Pregenerated sensors for CPXM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027408Ensembl transcript IDs: ENSMUST00000028897.8
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CCCCCTCCTCCTTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCGCAGGCCAGGATCTCTaGCCGGAGGCAAGGTGCACC | + |
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Preference number: 4 (lower is better) Translates to: PPPPSVLDRSSLSKDVALAGQDL*PEARCT Trigger: GGTGCACCTTGCCTCCGGGCAGAGATCCTGGCCTGC...GAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAAGGAGGAGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR CCA 90 bp | CGAAGCTTTAATGAGCCAGAGCACCTCTTCTACCCCGTCCCTCTCTCTTCCCCCAGGTCAATGCCCTGGTaGGTCCAGCGGCCCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: RSFNEPEHLFYPVPLSSPRSMPW*VQRPSA Trigger: GGCAGAGGGCCGCTGGACCCACCAGGGCATTGACCT...GGGGGAAGAGAGAGGGACGGGGTAGAAGAGGTGCTCTGGCTCATTAAAGCTTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR GCA 90 bp | CCTCCTTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCGACCAAAGGACTGGCTaGTGGAGGCCTCCAGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: PPSVLDRSSLSKDVALFSDQRTG*WRPPAG Trigger: GCCAGCTGGAGGCCTCCAGCAGCCAGTCCTTTGGTC...GCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAAGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR TCA 90 bp | CCTCCTCCTTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCGAGGCAGCAGGCGAATaGATCGAGCCACCTGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: PPPSVLDRSSLSKDVALFEAAGE*IEPPEA Trigger: AGCCTCAGGTGGCTCGATTCATTCGCCTGCTGCCTC...GAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAAGGAGGAGG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR TCA 90 bp | CCTCCTCCTTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCCATCTGGTGTGGGAGTaGGTTCACGAGCAGCCCACG | + |
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Preference number: 4 (lower is better) Translates to: PPPSVLDRSSLSKDVALFHLVWE*VHEQPT Trigger: CGTGGGCTGCTCGTGAACTCACTCCCACACCAGATG...GAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAAGGAGGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR TCA 90 bp | CCCCCTCCTCCTTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCCAGCATAGACAGTGCTaGGCCAGCGGAAGACAGCAT | + |
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Preference number: 4 (lower is better) Translates to: PPPPSVLDRSSLSKDVALQHRQC*ASGRQH Trigger: ATGCTGTCTTCCGCTGGCTCAGCACTGTCTATGCTG...GAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAAGGAGGAGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR TCA 90 bp | CCCCTCCTCCTTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTGAGAAGTCCTGGCTATaGCAAGGTCGGCGGTCGGTA | + |
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Preference number: 4 (lower is better) Translates to: PLLLQFWTGPACPRMWLSEKSWL*QGRRSV Trigger: TACCGACCGCCGACCTTGTCATAGCCAGGACTTCTC...AGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAAGGAGGAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR CCA 90 bp | CCTCCTTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCCGCCCCCATGGAGGTTaGCACTCAGCACAAACGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PPSVLDRSSLSKDVALFSRPHGG*HSAQTG Trigger: TCCCGTTTGTGCTGAGTGCCAACCTCCATGGGGGCG...GCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAAGGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR CCA 90 bp | CCCCTCCTCCTTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTACAAGCTCGCCCCCATaGAGGTTGGCACTCAGCACA | + |
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Preference number: 4 (lower is better) Translates to: PLLLQFWTGPACPRMWLSTSSPP*RLALST Trigger: TGTGCTGAGTGCCAACCTCCATGGGGGCGAGCTTGT...AGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAAGGAGGAGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR TCA 90 bp | CCCCCTCCTCCTTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTGGTGTGTAGGTAGCTaGAGTCGTTCATGCTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PPPPSVLDRSSLSKDVALWCVGS*SRSCSQ Trigger: CTGGGAGCATGAACGACTTCAGCTACCTACACACCA...GAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAAGGAGGAGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR GCA 90 bp | AGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTGAAGACGACGGCTGTGCAACGCTaGTGTGTGGAGCCAGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSGQVQPVQGCGSLQLKTTAVQR*CVEPGL Trigger: CAACCCTGGCTCCACACAGCAGCGTTGCACAGCCGT...CGTCTTCAGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR GCA 90 bp | GAAGCTTTAATGAGCCAGAGCACCTCTTCTACCCCGTCCCTCTCTCTTCCCCCTTGCCCGGAGGCAAGGTaGACCTCCCTGAAACCAGGT | + |
