Pregenerated sensors for CPT1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078937Ensembl transcript IDs: ENSMUST00000109313.9, ENSMUST00000168376.2, ENSMUST00000168879.2
Found 158 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTCCAGCGGGGGCCCTAGAGGAGCAGTATCTGCCCAGGGAGCACTaGCTCCTCCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGAACTG | + |
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Preference number: 1 (lower is better) Translates to: PPAGALEEQYLPREH*LLRGALPQELFSEL Trigger: CAGTTCGGAGAACAGCTCTTGAGGCAGTGCTCCCCGGAGGAGGCAGTGCTCCCTGGGCAGATACTGCTCCTCTAGGGCCCCCGCTGGAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| 3UTR CCA 90 bp | CTCCGAACTGGGCGTGTGTGCACGCCACCCCTTATGCCTGTGAGCTaGCCACAGGCCTCTTCTTCCACCAGGTGGGGACCAGAGGGCAGC | + |
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Preference number: 1 (lower is better) Translates to: LRTGRVCTPPLMPVS*PQASSSTRWGPEGS Trigger: GCTGCCCTCTGGTCCCCACCTGGTGGAAGAAGAGGCCTGTGGCCAGCTCACAGGCATAAGGGGTGGCGTGCACACACGCCCAGTTCGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| 3UTR GCA 90 bp | CCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGAACTGGGCGTGTGTaGACGCCACCCCTTATGCCTGTGAGCTGGCCACAGGCCTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: PGSTASRAVLRTGRV*TPPLMPVSWPQASS Trigger: AGAAGAGGCCTGTGGCCAGCTCACAGGCATAAGGGGTGGCGTGCACACACGCCCAGTTCGGAGAACAGCTCTTGAGGCAGTGCTCCCCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| 3UTR GCA 90 bp | GTCTTGTTTCTTATGGGACCCCTTCATCATGGCCTGCACAAAGGCTaGGGACTCGTTGGTACAGGAACGCACAGTCTCAGTCCGCCCCTC | + |
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Preference number: 1 (lower is better) Translates to: VLFLMGPLHHGLHKG*GLVGTGTHSLSPPL Trigger: GAGGGGCGGACTGAGACTGTGCGTTCCTGTACCAACGAGTCCGCAGCCTTTGTGCAGGCCATGATGAAGGGGTCCCATAAGAAACAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168879.2 |
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| 3UTR GCA 90 bp | AGATCTTGGAGGTCTTGTTTCTTATGGGACCCCTTCATCATGGCCTaGACAAAGGCTGCGGACTCGTTGGTACAGGAACGCACAGTCTCA | + |
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Preference number: 1 (lower is better) Translates to: RSWRSCFLWDPFIMA*TKAADSLVQERTVS Trigger: TGAGACTGTGCGTTCCTGTACCAACGAGTCCGCAGCCTTTGTGCAGGCCATGATGAAGGGGTCCCATAAGAAACAAGACCTCCAAGATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168879.2 |
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| 3UTR CCA 90 bp | TTTTCGGAGGCTTTCCGGAAGAGATCTTGGAGGTCTTGTTTCTTATaGGACCCCTTCATCATGGCCTGCACAAAGGCTGCGGACTCGTTG | + |
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Preference number: 1 (lower is better) Translates to: FSEAFRKRSWRSCFL*DPFIMACTKAADSL Trigger: CAACGAGTCCGCAGCCTTTGTGCAGGCCATGATGAAGGGGTCCCATAAGAAACAAGACCTCCAAGATCTCTTCCGGAAAGCCTCCGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168879.2 |
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| 3UTR-3UTR CCA 90 bp | ACCTCCAGCGGGGGCCCTAGAGGAGCAGTATCTGCCCAGGGAGCACTGCCTCCTAGCTGTTCTCCGAACTaGGCGTGTGTGCACGCCACC | + |
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Preference number: 2 (lower is better) Translates to: TSSGGPRGAVSAQGALPPSCSPN*ACVHAT Trigger: GGTGGCGTGCACACACGCCCAGTTCGGAGAACAGCT...AGGAGGCAGTGCTCCCTGGGCAGATACTGCTCCTCTAGGGCCCCCGCTGGAGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| 3UTR-3UTR CCA 90 bp | CACTGCCTCCTCCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGAACTGGGCGTGTCTTCTTCCACCAGGTaGGGACCAGAGGGCAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: HCLLRGALPQELFSELGVSSSTR*GPEGSW Trigger: CCAGCTGCCCTCTGGTCCCCACCTGGTGGAAGAAGA...CACGCCCAGTTCGGAGAACAGCTCTTGAGGCAGTGCTCCCCGGAGGAGGCAGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| 3UTR-3UTR GCA 90 bp | TTCCATCGCCTCCATCCTAGGCTGAGCTGGGGCAGGAAAGGGCCTTATCGTTCTAAATCAAAATTCCCCTaGTGCTCCAATCCCACCTCC | + |
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Preference number: 2 (lower is better) Translates to: FHRLHPRLSWGRKGPYRSKSKFP*CSNPTS Trigger: GGAGGTGGGATTGGAGCAGCAGGGGAATTTTGATTT...AGAACGATAAGGCCCTTTCCTGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| 3UTR-3UTR CCA 90 bp | CTCTCCAAGTCCGCATTATTCAAGAAGAGCACCCATTTCAAAGCAGGTAAGAAGCTTATGCCTGTGAGCTaGCCACAGGCCTCTTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: LSKSALFKKSTHFKAGKKLMPVS*PQASSS Trigger: GGAAGAAGAGGCCTGTGGCCAGCTCACAGGCATAAG...CTTCTTACCTGCTTTGAAATGGGTGCTCTTCTTGAATAATGCGGACTTGGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| 3UTR CCA 72 bp | GGGCGTGTGTGCACGCCACCCCTTATGCCTGTGAGCTaGCCACAGGCCTCTTCTTCCACCAGGTGGGGACCA | + |
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Preference number: 3 (lower is better) Translates to: GRVCTPPLMPVS*PQASSSTRWGP Trigger: TGGTCCCCACCTGGTGGAAGAAGAGGCCTGTGGCCAGCTCACAGGCATAAGGGGTGGCGTGCACACACGCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| 3UTR CCA 72 bp | TCCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGAACTaGGCGTGTGTGCACGCCACCCCTTATGCCTGTGAG | + |
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Preference number: 3 (lower is better) Translates to: SGEHCLKSCSPN*ACVHATPYACE Trigger: CTCACAGGCATAAGGGGTGGCGTGCACACACGCCCAGTTCGGAGAACAGCTCTTGAGGCAGTGCTCCCCGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| 3UTR GCA 72 bp | ACTGCCTCAAGAGCTGTTCTCCGAACTGGGCGTGTGTaGACGCCACCCCTTATGCCTGTGAGCTGGCCACAG | + |
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Preference number: 3 (lower is better) Translates to: TASRAVLRTGRV*TPPLMPVSWPQ Trigger: CTGTGGCCAGCTCACAGGCATAAGGGGTGGCGTGCACACACGCCCAGTTCGGAGAACAGCTCTTGAGGCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| 3UTR CCA 72 bp | CCTTCATCATGGCCTGCACAAAGGCTGCGGACTCGTTaGTACAGGAACGCACAGTCTCAGTCCGCCCCTCTC | + |
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Preference number: 3 (lower is better) Translates to: PSSWPAQRLRTR*YRNAQSQSAPL Trigger: GAGAGGGGCGGACTGAGACTGTGCGTTCCTGTACCAACGAGTCCGCAGCCTTTGTGCAGGCCATGATGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168879.2 |
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| 3UTR CCA 72 bp | TCCGACCCCTTCCATCGCCTCCATCCTAGGCTGAGCTaGGGCAGGAAAGGGCCTTATCGTTCTCTAACAAAA | + |
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Preference number: 3 (lower is better) Translates to: SDPFHRLHPRLS*GRKGPYRSLTK Trigger: TTTTGTTAGAGAACGATAAGGCCCTTTCCTGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAAGGGGTCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| 3UTR GCA 72 bp | AGGTCTTGTTTCTTATGGGACCCCTTCATCATGGCCTaGACAAAGGCTGCGGACTCGTTGGTACAGGAACGC | + |
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Preference number: 3 (lower is better) Translates to: RSCFLWDPFIMA*TKAADSLVQER Trigger: GCGTTCCTGTACCAACGAGTCCGCAGCCTTTGTGCAGGCCATGATGAAGGGGTCCCATAAGAAACAAGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168879.2 |
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| 3UTR CCA 72 bp | CTTGGAGGTCTTGTTTCTTATGGGACCCCTTCATCATaGCCTGCACAAAGGCTGCGGACTCGTTGGTACAGG | + |
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Preference number: 3 (lower is better) Translates to: LGGLVSYGTPSS*PAQRLRTRWYR Trigger: CCTGTACCAACGAGTCCGCAGCCTTTGTGCAGGCCATGATGAAGGGGTCCCATAAGAAACAAGACCTCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168879.2 |
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| 3UTR-3UTR CAA 90 bp | TTCTTATGGGACCCCTTCATCATGGCCTGCACAAAGGCTGCGGACTCGTTGGTACTGGTCCTACACTTCTaGATAAGACCTTTGCCAAAG | + |
