RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CPT1C (Mus musculus)

Ensembl gene IDs: ENSMUSG00000007783

Ensembl transcript IDs: ENSMUST00000063761.8, ENSMUST00000211862.2, ENSMUST00000212255.2, ENSMUST00000212836.2

Found 192 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp GGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTCCGCGGGAGCGCGCGTTaGAAGCTGAAGAGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: GNPRYPCLRQPSPGSNTFRGSAR*KLKSLG
Trigger: CCCGAGGCTCTTCAGCTTCCAACGCGCGCTCCCGCG...GAAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp AGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGGGCGCGGGAGCGCGCGTTaGAAGCTGAAGAGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: SPGSNTFHPEGDQLPAEGRGSAR*KLKSLG
Trigger: CCCGAGGCTCTTCAGCTTCCAACGCGCGCTCCCGCG...CCCCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp GGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTCCAGCCTCCAGGGCGGTaGCTGCGTGGGTCTTCACCG +
Preference number: 4 (lower is better)
Translates to: GNPRYPCLRQPSPGSNTFQPPGR*LRGSSP
Trigger: CGGTGAAGACCCACGCAGCCACCGCCCTGGAGGCTG...GAAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp TGGGTGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACTGCGGGGTCCTCTCTaGTCAGTCCCGCGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: WVWESPIPLSAPAKPWEQLRGPL*SVPRAQ
Trigger: CTGAGCCCGCGGGACTGACCAGAGAGGACCCCGCAG...TTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp GGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTCCAGGCGCTGGGGCTGTaGCAGGGTAGGGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GNPRYPCLRQPSPGSNTFQALGL*QGRVRV
Trigger: CACCCTGACCCTACCCTGCCACAGCCCCAGCGCCTG...GAAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp GTGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACTCCCACTGCAGGCGCTaGGGCTGTGGCAGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: VWESPIPLSAPAKPWEQHSHCRR*GCGRVG
Trigger: CCCTACCCTGCCACAGCCCCAGCGCCTGCAGTGGGA...GTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp GGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTCTCCCACTGCAGGCGCTaGGGCTGTGGCAGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: GNPRYPCLRQPSPGSNTFSHCRR*GCGRVG
Trigger: CCCTACCCTGCCACAGCCCCAGCGCCTGCAGTGGGA...GAAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR GCA 90 bp GTGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACTTGCGCACGGTCTCCTaGGCCGAGGGCACTGGCTGT +
Preference number: 4 (lower is better)
Translates to: VWESPIPLSAPAKPWEQHLRTVS*AEGTGC
Trigger: ACAGCCAGTGCCCTCGGCGCAGGAGACCGTGCGCAA...GTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR GCA 90 bp GGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTCTTGCGCACGGTCTCCTaGGCCGAGGGCACTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GNPRYPCLRQPSPGSNTFLRTVS*AEGTGC
Trigger: ACAGCCAGTGCCCTCGGCGCAGGAGACCGTGCGCAA...GAAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR GCA 90 bp GTGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACTCTGGAAGGTCCCACTaGAGGCGCTGGGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: VWESPIPLSAPAKPWEQHSGRSH*RRWGCG
Trigger: GCCACAGCCCCAGCGCCTGCAGTGGGACCTTCCAGA...GTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR GCA 90 bp TGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTCTGGAAGGTCCCACTaGAGGCGCTGGGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: CGNPRYPCLRQPSPGSNTSGRSH*RRWGCG
Trigger: GCCACAGCCCCAGCGCCTGCAGTGGGACCTTCCAGA...GGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp CAAGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGCAGCCTCCAGGGCGGTaGCTGCGTGGGTCTTCACCG +
Preference number: 4 (lower is better)
Translates to: QALGATPSILRETSSLLRQPPGR*LRGSSP
Trigger: CGGTGAAGACCCACGCAGCCACCGCCCTGGAGGCTG...CCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp CAAGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGCTGCGGGGTCCTCTCTaGTCAGTCCCGCGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: QALGATPSILRETSSLLRLRGPL*SVPRAQ
Trigger: CTGAGCCCGCGGGACTGACCAGAGAGGACCCCGCAG...CCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp CAAGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGCAGGCGCTGGGGCTGTaGCAGGGTAGGGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: QALGATPSILRETSSLLRQALGL*QGRVRV
Trigger: CACCCTGACCCTACCCTGCCACAGCCCCAGCGCCTG...CCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR TCA 90 bp AGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGGGAAGAACCCCTGGAGCTaGTGGTGCTGTCCGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SPGSNTFHPEGDQLPAEGKNPWS*WCCPPQ
Trigger: CTGGGGCGGACAGCACCATCAGCTCCAGGGGTTCTT...CCCCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR TCA 90 bp GTGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACAAGAACCCCTGGAGCTaGTGGTGCTGTCCGCCCCAG +
Preference number: 4 (lower is better)
Translates to: VWESPIPLSAPAKPWEQHKNPWS*WCCPPQ
Trigger: CTGGGGCGGACAGCACCATCAGCTCCAGGGGTTCTT...GTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR TCA 90 bp GTGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACACCGACTCCCGCACCTaGGCCCACATACTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: VWESPIPLSAPAKPWEQHTDSRT*AHILLG
Trigger: TCCCAGGAGTATGTGGGCTCAGGTGCGGGAGTCGGT...GTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR TCA 90 bp GGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTCACCGACTCCCGCACCTaGGCCCACATACTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: GNPRYPCLRQPSPGSNTFTDSRT*AHILLG
Trigger: TCCCAGGAGTATGTGGGCTCAGGTGCGGGAGTCGGT...GAAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp TGGGTGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAATGCCAGACAAGGTCTTaGCTCCCCTCAGGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: WVWESPIPLSAPAKPWEQCQTRS*LPSGPA
Trigger: CGCTGGCCCTGAGGGGAGCCAAGACCTTGTCTGGCA...TTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp AGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGGGTGCCAGACAAGGTCTTaGCTCCCCTCAGGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: SPGSNTFHPEGDQLPAEGCQTRS*LPSGPA
Trigger: CGCTGGCCCTGAGGGGAGCCAAGACCTTGTCTGGCA...CCCCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp TGGGTGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAATGCTGCGACTGGACCTaGGTCAGGAAGGGCGACTGC +
Preference number: 4 (lower is better)
Translates to: WVWESPIPLSAPAKPWEQCCDWT*VRKGDC
Trigger: GCAGTCGCCCTTCCTGACCCAGGTCCAGTCGCAGCA...TTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR TCA 90 bp GTGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACGCCACACTGGCGAGCTaGGCTCTACTTCTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: VWESPIPLSAPAKPWEQHATLAS*ALLLPH
Trigger: ATGGGGCAGAAGTAGAGCTCAGCTCGCCAGTGTGGC...GTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR TCA 90 bp AGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGGGGAGGACATGGCGCCATaGGGTTCCAGAAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SPGSNTFHPEGDQLPAEGEDMAP*GSRSQP
Trigger: TGGCTGGCTTCTGGAACCTCATGGCGCCATGTCCTC...CCCCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR GCA 90 bp TGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCGTCAGGAAGGGCGACTaGATATGGAGGAGCCGGGAC +
Preference number: 4 (lower is better)
Translates to: CGNPRYPCLRQPSPGSNTVRKGD*IWRSRD
Trigger: GTCCCGGCTCCTCCATATGCAGTCGCCCTTCCTGAC...GGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR GCA 90 bp TGGGTGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAAGTCAGGAAGGGCGACTaGATATGGAGGAGCCGGGAC +
Preference number: 4 (lower is better)
