Pregenerated sensors for CPT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028607Ensembl transcript IDs: ENSMUST00000030345.15, ENSMUST00000106719.8, ENSMUST00000106720.9, ENSMUST00000131644.2
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTaGCTGCTCAAGCACCAGGAACTAGTTTTGTTGACAAGATGGTAC | + |
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Preference number: 1 (lower is better) Translates to: LSLPSVGIFRSHLQH*LLKHQELVLLTRWY Trigger: GTACCATCTTGTCAACAAAACTAGTTCCTGGTGCTTGAGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| 3UTR CAA 90 bp | TCCTTAAGAAAGGGCTTTAGAGCTGCAGTCTCTCATTACCTTCAGTaGGGATCTTCCGCTCACACCTGCAGCACTGGCTGCTCAAGCACC | + |
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Preference number: 2 (lower is better) Translates to: SLRKGFRAAVSHYLQ*GSSAHTCSTGCSST Trigger: GGTGCTTGAGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAGCTCTAAAGCCCTTTCTTAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| 3UTR-3UTR CCA 90 bp | CTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGCTCAAGCACCAGGGTTCATGAGGAAGAATaGAGGCTTTTCATCGACCAA | + |
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Preference number: 2 (lower is better) Translates to: LQLGSSAHTCSTGCSSTRVHEEE*RLFIDQ Trigger: TTGGTCGATGAAAAGCCTCCATTCTTCCTCATGAAC...CCTGGTGCTTGAGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| 3UTR CCA 72 bp | AGGGCTTTAGAGCTGCAGTCTCTCATTACCTTCAGTTaGGATCTTCCGCTCACACCTGCAGCACTGGCTGCT | + |
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Preference number: 3 (lower is better) Translates to: RALELQSLITFS*DLPLTPAALAA Trigger: AGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAGCTCTAAAGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| 3UTR CCA 72 bp | CCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTaGCTGCTCAAGCACCAGGAACTAGTTTTGTTGACA | + |
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Preference number: 3 (lower is better) Translates to: PSVGIFRSHLQH*LLKHQELVLLT Trigger: TGTCAACAAAACTAGTTCCTGGTGCTTGAGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| 3UTR-3UTR CAA 90 bp | TGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCAGGAACTAGTTTTGTaGACAAGATGGTACCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: CSLSLPSVGIFRSHLQHWQELVL*TRWYLP Trigger: TGGAAGGTACCATCTTGTCAACAAAACTAGTTCCTG...CCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| 3UTR-3UTR CAA 90 bp | GAAAGGGCTTTAGAGCTGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCCAGGAACTAGTTTTGTaGACAAGATGGTACCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: ERALELQSLITFSWDLPLQELVL*TRWYLP Trigger: TGGAAGGTACCATCTTGTCAACAAAACTAGTTCCTG...GAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAGCTCTAAAGCCCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| 3UTR TCA 72 bp | CTAGTTTTGTTGACAAGATGGTACCTTCCAGCTACATaGACACCAATGTTCATGAGGAAGAATGGAGGCTTT | + |
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Preference number: 3 (lower is better) Translates to: LVLLTRWYLPAT*TPMFMRKNGGF Trigger: AAAGCCTCCATTCTTCCTCATGAACATTGGTGTTCATGTAGCTGGAAGGTACCATCTTGTCAACAAAACTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS-3UTR CCA 90 bp | TTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGCTCAAGCACCAGGATCGGTGGCGGCCGGCTaGCTCTGGGGAGCAATGGCA | + |
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Preference number: 4 (lower is better) Translates to: FSWDLPLTPAALAAQAPGSVAAG*LWGAMA Trigger: TGCCATTGCTCCCCAGAGCCAGCCGGCCGCCACCGA...TCCTGGTGCTTGAGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR GCA 90 bp | TACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGCTCAAGCACCGGTACGATGCTGTGCTaGAGATACTCGGCGGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: YLQLGSSAHTCSTGCSSTGTMLC*RYSAGP Trigger: GGGGCCCGCCGAGTATCTGCAGCACAGCATCGTACC...GGTGCTTGAGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS-3UTR GCA 90 bp | TTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGCTCAAGCACCAGGAGGTACGATGCTGTGCTaGAGATACTCGGCGGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: FSWDLPLTPAALAAQAPGGTMLC*RYSAGP Trigger: GGGGCCCGCCGAGTATCTGCAGCACAGCATCGTACC...TCCTGGTGCTTGAGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS-3UTR GCA 90 bp | CTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGCTCAAGCACCAGGAGCTCGCCCACACTGTaGTTGGAGGGCTCCCTGACA | + |
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Preference number: 4 (lower is better) Translates to: LQLGSSAHTCSTGCSSTRSSPTL*LEGSLT Trigger: TGTCAGGGAGCCCTCCAAGCACAGTGTGGGCGAGCT...CCTGGTGCTTGAGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR GCA 90 bp | TTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGCTCAAGCACCAGGAGCCCTGGCCCATCGCTaGTTCTTTGGTCAGCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: FSWDLPLTPAALAAQAPGALAHR*FFGQLA Trigger: GGCCAGCTGACCAAAGAAGCAGCGATGGGCCAGGGC...TCCTGGTGCTTGAGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR GCA 90 bp | TCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGCTCAAGCACCAGGAAGCCACCGAGGCTCACTaGTGGGCTGCTCAGAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: SVGIFRSHLQHWLLKHQEATEAH*WAAQSA Trigger: AGCACTCTGAGCAGCCCAGCAGTGAGCCTCGGTGGC...TTCCTGGTGCTTGAGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS-3UTR GCA 90 bp | TCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGCTCAAGCACCAGGAACAAACCAGCGGTTCGTaGCGTCACCGTGCAGCATGG | + |