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Preference number: 3 (lower is better) Translates to: FLWDPFIMACTKAADSLVLVLHF*IRPLPK Trigger: CTTTGGCAAAGGTCTTATCAAGAAGTGTAGGACCAG...TACCAACGAGTCCGCAGCCTTTGTGCAGGCCATGATGAAGGGGTCCCATAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168879.2 |
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| CDS-3UTR TCA 90 bp | ACCTCCAGCGGGGGCCCTAGAGGAGCAGTATCTGCCCAGGGAGCACTGCCTCCTCCCTTCCTCCTGCGGTaGGGGCTGCCAGCTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: TSSGGPRGAVSAQGALPPPFLLR*GLPASP Trigger: AGGAGAAGCTGGCAGCCCTCACCGCAGGAGGAAGGG...AGGAGGCAGTGCTCCCTGGGCAGATACTGCTCCTCTAGGGCCCCCGCTGGAGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR TCA 90 bp | GGTGCCGGTCGATCCCAGCCCCTGTCATGGCTAGGCGGTACATGTTTTGGTGCTCCCAGAGGTGCCCAATaGTGGGCGCGTCTGCCCACG | + |
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Preference number: 4 (lower is better) Translates to: GAGRSQPLSWLGGTCFGAPRGAQ*WARLPT Trigger: CGTGGGCAGACGCGCCCATCATTGGGCACCTCTGGG...AGCACCAAAACATGTACCGCCTAGCCATGACAGGGGCTGGGATCGACCGGCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168879.2 |
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| CDS-3UTR CCA 90 bp | TGCCCAGGGAGCACTGCCTCCTCCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGGAGGGGGTGGCAACGTaGTGTTTGGCTCACCCACAC | + |
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Preference number: 4 (lower is better) Translates to: CPGSTASSGEHCLKSCSPEGVAT*CLAHPH Trigger: GTGTGGGTGAGCCAAACACCACGTTGCCACCCCCTC...CGGAGAACAGCTCTTGAGGCAGTGCTCCCCGGAGGAGGCAGTGCTCCCTGGGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR GCA 90 bp | TCCGACCCCTTCCATCGCCTCCATCCTAGGCTGAGCTGGGGCAGGAAAGGGCCTGGTCTGACGTGCCTCTaGCCACTCTACCCTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: SDPFHRLHPRLSWGRKGPGLTCL*PLYPSS Trigger: GGAGGAAGGGTAGAGTGGGCAGAGGCACGTCAGACC...AGGCCCTTTCCTGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAAGGGGTCGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CCA 90 bp | CCAGGGAGCACTGCCTCCTCCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGAACCCGGTGAATTGTGGCTaGCACGCTGGGGACAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: PGSTASSGEHCLKSCSPNPVNCG*HAGDRK Trigger: CTTCCTGTCCCCAGCGTGCCAGCCACAATTCACCGG...GTTCGGAGAACAGCTCTTGAGGCAGTGCTCCCCGGAGGAGGCAGTGCTCCCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR TCA 90 bp | TTCCATCGCCTCCATCCTAGGCTGAGCTGGGGCAGGAAAGGGCCTTATCGTTCTCCCAGAGGTGCCCAATaGTGGGCGCGTCTGCCCACG | + |
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Preference number: 4 (lower is better) Translates to: FHRLHPRLSWGRKGPYRSPRGAQ*WARLPT Trigger: CGTGGGCAGACGCGCCCATCATTGGGCACCTCTGGG...AGAACGATAAGGCCCTTTCCTGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR GCA 90 bp | TGCCCAGGGAGCACTGCCTCCTCCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGGGAGGCATCTCTGGATaGAATCGACCAGTCCCATGG | + |
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Preference number: 4 (lower is better) Translates to: CPGSTASSGEHCLKSCSPGGISG*NRPVPW Trigger: CCATGGGACTGGTCGATTGCATCCAGAGATGCCTCC...CGGAGAACAGCTCTTGAGGCAGTGCTCCCCGGAGGAGGCAGTGCTCCCTGGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CCA 90 bp | GCCTCCTCCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGAACTGGGCGTGTGTGTCCGGGAGGCATCTCTaGATGCAATCGACCAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: ASSGEHCLKSCSPNWACVSGRHL*MQSTSP Trigger: GGGACTGGTCGATTGCATCCAGAGATGCCTCCCGGA...CACACACGCCCAGTTCGGAGAACAGCTCTTGAGGCAGTGCTCCCCGGAGGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CCA 90 bp | CCCTTCCATCGCCTCCATCCTAGGCTGAGCTGGGGCAGGAAAGGGCCTTATCGTGGAAGCTGTAGAGCATaGGCCGCCGGCTGGACAGGA | + |
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Preference number: 4 (lower is better) Translates to: PFHRLHPRLSWGRKGPYRGSCRA*AAGWTG Trigger: TCCTGTCCAGCCGGCGGCCCATGCTCTACAGCTTCC...ACGATAAGGCCCTTTCCTGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CCA 90 bp | CCCTTCCATCGCCTCCATCCTAGGCTGAGCTGGGGCAGGAAAGGGCCTTATCGTCTCCCCAGGCTGAGGTaGGGAAGGGTCGTCGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: PFHRLHPRLSWGRKGPYRLPRLR*GRVVED Trigger: ATCCTCGACGACCCTTCCCCACCTCAGCCTGGGGAG...ACGATAAGGCCCTTTCCTGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR TCA 90 bp | ACCTCCAGCGGGGGCCCTAGAGGAGCAGTATCTGCCCAGGGAGCACTGCCTCCTAACCAACTGTTGCCATaGCAACAACCAGCCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: TSSGGPRGAVSAQGALPPNQLLP*QQPASW Trigger: CCAGCTGGCTGGTTGTTGTCATGGCAACAGTTGGTT...AGGAGGCAGTGCTCCCTGGGCAGATACTGCTCCTCTAGGGCCCCCGCTGGAGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR GCA 90 bp | TCCGACCCCTTCCATCGCCTCCATCCTAGGCTGAGCTGGGGCAGGAAAGGGCCTTGGCTGGTCTTGCTGTaGATCTCGAACATCCACCCG | + |
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Preference number: 4 (lower is better) Translates to: SDPFHRLHPRLSWGRKGPWLVLL*ISNIHP Trigger: CGGGTGGATGTTCGAGATGCACAGCAAGACCAGCCA...AGGCCCTTTCCTGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAAGGGGTCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR GCA 90 bp | TCCGACCCCTTCCATCGCCTCCATCCTAGGCTGAGCTGGGGCAGGAAAGGGCCTAGCACCAGGTATTTCTaGAGCCTGGGGGCAGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: SDPFHRLHPRLSWGRKGPSTRYF*SLGAVL Trigger: CAAGACTGCCCCCAGGCTGCAGAAATACCTGGTGCT...AGGCCCTTTCCTGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAAGGGGTCGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR GCA 90 bp | CACTGCCTCCTCCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGAACTGGGCGTGAGACAGCCACGTGCCTaGTCTCTGAGAGGTGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: HCLLRGALPQELFSELGVRQPRA*SLRGAV Trigger: TACAGCACCTCTCAGAGAGCAGGCACGTGGCTGTCT...CACGCCCAGTTCGGAGAACAGCTCTTGAGGCAGTGCTCCCCGGAGGAGGCAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR GCA 90 bp | CCAGGGAGCACTGCCTCCTCCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGAACACAAACTCCCAGAGGTaGCCAATGATGGGCGCGTCT | + |
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Preference number: 4 (lower is better) Translates to: PGSTASSGEHCLKSCSPNTNSQR*PMMGAS Trigger: AGACGCGCCCATCATTGGGCACCTCTGGGAGTTTGT...GTTCGGAGAACAGCTCTTGAGGCAGTGCTCCCCGGAGGAGGCAGTGCTCCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CCA 90 bp | CCAGGGAGCACTGCCTCCTCCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGAACGAAGTCGACCCCGTCTaGGGTCACAGTGAACTGGAA | + |
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Preference number: 4 (lower is better) Translates to: PGSTASSGEHCLKSCSPNEVDPV*GHSELE Trigger: TTCCAGTTCACTGTGACCCCAGACGGGGTCGACTTC...GTTCGGAGAACAGCTCTTGAGGCAGTGCTCCCCGGAGGAGGCAGTGCTCCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CCA 90 bp | CCAGGGAGCACTGCCTCCTCCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGAACTCTGGTAGGAGCACATaGGCACCATACCCAGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: PGSTASSGEHCLKSCSPNSGRST*APYPVP Trigger: TGGCACTGGGTATGGTGCCCATGTGCTCCTACCAGA...GTTCGGAGAACAGCTCTTGAGGCAGTGCTCCCCGGAGGAGGCAGTGCTCCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CCA 90 bp | CCCTTCCATCGCCTCCATCCTAGGCTGAGCTGGGGCAGGAAAGGGCCTTATCGTGGGACCCCTTCATCATaGCCTGCACAAAGGCTGCGG | + |