Translates to: WVWESPIPLSAPAKPWEQVRKGD*IWRSRD
Trigger: GTCCCGGCTCCTCCATATGCAGTCGCCCTTCCTGAC...TTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp GTGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACAGGGAAGGGTCCAGCTaGAGGAGACAGGCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: VWESPIPLSAPAKPWEQHREGSS*RRQASW
Trigger: CCAGCTTGCCTGTCTCCTCCAGCTGGACCCTTCCCT...GTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp AGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGGGAGGGAAGGGTCCAGCTaGAGGAGACAGGCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: SPGSNTFHPEGDQLPAEGREGSS*RRQASW
Trigger: CCAGCTTGCCTGTCTCCTCCAGCTGGACCCTTCCCT...CCCCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp GTGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCCAGCCAGGTCTTCGTaGGTGAGGACATGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: VWESPIPLSAPAKPWEQHPARSS*VRTWRH
Trigger: ATGGCGCCATGTCCTCACCCACGAAGACCTGGCTGG...GTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp TGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCCCAGCCAGGTCTTCGTaGGTGAGGACATGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: CGNPRYPCLRQPSPGSNTPARSS*VRTWRH
Trigger: ATGGCGCCATGTCCTCACCCACGAAGACCTGGCTGG...GGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp GTGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTCAAGGGGACAGGCTaGGGAGGGGTCATCCAGGAT +
Preference number: 4 (lower is better)
Translates to: VWESPIPLSAPAKPWEQHLKGTG*GGVIQD
Trigger: ATCCTGGATGACCCCTCCCCAGCCTGTCCCCTTGAG...GTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp TGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTCAGGGCCAGCGAGATaGACGGCTGGATCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: CGNPRYPCLRQPSPGSNTSGPAR*TAGSAL
Trigger: CAGAGCAGATCCAGCCGTCCATCTCGCTGGCCCTGA...GGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp CAAGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGTGCTGCGACTGGACCTaGGTCAGGAAGGGCGACTGC +
Preference number: 4 (lower is better)
Translates to: QALGATPSILRETSSLLRCCDWT*VRKGDC
Trigger: GCAGTCGCCCTTCCTGACCCAGGTCCAGTCGCAGCA...CCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp TGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCGCACAGGGACCTGGCTaGTGGACAGCAGCCATTGCT +
Preference number: 4 (lower is better)
Translates to: CGNPRYPCLRQPSPGSNTAQGPG*WTAAIA
Trigger: AGCAATGGCTGCTGTCCACCAGCCAGGTCCCTGTGC...GGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp GGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTCGCACAGGGACCTGGCTaGTGGACAGCAGCCATTGCT +
Preference number: 4 (lower is better)
Translates to: GNPRYPCLRQPSPGSNTFAQGPG*WTAAIA
Trigger: AGCAATGGCTGCTGTCCACCAGCCAGGTCCCTGTGC...GAAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR TCA 90 bp TGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTGCCACACTGGCGAGCTaGGCTCTACTTCTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: WESPIPLSAPAKPWEQHLATLAS*ALLLPH
Trigger: ATGGGGCAGAAGTAGAGCTCAGCTCGCCAGTGTGGC...AAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR TCA 90 bp CAAGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGGAGGACATGGCGCCATaGGGTTCCAGAAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: QALGATPSILRETSSLLREDMAP*GSRSQP
Trigger: TGGCTGGCTTCTGGAACCTCATGGCGCCATGTCCTC...CCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR TCA 90 bp TGGGTGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAAATGAGTGTTCCACGCTaGGGCCCAGCTTCCCATTGG +
Preference number: 4 (lower is better)
Translates to: WVWESPIPLSAPAKPWEQMSVPR*GPASHW
Trigger: CCAATGGGAAGCTGGGCCTCAGCGTGGAACACTCAT...TTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR TCA 90 bp TGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTGCTGCCCCAGCCGGTaGGAGTCTGTTTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: CGNPRYPCLRQPSPGSNTCCPSR*ESVSVL
Trigger: AAGCACAGAAACAGACTCTCACCGGCTGGGGCAGCA...GGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR TCA 90 bp GTGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACTGCTGCCCCAGCCGGTaGGAGTCTGTTTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: VWESPIPLSAPAKPWEQHCCPSR*ESVSVL
Trigger: AAGCACAGAAACAGACTCTCACCGGCTGGGGCAGCA...GTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR GCA 90 bp GTGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCAGACACGCCAGAGATaGCTTTTCCAGGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: VWESPIPLSAPAKPWEQHQTRQR*LFQERR
Trigger: CCTGCGCTCCTGGAAAAGGCATCTCTGGCGTGTCTG...GTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR GCA 90 bp GGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTCCGGAAGTGGGCCAGCTaGAGGACCAACTGGATGAAG +
Preference number: 4 (lower is better)
Translates to: GNPRYPCLRQPSPGSNTFRKWAS*RTNWMK
Trigger: CTTCATCCAGTTGGTCCTGCAGCTGGCCCACTTCCG...GAAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR GCA 90 bp AGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGGGCGGAAGTGGGCCAGCTaGAGGACCAACTGGATGAAG +
Preference number: 4 (lower is better)
Translates to: SPGSNTFHPEGDQLPAEGRKWAS*RTNWMK
Trigger: CTTCATCCAGTTGGTCCTGCAGCTGGCCCACTTCCG...CCCCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR GCA 90 bp TGGGTGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAAATCAGGTGTGTCTGCTaGACAGGGACCTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: WVWESPIPLSAPAKPWEQIRCVC*TGTWLV
Trigger: CACCAGCCAGGTCCCTGTGCAGCAGACACACCTGAT...TTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR GCA 90 bp TGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCATCAGGTGTGTCTGCTaGACAGGGACCTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: CGNPRYPCLRQPSPGSNTIRCVC*TGTWLV
Trigger: CACCAGCCAGGTCCCTGTGCAGCAGACACACCTGAT...GGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp AGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGGGTCCAGAAGCCAGCCATaGTGGGACAGAAGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: SPGSNTFHPEGDQLPAEGSRSQP*WDRRSL
Trigger: GAGGCTCCTTCTGTCCCACCATGGCTGGCTTCTGGA...CCCCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp GGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTCTGCCGGTTCAGCAGGTaGCGATACAGGAGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: GNPRYPCLRQPSPGSNTFCRFSR*RYRSRV
Trigger: TACCCTGCTCCTGTATCGCCACCTGCTGAACCGGCA...GAAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp TGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCAAGAATCTGCCCCGGTaGAAGACAGCCACGTGTCGG +
Preference number: 4 (lower is better)
Translates to: CGNPRYPCLRQPSPGSNTKNLPR*KTATCR
Trigger: CCGACACGTGGCTGTCTTCCACCGGGGCAGATTCTT...GGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp GGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTCAAGAATCTGCCCCGGTaGAAGACAGCCACGTGTCGG +
Preference number: 4 (lower is better)
Translates to: GNPRYPCLRQPSPGSNTFKNLPR*KTATCR
Trigger: CCGACACGTGGCTGTCTTCCACCGGGGCAGATTCTT...GAAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp TGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTCTCAAGGGGACAGGCTaGGGAGGGGTCATCCAGGAT +
Preference number: 4 (lower is better)
Translates to: WESPIPLSAPAKPWEQHLLKGTG*GGVIQD
Trigger: ATCCTGGATGACCCCTCCCCAGCCTGTCCCCTTGAG...AAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp TGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTTCAGGGCCAGCGAGATaGACGGCTGGATCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: WESPIPLSAPAKPWEQHLSGPAR*TAGSAL
Trigger: CAGAGCAGATCCAGCCGTCCATCTCGCTGGCCCTGA...AAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp GGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTCGCCTTCAGTAGAGCCTaGTGCTTGTCCACGGCCACT +
