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Pregenerated sensors for CPXCR1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000072995

Ensembl transcript IDs: ENSMUST00000101269.2

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp GGCTACATATTTTTGTTTTACAGATGCATTATGTTGGTGACATTCTaGCTGAGAGAAATTTCTGCTGCACAGCAGGTGAATAATCATCCT +
Preference number: 5 (lower is better)
Translates to: GYIFLFYRCIMLVTF*LREISAAQQVNNHP
Trigger: AGGATGATTATTCACCTGCTGTGCAGCAGAAATTTCTCTCAGGCAGAATGTCACCAACATAATGCATCTGTAAAACAAAAATATGTAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000101269.2
CDS CCA 72 bp GTAAAGAATGGGACTCGCCACCTAAGAAAACAGGGATaGATCATCTTGTCAAGTATGGGGGTGTGGAAGCAA +
Preference number: 6 (lower is better)
Translates to: VKNGTRHLRKQG*IILSSMGVWKQ
Trigger: TTGCTTCCACACCCCCATACTTGACAAGATGATCCATCCCTGTTTTCTTAGGTGGCGAGTCCCATTCTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000101269.2
CDS TCA 72 bp TGGCTGTTTTGTACTGTCTGGAAATCCATATCCTCCTaGGAACTTATTGAGCTTGGCTCCATGCCGGATAGA +
Preference number: 6 (lower is better)
Translates to: WLFCTVWKSISS*ELIELGSMPDR
Trigger: TCTATCCGGCATGGAGCCAAGCTCAATAAGTTCTCAGGAGGATATGGATTTCCAGACAGTACAAAACAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101269.2
CDS CCA 72 bp AGTATTCTGGGTTTGGAGCTGTGGCATGTAGAATCTTaGCCTCACAAAAAGATGGTTTCCATTCTTGTGTTG +
Preference number: 6 (lower is better)
Translates to: SILGLELWHVES*PHKKMVSILVL
Trigger: CAACACAAGAATGGAAACCATCTTTTTGTGAGGCCAAGATTCTACATGCCACAGCTCCAAACCCAGAATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000101269.2
CDS CAA 72 bp CAGTATTCTGGGTTTGGAGCTGTGGCATGTAGAATCTaGGCCTCACAAAAAGATGGTTTCCATTCTTGTGTT +
Preference number: 6 (lower is better)
Translates to: QYSGFGAVACRI*ASQKDGFHSCV
Trigger: AACACAAGAATGGAAACCATCTTTTTGTGAGGCCAAGATTCTACATGCCACAGCTCCAAACCCAGAATACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000101269.2
CDS CCA 72 bp AACATTTTTCTGGACAGTATTCTGGGTTTGGAGCTGTaGCATGTAGAATCTTGGCCTCACAAAAAGATGGTT +
Preference number: 6 (lower is better)
Translates to: NIFLDSILGLEL*HVESWPHKKMV
Trigger: AACCATCTTTTTGTGAGGCCAAGATTCTACATGCCACAGCTCCAAACCCAGAATACTGTCCAGAAAAATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000101269.2
CDS CAA 72 bp ATCATTTTGAGTCATCTCTGCTTCAGGTTGGCTGTTTaGTACTGTCTGGAAATCCATATCCTCCTGAGAACT +
Preference number: 6 (lower is better)
Translates to: IILSHLCFRLAV*YCLEIHILLRT
Trigger: AGTTCTCAGGAGGATATGGATTTCCAGACAGTACAAAACAGCCAACCTGAAGCAGAGATGACTCAAAATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101269.2
CDS CAA 90 bp GTGATCAAGGATGGCTACATATTTTTGTTTTACAGATGCATTATGTaGGTGACATTCTGCCTGAGAGAAATTTCTGCTGCACAGCAGGTG +
Preference number: 6 (lower is better)
Translates to: VIKDGYIFLFYRCIM*VTFCLREISAAQQV
Trigger: CACCTGCTGTGCAGCAGAAATTTCTCTCAGGCAGAATGTCACCAACATAATGCATCTGTAAAACAAAAATATGTAGCCATCCTTGATCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000101269.2
CDS CAA 90 bp TTTTCTGGACAGTATTCTGGGTTTGGAGCTGTGGCATGTAGAATCTaGGCCTCACAAAAAGATGGTTTCCATTCTTGTGTTGATATAACT +