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Preference number: 4 (lower is better) Translates to: PFHRLHPRLSWGRKGPYRGTPSS*PAQRLR Trigger: CCGCAGCCTTTGTGCAGGCCATGATGAAGGGGTCCC...ACGATAAGGCCCTTTCCTGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CCA 90 bp | CACTGCCTCCTCCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGAACTGGGCGTGATGCAGATCTGGAACTaGGGGATCTGGCTGGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: HCLLRGALPQELFSELGVMQIWN*GIWLVE Trigger: CTCCACCAGCCAGATCCCCCAGTTCCAGATCTGCAT...CACGCCCAGTTCGGAGAACAGCTCTTGAGGCAGTGCTCCCCGGAGGAGGCAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CCA 90 bp | CCCTTCCATCGCCTCCATCCTAGGCTGAGCTGGGGCAGGAAAGGGCCTTATCGTAGTGCTTGGCGGATGTaGTTCCCAAAGCGCTGGGCG | + |
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Preference number: 4 (lower is better) Translates to: PFHRLHPRLSWGRKGPYRSAWRM*FPKRWA Trigger: CGCCCAGCGCTTTGGGAACCACATCCGCCAAGCACT...ACGATAAGGCCCTTTCCTGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR GCA 90 bp | TGCCCAGGGAGCACTGCCTCCTCCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGGGTGAAAGGTATCAGTaGCCAGGACAAACTCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: CPGSTASSGEHCLKSCSPGERYQ*PGQTPR Trigger: TCTGGGAGTTTGTCCTGGGCACTGATACCTTTCACC...CGGAGAACAGCTCTTGAGGCAGTGCTCCCCGGAGGAGGCAGTGCTCCCTGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CCA 90 bp | TCCGACCCCTTCCATCGCCTCCATCCTAGGCTGAGCTGGGGCAGGAAAGGGCCTCAGATCTTGGTGGCATaGCTGGTCTTGCTGTGCATC | + |
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Preference number: 4 (lower is better) Translates to: SDPFHRLHPRLSWGRKGPQILVA*LVLLCI Trigger: GATGCACAGCAAGACCAGCCATGCCACCAAGATCTG...AGGCCCTTTCCTGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAAGGGGTCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CCA 90 bp | TGCCCAGGGAGCACTGCCTCCTCCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGTGTCCTGGAATTCCTTaGCCAATGTCTCCATGCGGT | + |
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Preference number: 4 (lower is better) Translates to: CPGSTASSGEHCLKSCSPCPGIP*PMSPCG Trigger: ACCGCATGGAGACATTGGCCAAGGAATTCCAGGACA...CGGAGAACAGCTCTTGAGGCAGTGCTCCCCGGAGGAGGCAGTGCTCCCTGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CCA 90 bp | CACTGCCTCCTCCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGAACTGGGCGTGGGGGCAGTCTTGTCCTaGAATTCCTTGGCCAATGTC | + |
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Preference number: 4 (lower is better) Translates to: HCLLRGALPQELFSELGVGAVLS*NSLANV Trigger: GACATTGGCCAAGGAATTCCAGGACAAGACTGCCCC...CACGCCCAGTTCGGAGAACAGCTCTTGAGGCAGTGCTCCCCGGAGGAGGCAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| 3UTR CAA 72 bp | CCCTTCATCATGGCCTGCACAAAGGCTGCGGACTCGTaGGTACAGGAACGCACAGTCTCAGTCCGCCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: PFIMACTKAADS*VQERTVSVRPS Trigger: AGAGGGGCGGACTGAGACTGTGCGTTCCTGTACCAACGAGTCCGCAGCCTTTGTGCAGGCCATGATGAAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168879.2 |
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| CDS-3UTR TCA 90 bp | TGCCTCCTCCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGAACTGGGCGTGTGTTGTTCTTGCCAGAGCTaGAGAAGGTCTGACGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: CLLRGALPQELFSELGVCCSCQS*RRSDVP Trigger: AGGCACGTCAGACCTTCTTCAGCTCTGGCAAGAACA...ACACACGCCCAGTTCGGAGAACAGCTCTTGAGGCAGTGCTCCCCGGAGGAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR GCA 90 bp | CCTTCATCATGGCCTGCACAAAGGCTGCGGACTCGTTGGTACAGGAACGCACAGGGTCTGACGTGCCTCTaGCCACTCTACCCTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: PSSWPAQRLRTRWYRNAQGLTCL*PLYPSS Trigger: GGAGGAAGGGTAGAGTGGGCAGAGGCACGTCAGACC...CTGTGCGTTCCTGTACCAACGAGTCCGCAGCCTTTGTGCAGGCCATGATGAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168879.2 |
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| CDS-3UTR GCA 90 bp | TGCCCAGGGAGCACTGCCTCCTCCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGACCTGTTATAGCAGTTaGCATGGAGCAAGGCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: CPGSTASSGEHCLKSCSPTCYSS*HGARLC Trigger: GCAAAGCCTTGCTCCATGGCAACTGCTATAACAGGT...CGGAGAACAGCTCTTGAGGCAGTGCTCCCCGGAGGAGGCAGTGCTCCCTGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CCA 90 bp | TTCCATCGCCTCCATCCTAGGCTGAGCTGGGGCAGGAAAGGGCCTTATCGTTCTCAACAACCAGCCAGCTaGTGGGGCTGCCAGGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: FHRLHPRLSWGRKGPYRSQQPAS*WGCQGT Trigger: TGTACCCTGGCAGCCCCACCAGCTGGCTGGTTGTTG...AGAACGATAAGGCCCTTTCCTGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CCA 90 bp | TGCCTCCTCCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGAACTGGGCGTGTGTTCCCAGCCCCTGTCATaGCTAGGCGGTACATGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CLLRGALPQELFSELGVCSQPLS*LGGTCF Trigger: AAAACATGTACCGCCTAGCCATGACAGGGGCTGGGA...ACACACGCCCAGTTCGGAGAACAGCTCTTGAGGCAGTGCTCCCCGGAGGAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CCA 90 bp | TTCCATCGCCTCCATCCTAGGCTGAGCTGGGGCAGGAAAGGGCCTTATCGTTCTTGGAACTGGGGGATCTaGCTGGTGGAGAGGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FHRLHPRLSWGRKGPYRSWNWGI*LVERLQ Trigger: CTGGAGCCTCTCCACCAGCCAGATCCCCCAGTTCCA...AGAACGATAAGGCCCTTTCCTGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CCA 90 bp | TCCGACCCCTTCCATCGCCTCCATCCTAGGCTGAGCTGGGGCAGGAAAGGGCCTATGTCCAACAGTGCTTaGCGGATGTGGTTCCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SDPFHRLHPRLSWGRKGPMSNSA*RMWFPK Trigger: CTTTGGGAACCACATCCGCCAAGCACTGTTGGACAT...AGGCCCTTTCCTGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAAGGGGTCGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR TCA 90 bp | CACTGCCTCCTCCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGAACTGGGCGTGGTTAGTTGCCCACCATaGCTTGAGCACCAGGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: HCLLRGALPQELFSELGVVSCPP*LEHQVF Trigger: AAATACCTGGTGCTCAAGTCATGGTGGGCAACTAAC...CACGCCCAGTTCGGAGAACAGCTCTTGAGGCAGTGCTCCCCGGAGGAGGCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR TCA 90 bp | GGCGGTACATGTTTTGGTGCTTTTCGGAGGCTTTCCGGAAGAGATCTTGGAGGTCCCTTCCTCCTGCGGTaGGGGCTGCCAGCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GGTCFGAFRRLSGRDLGGPFLLR*GLPASP Trigger: AGGAGAAGCTGGCAGCCCTCACCGCAGGAGGAAGGG...ACCTCCAAGATCTCTTCCGGAAAGCCTCCGAAAAGCACCAAAACATGTACCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168879.2 |
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| CDS-3UTR GCA 90 bp | TTCCATCGCCTCCATCCTAGGCTGAGCTGGGGCAGGAAAGGGCCTTATCGTTCTGAAGAAGGTCTGACGTaGCTCTGCCCACTCTACCCT | + |
|
Preference number: 4 (lower is better) Translates to: FHRLHPRLSWGRKGPYRSEEGLT*LCPLYP Trigger: AGGGTAGAGTGGGCAGAGGCACGTCAGACCTTCTTC...AGAACGATAAGGCCCTTTCCTGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR GCA 90 bp | TGCCTCCTCCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGAACTGGGCGTGTGTGTTTTGGGTCAAACATaGAGATCTGGAACTGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CLLRGALPQELFSELGVCVLGQT*RSGTGG Trigger: TCCCCCAGTTCCAGATCTGCATGTTTGACCCAAAAC...ACACACGCCCAGTTCGGAGAACAGCTCTTGAGGCAGTGCTCCCCGGAGGAGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
||
| CDS-3UTR CCA 90 bp | TTCCATCGCCTCCATCCTAGGCTGAGCTGGGGCAGGAAAGGGCCTTATCGTTCTGGTATTTCTGCAGCCTaGGGGCAGTCTTGTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FHRLHPRLSWGRKGPYRSGISAA*GQSCPG Trigger: TCCAGGACAAGACTGCCCCCAGGCTGCAGAAATACC...AGAACGATAAGGCCCTTTCCTGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CCA 90 bp | GCCTCCTCCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGAACTGGGCGTGTGTGCAGCACCCAGATGATTaGGATACTGTTTTGGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ASSGEHCLKSCSPNWACVQHPDD*DTVLGQ Trigger: TTGACCCAAAACAGTATCCCAATCATCTGGGTGCTG...CACACACGCCCAGTTCGGAGAACAGCTCTTGAGGCAGTGCTCCCCGGAGGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