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Preference number: 4 (lower is better) Translates to: EALMSQSTSSTPSLSLPPCPEAR*TSLKPG Trigger: ACCTGGTTTCAGGGAGGTGCACCTTGCCTCCGGGCA...AGGGGGAAGAGAGAGGGACGGGGTAGAAGAGGTGCTCTGGCTCATTAAAGCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR GCA 90 bp | CTTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTGAAGGCTCGCCCAGCTCATaGTCCCCAGGATGGTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: LQFWTGPACPRMWLSSAEGSPSS*SPGWSD Trigger: GTCAGACCATCCTGGGGAGCATGAGCTGGGCGAGCC...TTCAGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR CCA 90 bp | CAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTGAAGACCCAAGACCAAAGGACTaGCTGCTGGAGGCCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: QFWTGPACPRMWLSSAEDPRPKD*LLEASS Trigger: GCTGGAGGCCTCCAGCAGCCAGTCCTTTGGTCTTGG...GTCTTCAGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR TCA 90 bp | CCTCCTCCTTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCCAGGTCATTAGGATCTaGGACTGGGCAGGCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PPPSVLDRSSLSKDVALFQVIRI*DWAGQD Trigger: ATCCTGGCCTGCCCAGTCTCAGATCCTAATGACCTG...GAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAAGGAGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR GCA 90 bp | CGAAGCTTTAATGAGCCAGAGCACCTCTTCTACCCCGTCCCTCTCTCTTCCCCCCCCAAGGGACCAGGGTaGCTTAGCTTCTTTCGCTTC | + |
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Preference number: 4 (lower is better) Translates to: RSFNEPEHLFYPVPLSSPPKGPG*LSFFRF Trigger: GAAGCGAAAGAAGCTAAGGCACCCTGGTCCCTTGGG...GGGGGAAGAGAGAGGGACGGGGTAGAAGAGGTGCTCTGGCTCATTAAAGCTTCG 57% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR GCA 90 bp | AGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTGAAGACGGAGCCGTCCTCGGTGTaGTCCAAGACCAAAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: SSGQVQPVQGCGSLQLKTEPSSV*SKTKGL Trigger: CAGTCCTTTGGTCTTGGAGCACACCGAGGACGGCTC...CGTCTTCAGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR GCA 90 bp | CCCCCTCCTCCTTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCCATCCATTTGATCACTaGCCACGTTTCAGGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PPPPSVLDRSSLSKDVALHPFDH*PRFRSH Trigger: GTGGCTCCTGAAACGTGGGCAGTGATCAAATGGATG...GAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAAGGAGGAGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR CCA 90 bp | GAAGCTTTAATGAGCCAGAGCACCTCTTCTACCCCGTCCCTCTCTCTTCCCCCTAGTGAGGGTCTTTGCTaGGTGAGTGGGCACCACAGG | + |
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Preference number: 4 (lower is better) Translates to: EALMSQSTSSTPSLSLPPSEGLC*VSGHHR Trigger: CCTGTGGTGCCCACTCACCCAGCAAAGACCCTCACT...AGGGGGAAGAGAGAGGGACGGGGTAGAAGAGGTGCTCTGGCTCATTAAAGCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR CCA 90 bp | AGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTGAAGACGCAAAGGACTGGCTGCTaGAGGCCTCCAGCTGGCTAT | + |
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Preference number: 4 (lower is better) Translates to: SSGQVQPVQGCGSLQLKTQRTGC*RPPAGY Trigger: ATAGCCAGCTGGAGGCCTCCAGCAGCCAGTCCTTTG...CGTCTTCAGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR CCA 90 bp | AGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTGAAGACGTTAAGGTCAATGCCCTaGTGGGTCCAGCGGCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSGQVQPVQGCGSLQLKTLRSMP*WVQRPS Trigger: AGAGGGCCGCTGGACCCACCAGGGCATTGACCTTAA...CGTCTTCAGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR CCA 90 bp | CTCCTTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTGTGGCAGGTGATGGTTaGGGACAGTGTCGGGTACCA | + |
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Preference number: 4 (lower is better) Translates to: LLQFWTGPACPRMWLSSAVAGDG*GQCRVP Trigger: TGGTACCCGACACTGTCCCCAACCATCACCTGCCAC...AGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR TCA 90 bp | CAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTGAAGACATGAATCGAGCCACCTaGGGCTCTGGCAGAAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: QFWTGPACPRMWLSSAEDMNRAT*GSGRRF Trigger: GAACCTTCTGCCAGAGCCTCAGGTGGCTCGATTCAT...GTCTTCAGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR TCA 90 bp | AGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTGAAGACGTGCTGTAGATGCGCGTaGTGTTGGGGCACTGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: SSGQVQPVQGCGSLQLKTCCRCA*CWGTAH Trigger: ATGAGCAGTGCCCCAACATCACGCGCATCTACAGCA...CGTCTTCAGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR GCA 90 bp | CTTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTGAAGAGAGTGAGGGTCTTTaGTGGGTGAGTGGGCACCAC | + |
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Preference number: 4 (lower is better) Translates to: LQFWTGPACPRMWLSSAEESEGL*WVSGHH Trigger: GTGGTGCCCACTCACCCAGCAAAGACCCTCACTCTC...TTCAGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR CCA 90 bp | GAAGCTTTAATGAGCCAGAGCACCTCTTCTACCCCGTCCCTCTCTCTTCCCCCTCTGGAGGCCTCCAGCTaGCTATCTGAAACCCTCAAG | + |