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Preference number: 4 (lower is better) Translates to: SVGIFRSHLQHWLLKHQEQTSGS*RHRAAW Trigger: CCATGCTGCACGGTGACGGCACGAACCGCTGGTTTG...TTCCTGGTGCTTGAGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR GCA 90 bp | CTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGCTCGCCACCGAGGCTCACTaGTGGGCTGCTCAGAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: LSLPSVGIFRSHLQHWLLATEAH*WAAQSA Trigger: AGCACTCTGAGCAGCCCAGCAGTGAGCCTCGGTGGC...GAGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS-3UTR CCA 90 bp | GAAAGGGCTTTAGAGCTGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCGCGGCCGGCTGGCTCTaGGGAGCAATGGCAGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: ERALELQSLITFSWDLPLAAGWL*GAMAGV Trigger: GACCCCTGCCATTGCTCCCCAGAGCCAGCCGGCCGC...GAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAGCTCTAAAGCCCTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR TCA 90 bp | CTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGCTCGCTTGGAGGGCTCCCTaGCAAATGCCTCGGAGCATC | + |
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Preference number: 4 (lower is better) Translates to: LSLPSVGIFRSHLQHWLLAWRAP*QMPRSI Trigger: GATGCTCCGAGGCATTTGTCAGGGAGCCCTCCAAGC...GAGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR CCA 90 bp | GCTGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTACCGAGGCTCACTGCTaGGCTGCTCAGAGTGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: AAVSHYLQLGSSAHTCSTTEAHC*AAQSAG Trigger: ACCAGCACTCTGAGCAGCCCAGCAGTGAGCCTCGGT...AGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS-3UTR CCA 90 bp | CTGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGACCGAGGCTCACTGCTaGGCTGCTCAGAGTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LQSLITFSWDLPLTPAALTEAHC*AAQSAG Trigger: ACCAGCACTCTGAGCAGCCCAGCAGTGAGCCTCGGT...CAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS-3UTR TCA 90 bp | CTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGCTCAAGCACCAGGTTATTCTGTTTATCCTaGGCGAGCAGGTGCGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: LQLGSSAHTCSTGCSSTRLFCLS*ASRCAC Trigger: GCATGCGCACCTGCTCGCTCAGGATAAACAGAATAA...CCTGGTGCTTGAGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS-3UTR GCA 90 bp | ACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGCTCAAGCACCACTTCTGTCTGAGCTCTaGCCAGACATCTCGGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: TFSWDLPLTPAALAAQAPLLSEL*PDISVL Trigger: GAGAACCGAGATGTCTGGGCAGAGCTCAGACAGAAG...TGGTGCTTGAGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR CCA 90 bp | TCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGCTCAAGCACCAGGAATTGGTCAGCTGGCCATaGTATTTGGAGCACTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SVGIFRSHLQHWLLKHQELVSWP*YLEHSA Trigger: GGCTGAGTGCTCCAAATACCATGGCCAGCTGACCAA...TTCCTGGTGCTTGAGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR TCA 90 bp | ACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGCTCAAGCACCAGAGGCTTCTGTGCACTaGGGTATCTCTTCATGGTGT | + |
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Preference number: 4 (lower is better) Translates to: TFSWDLPLTPAALAAQAPEASVH*GISSWC Trigger: ACACCATGAAGAGATACCTCAGTGCACAGAAGCCTC...TGGTGCTTGAGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS-3UTR TCA 90 bp | GCTGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTCCAGGGGATATGCATTaGCCAGGTAGGCTCCATACC | + |
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Preference number: 4 (lower is better) Translates to: AAVSHYLQLGSSAHTCSTPGDMH*PGRLHT Trigger: GGTATGGAGCCTACCTGGTCAATGCATATCCCCTGG...AGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR TCA 90 bp | AGAGCTGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCGCAATGGCAGGGGTCTaGGTGCTGTCTCTGAACACT | + |
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Preference number: 4 (lower is better) Translates to: RAAVSHYLQLGSSAHTCSAMAGV*VLSLNT Trigger: AGTGTTCAGAGACAGCACTCAGACCCCTGCCATTGC...GCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR TCA 90 bp | TCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGCTCAAGCACCAGGAAGAATGGCGTCAATGGTaGGGGTTTTCATGGTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: SVGIFRSHLQHWLLKHQEEWRQW*GFSWWH Trigger: ATGCCACCATGAAAACCCTCACCATTGACGCCATTC...TTCCTGGTGCTTGAGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR TCA 90 bp | CGCTCACACCTGCAGCACTGGCTGCTCAAGCACCAGGAACTAGTTTTGTTGACATCGGGCATTGCGTCCTaGGTAGGAGGAGACATTGCA | + |
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Preference number: 4 (lower is better) Translates to: RSHLQHWLLKHQELVLLTSGIAS*VGGDIA Trigger: TGCAATGTCTCCTCCTACTCAGGACGCAATGCCCGA...TGTCAACAAAACTAGTTCCTGGTGCTTGAGCAGCCAGTGCTGCAGGTGTGAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS-3UTR TCA 90 bp | GCTGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGTCAAAGCCCTGGCCTaGGATGTAGCTGGTGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: AAVSHYLQLGSSAHTCSTVKALA*DVAGVL Trigger: AAGCACACCAGCTACATCTCAGGCCAGGGCTTTGAC...AGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106720.9 |
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| CDS-3UTR CCA 90 bp | GCTGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTCCTGGTAGTGCATGGTaGGTACGATGCTGTGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: AAVSHYLQLGSSAHTCSTPGSAW*VRCCAA Trigger: TGCAGCACAGCATCGTACCCACCATGCACTACCAGG...AGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS-3UTR CCA 90 bp | CTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGCTCAAGCACCAGGTCTGTCTTCCTGAACTaGCTGTCATTCAAGAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: LQLGSSAHTCSTGCSSTRSVFLN*LSFKRG Trigger: GCCTCTCTTGAATGACAGCCAGTTCAGGAAGACAGA...CCTGGTGCTTGAGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| 3UTR CAA 72 bp | AAGGGCTTTAGAGCTGCAGTCTCTCATTACCTTCAGTaGGGATCTTCCGCTCACACCTGCAGCACTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: KGFRAAVSHYLQ*GSSAHTCSTGC Trigger: GCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAGCTCTAAAGCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS-3UTR TCA 90 bp | CTGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGATCAAACCAGGGGCCTaGGATGTAGCTGGTGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: LQSLITFSWDLPLTPAALIKPGA*DVAGVL Trigger: AAGCACACCAGCTACATCTCAGGCCCCTGGTTTGAT...CAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR TCA 90 bp | AGAGCTGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCAGTTGGTGGCCCTGGTaGGCTGGTCATTATACTCAG | + |