||
| CDS-3UTR GCA 90 bp | TTCCATCGCCTCCATCCTAGGCTGAGCTGGGGCAGGAAAGGGCCTTATCGTTCTTGGCATGGCTGGTCTTaGTGTGCATCTCGAACATCC | + |
|
Preference number: 4 (lower is better) Translates to: FHRLHPRLSWGRKGPYRSWHGWS*CASRTS Trigger: GGATGTTCGAGATGCACAGCAAGACCAGCCATGCCA...AGAACGATAAGGCCCTTTCCTGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
||
| CDS-3UTR GCA 90 bp | GCCTGCACAAAGGCTGCGGACTCGTTGGTACAGGAACGCACAGTCTCAGTCCGCACCTGTTATAGCAGTTaGCATGGAGCAAGGCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ACTKAADSLVQERTVSVRTCYSS*HGARLC Trigger: GCAAAGCCTTGCTCCATGGCAACTGCTATAACAGGT...GCGGACTGAGACTGTGCGTTCCTGTACCAACGAGTCCGCAGCCTTTGTGCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168879.2 |
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| CDS-3UTR GCA 90 bp | CCCTTCCATCGCCTCCATCCTAGGCTGAGCTGGGGCAGGAAAGGGCCTTATCGTAAGTCAGGCAGAACTTaGCTTTGTCCCGGAAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: PFHRLHPRLSWGRKGPYRKSGRT*LCPGNE Trigger: CTCATTTCCGGGACAAAGGCAAGTTCTGCCTGACTT...ACGATAAGGCCCTTTCCTGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
||
| CDS-3UTR CCA 90 bp | CCCTTCCATCGCCTCCATCCTAGGCTGAGCTGGGGCAGGAAAGGGCCTTATCGTGTCTGTCTCTTTGCCTaGGATGCGTGTAGTGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PFHRLHPRLSWGRKGPYRVCLFA*DACSVE Trigger: TTCAACACTACACGCATCCCAGGCAAAGAGACAGAC...ACGATAAGGCCCTTTCCTGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CCA 90 bp | ACCTCCAGCGGGGGCCCTAGAGGAGCAGTATCTGCCCAGGGAGCACTGCCTCCTATTGGGATACTGTTTTaGGTCAAACATGCAGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: TSSGGPRGAVSAQGALPPIGILF*VKHADL Trigger: CAGATCTGCATGTTTGACCCAAAACAGTATCCCAAT...AGGAGGCAGTGCTCCCTGGGCAGATACTGCTCCTCTAGGGCCCCCGCTGGAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CCA 90 bp | CACTGCCTCCTCCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGAACTGGGCGTGAGATGTGGAAGAACATaGTGTTTTCTCCTGCGATCA | + |
|
Preference number: 4 (lower is better) Translates to: HCLLRGALPQELFSELGVRCGRT*CFLLRS Trigger: TGATCGCAGGAGAAAACACCATGTTCTTCCACATCT...CACGCCCAGTTCGGAGAACAGCTCTTGAGGCAGTGCTCCCCGGAGGAGGCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR TCA 90 bp | CCCTTCCATCGCCTCCATCCTAGGCTGAGCTGGGGCAGGAAAGGGCCTTATCGTGTTTCTTCCAGGAGTTaGTTCCAGACAGGTAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: PFHRLHPRLSWGRKGPYRVSSRS*FQTGRC Trigger: ACATCTACCTGTCTGGAATCAACTCCTGGAAGAAAC...ACGATAAGGCCCTTTCCTGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
||
| CDS-3UTR TCA 90 bp | TTCCATCGCCTCCATCCTAGGCTGAGCTGGGGCAGGAAAGGGCCTTATCGTTCTTTGCCCACCATGACTTaGGCACCAGGTATTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FHRLHPRLSWGRKGPYRSLPTMT*APGISA Trigger: TGCAGAAATACCTGGTGCTCAAGTCATGGTGGGCAA...AGAACGATAAGGCCCTTTCCTGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR GCA 90 bp | TTCCATCGCCTCCATCCTAGGCTGAGCTGGGGCAGGAAAGGGCCTTATCGTTCTCTGCTCTCTGAGAGGTaGTGTAGCAAGTCTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FHRLHPRLSWGRKGPYRSLLSER*CSKSVS Trigger: AGAGACAGACTTGCTACAGCACCTCTCAGAGAGCAG...AGAACGATAAGGCCCTTTCCTGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
||
| CDS-3UTR CCA 90 bp | TTCGGAGGCTTTCCGGAAGAGATCTTGGAGGTCTTGTTTCTTATGGGACCCCTTGAGGGGGTGGCAACGTaGTGTTTGGCTCACCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: FGGFPEEILEVLFLMGPLEGVAT*CLAHPH Trigger: GTGTGGGTGAGCCAAACACCACGTTGCCACCCCCTC...AAGGGGTCCCATAAGAAACAAGACCTCCAAGATCTCTTCCGGAAAGCCTCCGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168879.2 |
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| CDS-3UTR TCA 90 bp | TCAGGCAGAACTTGCCTTTGTCCCGGAAATGAGCCAGCTGTAGGGCAATCTGCATGTTCTTGCCAGAGCTaGAGAAGGTCTGACGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SGRTCLCPGNEPAVGQSACSCQS*RRSDVP Trigger: AGGCACGTCAGACCTTCTTCAGCTCTGGCAAGAACA...TGCAGATTGCCCTACAGCTGGCTCATTTCCGGGACAAAGGCAAGTTCTGCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168879.2 |
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| CDS-3UTR GCA 90 bp | GGTACATGTTTTGGTGCTTTTCGGAGGCTTTCCGGAAGAGATCTTGGAGGTCTTCTCTACCCTTCCTCCTaGGGTGAGGGCTGCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GTCFGAFRRLSGRDLGGLLYPSS*GEGCQL Trigger: AAGCTGGCAGCCCTCACCGCAGGAGGAAGGGTAGAG...AAGACCTCCAAGATCTCTTCCGGAAAGCCTCCGAAAAGCACCAAAACATGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168879.2 |
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| CDS-3UTR GCA 90 bp | CTTTCCGGAAGAGATCTTGGAGGTCTTGTTTCTTATGGGACCCCTTCATCATGGGTGTCCTCCCAGAGGTaGCCAATGATGGGCGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSGRDLGGLVSYGTPSSWVSSQR*PMMGAS Trigger: AGACGCGCCCATCATTGGGCACCTCTGGGAGGACAC...CCATGATGAAGGGGTCCCATAAGAAACAAGACCTCCAAGATCTCTTCCGGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168879.2 |
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| CDS-3UTR CCA 90 bp | CGCTCTCCAAGTCCGCATTATTCAAGAAGAGCACCCATTTCAAAGCAGGTAAGAGGGGGATCTGGCTGGTaGAGAGGCTCCAGGGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSPSPHYSRRAPISKQVRGGSGW*RGSRVQ Trigger: CTGAACCCTGGAGCCTCTCCACCAGCCAGATCCCCC...TCTTACCTGCTTTGAAATGGGTGCTCTTCTTGAATAATGCGGACTTGGAGAGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CCA 90 bp | TGCCTCCTCCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGAACTGGGCGTGTGTAACTTGAGTATTTGCTaGAGATGTGGAAGAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: CLLRGALPQELFSELGVCNLSIC*RCGRTW Trigger: CCATGTTCTTCCACATCTCCAGCAAATACTCAAGTT...ACACACGCCCAGTTCGGAGAACAGCTCTTGAGGCAGTGCTCCCCGGAGGAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR GCA 90 bp | ATCTGCACAAAAGCGTCGGGGCTGGTCCTACACTTCTTGATAAGACCTTTGCCAGAAGAAGGTCTGACGTaGCTCTGCCCACTCTACCCT | + |
|
Preference number: 4 (lower is better) Translates to: ICTKASGLVLHFLIRPLPEEGLT*LCPLYP Trigger: AGGGTAGAGTGGGCAGAGGCACGTCAGACCTTCTTC...TGGCAAAGGTCTTATCAAGAAGTGTAGGACCAGCCCCGACGCTTTTGTGCAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168879.2 |
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| CDS-3UTR GCA 90 bp | TTCCATCGCCTCCATCCTAGGCTGAGCTGGGGCAGGAAAGGGCCTTATCGTTCTCCTAGACGGGCTGCTTaGACATTTGTGTTCTTAATA | + |
|