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Preference number: 4 (lower is better) Translates to: EALMSQSTSSTPSLSLPPLEASS*LSETLK Trigger: CTTGAGGGTTTCAGATAGCCAGCTGGAGGCCTCCAG...AGGGGGAAGAGAGAGGGACGGGGTAGAAGAGGTGCTCTGGCTCATTAAAGCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR CCA 90 bp | AGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTGAAGACGTCCTCCAGACCTGACTaGATATTGAGCCGTCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: SSGQVQPVQGCGSLQLKTSSRPD*ILSRPR Trigger: CCGAGGACGGCTCAATATCCAGTCAGGTCTGGAGGA...CGTCTTCAGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR TCA 90 bp | CCCCTCCTCCTTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTGAACTGGACCTTGAATaGTGTGACCCAGTCATACCT | + |
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Preference number: 4 (lower is better) Translates to: PLLLQFWTGPACPRMWLSELDLE*CDPVIP Trigger: AGGTATGACTGGGTCACATCATTCAAGGTCCAGTTC...AGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAAGGAGGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR TCA 90 bp | CCTCCTTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCCTCCCCAGGATGGTCTaGCATTTCCATCACATACAG | + |
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Preference number: 4 (lower is better) Translates to: PPSVLDRSSLSKDVALFSLPRMV*HFHHIQ Trigger: CTGTATGTGATGGAAATGTCAGACCATCCTGGGGAG...GCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAAGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR TCA 90 bp | CCTCCTCCTTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCTGCGCTTCATCCATTTaGTCACTGCCCACGTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: PPPSVLDRSSLSKDVALFCASSI*SLPTFQ Trigger: CTGAAACGTGGGCAGTGATCAAATGGATGAAGCGCA...GAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAAGGAGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR GCA 90 bp | TTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTGAAGGGTTCAGTGTCTTGTTaGTCAGCGCACCAAGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: FSSGQVQPVQGCGSLQLKGSVSC*SAHQAP Trigger: TGGCGCTTGGTGCGCTGAGCAACAAGACACTGAACC...CTTCAGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR CCA 90 bp | CAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTGAAGACATAGTAGGTAGGCAGTaGCAGGTGATGGTTGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: QFWTGPACPRMWLSSAEDIVGRQ*QVMVGD Trigger: GTCCCCAACCATCACCTGCCACTGCCTACCTACTAT...GTCTTCAGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR TCA 90 bp | CGAAGCTTTAATGAGCCAGAGCACCTCTTCTACCCCGTCCCTCTCTCTTCCCCCTTCTTTGCATCCACCTaGAGCCAAGGTTCAGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: RSFNEPEHLFYPVPLSSPFFAST*SQGSVS Trigger: AGACACTGAACCTTGGCTTCAGGTGGATGCAAAGAA...GGGGGAAGAGAGAGGGACGGGGTAGAAGAGGTGCTCTGGCTCATTAAAGCTTCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR TCA 90 bp | CTCCTTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTCCTGCTCCAGGTAGGTaGGAAGAGCATCTTTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: LLQFWTGPACPRMWLSSAPAPGR*EEHLCC Trigger: ACAACAAAGATGCTCTTCTCACCTACCTGGAGCAGG...AGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR TCA 90 bp | CCCCTCCTCCTTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCTTCAAAGGTGACCTaGCAGTGTTGTCTGACTGTA | + |
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Preference number: 4 (lower is better) Translates to: PLLLQFWTGPACPRMWLSSSKVT*QCCLTV Trigger: TACAGTCAGACAACACTGTCAGGTCACCTTTGAAGA...AGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAAGGAGGAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR TCA 90 bp | CCTCCTTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCCTTTGGGAGTCTTGGTaGGTAGGAAATTGCAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: PPSVLDRSSLSKDVALFSLWESW*VGNCRE Trigger: TTCCCTGCAATTTCCTACTCACCAAGACTCCCAAAG...GCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAAGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR GCA 90 bp | TTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTGAAGACTCGAAGCCGGACATaGCGTTCTGAGGTCTCATTT | + |
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Preference number: 4 (lower is better) Translates to: FSSGQVQPVQGCGSLQLKTRSRT*RSEVSF Trigger: AAATGAGACCTCAGAACGGCATGTCCGGCTTCGAGT...CTTCAGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR GCA 90 bp | AGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTGAAGACGGTGATGTTGGGGCACTaGTCATTCACCTGTTTCATC | + |
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Preference number: 4 (lower is better) Translates to: SSGQVQPVQGCGSLQLKTVMLGH*SFTCFI Trigger: GATGAAACAGGTGAATGAGCAGTGCCCCAACATCAC...CGTCTTCAGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR GCA 90 bp | AGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTGAAGACGTTGATGACGTTGCCATaGAAGGAGAAGTCCTGGCTA | + |