Preference number: 4 (lower is better)
Translates to: GNPRYPCLRQPSPGSNTFAFSRA*CLSTAT
Trigger: AGTGGCCGTGGACAAGCACCAGGCTCTACTGAAGGC...GAAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR TCA 90 bp CAAGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGATGAGTGTTCCACGCTaGGGCCCAGCTTCCCATTGG +
Preference number: 4 (lower is better)
Translates to: QALGATPSILRETSSLLRMSVPR*GPASHW
Trigger: CCAATGGGAAGCTGGGCCTCAGCGTGGAACACTCAT...CCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR GCA 90 bp GGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTCCTGAAGAGCCTCGGGTaGCTCCCGGAAAAGATTCTG +
Preference number: 4 (lower is better)
Translates to: GNPRYPCLRQPSPGSNTFLKSLG*LPEKIL
Trigger: CAGAATCTTTTCCGGGAGGCACCCGAGGCTCTTCAG...GAAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR GCA 90 bp TGGGTGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACTACACGGAAGAATCTaGCCCGGTGGAAGACAGCCA +
Preference number: 4 (lower is better)
Translates to: WVWESPIPLSAPAKPWEQLHGRI*PGGRQP
Trigger: TGGCTGTCTTCCACCGGGGCAGATTCTTCCGTGTAG...TTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR GCA 90 bp GGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTCCTACACGGAAGAATCTaGCCCGGTGGAAGACAGCCA +
Preference number: 4 (lower is better)
Translates to: GNPRYPCLRQPSPGSNTFLHGRI*PGGRQP
Trigger: TGGCTGTCTTCCACCGGGGCAGATTCTTCCGTGTAG...GAAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR GCA 90 bp TGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTCACTGTCTCTGTCCTaGCTTCCAGGAACAGTCGGG +
Preference number: 4 (lower is better)
Translates to: CGNPRYPCLRQPSPGSNTSLSLS*LPGTVG
Trigger: CCCGACTGTTCCTGGAAGGCAGGACAGAGACAGTGA...GGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR GCA 90 bp TGGGTGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAATCACTGTCTCTGTCCTaGCTTCCAGGAACAGTCGGG +
Preference number: 4 (lower is better)
Translates to: WVWESPIPLSAPAKPWEQSLSLS*LPGTVG
Trigger: CCCGACTGTTCCTGGAAGGCAGGACAGAGACAGTGA...TTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR GCA 90 bp AGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGGGTCAATCAGGTGTGTCTaGTGCACAGGGACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SPGSNTFHPEGDQLPAEGSIRCV*CTGTWL
Trigger: CAGCCAGGTCCCTGTGCAGCAGACACACCTGATTGA...CCCCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp GTGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACAGAAGCCAGCCATGGTaGGACAGAAGGAGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: VWESPIPLSAPAKPWEQHRSQPW*DRRSLR
Trigger: TCTGAGGCTCCTTCTGTCCCACCATGGCTGGCTTCT...GTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp TGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTTCCAGAAGCCAGCCATaGTGGGACAGAAGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: WESPIPLSAPAKPWEQHLSRSQP*WDRRSL
Trigger: GAGGCTCCTTCTGTCCCACCATGGCTGGCTTCTGGA...AAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp TGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTTGCCGGTTCAGCAGGTaGCGATACAGGAGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: WESPIPLSAPAKPWEQHLCRFSR*RYRSRV
Trigger: TACCCTGCTCCTGTATCGCCACCTGCTGAACCGGCA...AAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp AGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGGGTCATCCAGGATGTCCTaGAACTGCTGTTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SPGSNTFHPEGDQLPAEGSSRMS*NCCSRA
Trigger: GGCCCTGGAACAGCAGTTCCAGGACATCCTGGATGA...CCCCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp CAAGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGGCCTTCAGTAGAGCCTaGTGCTTGTCCACGGCCACT +
Preference number: 4 (lower is better)
Translates to: QALGATPSILRETSSLLRAFSRA*CLSTAT
Trigger: AGTGGCCGTGGACAAGCACCAGGCTCTACTGAAGGC...CCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp GGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTCAAGGGCGACTGCATATaGAGGAGCCGGGACATGATG +
Preference number: 4 (lower is better)
Translates to: GNPRYPCLRQPSPGSNTFKGDCI*RSRDMM
Trigger: CATCATGTCCCGGCTCCTCCATATGCAGTCGCCCTT...GAAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR TCA 90 bp AGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGGGTGCAAAAACTGCTGCTaGCAAGAACCCCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SPGSNTFHPEGDQLPAEGCKNCC*QEPLEL
Trigger: CAGCTCCAGGGGTTCTTGTCAGCAGCAGTTTTTGCA...CCCCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR TCA 90 bp CAAGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGGCAGCGGTGTGGGGGTaGCGTACAGAAAATCCATCA +
Preference number: 4 (lower is better)
Translates to: QALGATPSILRETSSLLRAAVWG*RTENPS
Trigger: TGATGGATTTTCTGTACGTCACCCCCACACCGCTGC...CCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR TCA 90 bp TGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTGCAGCGGTGTGGGGGTaGCGTACAGAAAATCCATCA +
Preference number: 4 (lower is better)
Translates to: WESPIPLSAPAKPWEQHLAAVWG*RTENPS
Trigger: TGATGGATTTTCTGTACGTCACCCCCACACCGCTGC...AAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR GCA 90 bp TGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTCTGAAGAGCCTCGGGTaGCTCCCGGAAAAGATTCTG +
Preference number: 4 (lower is better)
Translates to: WESPIPLSAPAKPWEQHLLKSLG*LPEKIL
Trigger: CAGAATCTTTTCCGGGAGGCACCCGAGGCTCTTCAG...AAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR GCA 90 bp TGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTGGCAGGCTTCTCTGGTaGAAGACCTCACTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: WESPIPLSAPAKPWEQHLGRLLW*KTSLSL
Trigger: CAGAGACAGTGAGGTCTTGCACCAGAGAAGCCTGCC...AAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR GCA 90 bp CAAGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGGGCAGGCTTCTCTGGTaGAAGACCTCACTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: QALGATPSILRETSSLLRGRLLW*KTSLSL
Trigger: CAGAGACAGTGAGGTCTTGCACCAGAGAAGCCTGCC...CCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR GCA 90 bp CAAGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGTCAATCAGGTGTGTCTaGTGCACAGGGACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QALGATPSILRETSSLLRSIRCV*CTGTWL
Trigger: CAGCCAGGTCCCTGTGCAGCAGACACACCTGATTGA...CCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR GCA 90 bp GGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTCAACTGGCGCTTGAAATaGTGTCCAACCCGGAACAGG +
Preference number: 4 (lower is better)
Translates to: GNPRYPCLRQPSPGSNTFNWRLK*CPTRNR
Trigger: CCTGTTCCGGGTTGGACAGCATTTCAAGCGCCAGTT...GAAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp GTGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACAACATCCTCTCATACTaGGCGGAACACAAGGGTCGC +
Preference number: 4 (lower is better)
Translates to: VWESPIPLSAPAKPWEQHNILSY*AEHKGR
Trigger: GCGACCCTTGTGTTCCGCCCAGTATGAGAGGATGTT...GTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp TGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTTCATCCAGGATGTCCTaGAACTGCTGTTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: WESPIPLSAPAKPWEQHLSSRMS*NCCSRA
Trigger: GGCCCTGGAACAGCAGTTCCAGGACATCCTGGATGA...AAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp GGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTCGGAACAGTCGGGTCATaGCTGACTCATAAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: GNPRYPCLRQPSPGSNTFGTVGS*LTHKSG
Trigger: GCCTGACTTATGAGTCAGCCATGACCCGACTGTTCC...GAAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp AGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGGGGGAACAGTCGGGTCATaGCTGACTCATAAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: SPGSNTFHPEGDQLPAEGGTVGS*LTHKSG