Preference number: 4 (lower is better) Translates to: FHRLHPRLSWGRKGPYRSPRRAA*TFVFLI Trigger: TATTAAGAACACAAATGTGCAAGCAGCCCGTCTAGG...AGAACGATAAGGCCCTTTCCTGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR GCA 90 bp | CTCTCCAAGTCCGCATTATTCAAGAAGAGCACCCATTTCAAAGCAGGTAAGAAGCTCTACCCTTCCTCCTaGGGTGAGGGCTGCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSKSALFKKSTHFKAGKKLYPSS*GEGCQL Trigger: AAGCTGGCAGCCCTCACCGCAGGAGGAAGGGTAGAG...CTTCTTACCTGCTTTGAAATGGGTGCTCTTCTTGAATAATGCGGACTTGGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR GCA 90 bp | CGCTCTCCAAGTCCGCATTATTCAAGAAGAGCACCCATTTCAAAGCAGGTAAGACCCTTCATCATGGCCTaGACAAAGGCTGCGGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: RSPSPHYSRRAPISKQVRPFIMA*TKAADS Trigger: CGAGTCCGCAGCCTTTGTGCAGGCCATGATGAAGGG...TCTTACCTGCTTTGAAATGGGTGCTCTTCTTGAATAATGCGGACTTGGAGAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CCA 90 bp | TTCCATCGCCTCCATCCTAGGCTGAGCTGGGGCAGGAAAGGGCCTTATCGTTCTTTCCGGAAGAGATCTTaGAGGTCTTGTTTCTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: FHRLHPRLSWGRKGPYRSFRKRS*RSCFLW Trigger: CCATAAGAAACAAGACCTCCAAGATCTCTTCCGGAA...AGAACGATAAGGCCCTTTCCTGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CCA 90 bp | CTCTCCAAGTCCGCATTATTCAAGAAGAGCACCCATTTCAAAGCAGGTAAGAAGACTGGGGGATCTGGCTaGTGGAGAGGCTCCAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSKSALFKKSTHFKAGKKTGGSG*WRGSRV Trigger: AACCCTGGAGCCTCTCCACCAGCCAGATCCCCCAGT...CTTCTTACCTGCTTTGAAATGGGTGCTCTTCTTGAATAATGCGGACTTGGAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR TCA 90 bp | CGCTCTCCAAGTCCGCATTATTCAAGAAGAGCACCCATTTCAAAGCAGGTAAGACGTCTGGGGTCACAGTaGACTGGAAAGCTACTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSPSPHYSRRAPISKQVRRLGSQ*TGKLLP Trigger: AGGCAGTAGCTTTCCAGTTCACTGTGACCCCAGACG...TCTTACCTGCTTTGAAATGGGTGCTCTTCTTGAATAATGCGGACTTGGAGAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CCA 90 bp | CTCTCCAAGTCCGCATTATTCAAGAAGAGCACCCATTTCAAAGCAGGTAAGAAGAGTACCGGTGAATTGTaGCTGGCACGCTGGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: LSKSALFKKSTHFKAGKKSTGEL*LARWGQ Trigger: CTGTCCCCAGCGTGCCAGCCACAATTCACCGGTACT...CTTCTTACCTGCTTTGAAATGGGTGCTCTTCTTGAATAATGCGGACTTGGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR TCA 90 bp | CGCTCTCCAAGTCCGCATTATTCAAGAAGAGCACCCATTTCAAAGCAGGTAAGAGTTTGCGGCGATACATaGTCATGGCGTGAACGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RSPSPHYSRRAPISKQVRVCGDT*SWRERH Trigger: ATGCCGTTCACGCCATGATCATGTATCGCCGCAAAC...TCTTACCTGCTTTGAAATGGGTGCTCTTCTTGAATAATGCGGACTTGGAGAGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR GCA 90 bp | CGCTCTCCAAGTCCGCATTATTCAAGAAGAGCACCCATTTCAAAGCAGGTAAGAGAACTGGAAAGCTACTaGCTGGTGTGCTTCCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RSPSPHYSRRAPISKQVRELESY*LVCFRH Trigger: ATGGCGGAAGCACACCAGGCAGTAGCTTTCCAGTTC...TCTTACCTGCTTTGAAATGGGTGCTCTTCTTGAATAATGCGGACTTGGAGAGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CCA 90 bp | CGCTCTCCAAGTCCGCATTATTCAAGAAGAGCACCCATTTCAAAGCAGGTAAGAAAGTGCCTCTGTCTGTaGGGTCCCAAAGTGGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: RSPSPHYSRRAPISKQVRKCLCL*GPKVAI Trigger: TATGGCCACTTTGGGACCCCACAGACAGAGGCACTT...TCTTACCTGCTTTGAAATGGGTGCTCTTCTTGAATAATGCGGACTTGGAGAGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CCA 90 bp | CTCTCCAAGTCCGCATTATTCAAGAAGAGCACCCATTTCAAAGCAGGTAAGAAGAGGCTGCGGACTCGTTaGTACAGGAACGCACAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSKSALFKKSTHFKAGKKRLRTR*YRNAQS Trigger: AGACTGTGCGTTCCTGTACCAACGAGTCCGCAGCCT...CTTCTTACCTGCTTTGAAATGGGTGCTCTTCTTGAATAATGCGGACTTGGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR TCA 90 bp | CGCTCTCCAAGTCCGCATTATTCAAGAAGAGCACCCATTTCAAAGCAGGTAAGAAGGAAGCTTAGGCAGTaGCGTTTGGAAGCTGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RSPSPHYSRRAPISKQVRRKLRQ*RLEAVE Trigger: CTCTACAGCTTCCAAACGTCACTGCCTAAGCTTCCT...TCTTACCTGCTTTGAAATGGGTGCTCTTCTTGAATAATGCGGACTTGGAGAGCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
||
| CDS-3UTR CCA 90 bp | CGCTCTCCAAGTCCGCATTATTCAAGAAGAGCACCCATTTCAAAGCAGGTAAGATCGTCGAGGATTCTCTaGAACTGCATCTCCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSPSPHYSRRAPISKQVRSSRIL*NCISRS Trigger: AGACCTGGAGATGCAGTTCCAGAGAATCCTCGACGA...TCTTACCTGCTTTGAAATGGGTGCTCTTCTTGAATAATGCGGACTTGGAGAGCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
||
| CDS-3UTR TCA 90 bp | CTCTCCAAGTCCGCATTATTCAAGAAGAGCACCCATTTCAAAGCAGGTAAGAAGCTGTCTTGGAAATTTTaGAAAGTTCGGCGATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSKSALFKKSTHFKAGKKLSWKF*KVRRCP Trigger: TGGACATCGCCGAACTTTTCAAAATTTCCAAGACAG...CTTCTTACCTGCTTTGAAATGGGTGCTCTTCTTGAATAATGCGGACTTGGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
||
| CDS CCA 90 bp | TTCCCGGCACTGCTCGGGAATGTCCCACGGCAGCCGCTGAGGGGGTaGCAACGTGGTGTTTGGCTCACCCACACAGTGTCCTGTCTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: FPALLGNVPRQPLRG*QRGVWLTHTVSCLR Trigger: ACGGAGACAGGACACTGTGTGGGTGAGCCAAACACCACGTTGCCACCCCCTCAGCGGCTGCCGTGGGACATTCCCGAGCAGTGCCGGGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
||
| CDS CCA 90 bp | GGGAATGTCCCACGGCAGCCGCTGAGGGGGTGGCAACGTGGTGTTTaGCTCACCCACACAGTGTCCTCCCAGAGGTGCCCAATGATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GNVPRQPLRGWQRGV*LTHTVSSQRCPMMG Trigger: GCCCATCATTGGGCACCTCTGGGAGGACACTGTGTGGGTGAGCCAAACACCACGTTGCCACCCCCTCAGCGGCTGCCGTGGGACATTCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168879.2 |
||
| CDS CCA 90 bp | ACTGCTCGGGAATGTCCCACGGCAGCCGCTGAGGGGGTGGCAACGTaGTGTTTGGCTCACCCACACAGTGTCCTGTCTCCGTGTAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TARECPTAAAEGVAT*CLAHPHSVLSPCSP Trigger: TGGGCTACACGGAGACAGGACACTGTGTGGGTGAGCCAAACACCACGTTGCCACCCCCTCAGCGGCTGCCGTGGGACATTCCCGAGCAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
||
| CDS CCA 90 bp | ACTGCTCGGGAATGTCCCACGGCAGCCGCTGAGGGGGTGGCAACGTaGTGTTTGGCTCACCCACACAGTGTCCTCCCAGAGGTGCCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: TARECPTAAAEGVAT*CLAHPHSVLPEVPN Trigger: ATTGGGCACCTCTGGGAGGACACTGTGTGGGTGAGCCAAACACCACGTTGCCACCCCCTCAGCGGCTGCCGTGGGACATTCCCGAGCAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168879.2 |
||
| CDS-3UTR CAA 90 bp | GCCTCCTCCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGAACTGGGCGTGTGTGAGCCTGGGGGCAGTCTaGTCCTGGAATTCCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ASSGEHCLKSCSPNWACVSLGAV*SWNSLA Trigger: GGCCAAGGAATTCCAGGACAAGACTGCCCCCAGGCT...CACACACGCCCAGTTCGGAGAACAGCTCTTGAGGCAGTGCTCCCCGGAGGAGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
||
| CDS TCA 90 bp | CCGGTGAATTGTGGCTGGCACGCTGGGGACAGGAAGCTTAGGCAGTaGCGTTTGGAAGCTGTAGAGCATGGGCCGCCGGCTGGACAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PVNCGWHAGDRKLRQ*RLEAVEHGPPAGQE Trigger: CTCCTGTCCAGCCGGCGGCCCATGCTCTACAGCTTCCAAACGTCACTGCCTAAGCTTCCTGTCCCCAGCGTGCCAGCCACAATTCACCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
||
| CDS CCA 90 bp | GGGAATGTCCCACGGCAGCCGCTGAGGGGGTGGCAACGTGGTGTTTaGCTCACCCACACAGTGTCCTGTCTCCGTGTAGCCCAGGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GNVPRQPLRGWQRGV*LTHTVSCLRVAQVK Trigger: TTTCACCTGGGCTACACGGAGACAGGACACTGTGTGGGTGAGCCAAACACCACGTTGCCACCCCCTCAGCGGCTGCCGTGGGACATTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CAA 90 bp | TCCGACCCCTTCCATCGCCTCCATCCTAGGCTGAGCTGGGGCAGGAAAGGGCCTGTGGCAACGTGGTGTTaGGCTCACCCACACAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SDPFHRLHPRLSWGRKGPVATWC*AHPHSV Trigger: GACACTGTGTGGGTGAGCCAAACACCACGTTGCCAC...AGGCCCTTTCCTGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAAGGGGTCGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
||
| CDS-3UTR CAA 90 bp | TCCGACCCCTTCCATCGCCTCCATCCTAGGCTGAGCTGGGGCAGGAAAGGGCCTAAGGCTGCGGACTCGTaGGTACAGGAACGCACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SDPFHRLHPRLSWGRKGPKAADS*VQERTV Trigger: GACTGTGCGTTCCTGTACCAACGAGTCCGCAGCCTT...AGGCCCTTTCCTGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAAGGGGTCGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS GCA 90 bp | TGGCAACGTGGTGTTTGGCTCACCCACACAGTGTCCTCCCAGAGGTaGCCAATGATGGGCGCGTCTGCCCACGAGTGTTCGGTGTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WQRGVWLTHTVSSQR*PMMGASAHECSVLR Trigger: CCTCAACACCGAACACTCGTGGGCAGACGCGCCCATCATTGGGCACCTCTGGGAGGACACTGTGTGGGTGAGCCAAACACCACGTTGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168879.2 |
||