Preference number: 6 (lower is better)
Translates to: FSGQYSGFGAVACRI*ASQKDGFHSCVDIT
Trigger: AGTTATATCAACACAAGAATGGAAACCATCTTTTTGTGAGGCCAAGATTCTACATGCCACAGCTCCAAACCCAGAATACTGTCCAGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000101269.2
CDS CAA 72 bp GTATACTCTCAAAGGCCTTCCAAAGACTATGTTCCTTaGGAGATTCATGATATTTTGGTGATCAAGGATGGC +
Preference number: 6 (lower is better)
Translates to: VYSQRPSKDYVP*EIHDILVIKDG
Trigger: GCCATCCTTGATCACCAAAATATCATGAATCTCCAAAGGAACATAGTCTTTGGAAGGCCTTTGAGAGTATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101269.2
CDS GCA 72 bp TTTTTGTTTTACAGATGCATTATGTTGGTGACATTCTaGCTGAGAGAAATTTCTGCTGCACAGCAGGTGAAT +
Preference number: 6 (lower is better)
Translates to: FLFYRCIMLVTF*LREISAAQQVN
Trigger: ATTCACCTGCTGTGCAGCAGAAATTTCTCTCAGGCAGAATGTCACCAACATAATGCATCTGTAAAACAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000101269.2
CDS CAA 72 bp ATGTTTAAAAACATTTTTCTGGACAGTATTCTGGGTTaGGAGCTGTGGCATGTAGAATCTTGGCCTCACAAA +
Preference number: 6 (lower is better)
Translates to: MFKNIFLDSILG*ELWHVESWPHK
Trigger: TTTGTGAGGCCAAGATTCTACATGCCACAGCTCCAAACCCAGAATACTGTCCAGAAAAATGTTTTTAAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000101269.2
CDS CAA 72 bp GATGGCTACATATTTTTGTTTTACAGATGCATTATGTaGGTGACATTCTGCCTGAGAGAAATTTCTGCTGCA +
Preference number: 6 (lower is better)
Translates to: DGYIFLFYRCIM*VTFCLREISAA
Trigger: TGCAGCAGAAATTTCTCTCAGGCAGAATGTCACCAACATAATGCATCTGTAAAACAAAAATATGTAGCCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000101269.2
CDS CAA 90 bp CAAAGGCCTTCCAAAGACTATGTTCCTTTGGAGATTCATGATATTTaGGTGATCAAGGATGGCTACATATTTTTGTTTTACAGATGCATT +
Preference number: 6 (lower is better)
Translates to: QRPSKDYVPLEIHDI*VIKDGYIFLFYRCI
Trigger: AATGCATCTGTAAAACAAAAATATGTAGCCATCCTTGATCACCAAAATATCATGAATCTCCAAAGGAACATAGTCTTTGGAAGGCCTTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000101269.2
CDS CAA 90 bp ATGATAGTAGTATACTCTCAAAGGCCTTCCAAAGACTATGTTCCTTaGGAGATTCATGATATTTTGGTGATCAAGGATGGCTACATATTT +
Preference number: 6 (lower is better)
Translates to: MIVVYSQRPSKDYVP*EIHDILVIKDGYIF
Trigger: AAATATGTAGCCATCCTTGATCACCAAAATATCATGAATCTCCAAAGGAACATAGTCTTTGGAAGGCCTTTGAGAGTATACTACTATCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101269.2
CDS TCA 72 bp AAGGCCTTCCAAAGACTATGTTCCTTTGGAGATTCATaGTATTTTGGTGATCAAGGATGGCTACATATTTTT +
Preference number: 6 (lower is better)
Translates to: KAFQRLCSFGDS*YFGDQGWLHIF
Trigger: AAAAATATGTAGCCATCCTTGATCACCAAAATATCATGAATCTCCAAAGGAACATAGTCTTTGGAAGGCCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000101269.2
CDS GCA 72 bp GTGATCAAGGATGGCTACATATTTTTGTTTTACAGATaGATTATGTTGGTGACATTCTGCCTGAGAGAAATT +
Preference number: 6 (lower is better)
Translates to: VIKDGYIFLFYR*IMLVTFCLREI
Trigger: AATTTCTCTCAGGCAGAATGTCACCAACATAATGCATCTGTAAAACAAAAATATGTAGCCATCCTTGATCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000101269.2