Trigger: GCCTGACTTATGAGTCAGCCATGACCCGACTGTTCC...CCCCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp GGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTCAGGGCGAGGCAATGTTaGTCTGTCTCCTTGTTGTCC +
Preference number: 4 (lower is better)
Translates to: GNPRYPCLRQPSPGSNTFRARQC*SVSLLS
Trigger: GGACAACAAGGAGACAGACCAACATTGCCTCGCCCT...GAAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp TGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTAAGGGCGACTGCATATaGAGGAGCCGGGACATGATG +
Preference number: 4 (lower is better)
Translates to: WESPIPLSAPAKPWEQHLKGDCI*RSRDMM
Trigger: CATCATGTCCCGGCTCCTCCATATGCAGTCGCCCTT...AAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR TCA 90 bp GGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTCGCAGGACCAACTGGATaGAGCTGTCTGAAGAGACAT +
Preference number: 4 (lower is better)
Translates to: GNPRYPCLRQPSPGSNTFAGPTG*SCLKRH
Trigger: ATGTCTCTTCAGACAGCTTCATCCAGTTGGTCCTGC...GAAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR GCA 90 bp CAAGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGAACTGGCGCTTGAAATaGTGTCCAACCCGGAACAGG +
Preference number: 4 (lower is better)
Translates to: QALGATPSILRETSSLLRNWRLK*CPTRNR
Trigger: CCTGTTCCGGGTTGGACAGCATTTCAAGCGCCAGTT...CCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp TGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTAACATCCTCTCATACTaGGCGGAACACAAGGGTCGC +
Preference number: 4 (lower is better)
Translates to: WESPIPLSAPAKPWEQHLNILSY*AEHKGR
Trigger: GCGACCCTTGTGTTCCGCCCAGTATGAGAGGATGTT...AAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp GTGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACTACAGTGGCCATCTGTaGCATAACCCAACTGGAAGC +
Preference number: 4 (lower is better)
Translates to: VWESPIPLSAPAKPWEQHYSGHL*HNPTGS
Trigger: GCTTCCAGTTGGGTTATGCCACAGATGGCCACTGTA...GTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp CAAGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGAGGGCGAGGCAATGTTaGTCTGTCTCCTTGTTGTCC +
Preference number: 4 (lower is better)
Translates to: QALGATPSILRETSSLLRRARQC*SVSLLS
Trigger: GGACAACAAGGAGACAGACCAACATTGCCTCGCCCT...CCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR TCA 90 bp TGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTGCAGGACCAACTGGATaGAGCTGTCTGAAGAGACAT +
Preference number: 4 (lower is better)
Translates to: WESPIPLSAPAKPWEQHLAGPTG*SCLKRH
Trigger: ATGTCTCTTCAGACAGCTTCATCCAGTTGGTCCTGC...AAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp GGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTCAGGAGACAGGCAAGCTaGATTGTACTGAAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GNPRYPCLRQPSPGSNTFRRQAS*IVLKRK
Trigger: CTTCCTCTTCAGTACAATCCAGCTTGCCTGTCTCCT...GAAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR TCA 90 bp TGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCCTGTCTGAAGAGACATaGCAGCATTTGATGAAGCTC +
Preference number: 4 (lower is better)
Translates to: CGNPRYPCLRQPSPGSNTLSEET*QHLMKL
Trigger: GAGCTTCATCAAATGCTGTCATGTCTCTTCAGACAG...GGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR TCA 90 bp TGGGTGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACTGGATGAAGCTGTCTaGAGAGACATGACAGCATTT +
Preference number: 4 (lower is better)
Translates to: WVWESPIPLSAPAKPWEQLDEAV*RDMTAF
Trigger: AAATGCTGTCATGTCTCTTCAGACAGCTTCATCCAG...TTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR GCA 90 bp GGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTCGGACATGATGTACAGTaGAAAGAGGTGACGGTCAAT +
Preference number: 4 (lower is better)
Translates to: GNPRYPCLRQPSPGSNTFGHDVQ*KEVTVN
Trigger: ATTGACCGTCACCTCTTTGCACTGTACATCATGTCC...GAAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp CAAGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGAGGAGACAGGCAAGCTaGATTGTACTGAAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: QALGATPSILRETSSLLRRRQAS*IVLKRK
Trigger: CTTCCTCTTCAGTACAATCCAGCTTGCCTGTCTCCT...CCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp TGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCGTCTTTTTCCACCCCTaGAATCCGTGTAGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: CGNPRYPCLRQPSPGSNTVFFHP*NPCSVE
Trigger: TTCAACACTACACGGATTCCAGGGGTGGAAAAAGAC...GGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp TGGGTGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAAGTCTTTTTCCACCCCTaGAATCCGTGTAGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: WVWESPIPLSAPAKPWEQVFFHP*NPCSVE
Trigger: TTCAACACTACACGGATTCCAGGGGTGGAAAAAGAC...TTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR TCA 90 bp CAAGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGCTGTCTGAAGAGACATaGCAGCATTTGATGAAGCTC +
Preference number: 4 (lower is better)
Translates to: QALGATPSILRETSSLLRLSEET*QHLMKL
Trigger: GAGCTTCATCAAATGCTGTCATGTCTCTTCAGACAG...CCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR TCA 90 bp TGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTCTGGATGAAGCTGTCTaGAGAGACATGACAGCATTT +
Preference number: 4 (lower is better)
Translates to: WESPIPLSAPAKPWEQHLLDEAV*RDMTAF
Trigger: AAATGCTGTCATGTCTCTTCAGACAGCTTCATCCAG...AAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR TCA 90 bp GTGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACGTCTGTTTCTGTGCTTaGTTTCTTGCTGGAGATATG +
Preference number: 4 (lower is better)
Translates to: VWESPIPLSAPAKPWEQHVCFCA*FLAGDM
Trigger: CATATCTCCAGCAAGAAATCAAGCACAGAAACAGAC...GTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR GCA 90 bp TGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCGATATGGAAGGTGATTaGGTTTTCCCCCATGAAGAT +
Preference number: 4 (lower is better)
Translates to: CGNPRYPCLRQPSPGSNTDMEGD*VFPHED
Trigger: ATCTTCATGGGGGAAAACGCAATCACCTTCCATATC...GGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR GCA 90 bp TGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCGAGAGTCTGTTTCTGTaGTTGATTTCTTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: CGNPRYPCLRQPSPGSNTESLFL*LISCWR
Trigger: TCTCCAGCAAGAAATCAAGCACAGAAACAGACTCTC...GGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp AGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGGGTTCTTGCTGGAGATATaGAAGGTGATTGCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: SPGSNTFHPEGDQLPAEGFLLEI*KVIAFS
Trigger: GGAAAACGCAATCACCTTCCATATCTCCAGCAAGAA...CCCCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CCA 90 bp TGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTCTTGCTGGAGATATaGAAGGTGATTGCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: CGNPRYPCLRQPSPGSNTFLLEI*KVIAFS
Trigger: GGAAAACGCAATCACCTTCCATATCTCCAGCAAGAA...GGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR TCA 90 bp TGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTGTCTGTTTCTGTGCTTaGTTTCTTGCTGGAGATATG +
Preference number: 4 (lower is better)
Translates to: WESPIPLSAPAKPWEQHLVCFCA*FLAGDM
Trigger: CATATCTCCAGCAAGAAATCAAGCACAGAAACAGAC...AAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR GCA 90 bp TGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTGATATGGAAGGTGATTaGGTTTTCCCCCATGAAGAT +
Preference number: 4 (lower is better)
Translates to: WESPIPLSAPAKPWEQHLDMEGD*VFPHED
Trigger: ATCTTCATGGGGGAAAACGCAATCACCTTCCATATC...AAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR GCA 90 bp TGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTGAGAGTCTGTTTCTGTaGTTGATTTCTTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: WESPIPLSAPAKPWEQHLESLFL*LISCWR
