ATGACCATGGTGTCCCTGTGGCTCATGAGGATGTCAGAGAGAGTTGCCCACCTCTTGGTCTGGAAACATTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS CCA 72 bp | CATCCTCATGAGCCACAGGGACACCATGGTCATCACTaGCAGCTTTCTCAAGATTCTTGCTTCTTCTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: HPHEPQGHHGHH*QLSQDSCFFCL Trigger: AAGGCAGAAGAAGCAAGAATCTTGAGAAAGCTGCCAGTGATGACCATGGTGTCCCTGTGGCTCATGAGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS CAA 72 bp | TCCCAGAGCAGCGAGTTTAAATCCGGAAAGTTGTTGTaGATATCGATGCCATCATGGGTCCAACGTCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SQSSEFKSGKLL*ISMPSWVQRPR Trigger: CCTGGGACGTTGGACCCATGATGGCATCGATATCAACAACAACTTTCCGGATTTAAACTCGCTGCTCTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS CAA 72 bp | ATGCAGTTCTTGGTGGAAGTGATAAAGCCTTCCGCCTaGGCTGTGACCACATATTCGCCAGGGTTCAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: MQFLVEVIKPSA*AVTTYSPGFSR Trigger: TCTACTGAACCCTGGCGAATATGTGGTCACAGCCAAGGCGGAAGGCTTTATCACTTCCACCAAGAACTGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS CAA 90 bp | GCCACAGGGACACCATGGTCATCACTGGCAGCTTTCTCAAGATTCTaGCTTCTTCTGCCTTTTCTGTTGCTATTTTTACCTGGTGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: ATGTPWSSLAAFSRF*LLLPFLLLFLPGGG Trigger: GCCTCCACCAGGTAAAAATAGCAACAGAAAAGGCAGAAGAAGCAAGAATCTTGAGAAAGCTGCCAGTGATGACCATGGTGTCCCTGTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS TCA 72 bp | AGATGGACAGCTCAAAGCAGTTTGTATGGAGGTAGCTaGAATCGTTTAGACTTCCAGCCACTGTGTGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: RWTAQSSLYGGS*NRLDFQPLCAR Trigger: CCTGGCACACAGTGGCTGGAAGTCTAAACGATTTCAGCTACCTCCATACAAACTGCTTTGAGCTGTCCATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS CAA 72 bp | TCTGCCTCCCAGAGCAGCGAGTTTAAATCCGGAAAGTaGTTGTTGATATCGATGCCATCATGGGTCCAACGT | + |
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Preference number: 6 (lower is better) Translates to: SASQSSEFKSGK*LLISMPSWVQR Trigger: ACGTTGGACCCATGATGGCATCGATATCAACAACAACTTTCCGGATTTAAACTCGCTGCTCTGGGAGGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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| CDS CAA 72 bp | ACACCATGGTCATCACTGGCAGCTTTCTCAAGATTCTaGCTTCTTCTGCCTTTTCTGTTGCTATTTTTACCT | + |
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Preference number: 6 (lower is better) Translates to: TPWSSLAAFSRF*LLLPFLLLFLP Trigger: AGGTAAAAATAGCAACAGAAAAGGCAGAAGAAGCAAGAATCTTGAGAAAGCTGCCAGTGATGACCATGGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033149.5 |
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