| CDS-3UTR CAA 90 bp | CACTGCCTCCTCCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGAACTGGGCGTGAGTGCCATGACCGGCTaGATCTCTTCACGGTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: HCLLRGALPQELFSELGVSAMTG*ISSRSS Trigger: ACTGGACCGTGAAGAGATCAAGCCGGTCATGGCACT...CACGCCCAGTTCGGAGAACAGCTCTTGAGGCAGTGCTCCCCGGAGGAGGCAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CAA 90 bp | ACCTCCAGCGGGGGCCCTAGAGGAGCAGTATCTGCCCAGGGAGCACTGCCTCCTGATGTCCAACAGTGCTaGGCGGATGTGGTTCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TSSGGPRGAVSAQGALPPDVQQC*ADVVPK Trigger: TTTGGGAACCACATCCGCCAAGCACTGTTGGACATC...AGGAGGCAGTGCTCCCTGGGCAGATACTGCTCCTCTAGGGCCCCCGCTGGAGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
||
| CDS GCA 90 bp | GCCTGTCGCCCAGACTCCGGTGGAGAAGATGACCATGCTGAGAAGTaGCTCTGTCTGTGGGGTCCCAAAGTGGCCATACCTTTCCGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ACRPDSGGEDDHAEK*LCLWGPKVAIPFRE Trigger: CTCCCGGAAAGGTATGGCCACTTTGGGACCCCACAGACAGAGGCACTTCTCAGCATGGTCATCTTCTCCACCGGAGTCTGGGCGACAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
||
| CDS-3UTR CAA 90 bp | TGCCTCCTCCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGAACTGGGCGTGTGTCAGATAGCCCAGATCTaGGTGGCATGGCTGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CLLRGALPQELFSELGVCQIAQI*VAWLVL Trigger: CAAGACCAGCCATGCCACCAAGATCTGGGCTATCTG...ACACACGCCCAGTTCGGAGAACAGCTCTTGAGGCAGTGCTCCCCGGAGGAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
||
| CDS-3UTR CAA 90 bp | TCCGACCCCTTCCATCGCCTCCATCCTAGGCTGAGCTGGGGCAGGAAAGGGCCTTTGTCCTGGAATTCCTaGGCCAATGTCTCCATGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SDPFHRLHPRLSWGRKGPLSWNS*ANVSMR Trigger: CCGCATGGAGACATTGGCCAAGGAATTCCAGGACAA...AGGCCCTTTCCTGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAAGGGGTCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
||
| CDS-3UTR CAA 90 bp | CACTGCCTCCTCCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGAACTGGGCGTGAGCAAGTCTGTCTCTTaGCCTGGGATGCGTGTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: HCLLRGALPQELFSELGVSKSVS*PGMRVV Trigger: CACTACACGCATCCCAGGCAAAGAGACAGACTTGCT...CACGCCCAGTTCGGAGAACAGCTCTTGAGGCAGTGCTCCCCGGAGGAGGCAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
||
| CDS-3UTR CAA 90 bp | CACTGCCTCCTCCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGAACTGGGCGTGGCGTCCAGAGACATCTaGTTCTTGCCAGAGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HCLLRGALPQELFSELGVASRDI*FLPELK Trigger: CTTCAGCTCTGGCAAGAACAAGATGTCTCTGGACGC...CACGCCCAGTTCGGAGAACAGCTCTTGAGGCAGTGCTCCCCGGAGGAGGCAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
||
| CDS-3UTR CAA 90 bp | CCCTTCCATCGCCTCCATCCTAGGCTGAGCTGGGGCAGGAAAGGGCCTTATCGTTCATCGGCCAGTGCCTaGGCTACTTGGTACGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PFHRLHPRLSWGRKGPYRSSASA*ATWYEF Trigger: GAACTCGTACCAAGTAGCCAAGGCACTGGCCGATGA...ACGATAAGGCCCTTTCCTGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
||
| CDS-3UTR CAA 90 bp | TGCCCAGGGAGCACTGCCTCCTCCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGGAGATCTTGGAGGTCTaGTTTCTTATGGGACCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: CPGSTASSGEHCLKSCSPEILEV*FLMGPL Trigger: AAGGGGTCCCATAAGAAACAAGACCTCCAAGATCTC...CGGAGAACAGCTCTTGAGGCAGTGCTCCCCGGAGGAGGCAGTGCTCCCTGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS TCA 90 bp | CCATGGAGATGTCCACCTTGCAGTAGTTGGAACCAACTGTTGCCATaGCAACAACCAGCCAGCTGGTGGGGCTGCCAGGGTACACACCCC | + |
|
Preference number: 5 (lower is better) Translates to: PWRCPPCSSWNQLLP*QQPASWWGCQGTHP Trigger: GGGGTGTGTACCCTGGCAGCCCCACCAGCTGGCTGGTTGTTGTCATGGCAACAGTTGGTTCCAACTACTGCAAGGTGGACATCTCCATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS CCA 90 bp | GTAAGAACTGGAAGCAGTAGAGCTCCACGTCATCGGCCAGTGCCTTaGCTACTTGGTACGAGTTCTCGATGGCTTCCCGGCACTGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: VRTGSSRAPRHRPVP*LLGTSSRWLPGTAR Trigger: CCGAGCAGTGCCGGGAAGCCATCGAGAACTCGTACCAAGTAGCCAAGGCACTGGCCGATGACGTGGAGCTCTACTGCTTCCAGTTCTTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
||
| CDS-3UTR CAA 90 bp | GGCCTGCACAAAGGCTGCGGACTCGTTGGTACAGGAACGCACAGTCTCAGTCCGGCGTCCAGAGACATCTaGTTCTTGCCAGAGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GLHKGCGLVGTGTHSLSPASRDI*FLPELK Trigger: CTTCAGCTCTGGCAAGAACAAGATGTCTCTGGACGC...CGGACTGAGACTGTGCGTTCCTGTACCAACGAGTCCGCAGCCTTTGTGCAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168879.2 |
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| CDS-3UTR CAA 90 bp | ACCTCCAGCGGGGGCCCTAGAGGAGCAGTATCTGCCCAGGGAGCACTGCCTCCTCGTTCGTCTCTGAACTaGAGTATTTGCTGGAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: TSSGGPRGAVSAQGALPPRSSLN*SICWRC Trigger: ACATCTCCAGCAAATACTCAAGTTCAGAGACGAACG...AGGAGGCAGTGCTCCCTGGGCAGATACTGCTCCTCTAGGGCCCCCGCTGGAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
||
| CDS TCA 90 bp | CAGCACGTTCGATGGCGTCCAGAGACATCTTGTTCTTGCCAGAGCTaGAGAAGGTCTGACGTGCCTCTGCCCACTCTACCCTTCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QHVRWRPETSCSCQS*RRSDVPLPTLPFLL Trigger: CAGGAGGAAGGGTAGAGTGGGCAGAGGCACGTCAGACCTTCTTCAGCTCTGGCAAGAACAAGATGTCTCTGGACGCCATCGAACGTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109313.9 ENSMUST00000168879.2 |
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| CDS GCA 90 bp | CAGTCCCATGGAGATGTCCACCTTGCAGTAGTTGGAACCAACTGTTaGCATGACAACAACCAGCCAGCTGGTGGGGCTGCCAGGGTACAC | + |
|
Preference number: 5 (lower is better) Translates to: QSHGDVHLAVVGTNC*HDNNQPAGGAARVH Trigger: GTGTACCCTGGCAGCCCCACCAGCTGGCTGGTTGTTGTCATGGCAACAGTTGGTTCCAACTACTGCAAGGTGGACATCTCCATGGGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS GCA 90 bp | GTGGGGTCCCAAAGTGGCCATACCTTTCCGGGAGGCATCTCTGGATaGAATCGACCAGTCCCATGGAGATGTCCACCTTGCAGTAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VGSQSGHTFPGGISG*NRPVPWRCPPCSSW Trigger: CCAACTACTGCAAGGTGGACATCTCCATGGGACTGGTCGATTGCATCCAGAGATGCCTCCCGGAAAGGTATGGCCACTTTGGGACCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS CCA 90 bp | GACTCCGGTGGAGAAGATGACCATGCTGAGAAGTGCCTCTGTCTGTaGGGTCCCAAAGTGGCCATACCTTTCCGGGAGGCATCTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: DSGGEDDHAEKCLCL*GPKVAIPFREASLD Trigger: ATCCAGAGATGCCTCCCGGAAAGGTATGGCCACTTTGGGACCCCACAGACAGAGGCACTTCTCAGCATGGTCATCTTCTCCACCGGAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
||
| CDS-3UTR CAA 90 bp | GCCTCCTCCGGGGAGCACTGCCTCAAGAGCTGTTCTCCGAACTGGGCGTGTGTGTCTGAACTTGAGTATTaGCTGGAGATGTGGAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ASSGEHCLKSCSPNWACVSELEY*LEMWKN Trigger: GTTCTTCCACATCTCCAGCAAATACTCAAGTTCAGA...CACACACGCCCAGTTCGGAGAACAGCTCTTGAGGCAGTGCTCCCCGGAGGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS CCA 90 bp | GTTTTGGGTCAAACATGCAGATCTGGAACTGGGGGATCTGGCTGGTaGAGAGGCTCCAGGGTTCAGAAAGTACCTCAGCCAGGAAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VLGQTCRSGTGGSGW*RGSRVQKVPQPGKE Trigger: CTCCTTTCCTGGCTGAGGTACTTTCTGAACCCTGGAGCCTCTCCACCAGCCAGATCCCCCAGTTCCAGATCTGCATGTTTGACCCAAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS CCA 90 bp | ACTGTTTTGGGTCAAACATGCAGATCTGGAACTGGGGGATCTGGCTaGTGGAGAGGCTCCAGGGTTCAGAAAGTACCTCAGCCAGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TVLGQTCRSGTGGSG*WRGSRVQKVPQPGK Trigger: CTTTCCTGGCTGAGGTACTTTCTGAACCCTGGAGCCTCTCCACCAGCCAGATCCCCCAGTTCCAGATCTGCATGTTTGACCCAAAACAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CAA 90 bp | TTCCATCGCCTCCATCCTAGGCTGAGCTGGGGCAGGAAAGGGCCTTATCGTTCTCCTAACAGGCCATTCTaGCAGGAGATAAGGGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: FHRLHPRLSWGRKGPYRSPNRPF*QEIRVK Trigger: TTTCACCCTTATCTCCTGCAAGAATGGCCTGTTAGG...AGAACGATAAGGCCCTTTCCTGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CAA 90 bp | CCTTCATCATGGCCTGCACAAAGGCTGCGGACTCGTTGGTACAGGAACGCACAGCCTAACAGGCCATTCTaGCAGGAGATAAGGGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PSSWPAQRLRTRWYRNAQPNRPF*QEIRVK Trigger: TTTCACCCTTATCTCCTGCAAGAATGGCCTGTTAGG...CTGTGCGTTCCTGTACCAACGAGTCCGCAGCCTTTGTGCAGGCCATGATGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168879.2 |