Trigger: TCTCCAGCAAGAAATCAAGCACAGAAACAGACTCTC...AAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS GCA 90 bp CCGAGCACAGGGCGTACAGACTCTAGGTACTTGCGCACGGTCTCCTaGGCCGAGGGCACTGGCTGTCGCGGGAGCGCGCGTTGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: PSTGRTDSRYLRTVS*AEGTGCRGSARWKL
Trigger: CAGCTTCCAACGCGCGCTCCCGCGACAGCCAGTGCCCTCGGCGCAGGAGACCGTGCGCAAGTACCTAGAGTCTGTACGCCCTGTGCTCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063761.8
ENSMUST00000211862.2
ENSMUST00000212255.2
ENSMUST00000212836.2
CDS GCA 90 bp GCCTCGGCCAGCCAGCAGAGCGTGGGCATAAGCGTCCAGGGAAGCTaGGGGGTCCTCTCTGGTCAGTCCCGCGGGCTCAGAATCGAGGGA +
Preference number: 5 (lower is better)
Translates to: ASASQQSVGISVQGS*GVLSGQSRGLRIEG
Trigger: TCCCTCGATTCTGAGCCCGCGGGACTGACCAGAGAGGACCCCGCAGCTTCCCTGGACGCTTATGCCCACGCTCTGCTGGCTGGCCGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS GCA 90 bp GAGATCTCCTGCCGGTTCAGCAGGTGGCGATACAGGAGCAGGGTATaGACAGCATTGCCCGCGCGGGCTGCCTGCAGCGGTGTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: EISCRFSRWRYRSRV*TALPARAACSGVGV
Trigger: CACCCCCACACCGCTGCAGGCAGCCCGCGCGGGCAATGCTGTGCATACCCTGCTCCTGTATCGCCACCTGCTGAACCGGCAGGAGATCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CCA 90 bp CGAGGGACACAAAGAAGGCAGCCCCTTCCACAGCCTCCAGGGCGGTaGCTGCGTGGGTCTTCACCGACTCCCGCACCTGAGCCCACATAC +
Preference number: 5 (lower is better)
Translates to: RGTQRRQPLPQPPGR*LRGSSPTPAPEPTY
Trigger: GTATGTGGGCTCAGGTGCGGGAGTCGGTGAAGACCCACGCAGCCACCGCCCTGGAGGCTGTGGAAGGGGCTGCCTTCTTTGTGTCCCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CCA 90 bp GAGATGGACGGCTGGATCTGCTCTGGAAGGTCCCACTGCAGGCGCTaGGGCTGTGGCAGGGTAGGGTCAGGGTGCCCCTTACAGTGGCCA +
Preference number: 5 (lower is better)
Translates to: EMDGWICSGRSHCRR*GCGRVGSGCPLQWP
Trigger: TGGCCACTGTAAGGGGCACCCTGACCCTACCCTGCCACAGCCCCAGCGCCTGCAGTGGGACCTTCCAGAGCAGATCCAGCCGTCCATCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS GCA 90 bp GGACACAAAGAAGGCAGCCCCTTCCACAGCCTCCAGGGCGGTGGCTaGGTGGGTCTTCACCGACTCCCGCACCTGAGCCCACATACTCCT +
Preference number: 5 (lower is better)
Translates to: GHKEGSPFHSLQGGG*VGLHRLPHLSPHTP
Trigger: AGGAGTATGTGGGCTCAGGTGCGGGAGTCGGTGAAGACCCACGCAGCCACCGCCCTGGAGGCTGTGGAAGGGGCTGCCTTCTTTGTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CAA 90 bp AGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGGGTTGCCAGACAAGGTCTaGGCTCCCCTCAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: SPGSNTFHPEGDQLPAEGLPDKV*APLRAS
Trigger: GCTGGCCCTGAGGGGAGCCAAGACCTTGTCTGGCAA...CCCCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CAA 90 bp TGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTGCCAGACAAGGTCTaGGCTCCCCTCAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: CGNPRYPCLRQPSPGSNTLPDKV*APLRAS
Trigger: GCTGGCCCTGAGGGGAGCCAAGACCTTGTCTGGCAA...GGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CAA 90 bp TGGGTGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAAGGTGGACAGCAGCCATaGCTGCGACTGGACCTGGGT +
Preference number: 5 (lower is better)
Translates to: WVWESPIPLSAPAKPWEQGGQQP*LRLDLG
Trigger: ACCCAGGTCCAGTCGCAGCAATGGCTGCTGTCCACC...TTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CCA 90 bp GCAGAGCGTGGGCATAAGCGTCCAGGGAAGCTGCGGGGTCCTCTCTaGTCAGTCCCGCGGGCTCAGAATCGAGGGACACAAAGAAGGCAG +
Preference number: 5 (lower is better)
Translates to: AERGHKRPGKLRGPL*SVPRAQNRGTQRRQ
Trigger: CTGCCTTCTTTGTGTCCCTCGATTCTGAGCCCGCGGGACTGACCAGAGAGGACCCCGCAGCTTCCCTGGACGCTTATGCCCACGCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CAA 90 bp TGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCAGTAGAGCCTGGTGCTaGTCCACGGCCACTCGGAAC +
Preference number: 5 (lower is better)
Translates to: CGNPRYPCLRQPSPGSNTSRAWC*STATRN
Trigger: GTTCCGAGTGGCCGTGGACAAGCACCAGGCTCTACT...GGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CAA 90 bp TGGGTGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAAAGTAGAGCCTGGTGCTaGTCCACGGCCACTCGGAAC +
Preference number: 5 (lower is better)
Translates to: WVWESPIPLSAPAKPWEQSRAWC*STATRN
Trigger: GTTCCGAGTGGCCGTGGACAAGCACCAGGCTCTACT...TTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CAA 90 bp CAAGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGGGTGGACAGCAGCCATaGCTGCGACTGGACCTGGGT +
Preference number: 5 (lower is better)
Translates to: QALGATPSILRETSSLLRGGQQP*LRLDLG
Trigger: ACCCAGGTCCAGTCGCAGCAATGGCTGCTGTCCACC...CCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CAA 90 bp AGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGGGCCCCTGAACTGGCGCTaGAAATGCTGTCCAACCCGG +
Preference number: 5 (lower is better)
Translates to: SPGSNTFHPEGDQLPAEGPLNWR*KCCPTR
Trigger: CCGGGTTGGACAGCATTTCAAGCGCCAGTTCAGGGG...CCCCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS GCA 90 bp ACTGGCTGTCGCGGGAGCGCGCGTTGGAAGCTGAAGAGCCTCGGGTaGCTCCCGGAAAAGATTCTGACCAATGCCAGCCAGGTCTTCGTG +
Preference number: 5 (lower is better)
Translates to: TGCRGSARWKLKSLG*LPEKILTNASQVFV
Trigger: CACGAAGACCTGGCTGGCATTGGTCAGAATCTTTTCCGGGAGGCACCCGAGGCTCTTCAGCTTCCAACGCGCGCTCCCGCGACAGCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063761.8
ENSMUST00000211862.2
ENSMUST00000212255.2
ENSMUST00000212836.2
CDS GCA 90 bp CGGTCAATCCCCTGGCCACTCATCGCCGCCTTCAGTAGAGCCTGGTaGTTGTCCACGGCCACTCGGAACAGGGCGAGGCAATGTTGGTCT +
Preference number: 5 (lower is better)
Translates to: RSIPWPLIAAFSRAW*LSTATRNRARQCWS
Trigger: AGACCAACATTGCCTCGCCCTGTTCCGAGTGGCCGTGGACAAGCACCAGGCTCTACTGAAGGCGGCGATGAGTGGCCAGGGGATTGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CCA 90 bp CTGCGTGGGTCTTCACCGACTCCCGCACCTGAGCCCACATACTCCTaGGAGCAGCAGTCAGAGCAGCTAGGTGTTCCTCAAGGGGACAGG +
Preference number: 5 (lower is better)
Translates to: LRGSSPTPAPEPTYS*EQQSEQLGVPQGDR
Trigger: CCTGTCCCCTTGAGGAACACCTAGCTGCTCTGACTGCTGCTCCCAGGAGTATGTGGGCTCAGGTGCGGGAGTCGGTGAAGACCCACGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CCA 90 bp GGGAGAAGGGGAAGACGTGGCAGTCGATGTTGCCAGACAAGGTCTTaGCTCCCCTCAGGGCCAGCGAGATGGACGGCTGGATCTGCTCTG +
Preference number: 5 (lower is better)
Translates to: GRRGRRGSRCCQTRS*LPSGPARWTAGSAL
Trigger: CAGAGCAGATCCAGCCGTCCATCTCGCTGGCCCTGAGGGGAGCCAAGACCTTGTCTGGCAACATCGACTGCCACGTCTTCCCCTTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CAA 90 bp CAAGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGCCCCTGAACTGGCGCTaGAAATGCTGTCCAACCCGG +
Preference number: 5 (lower is better)
Translates to: QALGATPSILRETSSLLRPLNWR*KCCPTR
Trigger: CCGGGTTGGACAGCATTTCAAGCGCCAGTTCAGGGG...CCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS TCA 90 bp AACTGCTGTTCCAGGGCCCGTGGGGAAAGCAGGCCATTGGGAGAGTaGGTCCCTACACGGAAGAATCTGCCCCGGTGGAAGACAGCCACG +
Preference number: 5 (lower is better)
Translates to: NCCSRARGESRPLGE*VPTRKNLPRWKTAT
Trigger: CGTGGCTGTCTTCCACCGGGGCAGATTCTTCCGTGTAGGGACTCACTCTCCCAATGGCCTGCTTTCCCCACGGGCCCTGGAACAGCAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS GCA 90 bp AGCTCTTGCCGAAGTGGGAGAAGGGGAAGACGTGGCAGTCGATGTTaGCAGACAAGGTCTTGGCTCCCCTCAGGGCCAGCGAGATGGACG +
Preference number: 5 (lower is better)
Translates to: SSCRSGRRGRRGSRC*QTRSWLPSGPARWT
Trigger: CGTCCATCTCGCTGGCCCTGAGGGGAGCCAAGACCTTGTCTGGCAACATCGACTGCCACGTCTTCCCCTTCTCCCACTTCGGCAAGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CCA 90 bp TGTGGACATCAATCAGGTGTGTCTGCTGCACAGGGACCTGGCTGGTaGACAGCAGCCATTGCTGCGACTGGACCTGGGTCAGGAAGGGCG +
Preference number: 5 (lower is better)
Translates to: CGHQSGVSAAQGPGW*TAAIAATGPGSGRA