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Preference number: 4 (lower is better) Translates to: RAAVSHYLQLGSSAHTCSSWWPW*AGHYTQ Trigger: CTGAGTATAATGACCAGCTCACCAGGGCCACCAACT...GCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR GCA 90 bp | CGCTCACACCTGCAGCACTGGCTGCTCAAGCACCAGGAACTAGTTTTGTTGACAACTCGGGCACAGGGCTaGTGTCTGAGAGAATGTACT | + |
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Preference number: 4 (lower is better) Translates to: RSHLQHWLLKHQELVLLTTRAQG*CLRECT Trigger: AGTACATTCTCTCAGACAGCAGCCCTGTGCCCGAGT...TGTCAACAAAACTAGTTCCTGGTGCTTGAGCAGCCAGTGCTGCAGGTGTGAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR GCA 90 bp | TTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGCTCAAGCACCAGGAAGTAGGAGGAGACATTaGAGCCTATCCAGTCATCGT | + |
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Preference number: 4 (lower is better) Translates to: FSWDLPLTPAALAAQAPGSRRRH*SLSSHR Trigger: ACGATGACTGGATAGGCTGCAATGTCTCCTCCTACT...TCCTGGTGCTTGAGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS-3UTR CCA 90 bp | TACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGCTCAAGCACCGCTGGCCATGGTATTTaGAGCACTCAGCCATCATAT | + |
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Preference number: 4 (lower is better) Translates to: YLQLGSSAHTCSTGCSSTAGHGI*STQPSY Trigger: ATATGATGGCTGAGTGCTCCAAATACCATGGCCAGC...GGTGCTTGAGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR CCA 90 bp | TCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGCTCAAGCACCAGGAAGTGGACAGGATGTTGTaGTTTATCCGCTGGTATGCA | + |
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Preference number: 4 (lower is better) Translates to: SVGIFRSHLQHWLLKHQEVDRML*FIRWYA Trigger: TGCATACCAGCGGATAAACCACAACATCCTGTCCAC...TTCCTGGTGCTTGAGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS-3UTR TCA 90 bp | GCTGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGAGGCTTCTGTGCACTaGGGTATCTCTTCATGGTGT | + |
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Preference number: 4 (lower is better) Translates to: AAVSHYLQLGSSAHTCSTEASVH*GISSWC Trigger: ACACCATGAAGAGATACCTCAGTGCACAGAAGCCTC...AGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS-3UTR TCA 90 bp | ACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGCTCAAGCACCAACACTTCTGTCTTCCTaGACTGGCTGTCATTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: TFSWDLPLTPAALAAQAPTLLSS*TGCHSR Trigger: TCTTGAATGACAGCCAGTTCAGGAAGACAGAAGTGT...TGGTGCTTGAGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS-3UTR TCA 90 bp | CTGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGAATCAACTTCTGTCTaGGCTCTGCCCAGACATCTC | + |
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Preference number: 4 (lower is better) Translates to: LQSLITFSWDLPLTPAALESTSV*ALPRHL Trigger: GAGATGTCTGGGCAGAGCTCAGACAGAAGTTGATTC...CAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR TCA 90 bp | GAAAGGGCTTTAGAGCTGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCTCGGGCATTGCGTCCTaGGTAGGAGGAGACATTGCA | + |
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Preference number: 4 (lower is better) Translates to: ERALELQSLITFSWDLPLSGIAS*VGGDIA Trigger: TGCAATGTCTCCTCCTACTCAGGACGCAATGCCCGA...GAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAGCTCTAAAGCCCTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS-3UTR GCA 90 bp | TGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCATATCCAGGGGATATaGATTGACCAGGTAGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: CSLSLPSVGIFRSHLQHWHIQGI*IDQVGS Trigger: GGAGCCTACCTGGTCAATGCATATCCCCTGGATATG...CCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR GCA 90 bp | GGCTTTAGAGCTGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCGGGCTCCCTGACAAATaGCTCGGAGCATCTCTTAGT | + |
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Preference number: 4 (lower is better) Translates to: GFRAAVSHYLQLGSSAHTGLPDK*LGASLS Trigger: ACTAAGAGATGCTCCGAGGCATTTGTCAGGGAGCCC...GGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAGCTCTAAAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR GCA 90 bp | GCTGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGAACAGCATACGCAATaGCAAAGCCATCAGGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: AAVSHYLQLGSSAHTCSTEQHTQ*QSHQGP Trigger: TGGTCCCTGATGGCTTTGGCATTGCGTATGCTGTTC...AGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
||
| CDS-3UTR GCA 90 bp | AGAGCTGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCGAACAGCATACGCAATaGCAAAGCCATCAGGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: RAAVSHYLQLGSSAHTCSEQHTQ*QSHQGP Trigger: TGGTCCCTGATGGCTTTGGCATTGCGTATGCTGTTC...GCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
||
| CDS-3UTR CCA 90 bp | CAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGTGGCCCTGGTGAGCTaGTCATTATACTCAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: QSLITFSWDLPLTPAALAVALVS*SLYSDF Trigger: GAAGTCTGAGTATAATGACCAGCTCACCAGGGCCAC...AGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
||
| CDS-3UTR CCA 90 bp | CTGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGCTGGCAGGGTTCAAGTaGAACACTTCTGGCTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LQSLITFSWDLPLTPAALLAGFK*NTSGSR Trigger: TCTAGAGCCAGAAGTGTTCCACTTGAACCCTGCCAG...CAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
||
| CDS-3UTR CCA 90 bp | CTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGCTCCATCTCGGTTCTCACTaGTCAAATAAGCCAGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSLPSVGIFRSHLQHWLLHLGSH*SNKPGE Trigger: TTCCCCTGGCTTATTTGACCAGTGAGAACCGAGATG...GAGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
||
