Pregenerated sensors for CPT1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024900Ensembl transcript IDs: ENSMUST00000025835.6, ENSMUST00000237562.2, ENSMUST00000237938.2, ENSMUST00000238015.2
Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCTCTATGGCCCCACTTGCCAATGGGCTCCCATCGTTAAGGCACTaGGTTTCGAAGGTGGCACTGAGGAGGTGGTATCCTGCTTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: FSMAPLANGLPSLRH*VSKVALRRWYPASR Trigger: CCTGGAAGCAGGATACCACCTCCTCAGTGCCACCTTCGAAACCCAGTGCCTTAACGATGGGAGCCCATTGGCAAGTGGGGCCATAGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR CCA 90 bp | CAAAGGCTTCACATGCTAAGCCTTCTCTATGGCCCCACTTGCCAATaGGCTCCCATCGTTAAGGCACTGGGTTTCGAAGGTGGCACTGAG | + |
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Preference number: 1 (lower is better) Translates to: QRLHMLSLLYGPTCQ*APIVKALGFEGGTE Trigger: CTCAGTGCCACCTTCGAAACCCAGTGCCTTAACGATGGGAGCCCATTGGCAAGTGGGGCCATAGAGAAGGCTTAGCATGTGAAGCCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR CCA 90 bp | GAGATTCTGCATCGCTCCCTCCACCAGGGACCTCATCTTCTAGGGTaGGGGAAGTGCTTACTTAGGGACATCTCTATGCAGGAACTTGTG | + |
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Preference number: 1 (lower is better) Translates to: EILHRSLHQGPHLLG*GKCLLRDISMQELV Trigger: CACAAGTTCCTGCATAGAGATGTCCCTAAGTAAGCACTTCCCCCACCCTAGAAGATGAGGTCCCTGGTGGAGGGAGCGATGCAGAATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR TCA 90 bp | CAATGGCTGCCACACTCTCCAGCTGGTGTCCAACTTGGTAGCCTTTaGCTACCAAGCCCCTCACTTCCCTCTGTGGACACATCTGTTATT | + |
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Preference number: 1 (lower is better) Translates to: QWLPHSPAGVQLGSL*LPSPSLPSVDTSVI Trigger: AATAACAGATGTGTCCACAGAGGGAAGTGAGGGGCTTGGTAGTCAAAGGCTACCAAGTTGGACACCAGCTGGAGAGTGTGGCAGCCATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR GCA 90 bp | GTTAAGGCACTGGGTTTCGAAGGTGGCACTGAGGAGGTGGTATCCTaGTTCCAGGAAATGTGGAGTCAAATGTGGACTCCCAAAGCGATG | + |
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Preference number: 1 (lower is better) Translates to: VKALGFEGGTEEVVS*FQEMWSQMWTPKAM Trigger: CATCGCTTTGGGAGTCCACATTTGACTCCACATTTCCTGGAAGCAGGATACCACCTCCTCAGTGCCACCTTCGAAACCCAGTGCCTTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR CCA 90 bp | TTCGAAGGTGGCACTGAGGAGGTGGTATCCTGCTTCCAGGAAATGTaGAGTCAAATGTGGACTCCCAAAGCGATGGTGGCTGTCATTCAT | + |
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Preference number: 1 (lower is better) Translates to: FEGGTEEVVSCFQEM*SQMWTPKAMVAVIH Trigger: ATGAATGACAGCCACCATCGCTTTGGGAGTCCACATTTGACTCCACATTTCCTGGAAGCAGGATACCACCTCCTCAGTGCCACCTTCGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR GCA 90 bp | TACCAAGCCCCTCACTTCCCTCTGTGGACACATCTGTTATTTTGTTaGTTAATGGAACTGGTGGCCAATGAGATTCTGCATCGCTCCCTC | + |
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Preference number: 1 (lower is better) Translates to: YQAPHFPLWTHLLFC*LMELVANEILHRSL Trigger: GAGGGAGCGATGCAGAATCTCATTGGCCACCAGTTCCATTAAGCAACAAAATAACAGATGTGTCCACAGAGGGAAGTGAGGGGCTTGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR CCA 90 bp | ACTGAGGAGGTGGTATCCTGCTTCCAGGAAATGTGGAGTCAAATGTaGACTCCCAAAGCGATGGTGGCTGTCATTCATAGCAGAACCTTA | + |
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Preference number: 1 (lower is better) Translates to: TEEVVSCFQEMWSQM*TPKAMVAVIHSRTL Trigger: TAAGGTTCTGCTATGAATGACAGCCACCATCGCTTTGGGAGTCCACATTTGACTCCACATTTCCTGGAAGCAGGATACCACCTCCTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR CCA 90 bp | TATTGGATGTTGTCAAGAAAGGCACTCTCACAGAGGGATGGTATTTaGGTACAAAGCACCCATTACTTGAGACCCCCGAGTCTGTCACCA | + |
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Preference number: 1 (lower is better) Translates to: YWMLSRKALSQRDGI*VQSTHYLRPPSLSP Trigger: TGGTGACAGACTCGGGGGTCTCAAGTAATGGGTGCTTTGTACCCAAATACCATCCCTCTGTGAGAGTGCCTTTCTTGACAACATCCAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR CCA 90 bp | TCCAACTTGGTAGCCTTTGACTACCAAGCCCCTCACTTCCCTCTGTaGACACATCTGTTATTTTGTTGCTTAATGGAACTGGTGGCCAAT | + |
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Preference number: 1 (lower is better) Translates to: SNLVAFDYQAPHFPL*THLLFCCLMELVAN Trigger: ATTGGCCACCAGTTCCATTAAGCAACAAAATAACAGATGTGTCCACAGAGGGAAGTGAGGGGCTTGGTAGTCAAAGGCTACCAAGTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR CAA 90 bp | ACTCTCCTTGCCAATGGCTGCCACACTCTCCAGCTGGTGTCCAACTaGGTAGCCTTTGACTACCAAGCCCCTCACTTCCCTCTGTGGACA | + |
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Preference number: 2 (lower is better) Translates to: TLLANGCHTLQLVSN*VAFDYQAPHFPLWT Trigger: TGTCCACAGAGGGAAGTGAGGGGCTTGGTAGTCAAAGGCTACCAAGTTGGACACCAGCTGGAGAGTGTGGCAGCCATTGGCAAGGAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR-3UTR TCA 90 bp | GGGTCTCACTCTCCTTGCCAATGGCTGCCACACTCTCCAGCTGGTGTCCAACTTTACCTCCACTGGCTCTaGAGCCACTTTCTCTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: GSHSPCQWLPHSPAGVQLYLHWL*SHFLFP Trigger: TGGAAAGAGAAAGTGGCTTCAGAGCCAGTGGAGGTA...AAGTTGGACACCAGCTGGAGAGTGTGGCAGCCATTGGCAAGGAGAGTGAGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR-3UTR CCA 90 bp | TGCTCAGGAGCAGCAAGGAAGGACACTGGAGACCTGAGAGAGGAATGTCACACTCACTCTCCTTGCCAATaGCTGCCACACTCTCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: CSGAARKDTGDLREECHTHSPCQ*LPHSPA Trigger: AGCTGGAGAGTGTGGCAGCCATTGGCAAGGAGAGTG...AGTGTGACATTCCTCTCTCAGGTCTCCAGTGTCCTTCCTTGCTGCTCCTGAGCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR-3UTR CCA 90 bp | CACCCCACCCTCACTTCTGTTACAGCTAGCACACGAGTAGGAATCAAGCAAGGCGCCATGACAAGGCTTTaGCTGCCTGTGTCAGTATGC | + |