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Preference number: 4 (lower is better) Translates to: SSGQVQPVQGCGSLQLKTLMTLP*KEKSWL Trigger: TAGCCAGGACTTCTCCTTGCATGGCAACGTCATCAA...CGTCTTCAGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR CCA 90 bp | TTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTGAAGGAAGACAGCATCATCTaGTGTGGGAGTGAGTTCACG | + |
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Preference number: 4 (lower is better) Translates to: FSSGQVQPVQGCGSLQLKEDSII*CGSEFT Trigger: CGTGAACTCACTCCCACACCAGATGATGCTGTCTTC...CTTCAGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR TCA 90 bp | CAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTGAAGACACCACAGTTGTGTGTTaGGGTCAGCAAAATTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: QFWTGPACPRMWLSSAEDTTVVC*GQQNCG Trigger: ACCACAATTTTGCTGACCTCAACACACAACTGTGGT...GTCTTCAGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR CCA 90 bp | CAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTGAAGACCCTCGCAGGAACTCATaGCATAAGAACTGCATCAAA | + |
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Preference number: 4 (lower is better) Translates to: QFWTGPACPRMWLSSAEDPRRNS*HKNCIK Trigger: TTTGATGCAGTTCTTATGCCATGAGTTCCTGCGAGG...GTCTTCAGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR CCA 90 bp | GAAGCTTTAATGAGCCAGAGCACCTCTTCTACCCCGTCCCTCTCTCTTCCCCCTTCTCTGCGTCTGAATTaGCAGGAAATACTATGTCCA | + |
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Preference number: 4 (lower is better) Translates to: EALMSQSTSSTPSLSLPPSLRLN*QEILCP Trigger: TGGACATAGTATTTCCTGCCAATTCAGACGCAGAGA...AGGGGGAAGAGAGAGGGACGGGGTAGAAGAGGTGCTCTGGCTCATTAAAGCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR CCA 90 bp | TTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTGAAGAGCCATCAGGATTCATaGAGGGCAATAGATGGATTC | + |
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Preference number: 4 (lower is better) Translates to: FSSGQVQPVQGCGSLQLKSHQDS*RAIDGF Trigger: GAATCCATCTATTGCCCTCCATGAATCCTGATGGCT...CTTCAGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR CCA 90 bp | CTTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTGAAAGGTCAGCAAAATTGTaGTTAAGGTCAATGCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LQFWTGPACPRMWLSSAERSAKL*LRSMPW Trigger: CCAGGGCATTGACCTTAACCACAATTTTGCTGACCT...TTCAGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS-3UTR GCA 90 bp | AGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTGAAGACGTCATGGCATAAGAACTaGATCAAAAGCAGAAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSGQVQPVQGCGSLQLKTSWHKN*IKSRSN Trigger: GTTGCTTCTGCTTTTGATGCAGTTCTTATGCCATGA...CGTCTTCAGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS CCA 90 bp | GTGGAGCCAGGGTTGAGCCCGGCGCCAGGCCCGGCACTGAGGCGCTaGGAGCCCCCAGCCCCAGACCGACGGAAGGCGCAAAGGCGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VEPGLSPAPGPALRR*EPPAPDRRKAQRRS Trigger: TGACCGCCTTTGCGCCTTCCGTCGGTCTGGGGCTGGGGGCTCCCAGCGCCTCAGTGCCGGGCCTGGCGCCGGGCTCAACCCTGGCTCCAC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS GCA 90 bp | GCCGTTCTGAGGTCTCATTTGCCTTTGTGGACGGCTGTGCAACGCTaGTGTGTGGAGCCAGGGTTGAGCCCGGCGCCAGGCCCGGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: AVLRSHLPLWTAVQR*CVEPGLSPAPGPAL Trigger: CAGTGCCGGGCCTGGCGCCGGGCTCAACCCTGGCTCCACACAGCAGCGTTGCACAGCCGTCCACAAAGGCAAATGAGACCTCAGAACGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS-3UTR CAA 90 bp | CCCCTCCTCCTTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTGTGTGGAGCCAGGGTaGAGCCCGGCGCCAGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PLLLQFWTGPACPRMWLSCVEPG*SPAPGP Trigger: CGGGCCTGGCGCCGGGCTCAACCCTGGCTCCACACA...AGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAAGGAGGAGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS TCA 90 bp | CGAAGATCCCAGTGTGTGGGCCTCAGGGAACAGGTCATTAGGATCTaGGACTGGGCAGGCCAGGATCTCTGCCCGGAGGCAAGGTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: RRSQCVGLREQVIRI*DWAGQDLCPEARCT Trigger: GGTGCACCTTGCCTCCGGGCAGAGATCCTGGCCTGCCCAGTCTCAGATCCTAATGACCTGTTCCCTGAGGCCCACACACTGGGATCTTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS TCA 90 bp | CATCCTGGTTCTTGTTTCTCAGGGAGAGTGAGGGTCTTTGCTGGGTaGGTGGGCACCACAGGCCTAGCAGTCCCCAAGGGACCAGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: HPGSCFSGRVRVFAG*VGTTGLAVPKGPGC Trigger: GCACCCTGGTCCCTTGGGGACTGCTAGGCCTGTGGTGCCCACTCACCCAGCAAAGACCCTCACTCTCCCTGAGAAACAAGAACCAGGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS GCA 90 bp | AGGGGGACATCCTGGTTCTTGTTTCTCAGGGAGAGTGAGGGTCTTTaGTGGGTGAGTGGGCACCACAGGCCTAGCAGTCCCCAAGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: RGTSWFLFLRESEGL*WVSGHHRPSSPQGT Trigger: GGTCCCTTGGGGACTGCTAGGCCTGTGGTGCCCACTCACCCAGCAAAGACCCTCACTCTCCCTGAGAAACAAGAACCAGGATGTCCCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS CCA 90 bp | CGTGCCAGCATAGACAGTGCTGAGCCAGCGGAAGACAGCATCATCTaGTGTGGGAGTGAGTTCACGAGCAGCCCACGGAGTCCGAGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: RASIDSAEPAEDSII*CGSEFTSSPRSPSH Trigger: ATGACTCGGACTCCGTGGGCTGCTCGTGAACTCACTCCCACACCAGATGATGCTGTCTTCCGCTGGCTCAGCACTGTCTATGCTGGCACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS CCA 90 bp | GACTGGATATTGAGCCGTCCTCGGTGTGCTCCAAGACCAAAGGACTaGCTGCTGGAGGCCTCCAGCTGGCTATCTGAAACCCTCAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: DWILSRPRCAPRPKD*LLEASSWLSETLKD Trigger: GTCCTTGAGGGTTTCAGATAGCCAGCTGGAGGCCTCCAGCAGCCAGTCCTTTGGTCTTGGAGCACACCGAGGACGGCTCAATATCCAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS TCA 90 bp | TCGGCTCCATTGATGACGTTGCCATGCAAGGAGAAGTCCTGGCTATaGCAAGGTCGGCGGTCGGTATCCTGCATGGCCCTATTCGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SAPLMTLPCKEKSWL*QGRRSVSCMALFVP Trigger: TGGCACGAATAGGGCCATGCAGGATACCGACCGCCGACCTTGTCATAGCCAGGACTTCTCCTTGCATGGCAACGTCATCAATGGAGCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS TCA 90 bp | CATGGAGGTTGGCACTCAGCACAAACGGGATGCGCTTCATCCATTTaGTCACTGCCCACGTTTCAGGAGCCACGGTGGCATTGGGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: HGGWHSAQTGCASSI*SLPTFQEPRWHWAM Trigger: CATTGCCCAATGCCACCGTGGCTCCTGAAACGTGGGCAGTGATCAAATGGATGAAGCGCATCCCGTTTGTGCTGAGTGCCAACCTCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS CCA 90 bp | TTCAGGAGCCACGGTGGCATTGGGCAATGTATAGTAGGTAGGCAGTaGCAGGTGATGGTTGGGGACAGTGTCGGGTACCAGTCCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: FRSHGGIGQCIVGRQ*QVMVGDSVGYQSII Trigger: GATGATGGACTGGTACCCGACACTGTCCCCAACCATCACCTGCCACTGCCTACCTACTATACATTGCCCAATGCCACCGTGGCTCCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCTTTAATGAGCCAGAGCACCTCTTCTACCCCGTCCCTCTCTCTTCCCCCTAGACCTGACTGGATATaGAGCCGTCCTCGGTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: EALMSQSTSSTPSLSLPPRPDWI*SRPRCA Trigger: AGCACACCGAGGACGGCTCAATATCCAGTCAGGTCT...AGGGGGAAGAGAGAGGGACGGGGTAGAAGAGGTGCTCTGGCTCATTAAAGCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS-3UTR CAA 90 bp | CCCCTCCTCCTTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTCAGGTCTGGCTGTCATaGCTGAACTGGACCTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: PLLLQFWTGPACPRMWLSQVWLS*LNWTLN Trigger: ATTCAAGGTCCAGTTCAGCAATGACAGCCAGACCTG...AGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAAGGAGGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCTTTAATGAGCCAGAGCACCTCTTCTACCCCGTCCCTCTCTCTTCCCCCTTCTCGAAGCCTCTCTTaGGGAGTCTTGGTGAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: EALMSQSTSSTPSLSLPPSRSLS*GVLVSR Trigger: CCTACTCACCAAGACTCCCAAAGAGAGGCTTCGAGA...AGGGGGAAGAGAGAGGGACGGGGTAGAAGAGGTGCTCTGGCTCATTAAAGCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS-3UTR CAA 90 bp | CTTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTGAAGGGACATCCTGGTTCTaGTTTCTCAGGGAGAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LQFWTGPACPRMWLSSAEGTSWF*FLRESE Trigger: CTCACTCTCCCTGAGAAACAAGAACCAGGATGTCCC...TTCAGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS-3UTR CAA 90 bp | TTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTGAAGTTGGTGAGTAGGAAATaGCAGGGAACAGGGCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FSSGQVQPVQGCGSLQLKLVSRK*QGTGPS Trigger: AGAGGGCCCTGTTCCCTGCAATTTCCTACTCACCAA...CTTCAGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS-3UTR CAA 90 bp | CCTCCTTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCCTCTCTTTGGGAGTCTaGGTGAGTAGGAAATTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PPSVLDRSSLSKDVALFSLSLGV*VSRKLQ Trigger: CTGCAATTTCCTACTCACCAAGACTCCCAAAGAGAG...GCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAAGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS GCA 90 bp | GTTTCTGCCCTGTGTAACAATTCCTGCGAAGCGGACGGGATTCTTTaGATCCACCTGAAGCCAAGGTTCAGTGTCTTGTTGCTCAGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: VSALCNNSCEADGIL*IHLKPRFSVLLLSA Trigger: TGCGCTGAGCAACAAGACACTGAACCTTGGCTTCAGGTGGATGCAAAGAATCCCGTCCGCTTCGCAGGAATTGTTACACAGGGCAGAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS GCA 90 bp | CCAGTCATACCTCCACACAGAGTTTCTGCCCTGTGTAACAATTCCTaGGAAGCGGACGGGATTCTTTGCATCCACCTGAAGCCAAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PVIPPHRVSALCNNS*EADGILCIHLKPRF Trigger: GAACCTTGGCTTCAGGTGGATGCAAAGAATCCCGTCCGCTTCGCAGGAATTGTTACACAGGGCAGAAACTCTGTGTGGAGGTATGACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS GCA 90 bp | GTTGGCACTCAGCACAAACGGGATGCGCTTCATCCATTTGATCACTaGCCACGTTTCAGGAGCCACGGTGGCATTGGGCAATGTATAGTA | + |
|