| CDS-3UTR CCA 90 bp | GCTGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGCTTCTTTGGTCAGCTaGCCATGGTATTTGGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AAVSHYLQLGSSAHTCSTASLVS*PWYLEH Trigger: GTGCTCCAAATACCATGGCCAGCTGACCAAAGAAGC...AGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
||
| CDS-3UTR TCA 90 bp | CAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTATGTGCCTGGATTTCTaGGGGATTCACAATGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QSLITFSWDLPLTPAALAMCLDF*GIHNVP Trigger: GGGAACATTGTGAATCCCTCAGAAATCCAGGCACAT...AGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
||
| CDS-3UTR GCA 90 bp | CTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGCTCCAAGAGAGGCTTCTGTaGACTGAGGTATCTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LSLPSVGIFRSHLQHWLLQERLL*TEVSLH Trigger: ATGAAGAGATACCTCAGTGCACAGAAGCCTCTCTTG...GAGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
||
| CDS-3UTR GCA 90 bp | ACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGCTCAAGCACCATCAGGGTTTCCTCATTaGCACCATGAATCAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TFSWDLPLTPAALAAQAPSGFPH*HHESTS Trigger: AGAAGTTGATTCATGGTGGCAATGAGGAAACCCTGA...TGGTGCTTGAGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR GCA 90 bp | CTGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGTTAAAACTGAGCTTCTaGACAGACACGGAGGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LQSLITFSWDLPLTPAALLKLSF*TDTEES Trigger: CGACTCCTCCGTGTCTGTGCAGAAGCTCAGTTTTAA...CAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
||
| CDS-3UTR GCA 90 bp | AGAGCTGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCAGTAGGAGGAGACATTaGAGCCTATCCAGTCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: RAAVSHYLQLGSSAHTCSSRRRH*SLSSHR Trigger: ACGATGACTGGATAGGCTGCAATGTCTCCTCCTACT...GCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
||
| CDS-3UTR CCA 90 bp | GAAAGGGCTTTAGAGCTGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCTGTCCTGGTAGTGCATaGTGGGTACGATGCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ERALELQSLITFSWDLPLCPGSA*WVRCCA Trigger: AGCACAGCATCGTACCCACCATGCACTACCAGGACA...GAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAGCTCTAAAGCCCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
||
| CDS-3UTR CCA 90 bp | TACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGCTCAAGCACCGGCCTGAGATGTAGCTaGTGTGCTTATTCTGTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: YLQLGSSAHTCSTGCSSTGLRCS*CAYSVY Trigger: ATAAACAGAATAAGCACACCAGCTACATCTCAGGCC...GGTGCTTGAGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS-3UTR CCA 90 bp | TCCAGCTACATGAACACCAATGTTCATGAGGAAGAATGGAGGCTTTTCATCGACATCTGGAAGGCCAGCTaGGCCACTGCATCAGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSYMNTNVHEEEWRLFIDIWKAS*ATASGL Trigger: GAGCCCTGATGCAGTGGCCCAGCTGGCCTTCCAGAT...GTCGATGAAAAGCCTCCATTCTTCCTCATGAACATTGGTGTTCATGTAGCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
||
| CDS-3UTR CCA 90 bp | GCTGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGTGGACAGGATGTTGTaGTTTATCCGCTGGTATGCA | + |
|
Preference number: 4 (lower is better) Translates to: AAVSHYLQLGSSAHTCSTVDRML*FIRWYA Trigger: TGCATACCAGCGGATAAACCACAACATCCTGTCCAC...AGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS-3UTR CCA 90 bp | AGAGCTGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCTGCTCAGAGTGCTGGTaGACAGGATGTTGTGGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: RAAVSHYLQLGSSAHTCSCSECW*TGCCGL Trigger: TAAACCACAACATCCTGTCCACCAGCACTCTGAGCA...GCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
||
| CDS-3UTR CCA 90 bp | GCTGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTTGCTCAGAGTGCTGGTaGACAGGATGTTGTGGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: AAVSHYLQLGSSAHTCSTCSECW*TGCCGL Trigger: TAAACCACAACATCCTGTCCACCAGCACTCTGAGCA...AGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS-3UTR TCA 90 bp | CAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTACACTTCTGTCTTCCTaGACTGGCTGTCATTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QSLITFSWDLPLTPAALATLLSS*TGCHSR Trigger: TCTTGAATGACAGCCAGTTCAGGAAGACAGAAGTGT...AGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS-3UTR TCA 90 bp | TACATGAACACCAATGTTCATGAGGAAGAATGGAGGCTTTTCATCGACCAAGAACTGTGCGGCCGTGTTTaGAGGCTGCAGTGCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YMNTNVHEEEWRLFIDQELCGRV*RLQCCR Trigger: CCTGCAGCACTGCAGCCTTCAAACACGGCCGCACAG...TTCTTGGTCGATGAAAAGCCTCCATTCTTCCTCATGAACATTGGTGTTCATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR GCA 90 bp | CTGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGCAAGAGAGGCTTCTGTaGACTGAGGTATCTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LQSLITFSWDLPLTPAALQERLL*TEVSLH Trigger: ATGAAGAGATACCTCAGTGCACAGAAGCCTCTCTTG...CAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
||
| CDS-3UTR GCA 90 bp | AGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGCTTCAGAAACCGCACTaGAGAAACAGTCAAGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLSLPSVGIFRSHLQHWLLQKPH*RNSQVG Trigger: ACCAACTTGACTGTTTCTGCAGTGCGGTTTCTGAAG...CAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR CCA 90 bp | GAAAGGGCTTTAGAGCTGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCCCATCGCTGCTTCTTTaGTCAGCTGGCCATGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: ERALELQSLITFSWDLPLPSLLL*SAGHGI Trigger: AATACCATGGCCAGCTGACCAAAGAAGCAGCGATGG...GAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAGCTCTAAAGCCCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR TCA 90 bp | TGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGACAATGTTCCCATCTTaGTCGAGGACATCAAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: CSLSLPSVGIFRSHLQHWTMFPS*SRTSKT Trigger: TGTCTTTGATGTCCTCGATCAAGATGGGAACATTGT...CCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR GCA 90 bp | CGCTCACACCTGCAGCACTGGCTGCTCAAGCACCAGGAACTAGTTTTGTTGACACGGGTCCGGATTGAATaGCATGAATGGATTAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RSHLQHWLLKHQELVLLTRVRIE*HEWIKV