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| CDS-3UTR CAA 90 bp | TGGCTAGGCGGTACATGTTTTGGTGCTTTTCGGAGGCTTTCCGGAAGAGATCTTGTGGCAACGTGGTGTTaGGCTCACCCACACAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: WLGGTCFGAFRRLSGRDLVATWC*AHPHSV Trigger: GACACTGTGTGGGTGAGCCAAACACCACGTTGCCAC...AAGATCTCTTCCGGAAAGCCTCCGAAAAGCACCAAAACATGTACCGCCTAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168879.2 |
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| CDS TCA 90 bp | GACATATTCTTCCCACCAGTCACTCACATAGTTAGTTGCCCACCATaGCTTGAGCACCAGGTATTTCTGCAGCCTGGGGGCAGTCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: DIFFPPVTHIVSCPP*LEHQVFLQPGGSLV Trigger: GACAAGACTGCCCCCAGGCTGCAGAAATACCTGGTGCTCAAGTCATGGTGGGCAACTAACTATGTGAGTGACTGGTGGGAAGAATATGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CAA 90 bp | TTCCATCGCCTCCATCCTAGGCTGAGCTGGGGCAGGAAAGGGCCTTATCGTTCTTCTGTCTTGGAAATTTaGAAAAGTTCGGCGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: FHRLHPRLSWGRKGPYRSSVLEI*KSSAMS Trigger: GGACATCGCCGAACTTTTCAAAATTTCCAAGACAGA...AGAACGATAAGGCCCTTTCCTGCCCCAGCTCAGCCTAGGATGGAGGCGATGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS CCA 90 bp | CCAGGTATTTCTGCAGCCTGGGGGCAGTCTTGTCCTGGAATTCCTTaGCCAATGTCTCCATGCGGTAATATGCTTCATCATCCAATAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PGISAAWGQSCPGIP*PMSPCGNMLHHPIR Trigger: CCTTATTGGATGATGAAGCATATTACCGCATGGAGACATTGGCCAAGGAATTCCAGGACAAGACTGCCCCCAGGCTGCAGAAATACCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS CCA 90 bp | TCTGTCTTGGAAATTTTGAAAAGTTCGGCGATGTCCAACAGTGCTTaGCGGATGTGGTTCCCAAAGCGCTGGGCGTTCGTCTCTGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: SVLEILKSSAMSNSA*RMWFPKRWAFVSEL Trigger: AAGTTCAGAGACGAACGCCCAGCGCTTTGGGAACCACATCCGCCAAGCACTGTTGGACATCGCCGAACTTTTCAAAATTTCCAAGACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS CCA 90 bp | GAAATTTTGAAAAGTTCGGCGATGTCCAACAGTGCTTGGCGGATGTaGTTCCCAAAGCGCTGGGCGTTCGTCTCTGAACTTGAGTATTTG | + |
|
Preference number: 5 (lower is better) Translates to: EILKSSAMSNSAWRM*FPKRWAFVSELEYL Trigger: CAAATACTCAAGTTCAGAGACGAACGCCCAGCGCTTTGGGAACCACATCCGCCAAGCACTGTTGGACATCGCCGAACTTTTCAAAATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CAA 90 bp | CGCTCTCCAAGTCCGCATTATTCAAGAAGAGCACCCATTTCAAAGCAGGTAAGACAGCAGCTTCAGGGTTaGTCGGAAGAAGAAAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSPSPHYSRRAPISKQVRQQLQG*SEEENA Trigger: GGCATTTTCTTCTTCCGACAAACCCTGAAGCTGCTG...TCTTACCTGCTTTGAAATGGGTGCTCTTCTTGAATAATGCGGACTTGGAGAGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CAA 90 bp | CTCTCCAAGTCCGCATTATTCAAGAAGAGCACCCATTTCAAAGCAGGTAAGAAGGTTGCCCACCATGACTaGAGCACCAGGTATTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSKSALFKKSTHFKAGKKVAHHD*STRYFC Trigger: GCAGAAATACCTGGTGCTCAAGTCATGGTGGGCAAC...CTTCTTACCTGCTTTGAAATGGGTGCTCTTCTTGAATAATGCGGACTTGGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CAA 90 bp | CGCTCTCCAAGTCCGCATTATTCAAGAAGAGCACCCATTTCAAAGCAGGTAAGATCTTCACGGTCCAGTTaGCGGCGATACATGATCATG | + |
|
Preference number: 5 (lower is better) Translates to: RSPSPHYSRRAPISKQVRSSRSS*RRYMIM Trigger: CATGATCATGTATCGCCGCAAACTGGACCGTGAAGA...TCTTACCTGCTTTGAAATGGGTGCTCTTCTTGAATAATGCGGACTTGGAGAGCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CAA 90 bp | CTCTCCAAGTCCGCATTATTCAAGAAGAGCACCCATTTCAAAGCAGGTAAGAAGGGGATGCGTGTAGTGTaGAACATCCTCTCCATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSKSALFKKSTHFKAGKKGMRVV*NILSIW Trigger: CCAGATGGAGAGGATGTTCAACACTACACGCATCCC...CTTCTTACCTGCTTTGAAATGGGTGCTCTTCTTGAATAATGCGGACTTGGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS-3UTR CAA 90 bp | CTCTCCAAGTCCGCATTATTCAAGAAGAGCACCCATTTCAAAGCAGGTAAGAAGCTGGTCCTACACTTCTaGATAAGACCTTTGCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSKSALFKKSTHFKAGKKLVLHF*IRPLPK Trigger: CTTTGGCAAAGGTCTTATCAAGAAGTGTAGGACCAG...CTTCTTACCTGCTTTGAAATGGGTGCTCTTCTTGAATAATGCGGACTTGGAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS CAA 72 bp | CCCACGGCAGCCGCTGAGGGGGTGGCAACGTGGTGTTaGGCTCACCCACACAGTGTCCTCCCAGAGGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PTAAAEGVATWC*AHPHSVLPEVP Trigger: GGGCACCTCTGGGAGGACACTGTGTGGGTGAGCCAAACACCACGTTGCCACCCCCTCAGCGGCTGCCGTGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168879.2 |
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| CDS CCA 72 bp | CCACGGCAGCCGCTGAGGGGGTGGCAACGTGGTGTTTaGCTCACCCACACAGTGTCCTGTCTCCGTGTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PRQPLRGWQRGV*LTHTVSCLRVA Trigger: GGCTACACGGAGACAGGACACTGTGTGGGTGAGCCAAACACCACGTTGCCACCCCCTCAGCGGCTGCCGTGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
||
| CDS CCA 72 bp | GAATGTCCCACGGCAGCCGCTGAGGGGGTGGCAACGTaGTGTTTGGCTCACCCACACAGTGTCCTCCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ECPTAAAEGVAT*CLAHPHSVLPE Trigger: CTCTGGGAGGACACTGTGTGGGTGAGCCAAACACCACGTTGCCACCCCCTCAGCGGCTGCCGTGGGACATTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168879.2 |
||
| CDS TCA 72 bp | TGTGGCTGGCACGCTGGGGACAGGAAGCTTAGGCAGTaGCGTTTGGAAGCTGTAGAGCATGGGCCGCCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CGWHAGDRKLRQ*RLEAVEHGPPA Trigger: AGCCGGCGGCCCATGCTCTACAGCTTCCAAACGTCACTGCCTAAGCTTCCTGTCCCCAGCGTGCCAGCCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
||
| CDS CCA 72 bp | CAGAGCCTCCCGACTAAGCCGGAAGTCGACCCCGTCTaGGGTCACAGTGAACTGGAAAGCTACTGCCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: QSLPTKPEVDPV*GHSELESYCLV Trigger: CACCAGGCAGTAGCTTTCCAGTTCACTGTGACCCCAGACGGGGTCGACTTCCGGCTTAGTCGGGAGGCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109313.9 ENSMUST00000168376.2 |
||
| CDS CAA 90 bp | CTGGAAGCAGTAGAGCTCCACGTCATCGGCCAGTGCCTTGGCTACTaGGTACGAGTTCTCGATGGCTTCCCGGCACTGCTCGGGAATGTC | + |
|
Preference number: 6 (lower is better) Translates to: LEAVELHVIGQCLGY*VRVLDGFPALLGNV Trigger: GACATTCCCGAGCAGTGCCGGGAAGCCATCGAGAACTCGTACCAAGTAGCCAAGGCACTGGCCGATGACGTGGAGCTCTACTGCTTCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
||
| CDS TCA 72 bp | CGATGGCGTCCAGAGACATCTTGTTCTTGCCAGAGCTaGAGAAGGTCTGACGTGCCTCTGCCCACTCTACCC | + |
|
Preference number: 6 (lower is better) Translates to: RWRPETSCSCQS*RRSDVPLPTLP Trigger: GGGTAGAGTGGGCAGAGGCACGTCAGACCTTCTTCAGCTCTGGCAAGAACAAGATGTCTCTGGACGCCATCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109313.9 ENSMUST00000168879.2 |
||
| CDS GCA 72 bp | GGAGATGTCCACCTTGCAGTAGTTGGAACCAACTGTTaGCATGACAACAACCAGCCAGCTGGTGGGGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GDVHLAVVGTNC*HDNNQPAGGAA Trigger: GGCAGCCCCACCAGCTGGCTGGTTGTTGTCATGGCAACAGTTGGTTCCAACTACTGCAAGGTGGACATCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
||
| CDS CCA 72 bp | GTCCCAAAGTGGCCATACCTTTCCGGGAGGCATCTCTaGATGCAATCGACCAGTCCCATGGAGATGTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: VPKWPYLSGRHL*MQSTSPMEMST Trigger: GGTGGACATCTCCATGGGACTGGTCGATTGCATCCAGAGATGCCTCCCGGAAAGGTATGGCCACTTTGGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