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Preference number: 2 (lower is better) Translates to: HPTLTSVTASTRVGIKQGAMTRL*LPVSVC Trigger: GCATACTGACACAGGCAGCCAAAGCCTTGTCATGGC...GCCTTGCTTGATTCCTACTCGTGTGCTAGCTGTAACAGAAGTGAGGGTGGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR-3UTR TCA 90 bp | CCCACCCTCACTTCTGTTACAGCTAGCACACGAGTAGGAATCAAGCAAGGCCAATCTCTTTCCACAAGGTaGTGCTCTCACTGCCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: PTLTSVTASTRVGIKQGQSLSTR*CSHCLG Trigger: ACCCAGGCAGTGAGAGCATCACCTTGTGGAAAGAGA...TTGGCCTTGCTTGATTCCTACTCGTGTGCTAGCTGTAACAGAAGTGAGGGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR-3UTR GCA 90 bp | CCCACCCTCACTTCTGTTACAGCTAGCACACGAGTAGGAATCAAGCAAGGCCAAGCCCGTTGGTGTATCTaGCAGGATCTCTATCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: PTLTSVTASTRVGIKQGQARWCI*QDLYLL Trigger: CAGGAGATAGAGATCCTGGCAGATACACCAACGGGC...TTGGCCTTGCTTGATTCCTACTCGTGTGCTAGCTGTAACAGAAGTGAGGGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR-3UTR TCA 90 bp | GCGCGGTCAGGCGGCTTTGACTTACAGTTGTCTCTGCTATATATTTATGTTGCCCTATGCAGGAACTTGTaGGGGGAAGCAGCACCCTCA | + |
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Preference number: 2 (lower is better) Translates to: ARSGGFDLQLSLLYIYVALCRNL*GEAAPS Trigger: TGAGGGTGCTGCTTCCCCTCACAAGTTCCTGCATAG...GGCAACATAAATATATAGCAGAGACAACTGTAAGTCAAAGCCGCCTGACCGCGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR-3UTR CCA 90 bp | TTGGCTGCCTGTGTCAGTATGCCTGACTCAGTGACCAGGGTCTCACTCTCCTTGCCTCACTTCCCTCTGTaGACACATCTGTTATTTTGT | + |
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Preference number: 2 (lower is better) Translates to: LAACVSMPDSVTRVSLSLPHFPL*THLLFC Trigger: ACAAAATAACAGATGTGTCCACAGAGGGAAGTGAGG...CAAGGAGAGTGAGACCCTGGTCACTGAGTCAGGCATACTGACACAGGCAGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR-3UTR TCA 90 bp | TGCTCAGGAGCAGCAAGGAAGGACACTGGAGACCTGAGAGAGGAATGTCACACTAGTCTGTCACCAAAATaGCCTAGCCTTCTATCGAAT | + |
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Preference number: 2 (lower is better) Translates to: CSGAARKDTGDLREECHTSLSPK*PSLLSN Trigger: ATTCGATAGAAGGCTAGGTCATTTTGGTGACAGACT...AGTGTGACATTCCTCTCTCAGGTCTCCAGTGTCCTTCCTTGCTGCTCCTGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR-3UTR TCA 90 bp | CCCACCCTCACTTCTGTTACAGCTAGCACACGAGTAGGAATCAAGCAAGGCCAAACCTCCAACACATATTaGTACAACCCCCAAAATCCA | + |
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Preference number: 2 (lower is better) Translates to: PTLTSVTASTRVGIKQGQTSNTY*YNPQNP Trigger: TGGATTTTGGGGGTTGTATCAATATGTGTTGGAGGT...TTGGCCTTGCTTGATTCCTACTCGTGTGCTAGCTGTAACAGAAGTGAGGGTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR-3UTR GCA 90 bp | TACCAAACGGAGTTGCTTTACAGTCTATTGGATGTTGTCAAGAAAGGCACTCTCGGGTCTCACTCTCCTTaGCAATGGCTGCCACACTCT | + |
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Preference number: 2 (lower is better) Translates to: YQTELLYSLLDVVKKGTLGSHSP*QWLPHS Trigger: AGAGTGTGGCAGCCATTGGCAAGGAGAGTGAGACCC...GAGAGTGCCTTTCTTGACAACATCCAATAGACTGTAAAGCAACTCCGTTTGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR-3UTR CCA 90 bp | GCGCGGTCAGGCGGCTTTGACTTACAGTTGTCTCTGCTATATATTTATGTTGCCCTCCCAAAGCGATGGTaGCTGTCATTCATAGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: ARSGGFDLQLSLLYIYVALPKRW*LSFIAE Trigger: TTCTGCTATGAATGACAGCCACCATCGCTTTGGGAG...GGCAACATAAATATATAGCAGAGACAACTGTAAGTCAAAGCCGCCTGACCGCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR-3UTR TCA 90 bp | TACCAAACGGAGTTGCTTTACAGTCTATTGGATGTTGTCAAGAAAGGCACTCTCTTTCGAAGGTGGCACTaGGGAGGTGGTATCCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: YQTELLYSLLDVVKKGTLFRRWH*GGGILL Trigger: AAGCAGGATACCACCTCCTCAGTGCCACCTTCGAAA...GAGAGTGCCTTTCTTGACAACATCCAATAGACTGTAAAGCAACTCCGTTTGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR-3UTR CCA 90 bp | TACCAAACGGAGTTGCTTTACAGTCTATTGGATGTTGTCAAGAAAGGCACTCTCGTGGCACTGAGGAGGTaGTATCCTGCTTCCAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: YQTELLYSLLDVVKKGTLVALRR*YPASRK Trigger: TTTCCTGGAAGCAGGATACCACCTCCTCAGTGCCAC...GAGAGTGCCTTTCTTGACAACATCCAATAGACTGTAAAGCAACTCCGTTTGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR-3UTR CCA 90 bp | ACCAAACGGAGTTGCTTTACAGTCTATTGGATGTTGTCAAGAAAGGCACTCTCACCATCGTTAAGGCACTaGGTTTCGAAGGTGGCACTG | + |
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Preference number: 2 (lower is better) Translates to: TKRSCFTVYWMLSRKALSPSLRH*VSKVAL Trigger: CAGTGCCACCTTCGAAACCCAGTGCCTTAACGATGG...TGAGAGTGCCTTTCTTGACAACATCCAATAGACTGTAAAGCAACTCCGTTTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR-3UTR CCA 90 bp | GATTCAAAAGACTTCGGGGGACTGTGCCCAATATTCCTGGAGCCAAGGCATCTCCAACACCTATTCATTTaGTTTGTATCACTAGAGTCC | + |