Trigger: AACTTTAATCCATTCATGGCATTCAATCCGGACCCG...TGTCAACAAAACTAGTTCCTGGTGCTTGAGCAGCCAGTGCTGCAGGTGTGAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR CCA 90 bp | GTACCTTCCAGCTACATGAACACCAATGTTCATGAGGAAGAATGGAGGCTTTTCCCTGGTAGTGCATGGTaGGTACGATGCTGTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VPSSYMNTNVHEEEWRLFPGSAW*VRCCAA Trigger: TGCAGCACAGCATCGTACCCACCATGCACTACCAGG...GAAAAGCCTCCATTCTTCCTCATGAACATTGGTGTTCATGTAGCTGGAAGGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS-3UTR CCA 90 bp | GGCTTTAGAGCTGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTCTTCCAAGCACTTCTaGACACAGTGGAGAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: GFRAAVSHYLQLGSSAHTSSKHF*TQWRNS Trigger: AGAGTTTCTCCACTGTGTCCAGAAGTGCTTGGAAGA...GGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAGCTCTAAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS-3UTR GCA 90 bp | AGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGTCTTCAAGAATTCCTTaGCACCTCTCTGAAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLSLPSVGIFRSHLQHWLSSRIP*HLSETE Trigger: TTCAGTTTCAGAGAGGTGGCAAGGAATTCTTGAAGA...CAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR CCA 90 bp | TCCAGCTACATGAACACCAATGTTCATGAGGAAGAATGGAGGCTTTTCATCGACTGTCCTGGTAGTGCATaGTGGGTACGATGCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSYMNTNVHEEEWRLFIDCPGSA*WVRCCA Trigger: AGCACAGCATCGTACCCACCATGCACTACCAGGACA...GTCGATGAAAAGCCTCCATTCTTCCTCATGAACATTGGTGTTCATGTAGCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS-3UTR TCA 90 bp | AGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGGTATACGAGTTGAATTaGAAAGCCGAAAATATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLSLPSVGIFRSHLQHWLVYELN*KAENIG Trigger: CCCAATATTTTCGGCTTTTCAATTCAACTCGTATAC...CAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
||
| CDS-3UTR TCA 90 bp | TCCAGCTACATGAACACCAATGTTCATGAGGAAGAATGGAGGCTTTTCATCGACGTGCAGCATGGTGTGTaGCAAGTGAACAAGATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSYMNTNVHEEEWRLFIDVQHGV*QVNKIL Trigger: AAGGATCTTGTTCACTTGTCACACACCATGCTGCAC...GTCGATGAAAAGCCTCCATTCTTCCTCATGAACATTGGTGTTCATGTAGCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR CCA 90 bp | GTACCTTCCAGCTACATGAACACCAATGTTCATGAGGAAGAATGGAGGCTTTTCTCTTCCAAGCACTTCTaGACACAGTGGAGAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPSSYMNTNVHEEEWRLFSSKHF*TQWRNS Trigger: AGAGTTTCTCCACTGTGTCCAGAAGTGCTTGGAAGA...GAAAAGCCTCCATTCTTCCTCATGAACATTGGTGTTCATGTAGCTGGAAGGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
||
| CDS-3UTR TCA 90 bp | TACATGAACACCAATGTTCATGAGGAAGAATGGAGGCTTTTCATCGACCAAGAATCCTCATTGCCACCATaGATCAACTTCTGTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YMNTNVHEEEWRLFIDQESSLPP*INFCLS Trigger: GCTCAGACAGAAGTTGATTCATGGTGGCAATGAGGA...TTCTTGGTCGATGAAAAGCCTCCATTCTTCCTCATGAACATTGGTGTTCATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
||
| CDS-3UTR CCA 90 bp | TACATGAACACCAATGTTCATGAGGAAGAATGGAGGCTTTTCATCGACCAAGAACATCTGTGTCACTTCTaGCAGGGTTCAAGTGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: YMNTNVHEEEWRLFIDQEHLCHF*QGSSGT Trigger: TGTTCCACTTGAACCCTGCCAGAAGTGACACAGATG...TTCTTGGTCGATGAAAAGCCTCCATTCTTCCTCATGAACATTGGTGTTCATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR CCA 90 bp | TACATGAACACCAATGTTCATGAGGAAGAATGGAGGCTTTTCATCGACCAAGAAGGCCTGAGATGTAGCTaGTGTGCTTATTCTGTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: YMNTNVHEEEWRLFIDQEGLRCS*CAYSVY Trigger: ATAAACAGAATAAGCACACCAGCTACATCTCAGGCC...TTCTTGGTCGATGAAAAGCCTCCATTCTTCCTCATGAACATTGGTGTTCATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS GCA 90 bp | CTGTCTTCCTGGGCAGGCTGTCCTGGTAGTGCATGGTGGGTACGATaGTGTGCTGCAGATACTCGGCGGGCCCCGAGACAGCACTTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSSWAGCPGSAWWVR*CAADTRRAPRQHLR Trigger: CCTTAAGTGCTGTCTCGGGGCCCGCCGAGTATCTGCAGCACAGCATCGTACCCACCATGCACTACCAGGACAGCCTGCCCAGGAAGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131644.2 |
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| CDS CCA 90 bp | ACAACACTTCTGTCTTCCTGGGCAGGCTGTCCTGGTAGTGCATGGTaGGTACGATGCTGTGCTGCAGATACTCGGCGGGCCCCGAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: TTLLSSWAGCPGSAW*VRCCAADTRRAPRQ Trigger: CTGTCTCGGGGCCCGCCGAGTATCTGCAGCACAGCATCGTACCCACCATGCACTACCAGGACAGCCTGCCCAGGAAGACAGAAGTGTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131644.2 |
||
| CDS GCA 90 bp | GCTCAGAGTGCTGGTGGACAGGATGTTGTGGTTTATCCGCTGGTATaGAGGGTCCTGATAGAGCTCAGGCAGGGTGACCCCTCTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AQSAGGQDVVVYPLV*RVLIELRQGDPSGC Trigger: GCAGCCAGAGGGGTCACCCTGCCTGAGCTCTATCAGGACCCTGCATACCAGCGGATAAACCACAACATCCTGTCCACCAGCACTCTGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS CCA 90 bp | TACACAACACTTCTGTCTTCCTGGGCAGGCTGTCCTGGTAGTGCATaGTGGGTACGATGCTGTGCTGCAGATACTCGGCGGGCCCCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: YTTLLSSWAGCPGSA*WVRCCAADTRRAPR Trigger: TCTCGGGGCCCGCCGAGTATCTGCAGCACAGCATCGTACCCACCATGCACTACCAGGACAGCCTGCCCAGGAAGACAGAAGTGTTGTGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131644.2 |
||
| CDS-3UTR CAA 90 bp | TTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGCTCAAGCACCAGGAGCAGAAACAGTCAAGTaGGTGGCCCTGGTGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FSWDLPLTPAALAAQAPGAETVK*VALVSW Trigger: CCAGCTCACCAGGGCCACCAACTTGACTGTTTCTGC...TCCTGGTGCTTGAGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
||
| CDS TCA 90 bp | GGTTTATCCGCTGGTATGCAGGGTCCTGATAGAGCTCAGGCAGGGTaGCCCCTCTGGCTGCTGCCAGATACCGTAGAGCAAACAAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GLSAGMQGPDRAQAG*PLWLLPDTVEQTSV Trigger: GACACTTGTTTGCTCTACGGTATCTGGCAGCAGCCAGAGGGGTCACCCTGCCTGAGCTCTATCAGGACCCTGCATACCAGCGGATAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
||