||
| CDS CCA 72 bp | GGAGAAGATGACCATGCTGAGAAGTGCCTCTGTCTGTaGGGTCCCAAAGTGGCCATACCTTTCCGGGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GEDDHAEKCLCL*GPKVAIPFREA Trigger: TGCCTCCCGGAAAGGTATGGCCACTTTGGGACCCCACAGACAGAGGCACTTCTCAGCATGGTCATCTTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
||
| CDS CAA 90 bp | CAGAGGTGCCCAATGATGGGCGCGTCTGCCCACGAGTGTTCGGTGTaGAGGCCTAACAGGCCATTCTTGCAGGAGATAAGGGTGAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: QRCPMMGASAHECSV*RPNRPFLQEIRVKD Trigger: ATCTTTCACCCTTATCTCCTGCAAGAATGGCCTGTTAGGCCTCAACACCGAACACTCGTGGGCAGACGCGCCCATCATTGGGCACCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109313.9 ENSMUST00000168879.2 |
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| CDS TCA 72 bp | AGAGACATCTTGTTCTTGCCAGAGCTGAAGAAGGTCTaGCGTGCCTCTGCCCACTCTACCCTTCCTCCTGCG | + |
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Preference number: 6 (lower is better) Translates to: RDILFLPELKKV*RASAHSTLPPA Trigger: CGCAGGAGGAAGGGTAGAGTGGGCAGAGGCACGTCAGACCTTCTTCAGCTCTGGCAAGAACAAGATGTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109313.9 ENSMUST00000168879.2 |
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| CDS GCA 72 bp | CAAAGTGGCCATACCTTTCCGGGAGGCATCTCTGGATaGAATCGACCAGTCCCATGGAGATGTCCACCTTGC | + |
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Preference number: 6 (lower is better) Translates to: QSGHTFPGGISG*NRPVPWRCPPC Trigger: GCAAGGTGGACATCTCCATGGGACTGGTCGATTGCATCCAGAGATGCCTCCCGGAAAGGTATGGCCACTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS GCA 72 bp | GAACTGGAAGCAGTAGAGCTCCACGTCATCGGCCAGTaGCTTGGCTACTTGGTACGAGTTCTCGATGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: ELEAVELHVIGQ*LGYLVRVLDGF Trigger: GAAGCCATCGAGAACTCGTACCAAGTAGCCAAGGCACTGGCCGATGACGTGGAGCTCTACTGCTTCCAGTTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS CCA 72 bp | ATGCTGAGAAGTGCCTCTGTCTGTGGGGTCCCAAAGTaGCCATACCTTTCCGGGAGGCATCTCTGGATGCAA | + |
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Preference number: 6 (lower is better) Translates to: MLRSASVCGVPK*PYLSGRHLWMQ Trigger: TTGCATCCAGAGATGCCTCCCGGAAAGGTATGGCCACTTTGGGACCCCACAGACAGAGGCACTTCTCAGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS CCA 72 bp | GGTCAAACATGCAGATCTGGAACTGGGGGATCTGGCTaGTGGAGAGGCTCCAGGGTTCAGAAAGTACCTCAG | + |
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Preference number: 6 (lower is better) Translates to: GQTCRSGTGGSG*WRGSRVQKVPQ Trigger: CTGAGGTACTTTCTGAACCCTGGAGCCTCTCCACCAGCCAGATCCCCCAGTTCCAGATCTGCATGTTTGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS CAA 72 bp | TTGAGCACCAGGTATTTCTGCAGCCTGGGGGCAGTCTaGTCCTGGAATTCCTTGGCCAATGTCTCCATGCGG | + |
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Preference number: 6 (lower is better) Translates to: LSTRYFCSLGAV*SWNSLANVSMR Trigger: CCGCATGGAGACATTGGCCAAGGAATTCCAGGACAAGACTGCCCCCAGGCTGCAGAAATACCTGGTGCTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS TCA 72 bp | TCATCCAATAAGGGCCGCACAGAATCCAAGTACCGGTaGATTGTGGCTGGCACGCTGGGGACAGGAAGCTTA | + |
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Preference number: 6 (lower is better) Translates to: SSNKGRTESKYR*IVAGTLGTGSL Trigger: TAAGCTTCCTGTCCCCAGCGTGCCAGCCACAATTCACCGGTACTTGGATTCTGTGCGGCCCTTATTGGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS TCA 72 bp | TTCCCACCAGTCACTCACATAGTTAGTTGCCCACCATaGCTTGAGCACCAGGTATTTCTGCAGCCTGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: FPPVTHIVSCPP*LEHQVFLQPGG Trigger: GCCCCCAGGCTGCAGAAATACCTGGTGCTCAAGTCATGGTGGGCAACTAACTATGTGAGTGACTGGTGGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS TCA 72 bp | TCACGGTCCAGTTTGCGGCGATACATGATCATGGCGTaGACGGCATTGCCTAGACGGGCTGCTTGCACATTT | + |
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Preference number: 6 (lower is better) Translates to: SRSSLRRYMIMA*TALPRRAACTF Trigger: AAATGTGCAAGCAGCCCGTCTAGGCAATGCCGTTCACGCCATGATCATGTATCGCCGCAAACTGGACCGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS CCA 72 bp | TTTGGGTCAAACATGCAGATCTGGAACTGGGGGATCTaGCTGGTGGAGAGGCTCCAGGGTTCAGAAAGTACC | + |
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Preference number: 6 (lower is better) Translates to: FGSNMQIWNWGI*LVERLQGSEST Trigger: GGTACTTTCTGAACCCTGGAGCCTCTCCACCAGCCAGATCCCCCAGTTCCAGATCTGCATGTTTGACCCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS CCA 72 bp | GGATACTGTTTTGGGTCAAACATGCAGATCTGGAACTaGGGGATCTGGCTGGTGGAGAGGCTCCAGGGTTCA | + |
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Preference number: 6 (lower is better) Translates to: GYCFGSNMQIWN*GIWLVERLQGS Trigger: TGAACCCTGGAGCCTCTCCACCAGCCAGATCCCCCAGTTCCAGATCTGCATGTTTGACCCAAAACAGTATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS CCA 72 bp | TCCAACAGTGCTTGGCGGATGTGGTTCCCAAAGCGCTaGGCGTTCGTCTCTGAACTTGAGTATTTGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: SNSAWRMWFPKR*AFVSELEYLLE Trigger: CTCCAGCAAATACTCAAGTTCAGAGACGAACGCCCAGCGCTTTGGGAACCACATCCGCCAAGCACTGTTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS GCA 72 bp | TTAGTTGCCCACCATGACTTGAGCACCAGGTATTTCTaGAGCCTGGGGGCAGTCTTGTCCTGGAATTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: LVAHHDLSTRYF*SLGAVLSWNSL Trigger: CAAGGAATTCCAGGACAAGACTGCCCCCAGGCTGCAGAAATACCTGGTGCTCAAGTCATGGTGGGCAACTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS CCA 72 bp | GCCACCTCCAGCACCCAGATGATTGGGATACTGTTTTaGGTCAAACATGCAGATCTGGAACTGGGGGATCTG | + |
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Preference number: 6 (lower is better) Translates to: ATSSTQMIGILF*VKHADLELGDL Trigger: CAGATCCCCCAGTTCCAGATCTGCATGTTTGACCCAAAACAGTATCCCAATCATCTGGGTGCTGGAGGTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS CCA 72 bp | GAAATTTTGAAAAGTTCGGCGATGTCCAACAGTGCTTaGCGGATGTGGTTCCCAAAGCGCTGGGCGTTCGTC | + |
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Preference number: 6 (lower is better) Translates to: EILKSSAMSNSA*RMWFPKRWAFV Trigger: GACGAACGCCCAGCGCTTTGGGAACCACATCCGCCAAGCACTGTTGGACATCGCCGAACTTTTCAAAATTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS GCA 72 bp | CTTGGAAATTTTGAAAAGTTCGGCGATGTCCAACAGTaGTTGGCGGATGTGGTTCCCAAAGCGCTGGGCGTT | + |
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Preference number: 6 (lower is better) Translates to: LGNFEKFGDVQQ*LADVVPKALGV Trigger: AACGCCCAGCGCTTTGGGAACCACATCCGCCAAGCACTGTTGGACATCGCCGAACTTTTCAAAATTTCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS CCA 72 bp | TCTGCAGCCTGGGGGCAGTCTTGTCCTGGAATTCCTTaGCCAATGTCTCCATGCGGTAATATGCTTCATCAT | + |
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Preference number: 6 (lower is better) Translates to: SAAWGQSCPGIP*PMSPCGNMLHH Trigger: ATGATGAAGCATATTACCGCATGGAGACATTGGCCAAGGAATTCCAGGACAAGACTGCCCCCAGGCTGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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| CDS CAA 72 bp | CCAAAGCGCTGGGCGTTCGTCTCTGAACTTGAGTATTaGCTGGAGATGTGGAAGAACATGGTGTTTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: PKRWAFVSELEY*LEMWKNMVFSP Trigger: AGGAGAAAACACCATGTTCTTCCACATCTCCAGCAAATACTCAAGTTCAGAGACGAACGCCCAGCGCTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109313.9 |
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