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Preference number: 2 (lower is better) Translates to: DSKDFGGLCPIFLEPRHLQHLFI*FVSLES Trigger: GGACTCTAGTGATACAAACCAAATGAATAGGTGTTG...GAGATGCCTTGGCTCCAGGAATATTGGGCACAGTCCCCCGAAGTCTTTTGAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR-3UTR GCA 90 bp | CAATATTCCTGGAGCCAAGGCATCTCTGGATGTAGTAGGGTCACAAGTCAAACGATAAGAACAATTTTCTaGCTGTCCTATGGTCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: QYSWSQGISGCSRVTSQTIRTIF*LSYGQE Trigger: CTCCTGACCATAGGACAGGCAGAAAATTGTTCTTAT...CGTTTGACTTGTGACCCTACTACATCCAGAGATGCCTTGGCTCCAGGAATATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR-3UTR CCA 90 bp | ACCAAACGGAGTTGCTTTACAGTCTATTGGATGTTGTCAAGAAAGGCACTCTCATGCTTCCAGGAAATGTaGAGTCAAATGTGGACTCCC | + |
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Preference number: 2 (lower is better) Translates to: TKRSCFTVYWMLSRKALSCFQEM*SQMWTP Trigger: GGGAGTCCACATTTGACTCCACATTTCCTGGAAGCA...TGAGAGTGCCTTTCTTGACAACATCCAATAGACTGTAAAGCAACTCCGTTTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR-3UTR GCA 90 bp | TTCCACATTAAATACATAGTAGTCTTACCTCCTCCTTTGAACACTTACAGTGAACTAGGGTGGGGGAAGTaGTTACTTAGGGACATCTCT | + |
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Preference number: 2 (lower is better) Translates to: FHIKYIVVLPPPLNTYSELGWGK*LLRDIS Trigger: AGAGATGTCCCTAAGTAAGCACTTCCCCCACCCTAG...TTCACTGTAAGTGTTCAAAGGAGGAGGTAAGACTACTATGTATTTAATGTGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR-3UTR CCA 90 bp | TTCCACATTAAATACATAGTAGTCTTACCTCCTCCTTTGAACACTTACAGTGAAAGCAAGGAAGGACACTaGAGACCTGAGAGAGGAATG | + |
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Preference number: 2 (lower is better) Translates to: FHIKYIVVLPPPLNTYSESKEGH*RPERGM Trigger: CATTCCTCTCTCAGGTCTCCAGTGTCCTTCCTTGCT...TTCACTGTAAGTGTTCAAAGGAGGAGGTAAGACTACTATGTATTTAATGTGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR CAA 90 bp | TATGTTTTGTTCCACATTAAATACATAGTAGTCTTACCTCCTCCTTaGAACACTTACAGTGAAAGCCCACTCTTCTGCCTTGGAAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: YVLFHIKYIVVLPPP*NTYSESPLFCLGRS Trigger: ACTCCTTCCAAGGCAGAAGAGTGGGCTTTCACTGTAAGTGTTCAAAGGAGGAGGTAAGACTACTATGTATTTAATGTGGAACAAAACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR GCA 72 bp | CTCAGTGACCAGGGTCTCACTCTCCTTGCCAATGGCTaGCACACTCTCCAGCTGGTGTCCAACTTGGTAGCC | + |
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Preference number: 3 (lower is better) Translates to: LSDQGLTLLANG*HTLQLVSNLVA Trigger: GGCTACCAAGTTGGACACCAGCTGGAGAGTGTGGCAGCCATTGGCAAGGAGAGTGAGACCCTGGTCACTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR CCA 72 bp | GCCCCACTTGCCAATGGGCTCCCATCGTTAAGGCACTaGGTTTCGAAGGTGGCACTGAGGAGGTGGTATCCT | + |
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Preference number: 3 (lower is better) Translates to: APLANGLPSLRH*VSKVALRRWYP Trigger: AGGATACCACCTCCTCAGTGCCACCTTCGAAACCCAGTGCCTTAACGATGGGAGCCCATTGGCAAGTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR TCA 72 bp | CCACACTCTCCAGCTGGTGTCCAACTTGGTAGCCTTTaGCTACCAAGCCCCTCACTTCCCTCTGTGGACACA | + |
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Preference number: 3 (lower is better) Translates to: PHSPAGVQLGSL*LPSPSLPSVDT Trigger: TGTGTCCACAGAGGGAAGTGAGGGGCTTGGTAGTCAAAGGCTACCAAGTTGGACACCAGCTGGAGAGTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR CCA 72 bp | CATCGCTCCCTCCACCAGGGACCTCATCTTCTAGGGTaGGGGAAGTGCTTACTTAGGGACATCTCTATGCAG | + |
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Preference number: 3 (lower is better) Translates to: HRSLHQGPHLLG*GKCLLRDISMQ Trigger: CTGCATAGAGATGTCCCTAAGTAAGCACTTCCCCCACCCTAGAAGATGAGGTCCCTGGTGGAGGGAGCGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR GCA 72 bp | AGGCTTCACATGCTAAGCCTTCTCTATGGCCCCACTTaGCAATGGGCTCCCATCGTTAAGGCACTGGGTTTC | + |
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Preference number: 3 (lower is better) Translates to: RLHMLSLLYGPT*QWAPIVKALGF Trigger: GAAACCCAGTGCCTTAACGATGGGAGCCCATTGGCAAGTGGGGCCATAGAGAAGGCTTAGCATGTGAAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR CCA 72 bp | GGCACTGAGGAGGTGGTATCCTGCTTCCAGGAAATGTaGAGTCAAATGTGGACTCCCAAAGCGATGGTGGCT | + |
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Preference number: 3 (lower is better) Translates to: GTEEVVSCFQEM*SQMWTPKAMVA Trigger: AGCCACCATCGCTTTGGGAGTCCACATTTGACTCCACATTTCCTGGAAGCAGGATACCACCTCCTCAGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR CCA 72 bp | CACATGCTAAGCCTTCTCTATGGCCCCACTTGCCAATaGGCTCCCATCGTTAAGGCACTGGGTTTCGAAGGT | + |
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Preference number: 3 (lower is better) Translates to: HMLSLLYGPTCQ*APIVKALGFEG Trigger: ACCTTCGAAACCCAGTGCCTTAACGATGGGAGCCCATTGGCAAGTGGGGCCATAGAGAAGGCTTAGCATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR TCA 72 bp | CCACTGGCTCTGAAGCCACTTTCTCTTTCCACAAGGTaGTGCTCTCACTGCCTGGGTGAAGTCAAGTCCCAA | + |
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Preference number: 3 (lower is better) Translates to: PLALKPLSLSTR*CSHCLGEVKSQ Trigger: TTGGGACTTGACTTCACCCAGGCAGTGAGAGCATCACCTTGTGGAAAGAGAAAGTGGCTTCAGAGCCAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR CCA 72 bp | ATTCAAAAGACTTCGGGGGACTGTGCCCAATATTCCTaGAGCCAAGGCATCTCTGGATGTAGTAGGGTCACA | + |
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Preference number: 3 (lower is better) Translates to: IQKTSGDCAQYS*SQGISGCSRVT Trigger: TGTGACCCTACTACATCCAGAGATGCCTTGGCTCCAGGAATATTGGGCACAGTCCCCCGAAGTCTTTTGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR CCA 72 bp | GTGGTATCCTGCTTCCAGGAAATGTGGAGTCAAATGTaGACTCCCAAAGCGATGGTGGCTGTCATTCATAGC | + |