Trigger: CGCCCTTCCTGACCCAGGTCCAGTCGCAGCAATGGCTGCTGTCCACCAGCCAGGTCCCTGTGCAGCAGACACACCTGATTGATGTCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CAA 90 bp TGGGTGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACAGGGCGAGGCAATGTaGGTCTGTCTCCTTGTTGTC +
Preference number: 5 (lower is better)
Translates to: WVWESPIPLSAPAKPWEQQGEAM*VCLLVV
Trigger: GACAACAAGGAGACAGACCAACATTGCCTCGCCCTG...TTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS GCA 90 bp GTGGCGATACAGGAGCAGGGTATGCACAGCATTGCCCGCGCGGGCTaGCTGCAGCGGTGTGGGGGTGACGTACAGAAAATCCATCATGTA +
Preference number: 5 (lower is better)
Translates to: VAIQEQGMHSIARAG*LQRCGGDVQKIHHV
Trigger: TACATGATGGATTTTCTGTACGTCACCCCCACACCGCTGCAGGCAGCCCGCGCGGGCAATGCTGTGCATACCCTGCTCCTGTATCGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CAA 90 bp AGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGGGCATTTGATGAAGCTCTaGCCGAAGTGGGAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: SPGSNTFHPEGDQLPAEGHLMKL*PKWEKG
Trigger: CCCCTTCTCCCACTTCGGCAAGAGCTTCATCAAATG...CCCCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CAA 90 bp GGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTCATAAGTCAGGCAGAATaGACCCCTGTCCCGGAAGTG +
Preference number: 5 (lower is better)
Translates to: GNPRYPCLRQPSPGSNTFISQAE*TPVPEV
Trigger: CACTTCCGGGACAGGGGTCAATTCTGCCTGACTTAT...GAAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CAA 90 bp AGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGGGATAAGTCAGGCAGAATaGACCCCTGTCCCGGAAGTG +
Preference number: 5 (lower is better)
Translates to: SPGSNTFHPEGDQLPAEGISQAE*TPVPEV
Trigger: CACTTCCGGGACAGGGGTCAATTCTGCCTGACTTAT...CCCCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CAA 90 bp TGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTCAGGGCGAGGCAATGTaGGTCTGTCTCCTTGTTGTC +
Preference number: 5 (lower is better)
Translates to: WESPIPLSAPAKPWEQHLQGEAM*VCLLVV
Trigger: GACAACAAGGAGACAGACCAACATTGCCTCGCCCTG...AAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CAA 90 bp TGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCGAGGATGTAGGGGTATaGGGGTCCACAGTCTTACAG +
Preference number: 5 (lower is better)
Translates to: CGNPRYPCLRQPSPGSNTEDVGV*GSTVLQ
Trigger: CTGTAAGACTGTGGACCCCAATACCCCTACATCCTC...GGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS TCA 90 bp CCTCCCGGAAAAGATTCTGACCAATGCCAGCCAGGTCTTCGTGGGTaGGGACATGGCGCCATGAGGTTCCAGAAGCCAGCCATGGTGGGA +
Preference number: 5 (lower is better)
Translates to: PPGKDSDQCQPGLRG*GHGAMRFQKPAMVG
Trigger: TCCCACCATGGCTGGCTTCTGGAACCTCATGGCGCCATGTCCTCACCCACGAAGACCTGGCTGGCATTGGTCAGAATCTTTTCCGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063761.8
ENSMUST00000211862.2
ENSMUST00000212255.2
ENSMUST00000212836.2
CDS TCA 90 bp ATACTGGGCGGAACACAAGGGTCGCATCCCCATCAGCAATGTCGGTaGGATCTCCTGCCGGTTCAGCAGGTGGCGATACAGGAGCAGGGT +
Preference number: 5 (lower is better)
Translates to: ILGGTQGSHPHQQCR*DLLPVQQVAIQEQG
Trigger: ACCCTGCTCCTGTATCGCCACCTGCTGAACCGGCAGGAGATCTCACCGACATTGCTGATGGGGATGCGACCCTTGTGTTCCGCCCAGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS TCA 90 bp GGCCATCTGTGGCATAACCCAACTGGAAGCACTCTGTGGCCAGGGTaGACTCCCACAAATGCCCTGAGACAGGGCAGTCGGCCCATGAGT +
Preference number: 5 (lower is better)
Translates to: GHLWHNPTGSTLWPG*TPTNALRQGSRPMS
Trigger: ACTCATGGGCCGACTGCCCTGTCTCAGGGCATTTGTGGGAGTTCACCCTGGCCACAGAGTGCTTCCAGTTGGGTTATGCCACAGATGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS GCA 90 bp CAGGAAGGGCGACTGCATATGGAGGAGCCGGGACATGATGTACAGTaGAAAGAGGTGACGGTCAATCCCCTGGCCACTCATCGCCGCCTT +
Preference number: 5 (lower is better)
Translates to: QEGRLHMEEPGHDVQ*KEVTVNPLATHRRL
Trigger: AAGGCGGCGATGAGTGGCCAGGGGATTGACCGTCACCTCTTTGCACTGTACATCATGTCCCGGCTCCTCCATATGCAGTCGCCCTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CAA 90 bp TGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTGGTCTGTCTCCTTGTaGTCCATGGCTCTCACAAAC +
Preference number: 5 (lower is better)
Translates to: CGNPRYPCLRQPSPGSNTWSVSL*SMALTN
Trigger: GTTTGTGAGAGCCATGGACAACAAGGAGACAGACCA...GGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CAA 90 bp AGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGGGTGGTCTGTCTCCTTGTaGTCCATGGCTCTCACAAAC +
Preference number: 5 (lower is better)
Translates to: SPGSNTFHPEGDQLPAEGWSVSL*SMALTN
Trigger: GTTTGTGAGAGCCATGGACAACAAGGAGACAGACCA...CCCCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CAA 90 bp TGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTGAGGATGTAGGGGTATaGGGGTCCACAGTCTTACAG +
Preference number: 5 (lower is better)
Translates to: WESPIPLSAPAKPWEQHLEDVGV*GSTVLQ
Trigger: CTGTAAGACTGTGGACCCCAATACCCCTACATCCTC...AAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CCA 90 bp AATTGTGGACATCAATCAGGTGTGTCTGCTGCACAGGGACCTGGCTaGTGGACAGCAGCCATTGCTGCGACTGGACCTGGGTCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: NCGHQSGVSAAQGPG*WTAAIAATGPGSGR
Trigger: CCTTCCTGACCCAGGTCCAGTCGCAGCAATGGCTGCTGTCCACCAGCCAGGTCCCTGTGCAGCAGACACACCTGATTGATGTCCACAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CAA 90 bp GGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTCGGAATCCGTGTAGTGTaGAACATCCTCTCATACTGG +
Preference number: 5 (lower is better)
Translates to: GNPRYPCLRQPSPGSNTFGIRVV*NILSYW
Trigger: CCAGTATGAGAGGATGTTCAACACTACACGGATTCC...GAAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CAA 90 bp TGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTGGAATCCGTGTAGTGTaGAACATCCTCTCATACTGG +
Preference number: 5 (lower is better)
Translates to: WESPIPLSAPAKPWEQHLGIRVV*NILSYW
Trigger: CCAGTATGAGAGGATGTTCAACACTACACGGATTCC...AAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CAA 90 bp GTGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACTCTGTGCTTGATTTCTaGCTGGAGATATGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: VWESPIPLSAPAKPWEQHSVLDF*LEIWKV
Trigger: CACCTTCCATATCTCCAGCAAGAAATCAAGCACAGA...GTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS GCA 90 bp TCTCCTTGTTGTCCATGGCTCTCACAAACTGGCAGGCTTCTCTGGTaGAAGACCTCACTGTCTCTGTCCTGCCTTCCAGGAACAGTCGGG +
Preference number: 5 (lower is better)
Translates to: SPCCPWLSQTGRLLW*KTSLSLSCLPGTVG
Trigger: CCCGACTGTTCCTGGAAGGCAGGACAGAGACAGTGAGGTCTTGCACCAGAGAAGCCTGCCAGTTTGTGAGAGCCATGGACAACAAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CCA 90 bp CTCGGAACAGGGCGAGGCAATGTTGGTCTGTCTCCTTGTTGTCCATaGCTCTCACAAACTGGCAGGCTTCTCTGGTGCAAGACCTCACTG +
Preference number: 5 (lower is better)
Translates to: LGTGRGNVGLSPCCP*LSQTGRLLWCKTSL
Trigger: CAGTGAGGTCTTGCACCAGAGAAGCCTGCCAGTTTGTGAGAGCCATGGACAACAAGGAGACAGACCAACATTGCCTCGCCCTGTTCCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CAA 90 bp CAAGCCCTGGGAGCAACACCTTCCATCCTGAGGGAGACCAGCTCCCTGCTGAGGTCTGTGCTTGATTTCTaGCTGGAGATATGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: QALGATPSILRETSSLLRSVLDF*LEIWKV
Trigger: CACCTTCCATATCTCCAGCAAGAAATCAAGCACAGA...CCTCAGCAGGGAGCTGGTCTCCCTCAGGATGGAAGGTGTTGCTCCCAGGGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CCA 90 bp CTGTCTCCTTGTTGTCCATGGCTCTCACAAACTGGCAGGCTTCTCTaGTGCAAGACCTCACTGTCTCTGTCCTGCCTTCCAGGAACAGTC +
Preference number: 5 (lower is better)
Translates to: LSPCCPWLSQTGRLL*CKTSLSLSCLPGTV
Trigger: GACTGTTCCTGGAAGGCAGGACAGAGACAGTGAGGTCTTGCACCAGAGAAGCCTGCCAGTTTGTGAGAGCCATGGACAACAAGGAGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CAA 90 bp TGGGTGTGGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAAAGTCTGTTTCTGTGCTaGATTTCTTGCTGGAGATAT +
Preference number: 5 (lower is better)
Translates to: WVWESPIPLSAPAKPWEQSLFLC*ISCWRY