Preference number: 5 (lower is better) Translates to: VGTQHKRDALHPFDH*PRFRSHGGIGQCIV Trigger: TACTATACATTGCCCAATGCCACCGTGGCTCCTGAAACGTGGGCAGTGATCAAATGGATGAAGCGCATCCCGTTTGTGCTGAGTGCCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS-3UTR CAA 90 bp | AGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTGAAGACGTTGCTGAACTGGACCTaGAATGATGTGACCCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSGQVQPVQGCGSLQLKTLLNWT*NDVTQS Trigger: TGACTGGGTCACATCATTCAAGGTCCAGTTCAGCAA...CGTCTTCAGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS-3UTR CAA 90 bp | CTCCTTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTGTCTCTGCGTCTGAATaGGCAGGAAATACTATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLQFWTGPACPRMWLSSAVSASE*AGNTMS Trigger: GGACATAGTATTTCCTGCCAATTCAGACGCAGAGAC...AGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS-3UTR CAA 90 bp | AGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTGAAGACGATGCGCTTCATCCATTaGATCACTGCCCACGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSGQVQPVQGCGSLQLKTMRFIH*ITAHVS Trigger: TGAAACGTGGGCAGTGATCAAATGGATGAAGCGCAT...CGTCTTCAGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS-3UTR CAA 90 bp | TTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTGAAGGGTGACCTGACAGTGTaGTCTGACTGTATGGTAACC | + |
|
Preference number: 5 (lower is better) Translates to: FSSGQVQPVQGCGSLQLKGDLTV*SDCMVT Trigger: GGTTACCATACAGTCAGACAACACTGTCAGGTCACC...CTTCAGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS-3UTR CAA 90 bp | CAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTGAAGACTTGAGGTCAGCAAAATaGTGGTTAAGGTCAATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QFWTGPACPRMWLSSAEDLRSAK*WLRSMP Trigger: GGGCATTGACCTTAACCACAATTTTGCTGACCTCAA...GTCTTCAGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS TCA 90 bp | CACCTGAGGCTCTGGCAGAAGGTTCAACACTGGGGTCTCTGCGTCTaGATTGGCAGGAAATACTATGTCCATTCCAGTACTGTTCCTACT | + |
|
Preference number: 5 (lower is better) Translates to: HLRLWQKVQHWGLCV*IGRKYYVHSSTVPT Trigger: AGTAGGAACAGTACTGGAATGGACATAGTATTTCCTGCCAATTCAGACGCAGAGACCCCAGTGTTGAACCTTCTGCCAGAGCCTCAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS GCA 90 bp | CAGGTGATGGTTGGGGACAGTGTCGGGTACCAGTCCATCATCCTCTaGATACCACAGTTGTGTGTTGAGGTCAGCAAAATTGTGGTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: QVMVGDSVGYQSIIL*IPQLCVEVSKIVVK Trigger: CTTAACCACAATTTTGCTGACCTCAACACACAACTGTGGTATGCAGAGGATGATGGACTGGTACCCGACACTGTCCCCAACCATCACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS CCA 90 bp | GAGGCTCTGGCAGAAGGTTCAACACTGGGGTCTCTGCGTCTGAATTaGCAGGAAATACTATGTCCATTCCAGTACTGTTCCTACTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EALAEGSTLGSLRLN*QEILCPFQYCSYSS Trigger: GGAAGAGTAGGAACAGTACTGGAATGGACATAGTATTTCCTGCCAATTCAGACGCAGAGACCCCAGTGTTGAACCTTCTGCCAGAGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS-3UTR CAA 90 bp | CTTCAGTTCTGGACAGGTCCAGCCTGTCCAAGGATGTGGCTCTCTTCAGCTGAATACCACAGTTGTGTGTaGAGGTCAGCAAAATTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LQFWTGPACPRMWLSSAEYHSCV*RSAKLW Trigger: CCACAATTTTGCTGACCTCAACACACAACTGTGGTA...TTCAGCTGAAGAGAGCCACATCCTTGGACAGGCTGGACCTGTCCAGAACTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS CAA 90 bp | TTGCCTTTGTGGACGGCTGTGCAACGCTGCTGTGTGGAGCCAGGGTaGAGCCCGGCGCCAGGCCCGGCACTGAGGCGCTGGGAGCCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LPLWTAVQRCCVEPG*SPAPGPALRRWEPP Trigger: TGGGGGCTCCCAGCGCCTCAGTGCCGGGCCTGGCGCCGGGCTCAACCCTGGCTCCACACAGCAGCGTTGCACAGCCGTCCACAAAGGCAA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS GCA 72 bp | GACTGGGCAGGCCAGGATCTCTGCCCGGAGGCAAGGTaGACCTCCCTGAAACCAGGTCTGAGGCAGCAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: DWAGQDLCPEAR*TSLKPGLRQQA Trigger: CGCCTGCTGCCTCAGACCTGGTTTCAGGGAGGTGCACCTTGCCTCCGGGCAGAGATCCTGGCCTGCCCAGTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS CCA 72 bp | CTGTCCCCTCAGCCGCTCCAGCTTCCTCCGAAGGTCTaGGGGCAACTTCCCTCGTGTTGCCAACAGTTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: LSPQPLQLPPKV*GQLPSCCQQFS Trigger: CGAGAACTGTTGGCAACACGAGGGAAGTTGCCCCCAGACCTTCGGAGGAAGCTGGAGCGGCTGAGGGGACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS TCA 72 bp | CAGTGTGTGGGCCTCAGGGAACAGGTCATTAGGATCTaGGACTGGGCAGGCCAGGATCTCTGCCCGGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: QCVGLREQVIRI*DWAGQDLCPEA Trigger: TGCCTCCGGGCAGAGATCCTGGCCTGCCCAGTCTCAGATCCTAATGACCTGTTCCCTGAGGCCCACACACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS GCA 72 bp | GCCGTCCTCGGTGTGCTCCAAGACCAAAGGACTGGCTaGTGGAGGCCTCCAGCTGGCTATCTGAAACCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: AVLGVLQDQRTG*WRPPAGYLKPS Trigger: TGAGGGTTTCAGATAGCCAGCTGGAGGCCTCCAGCAGCCAGTCCTTTGGTCTTGGAGCACACCGAGGACGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS CCA 72 bp | GCCGGACATGCCGTTCTGAGGTCTCATTTGCCTTTGTaGACGGCTGTGCAACGCTGCTGTGTGGAGCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: AGHAVLRSHLPL*TAVQRCCVEPG Trigger: CCCTGGCTCCACACAGCAGCGTTGCACAGCCGTCCACAAAGGCAAATGAGACCTCAGAACGGCATGTCCGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS TCA 72 bp | TCTTGTTTCTCAGGGAGAGTGAGGGTCTTTGCTGGGTaGGTGGGCACCACAGGCCTAGCAGTCCCCAAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SCFSGRVRVFAG*VGTTGLAVPKG Trigger: TCCCTTGGGGACTGCTAGGCCTGTGGTGCCCACTCACCCAGCAAAGACCCTCACTCTCCCTGAGAAACAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS TCA 72 bp | CACCTCCCTGAAACCAGGTCTGAGGCAGCAGGCGAATaGATCGAGCCACCTGAGGCTCTGGCAGAAGGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: HLPETRSEAAGE*IEPPEALAEGS Trigger: TGAACCTTCTGCCAGAGCCTCAGGTGGCTCGATTCATTCGCCTGCTGCCTCAGACCTGGTTTCAGGGAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS TCA 72 bp | CCTGCATGGCCCTATTCGTGCCAGCATAGACAGTGCTaGGCCAGCGGAAGACAGCATCATCTGGTGTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PAWPYSCQHRQC*ASGRQHHLVWE Trigger: CTCCCACACCAGATGATGCTGTCTTCCGCTGGCTCAGCACTGTCTATGCTGGCACGAATAGGGCCATGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS GCA 72 bp | TCCTGGTTCTTGTTTCTCAGGGAGAGTGAGGGTCTTTaGTGGGTGAGTGGGCACCACAGGCCTAGCAGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: SWFLFLRESEGL*WVSGHHRPSSP Trigger: GGGACTGCTAGGCCTGTGGTGCCCACTCACCCAGCAAAGACCCTCACTCTCCCTGAGAAACAAGAACCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS CAA 72 bp | GAAGCCGGACATGCCGTTCTGAGGTCTCATTTGCCTTaGTGGACGGCTGTGCAACGCTGCTGTGTGGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: EAGHAVLRSHLP*WTAVQRCCVEP Trigger: TGGCTCCACACAGCAGCGTTGCACAGCCGTCCACAAAGGCAAATGAGACCTCAGAACGGCATGTCCGGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS TCA 72 bp | GATTCATGGAGGGCAATAGATGGATTCGTGTCTCAGTaGGCAGCCGAGTCACTCTCGGGTCCCCTCGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: DSWRAIDGFVSQ*AAESLSGPLAG Trigger: TCCTGCGAGGGGACCCGAGAGTGACTCGGCTGCTCACTGAGACACGAATCCATCTATTGCCCTCCATGAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS CCA 72 bp | CACGGTGGCATTGGGCAATGTATAGTAGGTAGGCAGTaGCAGGTGATGGTTGGGGACAGTGTCGGGTACCAG | + |
|
Preference number: 6 (lower is better) Translates to: HGGIGQCIVGRQ*QVMVGDSVGYQ Trigger: CTGGTACCCGACACTGTCCCCAACCATCACCTGCCACTGCCTACCTACTATACATTGCCCAATGCCACCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS CAA 72 bp | GCTTCCTCCGAAGGTCTGGGGGCAACTTCCCTCGTGTaGCCAACAGTTCTCGAAGCCTCTCTTTGGGAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ASSEGLGATSLV*PTVLEASLWES Trigger: AGACTCCCAAAGAGAGGCTTCGAGAACTGTTGGCAACACGAGGGAAGTTGCCCCCAGACCTTCGGAGGAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS CAA 90 bp | GACGGGATTCTTTGCATCCACCTGAAGCCAAGGTTCAGTGTCTTGTaGCTCAGCGCACCAAGCGCCATCATACAGGTCACCGTCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: DGILCIHLKPRFSVL*LSAPSAIIQVTVLQ Trigger: CTGGAGGACGGTGACCTGTATGATGGCGCTTGGTGCGCTGAGCAACAAGACACTGAACCTTGGCTTCAGGTGGATGCAAAGAATCCCGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS CAA 90 bp | CCATGGAGGTTGGCACTCAGCACAAACGGGATGCGCTTCATCCATTaGATCACTGCCCACGTTTCAGGAGCCACGGTGGCATTGGGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: PWRLALSTNGMRFIH*ITAHVSGATVALGN Trigger: ATTGCCCAATGCCACCGTGGCTCCTGAAACGTGGGCAGTGATCAAATGGATGAAGCGCATCCCGTTTGTGCTGAGTGCCAACCTCCATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS CAA 90 bp | GGGGGCAACTTCCCTCGTGTTGCCAACAGTTCTCGAAGCCTCTCTTaGGGAGTCTTGGTGAGTAGGAAATTGCAGGGAACAGGGCCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GGNFPRVANSSRSLS*GVLVSRKLQGTGPS Trigger: AGAGGGCCCTGTTCCCTGCAATTTCCTACTCACCAAGACTCCCAAAGAGAGGCTTCGAGAACTGTTGGCAACACGAGGGAAGTTGCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
||
| CDS TCA 72 bp | TGGCACTCAGCACAAACGGGATGCGCTTCATCCATTTaGTCACTGCCCACGTTTCAGGAGCCACGGTGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: WHSAQTGCASSI*SLPTFQEPRWH Trigger: ATGCCACCGTGGCTCCTGAAACGTGGGCAGTGATCAAATGGATGAAGCGCATCCCGTTTGTGCTGAGTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS TCA 72 bp | TTGATGACGTTGCCATGCAAGGAGAAGTCCTGGCTATaGCAAGGTCGGCGGTCGGTATCCTGCATGGCCCTA | + |
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Preference number: 6 (lower is better) Translates to: LMTLPCKEKSWL*QGRRSVSCMAL Trigger: TAGGGCCATGCAGGATACCGACCGCCGACCTTGTCATAGCCAGGACTTCTCCTTGCATGGCAACGTCATCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS GCA 72 bp | GGCACCACAGGCCTAGCAGTCCCCAAGGGACCAGGGTaGCTTAGCTTCTTTCGCTTCTTGACAACGATCTTT | + |