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Preference number: 3 (lower is better) Translates to: VVSCFQEMWSQM*TPKAMVAVIHS Trigger: GCTATGAATGACAGCCACCATCGCTTTGGGAGTCCACATTTGACTCCACATTTCCTGGAAGCAGGATACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR CCA 72 bp | TTAAGGCACTGGGTTTCGAAGGTGGCACTGAGGAGGTaGTATCCTGCTTCCAGGAAATGTGGAGTCAAATGT | + |
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Preference number: 3 (lower is better) Translates to: LRHWVSKVALRR*YPASRKCGVKC Trigger: ACATTTGACTCCACATTTCCTGGAAGCAGGATACCACCTCCTCAGTGCCACCTTCGAAACCCAGTGCCTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR CCA 72 bp | TTGTCAAGAAAGGCACTCTCACAGAGGGATGGTATTTaGGTACAAAGCACCCATTACTTGAGACCCCCGAGT | + |
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Preference number: 3 (lower is better) Translates to: LSRKALSQRDGI*VQSTHYLRPPS Trigger: ACTCGGGGGTCTCAAGTAATGGGTGCTTTGTACCCAAATACCATCCCTCTGTGAGAGTGCCTTTCTTGACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR TCA 72 bp | TCACCACTGAGGAAGTCTGTCACCTCCAACACATATTaGTACAACCCCCAAAATCCAGGGATTCACCAGCAT | + |
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Preference number: 3 (lower is better) Translates to: SPLRKSVTSNTY*YNPQNPGIHQH Trigger: ATGCTGGTGAATCCCTGGATTTTGGGGGTTGTATCAATATGTGTTGGAGGTGACAGACTTCCTCAGTGGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR TCA 72 bp | ACCCATTACTTGAGACCCCCGAGTCTGTCACCAAAATaGCCTAGCCTTCTATCGAATTTGCTCTGGTTGGAA | + |
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Preference number: 3 (lower is better) Translates to: THYLRPPSLSPK*PSLLSNLLWLE Trigger: TTCCAACCAGAGCAAATTCGATAGAAGGCTAGGTCATTTTGGTGACAGACTCGGGGGTCTCAAGTAATGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR-3UTR CAA 90 bp | ACCAAACGGAGTTGCTTTACAGTCTATTGGATGTTGTCAAGAAAGGCACTCTCACAGCTGGTGTCCAACTaGGTAGCCTTTGACTACCAA | + |
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Preference number: 3 (lower is better) Translates to: TKRSCFTVYWMLSRKALSQLVSN*VAFDYQ Trigger: TTGGTAGTCAAAGGCTACCAAGTTGGACACCAGCTG...TGAGAGTGCCTTTCTTGACAACATCCAATAGACTGTAAAGCAACTCCGTTTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR CCA 72 bp | TGCCTGTCCTATGGTCAGGAGCAACACCTATTCATTTaGTTTGTATCACTAGAGTCCATTTTCCTTCCGTGC | + |
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Preference number: 3 (lower is better) Translates to: CLSYGQEQHLFI*FVSLESIFLPC Trigger: GCACGGAAGGAAAATGGACTCTAGTGATACAAACCAAATGAATAGGTGTTGCTCCTGACCATAGGACAGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| 3UTR CCA 72 bp | GTAGCCTTTGACTACCAAGCCCCTCACTTCCCTCTGTaGACACATCTGTTATTTTGTTGCTTAATGGAACTG | + |
|
Preference number: 3 (lower is better) Translates to: VAFDYQAPHFPL*THLLFCCLMEL Trigger: CAGTTCCATTAAGCAACAAAATAACAGATGTGTCCACAGAGGGAAGTGAGGGGCTTGGTAGTCAAAGGCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| 3UTR CCA 72 bp | TTGGATGTTGTCAAGAAAGGCACTCTCACAGAGGGATaGTATTTGGGTACAAAGCACCCATTACTTGAGACC | + |
|
Preference number: 3 (lower is better) Translates to: LDVVKKGTLTEG*YLGTKHPLLET Trigger: GGTCTCAAGTAATGGGTGCTTTGTACCCAAATACCATCCCTCTGTGAGAGTGCCTTTCTTGACAACATCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| 3UTR GCA 72 bp | CCTCACTTCCCTCTGTGGACACATCTGTTATTTTGTTaGTTAATGGAACTGGTGGCCAATGAGATTCTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: PHFPLWTHLLFC*LMELVANEILH Trigger: ATGCAGAATCTCATTGGCCACCAGTTCCATTAAGCAACAAAATAACAGATGTGTCCACAGAGGGAAGTGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| 3UTR CCA 72 bp | ACATGGAATACCAAACGGAGTTGCTTTACAGTCTATTaGATGTTGTCAAGAAAGGCACTCTCACAGAGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: TWNTKRSCFTVY*MLSRKALSQRD Trigger: ATCCCTCTGTGAGAGTGCCTTTCTTGACAACATCCAATAGACTGTAAAGCAACTCCGTTTGGTATTCCATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| 3UTR-3UTR CAA 90 bp | AAACGGAGTTGCTTTACAGTCTATTGGATGTTGTCAAGAAAGGCACTCTCACAGGACACATCTGTTATTTaGTTGCTTAATGGAACTGGT | + |
|
Preference number: 3 (lower is better) Translates to: KRSCFTVYWMLSRKALSQDTSVI*LLNGTG Trigger: ACCAGTTCCATTAAGCAACAAAATAACAGATGTGTC...CTGTGAGAGTGCCTTTCTTGACAACATCCAATAGACTGTAAAGCAACTCCGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| 3UTR-3UTR CAA 90 bp | TTCCACATTAAATACATAGTAGTCTTACCTCCTCCTTTGAACACTTACAGTGAAGCAACACCTATTCATTaGGTTTGTATCACTAGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: FHIKYIVVLPPPLNTYSEATPIH*VCITRV Trigger: GACTCTAGTGATACAAACCAAATGAATAGGTGTTGC...TTCACTGTAAGTGTTCAAAGGAGGAGGTAAGACTACTATGTATTTAATGTGGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| 3UTR GCA 72 bp | AATGGACAGATTAGAAAACCAAATTCGAACCTTGGCTaGGGTAAGACTATGTTTTGTTCCACATTAAATACA | + |
|