Trigger: ATATCTCCAGCAAGAAATCAAGCACAGAAACAGACT...TTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCCACACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS-3UTR CAA 90 bp GGGAATCCCCGATACCCCTGTCTGCGCCAGCCAAGCCCTGGGAGCAACACCTTCAGTCTGTTTCTGTGCTaGATTTCTTGCTGGAGATAT +
Preference number: 5 (lower is better)
Translates to: GNPRYPCLRQPSPGSNTFSLFLC*ISCWRY
Trigger: ATATCTCCAGCAAGAAATCAAGCACAGAAACAGACT...GAAGGTGTTGCTCCCAGGGCTTGGCTGGCGCAGACAGGGGTATCGGGGATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CCA 90 bp AGGCAATGTTGGTCTGTCTCCTTGTTGTCCATGGCTCTCACAAACTaGCAGGCTTCTCTGGTGCAAGACCTCACTGTCTCTGTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: RQCWSVSLLSMALTN*QASLVQDLTVSVLP
Trigger: AGGCAGGACAGAGACAGTGAGGTCTTGCACCAGAGAAGCCTGCCAGTTTGTGAGAGCCATGGACAACAAGGAGACAGACCAACATTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CCA 90 bp GTGTCGGCTGTCTTGAAGGTGACGAAGGTGGTCTTTTTCCACCCCTaGAATCCGTGTAGTGTTGAACATCCTCTCATACTGGGCGGAACA +
Preference number: 5 (lower is better)
Translates to: VSAVLKVTKVVFFHP*NPCSVEHPLILGGT
Trigger: TGTTCCGCCCAGTATGAGAGGATGTTCAACACTACACGGATTCCAGGGGTGGAAAAAGACCACCTTCGTCACCTTCAAGACAGCCGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS TCA 90 bp GGTGACGTACAGAAAATCCATCATGTAGTAGGTGCTATTAATCAGTaGGCCTCGAGAGCGCAGGTACACAAACTCTTCCCACCAGTCGCT +
Preference number: 5 (lower is better)
Translates to: GDVQKIHHVVGAINQ*ASRAQVHKLFPPVA
Trigger: AGCGACTGGTGGGAAGAGTTTGTGTACCTGCGCTCTCGAGGCTCACTGATTAATAGCACCTACTACATGATGGATTTTCTGTACGTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS TCA 90 bp GACGTACAGAAAATCCTGCATCATGTAGTAGGTGCTATTAATCAGTaGGCCTCGAGAGCGCAGGTACACAAACTCTTCCCACCAGTCGCT +
Preference number: 5 (lower is better)
Translates to: DVQKILHHVVGAINQ*ASRAQVHKLFPPVA
Trigger: AGCGACTGGTGGGAAGAGTTTGTGTACCTGCGCTCTCGAGGCTCACTGATTAATAGCACCTACTACATGATGCAGGATTTTCTGTACGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211862.2
CDS GCA 72 bp GGGCGTACAGACTCTAGGTACTTGCGCACGGTCTCCTaGGCCGAGGGCACTGGCTGTCGCGGGAGCGCGCGT +
Preference number: 6 (lower is better)
Translates to: GRTDSRYLRTVS*AEGTGCRGSAR
Trigger: ACGCGCGCTCCCGCGACAGCCAGTGCCCTCGGCGCAGGAGACCGTGCGCAAGTACCTAGAGTCTGTACGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063761.8
ENSMUST00000211862.2
ENSMUST00000212255.2
ENSMUST00000212836.2
CDS CCA 72 bp TGCGCCGAGGGCACTGGCTGTCGCGGGAGCGCGCGTTaGAAGCTGAAGAGCCTCGGGTGCCTCCCGGAAAAG +
Preference number: 6 (lower is better)
Translates to: CAEGTGCRGSAR*KLKSLGCLPEK
Trigger: CTTTTCCGGGAGGCACCCGAGGCTCTTCAGCTTCCAACGCGCGCTCCCGCGACAGCCAGTGCCCTCGGCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063761.8
ENSMUST00000211862.2
ENSMUST00000212255.2
ENSMUST00000212836.2
CDS GCA 72 bp AGCCAGCAGAGCGTGGGCATAAGCGTCCAGGGAAGCTaGGGGGTCCTCTCTGGTCAGTCCCGCGGGCTCAGA +
Preference number: 6 (lower is better)
Translates to: SQQSVGISVQGS*GVLSGQSRGLR
Trigger: TCTGAGCCCGCGGGACTGACCAGAGAGGACCCCGCAGCTTCCCTGGACGCTTATGCCCACGCTCTGCTGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CAA 90 bp TGCCGGTTCAGCAGGTGGCGATACAGGAGCAGGGTATGCACAGCATaGCCCGCGCGGGCTGCCTGCAGCGGTGTGGGGGTGACGTACAGA +
Preference number: 6 (lower is better)
Translates to: CRFSRWRYRSRVCTA*PARAACSGVGVTYR
Trigger: TCTGTACGTCACCCCCACACCGCTGCAGGCAGCCCGCGCGGGCAATGCTGTGCATACCCTGCTCCTGTATCGCCACCTGCTGAACCGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS TCA 72 bp GCGGTGGCTGCGTGGGTCTTCACCGACTCCCGCACCTaGGCCCACATACTCCTGGGAGCAGCAGTCAGAGCA +
Preference number: 6 (lower is better)
Translates to: AVAAWVFTDSRT*AHILLGAAVRA
Trigger: TGCTCTGACTGCTGCTCCCAGGAGTATGTGGGCTCAGGTGCGGGAGTCGGTGAAGACCCACGCAGCCACCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS GCA 72 bp CCCTGGCCACTCATCGCCGCCTTCAGTAGAGCCTGGTaGTTGTCCACGGCCACTCGGAACAGGGCGAGGCAA +
Preference number: 6 (lower is better)
Translates to: PWPLIAAFSRAW*LSTATRNRARQ
Trigger: TTGCCTCGCCCTGTTCCGAGTGGCCGTGGACAAGCACCAGGCTCTACTGAAGGCGGCGATGAGTGGCCAGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CCA 72 bp ATCCCCTGGCCACTCATCGCCGCCTTCAGTAGAGCCTaGTGCTTGTCCACGGCCACTCGGAACAGGGCGAGG +
Preference number: 6 (lower is better)
Translates to: IPWPLIAAFSRA*CLSTATRNRAR
Trigger: CCTCGCCCTGTTCCGAGTGGCCGTGGACAAGCACCAGGCTCTACTGAAGGCGGCGATGAGTGGCCAGGGGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS GCA 72 bp CGCGGGAGCGCGCGTTGGAAGCTGAAGAGCCTCGGGTaGCTCCCGGAAAAGATTCTGACCAATGCCAGCCAG +
Preference number: 6 (lower is better)
Translates to: RGSARWKLKSLG*LPEKILTNASQ
Trigger: CTGGCTGGCATTGGTCAGAATCTTTTCCGGGAGGCACCCGAGGCTCTTCAGCTTCCAACGCGCGCTCCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063761.8
ENSMUST00000211862.2
ENSMUST00000212255.2
ENSMUST00000212836.2
CDS GCA 72 bp CAGGAGCAGGGTATGCACAGCATTGCCCGCGCGGGCTaGCTGCAGCGGTGTGGGGGTGACGTACAGAAAATC +
Preference number: 6 (lower is better)
Translates to: QEQGMHSIARAG*LQRCGGDVQKI
Trigger: GATTTTCTGTACGTCACCCCCACACCGCTGCAGGCAGCCCGCGCGGGCAATGCTGTGCATACCCTGCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CCA 72 bp GGGCATAAGCGTCCAGGGAAGCTGCGGGGTCCTCTCTaGTCAGTCCCGCGGGCTCAGAATCGAGGGACACAA +
Preference number: 6 (lower is better)
Translates to: GHKRPGKLRGPL*SVPRAQNRGTQ
Trigger: TTGTGTCCCTCGATTCTGAGCCCGCGGGACTGACCAGAGAGGACCCCGCAGCTTCCCTGGACGCTTATGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CAA 72 bp GGGAAGACGTGGCAGTCGATGTTGCCAGACAAGGTCTaGGCTCCCCTCAGGGCCAGCGAGATGGACGGCTGG +
Preference number: 6 (lower is better)
Translates to: GKTWQSMLPDKV*APLRASEMDGW
Trigger: CCAGCCGTCCATCTCGCTGGCCCTGAGGGGAGCCAAGACCTTGTCTGGCAACATCGACTGCCACGTCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS TCA 72 bp TCCAGGGCCCGTGGGGAAAGCAGGCCATTGGGAGAGTaGGTCCCTACACGGAAGAATCTGCCCCGGTGGAAG +
Preference number: 6 (lower is better)
Translates to: SRARGESRPLGE*VPTRKNLPRWK
Trigger: CTTCCACCGGGGCAGATTCTTCCGTGTAGGGACTCACTCTCCCAATGGCCTGCTTTCCCCACGGGCCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CCA 72 bp CAGACAAGGTCTTGGCTCCCCTCAGGGCCAGCGAGATaGACGGCTGGATCTGCTCTGGAAGGTCCCACTGCA +
Preference number: 6 (lower is better)
Translates to: QTRSWLPSGPAR*TAGSALEGPTA
Trigger: TGCAGTGGGACCTTCCAGAGCAGATCCAGCCGTCCATCTCGCTGGCCCTGAGGGGAGCCAAGACCTTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CCA 72 bp GGAAGACGTGGCAGTCGATGTTGCCAGACAAGGTCTTaGCTCCCCTCAGGGCCAGCGAGATGGACGGCTGGA +
Preference number: 6 (lower is better)
Translates to: GRRGSRCCQTRS*LPSGPARWTAG
Trigger: TCCAGCCGTCCATCTCGCTGGCCCTGAGGGGAGCCAAGACCTTGTCTGGCAACATCGACTGCCACGTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CAA 72 bp CCGAAGTGGGAGAAGGGGAAGACGTGGCAGTCGATGTaGCCAGACAAGGTCTTGGCTCCCCTCAGGGCCAGC +
Preference number: 6 (lower is better)
Translates to: PKWEKGKTWQSM*PDKVLAPLRAS
Trigger: GCTGGCCCTGAGGGGAGCCAAGACCTTGTCTGGCAACATCGACTGCCACGTCTTCCCCTTCTCCCACTTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CAA 72 bp TGGCCACTCATCGCCGCCTTCAGTAGAGCCTGGTGCTaGTCCACGGCCACTCGGAACAGGGCGAGGCAATGT +
Preference number: 6 (lower is better)
Translates to: WPLIAAFSRAWC*STATRNRARQC
Trigger: ACATTGCCTCGCCCTGTTCCGAGTGGCCGTGGACAAGCACCAGGCTCTACTGAAGGCGGCGATGAGTGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CAA 90 bp TGGGAGAAGGGGAAGACGTGGCAGTCGATGTTGCCAGACAAGGTCTaGGCTCCCCTCAGGGCCAGCGAGATGGACGGCTGGATCTGCTCT +
Preference number: 6 (lower is better)
Translates to: WEKGKTWQSMLPDKV*APLRASEMDGWICS
Trigger: AGAGCAGATCCAGCCGTCCATCTCGCTGGCCCTGAGGGGAGCCAAGACCTTGTCTGGCAACATCGACTGCCACGTCTTCCCCTTCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CAA 90 bp TCAATCCCCTGGCCACTCATCGCCGCCTTCAGTAGAGCCTGGTGCTaGTCCACGGCCACTCGGAACAGGGCGAGGCAATGTTGGTCTGTC +
Preference number: 6 (lower is better)