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Preference number: 6 (lower is better) Translates to: GTTGLAVPKGPG*LSFFRFLTTIF Trigger: AAAGATCGTTGTCAAGAAGCGAAAGAAGCTAAGGCACCCTGGTCCCTTGGGGACTGCTAGGCCTGTGGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS GCA 72 bp | CAGCACAAACGGGATGCGCTTCATCCATTTGATCACTaGCCACGTTTCAGGAGCCACGGTGGCATTGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: QHKRDALHPFDH*PRFRSHGGIGQ Trigger: TTGCCCAATGCCACCGTGGCTCCTGAAACGTGGGCAGTGATCAAATGGATGAAGCGCATCCCGTTTGTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS GCA 72 bp | CTTCCTCCGAAGGTCTGGGGGCAACTTCCCTCGTGTTaGCAACAGTTCTCGAAGCCTCTCTTTGGGAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: LPPKVWGQLPSC*QQFSKPLFGSL Trigger: AAGACTCCCAAAGAGAGGCTTCGAGAACTGTTGGCAACACGAGGGAAGTTGCCCCCAGACCTTCGGAGGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS CAA 72 bp | TTGGCACTCAGCACAAACGGGATGCGCTTCATCCATTaGATCACTGCCCACGTTTCAGGAGCCACGGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: LALSTNGMRFIH*ITAHVSGATVA Trigger: TGCCACCGTGGCTCCTGAAACGTGGGCAGTGATCAAATGGATGAAGCGCATCCCGTTTGTGCTGAGTGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS CAA 72 bp | TTCATGCTCCCAGGAACTGTGTGCCAGTCGGCTCCATaGATGACGTTGCCATGCAAGGAGAAGTCCTGGCTA | + |
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Preference number: 6 (lower is better) Translates to: FMLPGTVCQSAP*MTLPCKEKSWL Trigger: TAGCCAGGACTTCTCCTTGCATGGCAACGTCATCAATGGAGCCGACTGGCACACAGTTCCTGGGAGCATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS GCA 72 bp | CCTCCACACAGAGTTTCTGCCCTGTGTAACAATTCCTaGGAAGCGGACGGGATTCTTTGCATCCACCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: PPHRVSALCNNS*EADGILCIHLK Trigger: CTTCAGGTGGATGCAAAGAATCCCGTCCGCTTCGCAGGAATTGTTACACAGGGCAGAAACTCTGTGTGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS CAA 90 bp | TTCCCTCGTGTTGCCAACAGTTCTCGAAGCCTCTCTTTGGGAGTCTaGGTGAGTAGGAAATTGCAGGGAACAGGGCCCTCTTCAAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: FPRVANSSRSLSLGV*VSRKLQGTGPSSKV Trigger: CACCTTTGAAGAGGGCCCTGTTCCCTGCAATTTCCTACTCACCAAGACTCCCAAAGAGAGGCTTCGAGAACTGTTGGCAACACGAGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS CAA 90 bp | GTGTCGGGTACCAGTCCATCATCCTCTGCATACCACAGTTGTGTGTaGAGGTCAGCAAAATTGTGGTTAAGGTCAATGCCCTGGTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: VSGTSPSSSAYHSCV*RSAKLWLRSMPWWV Trigger: GACCCACCAGGGCATTGACCTTAACCACAATTTTGCTGACCTCAACACACAACTGTGGTATGCAGAGGATGATGGACTGGTACCCGACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS CAA 90 bp | GAAATTGCAGGGAACAGGGCCCTCTTCAAAGGTGACCTGACAGTGTaGTCTGACTGTATGGTAACCCTCAGCACTGGCTGTCACCACATA | + |
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Preference number: 6 (lower is better) Translates to: EIAGNRALFKGDLTV*SDCMVTLSTGCHHI Trigger: TATGTGGTGACAGCCAGTGCTGAGGGTTACCATACAGTCAGACAACACTGTCAGGTCACCTTTGAAGAGGGCCCTGTTCCCTGCAATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS TCA 72 bp | CCAACAGTTCTCGAAGCCTCTCTTTGGGAGTCTTGGTaGGTAGGAAATTGCAGGGAACAGGGCCCTCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: PTVLEASLWESW*VGNCREQGPLQ Trigger: TTGAAGAGGGCCCTGTTCCCTGCAATTTCCTACTCACCAAGACTCCCAAAGAGAGGCTTCGAGAACTGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS CAA 90 bp | TCCATTCCAGTACTGTTCCTACTCTTCCACCAGGTCTGGCTGTCATaGCTGAACTGGACCTTGAATGATGTGACCCAGTCATACCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: SIPVLFLLFHQVWLS*LNWTLNDVTQSYLH Trigger: GTGGAGGTATGACTGGGTCACATCATTCAAGGTCCAGTTCAGCAATGACAGCCAGACCTGGTGGAAGAGTAGGAACAGTACTGGAATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS CAA 72 bp | GTACTGTTCCTACTCTTCCACCAGGTCTGGCTGTCATaGCTGAACTGGACCTTGAATGATGTGACCCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: VLFLLFHQVWLS*LNWTLNDVTQS Trigger: TGACTGGGTCACATCATTCAAGGTCCAGTTCAGCAATGACAGCCAGACCTGGTGGAAGAGTAGGAACAGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS TCA 72 bp | CTCTGGCAGAAGGTTCAACACTGGGGTCTCTGCGTCTaGATTGGCAGGAAATACTATGTCCATTCCAGTACT | + |
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Preference number: 6 (lower is better) Translates to: LWQKVQHWGLCV*IGRKYYVHSST Trigger: AGTACTGGAATGGACATAGTATTTCCTGCCAATTCAGACGCAGAGACCCCAGTGTTGAACCTTCTGCCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS CAA 72 bp | GGCAGAAGGTTCAACACTGGGGTCTCTGCGTCTGAATaGGCAGGAAATACTATGTCCATTCCAGTACTGTTC | + |
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Preference number: 6 (lower is better) Translates to: GRRFNTGVSASE*AGNTMSIPVLF Trigger: GAACAGTACTGGAATGGACATAGTATTTCCTGCCAATTCAGACGCAGAGACCCCAGTGTTGAACCTTCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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| CDS CAA 72 bp | ACCAGTCCATCATCCTCTGCATACCACAGTTGTGTGTaGAGGTCAGCAAAATTGTGGTTAAGGTCAATGCCC | + |
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Preference number: 6 (lower is better) Translates to: TSPSSSAYHSCV*RSAKLWLRSMP Trigger: GGGCATTGACCTTAACCACAATTTTGCTGACCTCAACACACAACTGTGGTATGCAGAGGATGATGGACTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028897.8 |
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