Preference number: 3 (lower is better) Translates to: NGQIRKPNSNLG*GKTMFCSTLNT Trigger: TGTATTTAATGTGGAACAAAACATAGTCTTACCGCAGCCAAGGTTCGAATTTGGTTTTCTAATCTGTCCATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR TCA 90 bp | GGGTCTCACTCTCCTTGCCAATGGCTGCCACACTCTCCAGCTGGTGTCCAACTTACAGTGTCCATCCTCTaGGTAGCCCAGCTGGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GSHSPCQWLPHSPAGVQLTVSIL*VAQLED Trigger: GTCTTCCAGCTGGGCTACTCAGAGGATGGACACTGT...AAGTTGGACACCAGCTGGAGAGTGTGGCAGCCATTGGCAAGGAGAGTGAGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR GCA 90 bp | TGCTCAGGAGCAGCAAGGAAGGACACTGGAGACCTGAGAGAGGAATGTCACACTATCTGCTGCATCTGCTaGTCCAGCTCACGGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CSGAARKDTGDLREECHTICCIC*SSSRGL Trigger: GAGGCCCCGTGAGCTGGAGCAGCAGATGCAGCAGAT...AGTGTGACATTCCTCTCTCAGGTCTCCAGTGTCCTTCCTTGCTGCTCCTGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR CCA 90 bp | TTGGCTGCCTGTGTCAGTATGCCTGACTCAGTGACCAGGGTCTCACTCTCCTTGCGCGGCAGAGACGTCTaGAAGCTGTACAACATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LAACVSMPDSVTRVSLSLRGRDV*KLYNMG Trigger: GCCCATGTTGTACAGCTTCCAGACGTCTCTGCCGCG...CAAGGAGAGTGAGACCCTGGTCACTGAGTCAGGCATACTGACACAGGCAGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR CCA 90 bp | GGGTCTCACTCTCCTTGCCAATGGCTGCCACACTCTCCAGCTGGTGTCCAACTTTGTCCCACTGTAGCCTaGTGGGTTTGGGGATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSHSPCQWLPHSPAGVQLCPTVA*WVWGCW Trigger: CCAACATCCCCAAACCCACCAGGCTACAGTGGGACA...AAGTTGGACACCAGCTGGAGAGTGTGGCAGCCATTGGCAAGGAGAGTGAGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| 3UTR CAA 72 bp | GCCAATGGCTGCCACACTCTCCAGCTGGTGTCCAACTaGGTAGCCTTTGACTACCAAGCCCCTCACTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ANGCHTLQLVSN*VAFDYQAPHFP Trigger: AGGGAAGTGAGGGGCTTGGTAGTCAAAGGCTACCAAGTTGGACACCAGCTGGAGAGTGTGGCAGCCATTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| 3UTR CAA 72 bp | AGTATGCCTGACTCAGTGACCAGGGTCTCACTCTCCTaGCCAATGGCTGCCACACTCTCCAGCTGGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SMPDSVTRVSLS*PMAATLSSWCP Trigger: TGGACACCAGCTGGAGAGTGTGGCAGCCATTGGCAAGGAGAGTGAGACCCTGGTCACTGAGTCAGGCATACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR TCA 90 bp | CTCACTCTCCTTGCCAATGGCTGCCACACTCTCCAGCTGGTGTCCAACTTGGTAGGTAGAGCCAGACCTTaGAGTAACGGCCTCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LTLLANGCHTLQLVSNLVGRARP*SNGLCG Trigger: ACCACAGAGGCCGTTACTTCAAGGTCTGGCTCTACC...TACCAAGTTGGACACCAGCTGGAGAGTGTGGCAGCCATTGGCAAGGAGAGTGAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR GCA 90 bp | GCTTCACATGCTAAGCCTTCTCTATGGCCCCACTTGCCAATGGGCTCCCATCGTGTTGCCAGCTCTCGCTaGCTGAATATGGGTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ASHAKPSLWPHLPMGSHRVASSR*LNMGWG Trigger: ACCCCAACCCATATTCAGGCAGCGAGAGCTGGCAAC...ACGATGGGAGCCCATTGGCAAGTGGGGCCATAGAGAAGGCTTAGCATGTGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR CCA 90 bp | CCCACCCTCACTTCTGTTACAGCTAGCACACGAGTAGGAATCAAGCAAGGCCAAGGTATCTTTGACAGCTaGGACAGGCAGGCGCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PTLTSVTASTRVGIKQGQGIFDS*DRQARQ Trigger: CTGCCGCGCCTGCCTGTCCCAGCTGTCAAAGATACC...TTGGCCTTGCTTGATTCCTACTCGTGTGCTAGCTGTAACAGAAGTGAGGGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR TCA 90 bp | GCTTCACATGCTAAGCCTTCTCTATGGCCCCACTTGCCAATGGGCTCCCATCGTTGGAAGCCTCATACGTaGGGCAGAACTTGCCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: ASHAKPSLWPHLPMGSHRWKPHT*GRTCPC Trigger: ACATGGGCAAGTTCTGCCTCACGTATGAGGCTTCCA...ACGATGGGAGCCCATTGGCAAGTGGGGCCATAGAGAAGGCTTAGCATGTGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR CCA 90 bp | CTCACTCTCCTTGCCAATGGCTGCCACACTCTCCAGCTGGTGTCCAACTTGGTATCCCTCCTTCATCAGTaGCCTCACAGACTCCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LTLLANGCHTLQLVSNLVSLLHQ*PHRLQV Trigger: TACCTGGAGTCTGTGAGGCCACTGATGAAGGAGGGA...TACCAAGTTGGACACCAGCTGGAGAGTGTGGCAGCCATTGGCAAGGAGAGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR CCA 90 bp | GGGTCTCACTCTCCTTGCCAATGGCTGCCACACTCTCCAGCTGGTGTCCAACTTAGTGCTGTCATGCGTTaGAAGTCTCCCTCCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: GSHSPCQWLPHSPAGVQLSAVMR*KSPSFI Trigger: GATGAAGGAGGGAGACTTCCAACGCATGACAGCACT...AAGTTGGACACCAGCTGGAGAGTGTGGCAGCCATTGGCAAGGAGAGTGAGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR GCA 90 bp | CTCACTCTCCTTGCCAATGGCTGCCACACTCTCCAGCTGGTGTCCAACTTGGTAAAAATCCTGGGCCAGTaGTGTCATGCGTTGGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LTLLANGCHTLQLVSNLVKILGQ*CHALEV Trigger: GACTTCCAACGCATGACAGCACTGGCCCAGGATTTT...TACCAAGTTGGACACCAGCTGGAGAGTGTGGCAGCCATTGGCAAGGAGAGTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR GCA 90 bp | CGGAGTTGCTTTACAGTCTATTGGATGTTGTCAAGAAAGGCACTCTCACAGAGGCCACCCAGAGCCCTGTaGCAAAGAGGACGCCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: RSCFTVYWMLSRKALSQRPPRAL*QRGRHS Trigger: TGAGTGGCGTCCTCTTTGGCACAGGGCTCTGGGTGG...CCTCTGTGAGAGTGCCTTTCTTGACAACATCCAATAGACTGTAAAGCAACTCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR GCA 90 bp | GGGTCTCACTCTCCTTGCCAATGGCTGCCACACTCTCCAGCTGGTGTCCAACTTTCAAATGGGAAGGAATaGAGGTCCACATCATTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GSHSPCQWLPHSPAGVQLSNGKE*RSTSFA Trigger: GGCAAATGATGTGGACCTGCATTCCTTCCCATTTGA...AAGTTGGACACCAGCTGGAGAGTGTGGCAGCCATTGGCAAGGAGAGTGAGACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR TCA 90 bp | TGCTCAGGAGCAGCAAGGAAGGACACTGGAGACCTGAGAGAGGAATGTCACACTTTTGGTATGCATGGATaGTATCACACCCACCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: CSGAARKDTGDLREECHTFGMHG*YHTHHH Trigger: GTGGTGGTGGGTGTGATATCATCCATGCATACCAAA...AGTGTGACATTCCTCTCTCAGGTCTCCAGTGTCCTTCCTTGCTGCTCCTGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR TCA 90 bp | GATTCAAAAGACTTCGGGGGACTGTGCCCAATATTCCTGGAGCCAAGGCATCTCGAATATGGGTTGGGGTaGTGTAGAGCATCTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: DSKDFGGLCPIFLEPRHLEYGLG*CRASPW Trigger: CCATGGAGATGCTCTACATCACCCCAACCCATATTC...GAGATGCCTTGGCTCCAGGAATATTGGGCACAGTCCCCCGAAGTCTTTTGAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR GCA 90 bp | CAATATTCCTGGAGCCAAGGCATCTCTGGATGTAGTAGGGTCACAAGTCAAACGGCGTCCGCCCAGGAATaGTCTGCGTTTATGCCTATC | + |