Translates to: SIPWPLIAAFSRAWC*STATRNRARQCWSV
Trigger: GACAGACCAACATTGCCTCGCCCTGTTCCGAGTGGCCGTGGACAAGCACCAGGCTCTACTGAAGGCGGCGATGAGTGGCCAGGGGATTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CCA 72 bp CAATCAGGTGTGTCTGCTGCACAGGGACCTGGCTGGTaGACAGCAGCCATTGCTGCGACTGGACCTGGGTCA +
Preference number: 6 (lower is better)
Translates to: QSGVSAAQGPGW*TAAIAATGPGS
Trigger: TGACCCAGGTCCAGTCGCAGCAATGGCTGCTGTCCACCAGCCAGGTCCCTGTGCAGCAGACACACCTGATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CAA 90 bp AAGCTCTTGCCGAAGTGGGAGAAGGGGAAGACGTGGCAGTCGATGTaGCCAGACAAGGTCTTGGCTCCCCTCAGGGCCAGCGAGATGGAC +
Preference number: 6 (lower is better)
Translates to: KLLPKWEKGKTWQSM*PDKVLAPLRASEMD
Trigger: GTCCATCTCGCTGGCCCTGAGGGGAGCCAAGACCTTGTCTGGCAACATCGACTGCCACGTCTTCCCCTTCTCCCACTTCGGCAAGAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS GCA 72 bp GGTCGCATCCCCATCAGCAATGTCGGTGAGATCTCCTaGCGGTTCAGCAGGTGGCGATACAGGAGCAGGGTA +
Preference number: 6 (lower is better)
Translates to: GRIPISNVGEIS*RFSRWRYRSRV
Trigger: TACCCTGCTCCTGTATCGCCACCTGCTGAACCGGCAGGAGATCTCACCGACATTGCTGATGGGGATGCGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CAA 90 bp AGCCTGGTGCTTGTCCACGGCCACTCGGAACAGGGCGAGGCAATGTaGGTCTGTCTCCTTGTTGTCCATGGCTCTCACAAACTGGCAGGC +
Preference number: 6 (lower is better)
Translates to: SLVLVHGHSEQGEAM*VCLLVVHGSHKLAG
Trigger: GCCTGCCAGTTTGTGAGAGCCATGGACAACAAGGAGACAGACCAACATTGCCTCGCCCTGTTCCGAGTGGCCGTGGACAAGCACCAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS TCA 72 bp GGAACACAAGGGTCGCATCCCCATCAGCAATGTCGGTaGGATCTCCTGCCGGTTCAGCAGGTGGCGATACAG +
Preference number: 6 (lower is better)
Translates to: GTQGSHPHQQCR*DLLPVQQVAIQ
Trigger: CTGTATCGCCACCTGCTGAACCGGCAGGAGATCTCACCGACATTGCTGATGGGGATGCGACCCTTGTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CCA 72 bp TCTTCACCGACTCCCGCACCTGAGCCCACATACTCCTaGGAGCAGCAGTCAGAGCAGCTAGGTGTTCCTCAA +
Preference number: 6 (lower is better)
Translates to: SSPTPAPEPTYS*EQQSEQLGVPQ
Trigger: TTGAGGAACACCTAGCTGCTCTGACTGCTGCTCCCAGGAGTATGTGGGCTCAGGTGCGGGAGTCGGTGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CAA 90 bp ACGGCCACTCGGAACAGGGCGAGGCAATGTTGGTCTGTCTCCTTGTaGTCCATGGCTCTCACAAACTGGCAGGCTTCTCTGGTGCAAGAC +
Preference number: 6 (lower is better)
Translates to: TATRNRARQCWSVSL*SMALTNWQASLVQD
Trigger: GTCTTGCACCAGAGAAGCCTGCCAGTTTGTGAGAGCCATGGACAACAAGGAGACAGACCAACATTGCCTCGCCCTGTTCCGAGTGGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CAA 90 bp TCCACGGCCACTCGGAACAGGGCGAGGCAATGTTGGTCTGTCTCCTaGTTGTCCATGGCTCTCACAAACTGGCAGGCTTCTCTGGTGCAA +
Preference number: 6 (lower is better)
Translates to: STATRNRARQCWSVS*LSMALTNWQASLVQ
Trigger: TTGCACCAGAGAAGCCTGCCAGTTTGTGAGAGCCATGGACAACAAGGAGACAGACCAACATTGCCTCGCCCTGTTCCGAGTGGCCGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS TCA 72 bp AAAGATTCTGACCAATGCCAGCCAGGTCTTCGTGGGTaGGGACATGGCGCCATGAGGTTCCAGAAGCCAGCC +
Preference number: 6 (lower is better)
Translates to: KDSDQCQPGLRG*GHGAMRFQKPA
Trigger: GGCTGGCTTCTGGAACCTCATGGCGCCATGTCCTCACCCACGAAGACCTGGCTGGCATTGGTCAGAATCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063761.8
ENSMUST00000211862.2
ENSMUST00000212255.2
ENSMUST00000212836.2
CDS TCA 72 bp GGGCACAGAGGTAAATTTCCTGCCACACTGGCGAGCTaGGCTCTACTTCTGCCCCATCGGAACTCAGTGAAG +
Preference number: 6 (lower is better)
Translates to: GHRGKFPATLAS*ALLLPHRNSVK
Trigger: CTTCACTGAGTTCCGATGGGGCAGAAGTAGAGCTCAGCTCGCCAGTGTGGCAGGAAATTTACCTCTGTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS TCA 72 bp TCAGGAAGGGCGACTGCATATGGAGGAGCCGGGACATaGTGTACAGTGCAAAGAGGTGACGGTCAATCCCCT +
Preference number: 6 (lower is better)
Translates to: SGRATAYGGAGT*CTVQRGDGQSP
Trigger: AGGGGATTGACCGTCACCTCTTTGCACTGTACATCATGTCCCGGCTCCTCCATATGCAGTCGCCCTTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS GCA 72 bp AGGCTTCTCTGGTGCAAGACCTCACTGTCTCTGTCCTaGCTTCCAGGAACAGTCGGGTCATGGCTGACTCAT +
Preference number: 6 (lower is better)
Translates to: RLLWCKTSLSLS*LPGTVGSWLTH
Trigger: ATGAGTCAGCCATGACCCGACTGTTCCTGGAAGGCAGGACAGAGACAGTGAGGTCTTGCACCAGAGAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS GCA 72 bp TGTCCATGGCTCTCACAAACTGGCAGGCTTCTCTGGTaGAAGACCTCACTGTCTCTGTCCTGCCTTCCAGGA +
Preference number: 6 (lower is better)
Translates to: CPWLSQTGRLLW*KTSLSLSCLPG
Trigger: TCCTGGAAGGCAGGACAGAGACAGTGAGGTCTTGCACCAGAGAAGCCTGCCAGTTTGTGAGAGCCATGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CCA 72 bp GGGCGAGGCAATGTTGGTCTGTCTCCTTGTTGTCCATaGCTCTCACAAACTGGCAGGCTTCTCTGGTGCAAG +
Preference number: 6 (lower is better)
Translates to: GRGNVGLSPCCP*LSQTGRLLWCK
Trigger: CTTGCACCAGAGAAGCCTGCCAGTTTGTGAGAGCCATGGACAACAAGGAGACAGACCAACATTGCCTCGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CAA 72 bp CGGAACAGGGCGAGGCAATGTTGGTCTGTCTCCTTGTaGTCCATGGCTCTCACAAACTGGCAGGCTTCTCTG +
Preference number: 6 (lower is better)
Translates to: RNRARQCWSVSL*SMALTNWQASL
Trigger: CAGAGAAGCCTGCCAGTTTGTGAGAGCCATGGACAACAAGGAGACAGACCAACATTGCCTCGCCCTGTTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CAA 72 bp CTTGTCCACGGCCACTCGGAACAGGGCGAGGCAATGTaGGTCTGTCTCCTTGTTGTCCATGGCTCTCACAAA +
Preference number: 6 (lower is better)
Translates to: LVHGHSEQGEAM*VCLLVVHGSHK
Trigger: TTTGTGAGAGCCATGGACAACAAGGAGACAGACCAACATTGCCTCGCCCTGTTCCGAGTGGCCGTGGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CCA 72 bp TGTTGTCCATGGCTCTCACAAACTGGCAGGCTTCTCTaGTGCAAGACCTCACTGTCTCTGTCCTGCCTTCCA +
Preference number: 6 (lower is better)
Translates to: CCPWLSQTGRLL*CKTSLSLSCLP
Trigger: TGGAAGGCAGGACAGAGACAGTGAGGTCTTGCACCAGAGAAGCCTGCCAGTTTGTGAGAGCCATGGACAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CAA 72 bp ACTCGGAACAGGGCGAGGCAATGTTGGTCTGTCTCCTaGTTGTCCATGGCTCTCACAAACTGGCAGGCTTCT +
Preference number: 6 (lower is better)
Translates to: TRNRARQCWSVS*LSMALTNWQAS
Trigger: AGAAGCCTGCCAGTTTGTGAGAGCCATGGACAACAAGGAGACAGACCAACATTGCCTCGCCCTGTTCCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS TCA 72 bp GTGCTGCCCCAGCCGGTGAGAGTCTGTTTCTGTGCTTaGTTTCTTGCTGGAGATATGGAAGGTGATTGCGTT +
Preference number: 6 (lower is better)
Translates to: VLPQPVRVCFCA*FLAGDMEGDCV
Trigger: AACGCAATCACCTTCCATATCTCCAGCAAGAAATCAAGCACAGAAACAGACTCTCACCGGCTGGGGCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS TCA 72 bp TGCAGGACCAACTGGATGAAGCTGTCTGAAGAGACATaGCAGCATTTGATGAAGCTCTTGCCGAAGTGGGAG +
Preference number: 6 (lower is better)
Translates to: CRTNWMKLSEET*QHLMKLLPKWE
Trigger: CTCCCACTTCGGCAAGAGCTTCATCAAATGCTGTCATGTCTCTTCAGACAGCTTCATCCAGTTGGTCCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS CCA 72 bp GTCTTGAAGGTGACGAAGGTGGTCTTTTTCCACCCCTaGAATCCGTGTAGTGTTGAACATCCTCTCATACTG +
Preference number: 6 (lower is better)
Translates to: VLKVTKVVFFHP*NPCSVEHPLIL
Trigger: CAGTATGAGAGGATGTTCAACACTACACGGATTCCAGGGGTGGAAAAAGACCACCTTCGTCACCTTCAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS TCA 72 bp CAGAAAATCCATCATGTAGTAGGTGCTATTAATCAGTaGGCCTCGAGAGCGCAGGTACACAAACTCTTCCCA +
Preference number: 6 (lower is better)
Translates to: QKIHHVVGAINQ*ASRAQVHKLFP
Trigger: TGGGAAGAGTTTGTGTACCTGCGCTCTCGAGGCTCACTGATTAATAGCACCTACTACATGATGGATTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000063761.8
ENSMUST00000212836.2
CDS TCA 72 bp AAAATCCTGCATCATGTAGTAGGTGCTATTAATCAGTaGGCCTCGAGAGCGCAGGTACACAAACTCTTCCCA +
Preference number: 6 (lower is better)
Translates to: KILHHVVGAINQ*ASRAQVHKLFP
Trigger: TGGGAAGAGTTTGTGTACCTGCGCTCTCGAGGCTCACTGATTAATAGCACCTACTACATGATGCAGGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211862.2