| CDS TCA 90 bp | TTGGTCAGCTGGCCATGGTATTTGGAGCACTCAGCCATCATATGCTaGAGCTCGCCCACACTGTGCTTGGAGGGCTCCCTGACAAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: LVSWPWYLEHSAIIC*SSPTLCLEGSLTNA Trigger: GGCATTTGTCAGGGAGCCCTCCAAGCACAGTGTGGGCGAGCTTCAGCATATGATGGCTGAGTGCTCCAAATACCATGGCCAGCTGACCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
||
| CDS GCA 90 bp | GATGGAAGCTGGGCGAATAGTCTCTGTGCGGCCGTGTTTGAAGGCTaGAGTGCTGCAGGATTCATAGGTAGCCACTGTCTGGCCATACTG | + |
|
Preference number: 5 (lower is better) Translates to: DGSWANSLCAAVFEG*SAAGFIGSHCLAIL Trigger: CAGTATGGCCAGACAGTGGCTACCTATGAATCCTGCAGCACTGCAGCCTTCAAACACGGCCGCACAGAGACTATTCGCCCAGCTTCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
||
| CDS GCA 90 bp | AGGAGACATTGCAGCCTATCCAGTCATCGTGAACAGCATACGCAATaGCAAAGCCATCAGGGACCACAGGGGCAAAGCCACCGAGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RRHCSLSSHREQHTQ*QSHQGPQGQSHRGS Trigger: TGAGCCTCGGTGGCTTTGCCCCTGTGGTCCCTGATGGCTTTGGCATTGCGTATGCTGTTCACGATGACTGGATAGGCTGCAATGTCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
||
| CDS TCA 90 bp | AACCAGCGGTTCGTGCCGTCACCGTGCAGCATGGTGTGTGACAAGTaGACAAGATCCTTCATCGGGAAGTCATCTAAGCAGAGGCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NQRFVPSPCSMVCDK*TRSFIGKSSKQRQK Trigger: CTTCTGCCTCTGCTTAGATGACTTCCCGATGAAGGATCTTGTTCACTTGTCACACACCATGCTGCACGGTGACGGCACGAACCGCTGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
||
| CDS TCA 90 bp | CAAGCACTTCTGGACACAGTGGAGAAACTCTCGGGCATTGCGTCCTaGGTAGGAGGAGACATTGCAGCCTATCCAGTCATCGTGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: QALLDTVEKLSGIAS*VGGDIAAYPVIVNS Trigger: GCTGTTCACGATGACTGGATAGGCTGCAATGTCTCCTCCTACTCAGGACGCAATGCCCGAGAGTTTCTCCACTGTGTCCAGAAGTGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS GCA 90 bp | ATGCTGAAGCTCGCCCACACTGTGCTTGGAGGGCTCCCTGACAAATaGCTCGGAGCATCTCTTAGTAAAGATGGAAGCTGGGCGAATAGT | + |
|
Preference number: 5 (lower is better) Translates to: MLKLAHTVLGGLPDK*LGASLSKDGSWANS Trigger: ACTATTCGCCCAGCTTCCATCTTTACTAAGAGATGCTCCGAGGCATTTGTCAGGGAGCCCTCCAAGCACAGTGTGGGCGAGCTTCAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
||
| CDS CCA 90 bp | CTCCCTGACAAATGCCTCGGAGCATCTCTTAGTAAAGATGGAAGCTaGGCGAATAGTCTCTGTGCGGCCGTGTTTGAAGGCTGCAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LPDKCLGASLSKDGS*ANSLCAAVFEGCSA Trigger: AGCACTGCAGCCTTCAAACACGGCCGCACAGAGACTATTCGCCCAGCTTCCATCTTTACTAAGAGATGCTCCGAGGCATTTGTCAGGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR CAA 90 bp | ACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGCTCAAGCACCAGCAGCAGTGCCATCTTaGGCTACAATGAGGTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TFSWDLPLTPAALAAQAPAAVPS*ATMRLK Trigger: CTTTAACCTCATTGTAGCCAAAGATGGCACTGCTGC...TGGTGCTTGAGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR CAA 90 bp | GAAAGGGCTTTAGAGCTGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCTCGCCCACACTGTGCTaGGAGGGCTCCCTGACAAAT | + |
|
Preference number: 5 (lower is better) Translates to: ERALELQSLITFSWDLPLSPTLC*EGSLTN Trigger: ATTTGTCAGGGAGCCCTCCAAGCACAGTGTGGGCGA...GAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAGCTCTAAAGCCCTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS GCA 90 bp | AGTGGAGAAACTCTCGGGCATTGCGTCCTGAGTAGGAGGAGACATTaGAGCCTATCCAGTCATCGTGAACAGCATACGCAATGCCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SGETLGHCVLSRRRH*SLSSHREQHTQCQS Trigger: GCTTTGGCATTGCGTATGCTGTTCACGATGACTGGATAGGCTGCAATGTCTCCTCCTACTCAGGACGCAATGCCCGAGAGTTTCTCCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS GCA 90 bp | TGTCTTCCAAGCACTTCTGGACACAGTGGAGAAACTCTCGGGCATTaGGTCCTGAGTAGGAGGAGACATTGCAGCCTATCCAGTCATCGT | + |
|
Preference number: 5 (lower is better) Translates to: CLPSTSGHSGETLGH*VLSRRRHCSLSSHR Trigger: ACGATGACTGGATAGGCTGCAATGTCTCCTCCTACTCAGGACGCAATGCCCGAGAGTTTCTCCACTGTGTCCAGAAGTGCTTGGAAGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS CCA 90 bp | TCCCAATGCCGTTCTCAAAATCCTTACACAACACTTCTGTCTTCCTaGGCAGGCTGTCCTGGTAGTGCATGGTGGGTACGATGCTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SQCRSQNPYTTLLSS*AGCPGSAWWVRCCA Trigger: AGCACAGCATCGTACCCACCATGCACTACCAGGACAGCCTGCCCAGGAAGACAGAAGTGTTGTGTAAGGATTTTGAGAACGGCATTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131644.2 |
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| CDS-3UTR CAA 90 bp | TGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGAGCTGGCCATGGTATTaGGAGCACTCAGCCATCATA | + |
|
Preference number: 5 (lower is better) Translates to: CSLSLPSVGIFRSHLQHWSWPWY*EHSAII Trigger: TATGATGGCTGAGTGCTCCAAATACCATGGCCAGCT...CCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS TCA 90 bp | AAGACAGCAGAGTCCACTTTCCTCAGGGTTTCCTCATTGCCACCATaGATCAACTTCTGTCTGAGCTCTGCCCAGACATCTCGGTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KTAESTFLRVSSLPP*INFCLSSAQTSRFS Trigger: TGAGAACCGAGATGTCTGGGCAGAGCTCAGACAGAAGTTGATTCATGGTGGCAATGAGGAAACCCTGAGGAAAGTGGACTCTGCTGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS CCA 90 bp | AGAAACCGCACTGCAGAAACAGTCAAGTTGGTGGCCCTGGTGAGCTaGTCATTATACTCAGACTTCGGGTCCGGATTGAATGCCATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: RNRTAETVKLVALVS*SLYSDFGSGLNAMN Trigger: ATTCATGGCATTCAATCCGGACCCGAAGTCTGAGTATAATGACCAGCTCACCAGGGCCACCAACTTGACTGTTTCTGCAGTGCGGTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR CAA 90 bp | CGCTCACACCTGCAGCACTGGCTGCTCAAGCACCAGGAACTAGTTTTGTTGACAAAGCGGATGAGTCTTTaGAAGGCATCTGTGTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: RSHLQHWLLKHQELVLLTKRMSL*KASVSL Trigger: AAGTGACACAGATGCCTTCAAAAGACTCATCCGCTT...TGTCAACAAAACTAGTTCCTGGTGCTTGAGCAGCCAGTGCTGCAGGTGTGAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS-3UTR CAA 90 bp | CTGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGAGGAGGTGTCTAGCCTaGGTATCAGTAAAGAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LQSLITFSWDLPLTPAALRRCLA*VSVKSS Trigger: TGAACTCTTTACTGATACCAAGGCTAGACACCTCCT...CAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
||