|
Preference number: 4 (lower is better) Translates to: QYSWSQGISGCSRVTSQTASAQE*SAFMPI Trigger: GATAGGCATAAACGCAGAGCATTCCTGGGCGGACGC...CGTTTGACTTGTGACCCTACTACATCCAGAGATGCCTTGGCTCCAGGAATATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR CCA 90 bp | CCCACCCTCACTTCTGTTACAGCTAGCACACGAGTAGGAATCAAGCAAGGCCAAGGAAGCTGTACAACATaGGCTTTCGACCCGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PTLTSVTASTRVGIKQGQGSCTT*AFDPRR Trigger: TCTTCTCGGGTCGAAAGCCCATGTTGTACAGCTTCC...TTGGCCTTGCTTGATTCCTACTCGTGTGCTAGCTGTAACAGAAGTGAGGGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR CCA 90 bp | GCTAGAGCTGTTACCTCCACTGGCTCTGAAGCCACTTTCTCTTTCCACAAGGTGTTGACAGCAAAATCCTaGGCCAGTGCTGTCATGCGT | + |
|
Preference number: 4 (lower is better) Translates to: ARAVTSTGSEATFSFHKVLTAKS*ASAVMR Trigger: ACGCATGACAGCACTGGCCCAGGATTTTGCTGTCAA...CACCTTGTGGAAAGAGAAAGTGGCTTCAGAGCCAGTGGAGGTAACAGCTCTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR GCA 90 bp | GATTCAAAAGACTTCGGGGGACTGTGCCCAATATTCCTGGAGCCAAGGCATCTCCATTTTGCCGTGCTCTaGAAACATCCAGCCATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: DSKDFGGLCPIFLEPRHLHFAVL*KHPAMV Trigger: TACCATGGCTGGATGTTTGCAGAGCACGGCAAAATG...GAGATGCCTTGGCTCCAGGAATATTGGGCACAGTCCCCCGAAGTCTTTTGAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR GCA 90 bp | CCCACCCTCACTTCTGTTACAGCTAGCACACGAGTAGGAATCAAGCAAGGCCAACGGTACAGGTGCTGGTaGTTTTCACAAGCTATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PTLTSVTASTRVGIKQGQRYRCW*FSQAIL Trigger: CAAGATAGCTTGTGAAAAGCACCAGCACCTGTACCG...TTGGCCTTGCTTGATTCCTACTCGTGTGCTAGCTGTAACAGAAGTGAGGGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR CCA 90 bp | CAATATTCCTGGAGCCAAGGCATCTCTGGATGTAGTAGGGTCACAAGTCAAACGGTAGCCTGGTGGGTTTaGGGATGTTGGGGTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QYSWSQGISGCSRVTSQTVAWWV*GCWGSC Trigger: ACAAGAACCCCAACATCCCCAAACCCACCAGGCTAC...CGTTTGACTTGTGACCCTACTACATCCAGAGATGCCTTGGCTCCAGGAATATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR CCA 90 bp | GCGCGGTCAGGCGGCTTTGACTTACAGTTGTCTCTGCTATATATTTATGTTGCCCGTGGACAACCTCCATaGCTCAGACAGTACCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ARSGGFDLQLSLLYIYVARGQPP*LRQYLL Trigger: AAGGAGGTACTGTCTGAGCCATGGAGGTTGTCCACG...GGCAACATAAATATATAGCAGAGACAACTGTAAGTCAAAGCCGCCTGACCGCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| 3UTR CAA 72 bp | GTTGTCAAGAAAGGCACTCTCACAGAGGGATGGTATTaGGGTACAAAGCACCCATTACTTGAGACCCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: VVKKGTLTEGWY*GTKHPLLETPE Trigger: CTCGGGGGTCTCAAGTAATGGGTGCTTTGTACCCAAATACCATCCCTCTGTGAGAGTGCCTTTCTTGACAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| 3UTR CAA 72 bp | GAAGGACACTGGAGACCTGAGAGAGGAATGTCACACTaGGGTACTAGCAGGAATACTCCGAGTAACAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EGHWRPERGMSH*GTSRNTPSNRG Trigger: ACCTCTGTTACTCGGAGTATTCCTGCTAGTACCCAAGTGTGACATTCCTCTCTCAGGTCTCCAGTGTCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR GCA 90 bp | CGGAGTTGCTTTACAGTCTATTGGATGTTGTCAAGAAAGGCACTCTCACAGAGGTTCTTCTTCCAGGAGTaGAGCCCTGACAGGCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: RSCFTVYWMLSRKALSQRFFFQE*SPDRQI Trigger: GATCTGCCTGTCAGGGCTGCACTCCTGGAAGAAGAA...CCTCTGTGAGAGTGCCTTTCTTGACAACATCCAATAGACTGTAAAGCAACTCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR GCA 90 bp | TTTTCTGCCTGTCCTATGGTCAGGAGCAACACCTATTCATTTGGTTTGTATCACGGGCCAGTGCTGTCATaGGTTGGAAGTCTCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSACPMVRSNTYSFGLYHGPVLS*VGSLPP Trigger: AGGAGGGAGACTTCCAACGCATGACAGCACTGGCCC...GTGATACAAACCAAATGAATAGGTGTTGCTCCTGACCATAGGACAGGCAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR CCA 90 bp | GCGCGGTCAGGCGGCTTTGACTTACAGTTGTCTCTGCTATATATTTATGTTGCCCGACTGCCAGATACTTaGACACCACATAGAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ARSGGFDLQLSLLYIYVARLPDT*TPHRGR Trigger: TCTGCCTCTATGTGGTGTCCAAGTATCTGGCAGTCG...GGCAACATAAATATATAGCAGAGACAACTGTAAGTCAAAGCCGCCTGACCGCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR TCA 90 bp | GCGCGGTCAGGCGGCTTTGACTTACAGTTGTCTCTGCTATATATTTATGTTGCCTGTCTAGGGTCCGATTaGTCTTTGCAATCATGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ARSGGFDLQLSLLYIYVACLGSD*SLQSCP Trigger: TGGGCATGATTGCAAAGATCAATCGGACCCTAGACA...GGCAACATAAATATATAGCAGAGACAACTGTAAGTCAAAGCCGCCTGACCGCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR TCA 90 bp | ACCAAACGGAGTTGCTTTACAGTCTATTGGATGTTGTCAAGAAAGGCACTCTCAGGATGCGGGAAGTATTaGAGAGTCGCTCCCACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TKRSCFTVYWMLSRKALSGCGKY*RVAPTE Trigger: CTCAGTGGGAGCGACTCTTCAATACTTCCCGCATCC...TGAGAGTGCCTTTCTTGACAACATCCAATAGACTGTAAAGCAACTCCGTTTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR GCA 90 bp | GCTAGAGCTGTTACCTCCACTGGCTCTGAAGCCACTTTCTCTTTCCACAAGGTGAGCTTCAAATACCACTaGAATTTGGGTCCAAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ARAVTSTGSEATFSFHKVSFKYH*NLGPRL Trigger: CAACCTTGGACCCAAATTGCAGTGGTATTTGAAGCT...CACCTTGTGGAAAGAGAAAGTGGCTTCAGAGCCAGTGGAGGTAACAGCTCTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR CCA 90 bp | CTCACTCTCCTTGCCAATGGCTGCCACACTCTCCAGCTGGTGTCCAACTTGGTAGAAGAAATATGGAAGTaGATGAAATTCTCTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LTLLANGCHTLQLVSNLVEEIWK*MKFSPT Trigger: TGTGGGAGAGAATTTCATCCACTTCCATATTTCTTC...TACCAAGTTGGACACCAGCTGGAGAGTGTGGCAGCCATTGGCAAGGAGAGTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR TCA 90 bp | TTGATACAACCCCCAAAATCCAGGGATTCACCAGCATTTAAATCCCTTTATCCATGTGCCTGCTGTCCTTaGCGTGTTGGATGGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LIQPPKSRDSPAFKSLYPCACCP*RVGWCL Trigger: CAGACACCATCCAACACGTCAAGGACAGCAGGCACA...TGGATAAAGGGATTTAAATGCTGGTGAATCCCTGGATTTTGGGGGTTGTATCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR TCA 90 bp | TTGATACAACCCCCAAAATCCAGGGATTCACCAGCATTTAAATCCCTTTATCCACTTCCCAAAGCGGTGTaGGTCTGTCTCAGGGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LIQPPKSRDSPAFKSLYPLPKAV*VCLRAR Trigger: TCTAGCCCTGAGACAGACTCACACCGCTTTGGGAAG...TGGATAAAGGGATTTAAATGCTGGTGAATCCCTGGATTTTGGGGGTTGTATCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR CCA 90 bp | ACCAAACGGAGTTGCTTTACAGTCTATTGGATGTTGTCAAGAAAGGCACTCTCATGTTTGAGGGCTTCATaGCTCAGGCGGAGATCGATG | + |
|
Preference number: 4 (lower is better) Translates to: TKRSCFTVYWMLSRKALSCLRAS*LRRRSM Trigger: CATCGATCTCCGCCTGAGCCATGAAGCCCTCAAACA...TGAGAGTGCCTTTCTTGACAACATCCAATAGACTGTAAAGCAACTCCGTTTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| 3UTR CAA 72 bp | CTGCCTGTCCTATGGTCAGGAGCAACACCTATTCATTaGGTTTGTATCACTAGAGTCCATTTTCCTTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPVLWSGATPIH*VCITRVHFPSV Trigger: CACGGAAGGAAAATGGACTCTAGTGATACAAACCAAATGAATAGGTGTTGCTCCTGACCATAGGACAGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR TCA 90 bp | TTGATACAACCCCCAAAATCCAGGGATTCACCAGCATTTAAATCCCTTTATCCATTAGGGATGTCTCTATaGCCTCCTGGCATTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LIQPPKSRDSPAFKSLYPLGMSL*PPGILL Trigger: CAGGAGAATGCCAGGAGGTCATAGAGACATCCCTAA...TGGATAAAGGGATTTAAATGCTGGTGAATCCCTGGATTTTGGGGGTTGTATCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR CCA 90 bp | ACCAAACGGAGTTGCTTTACAGTCTATTGGATGTTGTCAAGAAAGGCACTCTCATGCCTGAATATGGGTTaGGGTGATGTAGAGCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: TKRSCFTVYWMLSRKALSCLNMG*GDVEHL Trigger: GAGATGCTCTACATCACCCCAACCCATATTCAGGCA...TGAGAGTGCCTTTCTTGACAACATCCAATAGACTGTAAAGCAACTCCGTTTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| 3UTR CAA 72 bp | TACATGGAATACCAAACGGAGTTGCTTTACAGTCTATaGGATGTTGTCAAGAAAGGCACTCTCACAGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YMEYQTELLYSL*DVVKKGTLTEG Trigger: TCCCTCTGTGAGAGTGCCTTTCTTGACAACATCCAATAGACTGTAAAGCAACTCCGTTTGGTATTCCATGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR CCA 90 bp | TTCCACATTAAATACATAGTAGTCTTACCTCCTCCTTTGAACACTTACAGTGAAGTCTCTATGACCTCCTaGCATTCTCCTGGAATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FHIKYIVVLPPPLNTYSEVSMTS*HSPGMS Trigger: GGACATTCCAGGAGAATGCCAGGAGGTCATAGAGAC...TTCACTGTAAGTGTTCAAAGGAGGAGGTAAGACTACTATGTATTTAATGTGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| CDS TCA 90 bp | AATAGGTCTGCCGACACTTCGCCCAGGGCACTCTGTCTGCGGCAGTaGGGGCGGCAAGCTTGGCTTCCCCGGGCTGCGGCTCTGAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: NRSADTSPRALCLRQ*GRQAWLPRAAALRC Trigger: ACACCTCAGAGCCGCAGCCCGGGGAAGCCAAGCTTGCCGCCCTCACTGCCGCAGACAGAGTGCCCTGGGCGAAGTGTCGGCAGACCTATT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025835.6 ENSMUST00000237938.2 |
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| CDS GCA 90 bp | TCGTGCAAAATAGGTCTGCCGACACTTCGCCCAGGGCACTCTGTCTaGGGCAGTGAGGGCGGCAAGCTTGGCTTCCCCGGGCTGCGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SCKIGLPTLRPGHSV*GSEGGKLGFPGLRL Trigger: GAGCCGCAGCCCGGGGAAGCCAAGCTTGCCGCCCTCACTGCCGCAGACAGAGTGCCCTGGGCGAAGTGTCGGCAGACCTATTTTGCACGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025835.6 ENSMUST00000237938.2 |
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| CDS TCA 90 bp | AGTGTCCATCCTCTGAGTAGCCCAGCTGGAAGACGTCGGTGGCCATaGCATACTCCCACAGATGGCCCACGATGGGCGCGTCCGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SVHPLSSPAGRRRWP*HTPTDGPRWARPPR Trigger: CCTGGGCGGACGCGCCCATCGTGGGCCATCTGTGGGAGTATGTCATGGCCACCGACGTCTTCCAGCTGGGCTACTCAGAGGATGGACACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| CDS TCA 90 bp | GCTCACGGGGCCTCAGCAGCCTCCCGTCATGGTAGAGCCAGACCTTaGAGTAACGGCCTCTGTGGTACACGACAATGTGCCTGCTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: AHGASAASRHGRARP*SNGLCGTRQCACCP Trigger: AGGACAGCAGGCACATTGTCGTGTACCACAGAGGCCGTTACTTCAAGGTCTGGCTCTACCATGACGGGAGGCTGCTGAGGCCCCGTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025835.6 ENSMUST00000237938.2 |
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| CDS TCA 90 bp | TCATCAGTGGCCTCACAGACTCCAGGTACCTGCTCACGGTATCTTTaGCAGCTGGGACAGGCAGGCGCGGCAGAGACGTCTGGAAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SSVASQTPGTCSRYL*QLGQAGAAETSGSC Trigger: ACAGCTTCCAGACGTCTCTGCCGCGCCTGCCTGTCCCAGCTGTCAAAGATACCGTGAGCAGGTACCTGGAGTCTGTGAGGCCACTGATGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025835.6 ENSMUST00000237938.2 ENSMUST00000238015.2 |