| CDS TCA 90 bp | CTTTCCTCAGGGTTTCCTCATTGCCACCATGAATCAACTTCTGTCTaGGCTCTGCCCAGACATCTCGGTTCTCACTGGTCAAATAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSSGFPHCHHESTSV*ALPRHLGSHWSNKP Trigger: TGGCTTATTTGACCAGTGAGAACCGAGATGTCTGGGCAGAGCTCAGACAGAAGTTGATTCATGGTGGCAATGAGGAAACCCTGAGGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
||
| CDS-3UTR CAA 90 bp | TACCTTCAGTTGGGATCTTCCGCTCACACCTGCAGCACTGGCTGCTCAAGCACCGGTATACGAGTTGAATaGAAAAGCCGAAAATATTGG | + |
|
Preference number: 5 (lower is better) Translates to: YLQLGSSAHTCSTGCSSTGIRVE*KSRKYW Trigger: CCAATATTTTCGGCTTTTCAATTCAACTCGTATACC...GGTGCTTGAGCAGCCAGTGCTGCAGGTGTGAGCGGAAGATCCCAACTGAAGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
||
| CDS-3UTR CAA 90 bp | GGCTTTAGAGCTGCAGTCTCTCATTACCTTCAGTTGGGATCTTCCGCTCACACCCACAATGTTCCCATCTaGATCGAGGACATCAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GFRAAVSHYLQLGSSAHTHNVPI*IEDIKD Trigger: GTCTTTGATGTCCTCGATCAAGATGGGAACATTGTG...GGTGTGAGCGGAAGATCCCAACTGAAGGTAATGAGAGACTGCAGCTCTAAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS GCA 90 bp | CACTTCTGTCTTCCTGAACTGGCTGTCATTCAAGAGAGGCTTCTGTaGACTGAGGTATCTCTTCATGGTGTCTTCAAGTTTAGGGATAGG | + |
|
Preference number: 5 (lower is better) Translates to: HFCLPELAVIQERLL*TEVSLHGVFKFRDR Trigger: CCTATCCCTAAACTTGAAGACACCATGAAGAGATACCTCAGTGCACAGAAGCCTCTCTTGAATGACAGCCAGTTCAGGAAGACAGAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030345.15 ENSMUST00000106719.8 ENSMUST00000106720.9 |
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| CDS CCA 90 bp | ATGCCGTTCTCAAAATCCTTACACAACACTTCTGTCTTCCTGAACTaGCTGTCATTCAAGAGAGGCTTCTGTGCACTGAGGTATCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: MPFSKSLHNTSVFLN*LSFKRGFCALRYLF Trigger: GAAGAGATACCTCAGTGCACAGAAGCCTCTCTTGAATGACAGCCAGTTCAGGAAGACAGAAGTGTTGTGTAAGGATTTTGAGAACGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030345.15 ENSMUST00000106719.8 ENSMUST00000106720.9 |
||
| CDS-3UTR CAA 90 bp | GTACCTTCCAGCTACATGAACACCAATGTTCATGAGGAAGAATGGAGGCTTTTCTCTCTGAACACTTCATaGAAAAACCTAAGGACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VPSSYMNTNVHEEEWRLFSLNTS*KNLRTA Trigger: AGCAGTCCTTAGGTTTTTCAATGAAGTGTTCAGAGA...GAAAAGCCTCCATTCTTCCTCATGAACATTGGTGTTCATGTAGCTGGAAGGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
||
| CDS GCA 72 bp | TGGGCAGGCTGTCCTGGTAGTGCATGGTGGGTACGATaGTGTGCTGCAGATACTCGGCGGGCCCCGAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: WAGCPGSAWWVR*CAADTRRAPRQ Trigger: CTGTCTCGGGGCCCGCCGAGTATCTGCAGCACAGCATCGTACCCACCATGCACTACCAGGACAGCCTGCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030345.15 ENSMUST00000106719.8 ENSMUST00000106720.9 ENSMUST00000131644.2 |
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| CDS CCA 72 bp | CTGTCTTCCTGGGCAGGCTGTCCTGGTAGTGCATGGTaGGTACGATGCTGTGCTGCAGATACTCGGCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LSSWAGCPGSAW*VRCCAADTRRA Trigger: GGCCCGCCGAGTATCTGCAGCACAGCATCGTACCCACCATGCACTACCAGGACAGCCTGCCCAGGAAGACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131644.2 |
||
| CDS GCA 72 bp | GCTGGTGGACAGGATGTTGTGGTTTATCCGCTGGTATaGAGGGTCCTGATAGAGCTCAGGCAGGGTGACCCC | + |
|
Preference number: 6 (lower is better) Translates to: AGGQDVVVYPLV*RVLIELRQGDP Trigger: GGGGTCACCCTGCCTGAGCTCTATCAGGACCCTGCATACCAGCGGATAAACCACAACATCCTGTCCACCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS TCA 72 bp | TGGCCATGGTATTTGGAGCACTCAGCCATCATATGCTaGAGCTCGCCCACACTGTGCTTGGAGGGCTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: WPWYLEHSAIIC*SSPTLCLEGSL Trigger: CAGGGAGCCCTCCAAGCACAGTGTGGGCGAGCTTCAGCATATGATGGCTGAGTGCTCCAAATACCATGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS CCA 72 bp | AGTGTCGGTCAAAGCCCTGGCCCATCGCTGCTTCTTTaGTCAGCTGGCCATGGTATTTGGAGCACTCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SVGQSPGPSLLL*SAGHGIWSTQP Trigger: TGGCTGAGTGCTCCAAATACCATGGCCAGCTGACCAAAGAAGCAGCGATGGGCCAGGGCTTTGACCGACACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS TCA 72 bp | CCAGCGGTTCGTGCCGTCACCGTGCAGCATGGTGTGTaGCAAGTGAACAAGATCCTTCATCGGGAAGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: PAVRAVTVQHGV*QVNKILHREVI Trigger: GATGACTTCCCGATGAAGGATCTTGTTCACTTGTCACACACCATGCTGCACGGTGACGGCACGAACCGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS GCA 72 bp | TGGGCGAATAGTCTCTGTGCGGCCGTGTTTGAAGGCTaGAGTGCTGCAGGATTCATAGGTAGCCACTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: WANSLCAAVFEG*SAAGFIGSHCL Trigger: CAGACAGTGGCTACCTATGAATCCTGCAGCACTGCAGCCTTCAAACACGGCCGCACAGAGACTATTCGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS GCA 72 bp | CTCGCCCACACTGTGCTTGGAGGGCTCCCTGACAAATaGCTCGGAGCATCTCTTAGTAAAGATGGAAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LAHTVLGGLPDK*LGASLSKDGSW Trigger: CCAGCTTCCATCTTTACTAAGAGATGCTCCGAGGCATTTGTCAGGGAGCCCTCCAAGCACAGTGTGGGCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS GCA 72 bp | TGCAGCCTATCCAGTCATCGTGAACAGCATACGCAATaGCAAAGCCATCAGGGACCACAGGGGCAAAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: CSLSSHREQHTQ*QSHQGPQGQSH Trigger: GTGGCTTTGCCCCTGTGGTCCCTGATGGCTTTGGCATTGCGTATGCTGTTCACGATGACTGGATAGGCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS CAA 90 bp | CCAGCCCGAAGTGTCTTCAGAAACCGCACTGCAGAAACAGTCAAGTaGGTGGCCCTGGTGAGCTGGTCATTATACTCAGACTTCGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PARSVFRNRTAETVK*VALVSWSLYSDFGS Trigger: GGACCCGAAGTCTGAGTATAATGACCAGCTCACCAGGGCCACCAACTTGACTGTTTCTGCAGTGCGGTTTCTGAAGACACTTCGGGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS TCA 72 bp | ACCGCACTGCAGAAACAGTCAAGTTGGTGGCCCTGGTaGGCTGGTCATTATACTCAGACTTCGGGTCCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: TALQKQSSWWPW*AGHYTQTSGPD Trigger: ATCCGGACCCGAAGTCTGAGTATAATGACCAGCTCACCAGGGCCACCAACTTGACTGTTTCTGCAGTGCGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS TCA 72 bp | CTGGACACAGTGGAGAAACTCTCGGGCATTGCGTCCTaGGTAGGAGGAGACATTGCAGCCTATCCAGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: LDTVEKLSGIAS*VGGDIAAYPVI Trigger: GATGACTGGATAGGCTGCAATGTCTCCTCCTACTCAGGACGCAATGCCCGAGAGTTTCTCCACTGTGTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
||
| CDS GCA 72 bp | AGCACTTCTGGACACAGTGGAGAAACTCTCGGGCATTaGGTCCTGAGTAGGAGGAGACATTGCAGCCTATCC | + |
|
Preference number: 6 (lower is better) Translates to: STSGHSGETLGH*VLSRRRHCSLS Trigger: GGATAGGCTGCAATGTCTCCTCCTACTCAGGACGCAATGCCCGAGAGTTTCTCCACTGTGTCCAGAAGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS CCA 72 bp | CCATCGCTGCTTCTTTGGTCAGCTGGCCATGGTATTTaGAGCACTCAGCCATCATATGCTGAAGCTCGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PSLLLWSAGHGI*STQPSYAEARP Trigger: TGGGCGAGCTTCAGCATATGATGGCTGAGTGCTCCAAATACCATGGCCAGCTGACCAAAGAAGCAGCGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS GCA 72 bp | ACTCTCGGGCATTGCGTCCTGAGTAGGAGGAGACATTaGAGCCTATCCAGTCATCGTGAACAGCATACGCAA | + |
|
Preference number: 6 (lower is better) Translates to: TLGHCVLSRRRH*SLSSHREQHTQ Trigger: TTGCGTATGCTGTTCACGATGACTGGATAGGCTGCAATGTCTCCTCCTACTCAGGACGCAATGCCCGAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106720.9 |
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| CDS CCA 72 bp | TATCAAACCAGCGGTTCGTGCCGTCACCGTGCAGCATaGTGTGTGACAAGTGAACAAGATCCTTCATCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: YQTSGSCRHRAA*CVTSEQDPSSG Trigger: TCCCGATGAAGGATCTTGTTCACTTGTCACACACCATGCTGCACGGTGACGGCACGAACCGCTGGTTTGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
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| CDS TCA 72 bp | TTCGTGCCGTCACCGTGCAGCATGGTGTGTGACAAGTaGACAAGATCCTTCATCGGGAAGTCATCTAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: FVPSPCSMVCDK*TRSFIGKSSKQ Trigger: CTGCTTAGATGACTTCCCGATGAAGGATCTTGTTCACTTGTCACACACCATGCTGCACGGTGACGGCACGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
||
| CDS CCA 72 bp | AAATGCCTCGGAGCATCTCTTAGTAAAGATGGAAGCTaGGCGAATAGTCTCTGTGCGGCCGTGTTTGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: KCLGASLSKDGS*ANSLCAAVFEG Trigger: GCCTTCAAACACGGCCGCACAGAGACTATTCGCCCAGCTTCCATCTTTACTAAGAGATGCTCCGAGGCATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
||
| CDS CCA 72 bp | CGTTCTCAAAATCCTTACACAACACTTCTGTCTTCCTaGGCAGGCTGTCCTGGTAGTGCATGGTGGGTACGA | + |
|
Preference number: 6 (lower is better) Translates to: RSQNPYTTLLSS*AGCPGSAWWVR Trigger: TCGTACCCACCATGCACTACCAGGACAGCCTGCCCAGGAAGACAGAAGTGTTGTGTAAGGATTTTGAGAACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131644.2 |
||
| CDS TCA 72 bp | GAGTCCACTTTCCTCAGGGTTTCCTCATTGCCACCATaGATCAACTTCTGTCTGAGCTCTGCCCAGACATCT | + |
|
Preference number: 6 (lower is better) Translates to: ESTFLRVSSLPP*INFCLSSAQTS Trigger: AGATGTCTGGGCAGAGCTCAGACAGAAGTTGATTCATGGTGGCAATGAGGAAACCCTGAGGAAAGTGGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
||
| CDS CCA 72 bp | ACTGCAGAAACAGTCAAGTTGGTGGCCCTGGTGAGCTaGTCATTATACTCAGACTTCGGGTCCGGATTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: TAETVKLVALVS*SLYSDFGSGLN Trigger: ATTCAATCCGGACCCGAAGTCTGAGTATAATGACCAGCTCACCAGGGCCACCAACTTGACTGTTTCTGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
||
| CDS CCA 72 bp | CCCGAAGTGTCTTCAGAAACCGCACTGAGATGTAGCTaGTGTGCTTATTCTGTTTATCCTGAGCGAGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PEVSSETALRCS*CAYSVYPERAG Trigger: ACCTGCTCGCTCAGGATAAACAGAATAAGCACACCAGCTACATCTCAGTGCGGTTTCTGAAGACACTTCGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106719.8 |
||
| CDS CAA 72 bp | AGTGTCTTCAGAAACCGCACTGCAGAAACAGTCAAGTaGGTGGCCCTGGTGAGCTGGTCATTATACTCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: SVFRNRTAETVK*VALVSWSLYSD Trigger: GTCTGAGTATAATGACCAGCTCACCAGGGCCACCAACTTGACTGTTTCTGCAGTGCGGTTTCTGAAGACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
||
| CDS CAA 72 bp | CACGCATGCTCGAAGTGGACTGCAGCAGTGCCATCTTaGGCTACAATGAGGTTAAAGGACTTATCAAACCAG | + |
|
Preference number: 6 (lower is better) Translates to: HACSKWTAAVPS*ATMRLKDLSNQ Trigger: CTGGTTTGATAAGTCCTTTAACCTCATTGTAGCCAAAGATGGCACTGCTGCAGTCCACTTCGAGCATGCGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
||
| CDS CCA 72 bp | TTAAATACATATCAAACCAGGGGCCTGAGATGTAGCTaGTGTGCTTATTCTGTTTATCCTGAGCGAGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LNTYQTRGLRCS*CAYSVYPERAG Trigger: ACCTGCTCGCTCAGGATAAACAGAATAAGCACACCAGCTACATCTCAGGCCCCTGGTTTGATATGTATTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030345.15 |
||
| CDS CAA 72 bp | AAATGTCCTTTTCTTAGGACCAGGAGGTGTCTAGCCTaGGTATCAGTAAAGAGTTCATCACGACTGGGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: KCPFLRTRRCLA*VSVKSSSRLGL Trigger: CAAACCCAGTCGTGATGAACTCTTTACTGATACCAAGGCTAGACACCTCCTGGTCCTAAGAAAAGGACATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106719.8 |
||
| CDS CAA 90 bp | AGGTGTCTAGCCTTGGTATCAGTAAAGAGTTCATCACGACTGGGTTaGGGTATACGAGTTGAATTGAAAAGCCGAAAATATTGGGACATA | + |
|
Preference number: 6 (lower is better) Translates to: RCLALVSVKSSSRLG*GIRVELKSRKYWDI Trigger: TATGTCCCAATATTTTCGGCTTTTCAATTCAACTCGTATACCCAAACCCAGTCGTGATGAACTCTTTACTGATACCAAGGCTAGACACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106719.8 |
||
| CDS TCA 72 bp | AAAGAGTTCATCACGACTGGGTTTGGGTATACGAGTTaGATTGAAAAGCCGAAAATATTGGGACATATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: KEFITTGFGYTS*IEKPKILGHIQ Trigger: CTGGATATGTCCCAATATTTTCGGCTTTTCAATTCAACTCGTATACCCAAACCCAGTCGTGATGAACTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106719.8 |
||
| CDS CAA 72 bp | GCCTTGGTATCAGTAAAGAGTTCATCACGACTGGGTTaGGGTATACGAGTTGAATTGAAAAGCCGAAAATAT | + |
|
Preference number: 6 (lower is better) Translates to: ALVSVKSSSRLG*GIRVELKSRKY Trigger: ATATTTTCGGCTTTTCAATTCAACTCGTATACCCAAACCCAGTCGTGATGAACTCTTTACTGATACCAAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030345.15 ENSMUST00000106719.8 |
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