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| CDS GCA 90 bp | CGGTCGATGCCAGCGCCCGTCATGGCGAGGCGGTACAGGTGCTGGTaGTTTTCACAAGCTATCTTGAACAGCTTGAACCTCTGCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSMPAPVMARRYRCW*FSQAILNSLNLCSA Trigger: GGCAGAGCAGAGGTTCAAGCTGTTCAAGATAGCTTGTGAAAAGCACCAGCACCTGTACCGCCTCGCCATGACGGGCGCTGGCATCGACCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| CDS GCA 90 bp | AGGTGGCGGTCGATGCCAGCGCCCGTCATGGCGAGGCGGTACAGGTaGTGGTGCTTTTCACAAGCTATCTTGAACAGCTTGAACCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RWRSMPAPVMARRYR*WCFSQAILNSLNLC Trigger: GCAGAGGTTCAAGCTGTTCAAGATAGCTTGTGAAAAGCACCAGCACCTGTACCGCCTCGCCATGACGGGCGCTGGCATCGACCGCCACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| CDS CCA 90 bp | TTCCAGGAGTGCAGCCCTGACAGGCAGATCTGTTTGAGGGCTTCATaGCTCAGGCGGAGATCGATGCCATCAGGGGTGACTGTGAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: FQECSPDRQICLRAS*LRRRSMPSGVTVNW Trigger: CCAGTTCACAGTCACCCCTGATGGCATCGATCTCCGCCTGAGCCATGAAGCCCTCAAACAGATCTGCCTGTCAGGGCTGCACTCCTGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025835.6 ENSMUST00000237562.2 ENSMUST00000237938.2 ENSMUST00000238015.2 |
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| CDS CCA 90 bp | TGGCGGTCGATGCCAGCGCCCGTCATGGCGAGGCGGTACAGGTGCTaGTGCTTTTCACAAGCTATCTTGAACAGCTTGAACCTCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: WRSMPAPVMARRYRC*CFSQAILNSLNLCS Trigger: AGAGCAGAGGTTCAAGCTGTTCAAGATAGCTTGTGAAAAGCACCAGCACCTGTACCGCCTCGCCATGACGGGCGCTGGCATCGACCGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| CDS CCA 90 bp | CTGGGCCAGTGCTGTCATGCGTTGGAAGTCTCCCTCCTTCATCAGTaGCCTCACAGACTCCAGGTACCTGCTCACGGTATCTTTGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LGQCCHALEVSLLHQ*PHRLQVPAHGIFDS Trigger: GCTGTCAAAGATACCGTGAGCAGGTACCTGGAGTCTGTGAGGCCACTGATGAAGGAGGGAGACTTCCAACGCATGACAGCACTGGCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025835.6 ENSMUST00000237938.2 ENSMUST00000238015.2 |
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| CDS TCA 90 bp | CTTTGCAATCATGCCCAGGGAGGGGTCCACTTTGGTATGCATGGATaGTATCACACCCACCACCACGATAAGCCAGCTGGAGGGACTCGC | + |
|
Preference number: 5 (lower is better) Translates to: LCNHAQGGVHFGMHG*YHTHHHDKPAGGTR Trigger: GCGAGTCCCTCCAGCTGGCTTATCGTGGTGGTGGGTGTGATATCATCCATGCATACCAAAGTGGACCCCTCCCTGGGCATGATTGCAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025835.6 ENSMUST00000237562.2 ENSMUST00000237938.2 ENSMUST00000238015.2 |
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| CDS CCA 90 bp | CAGAGCCCTGTGCCAAAGAGGACGCCACTCACGATGTTCTTCGTCTaGCTTGACATGCGGCCAGTGGTGTCTAGGGTCCGATTGATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: QSPVPKRTPLTMFFV*LDMRPVVSRVRLIF Trigger: AAAGATCAATCGGACCCTAGACACCACTGGCCGCATGTCAAGCCAGACGAAGAACATCGTGAGTGGCGTCCTCTTTGGCACAGGGCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025835.6 ENSMUST00000237562.2 ENSMUST00000237938.2 ENSMUST00000238015.2 |
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| CDS CCA 90 bp | GGTCCAAGGTTGACAGCAAAATCCTGGGCCAGTGCTGTCATGCGTTaGAAGTCTCCCTCCTTCATCAGTGGCCTCACAGACTCCAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GPRLTAKSWASAVMR*KSPSFISGLTDSRY Trigger: GTACCTGGAGTCTGTGAGGCCACTGATGAAGGAGGGAGACTTCCAACGCATGACAGCACTGGCCCAGGATTTTGCTGTCAACCTTGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025835.6 ENSMUST00000237938.2 ENSMUST00000238015.2 |
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| CDS-3UTR CAA 90 bp | GCTTCACATGCTAAGCCTTCTCTATGGCCCCACTTGCCAATGGGCTCCCATCGTTGTTCTTCGTCTGGCTaGACATGCGGCCAGTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: ASHAKPSLWPHLPMGSHRCSSSG*TCGQWC Trigger: ACACCACTGGCCGCATGTCAAGCCAGACGAAGAACA...ACGATGGGAGCCCATTGGCAAGTGGGGCCATAGAGAAGGCTTAGCATGTGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| CDS TCA 90 bp | GTCTCCTCCCCAGGGATGCGGGAAGTATTGAAGAGTCGCTCCCACTaGGCAGAGCAGAGGGGAATTGTAGATCCCAGAAGACGAATAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VSSPGMREVLKSRSH*AEQRGIVDPRRRIG Trigger: ACCTATTCGTCTTCTGGGATCTACAATTCCCCTCTGCTCTGCTCAGTGGGAGCGACTCTTCAATACTTCCCGCATCCCTGGGGAGGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025835.6 ENSMUST00000237938.2 |
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| CDS GCA 90 bp | CATAGCCATCCAGATTCTGGTGCTGCGGCTCATTTTGCCGTGCTCTaGAAACATCCAGCCATGGTAGGAGAGCAGCACCTTCAGCGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: HSHPDSGAAAHFAVL*KHPAMVGEQHLQRV Trigger: TACTCGCTGAAGGTGCTGCTCTCCTACCATGGCTGGATGTTTGCAGAGCACGGCAAAATGAGCCGCAGCACCAGAATCTGGATGGCTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025835.6 ENSMUST00000237562.2 ENSMUST00000237938.2 ENSMUST00000238015.2 |
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| CDS GCA 90 bp | CCACTGCAATTTGGGTCCAAGGTTGACAGCAAAATCCTGGGCCAGTaGTGTCATGCGTTGGAAGTCTCCCTCCTTCATCAGTGGCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: PLQFGSKVDSKILGQ*CHALEVSLLHQWPH Trigger: GTGAGGCCACTGATGAAGGAGGGAGACTTCCAACGCATGACAGCACTGGCCCAGGATTTTGCTGTCAACCTTGGACCCAAATTGCAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025835.6 ENSMUST00000237938.2 ENSMUST00000238015.2 |
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| CDS-3UTR CAA 90 bp | CCCACCCTCACTTCTGTTACAGCTAGCACACGAGTAGGAATCAAGCAAGGCCAACTGCTCACGGTATCTTaGACAGCTGGGACAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PTLTSVTASTRVGIKQGQLLTVS*TAGTGR Trigger: CCTGCCTGTCCCAGCTGTCAAAGATACCGTGAGCAG...TTGGCCTTGCTTGATTCCTACTCGTGTGCTAGCTGTAACAGAAGTGAGGGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| CDS-3UTR CAA 90 bp | TTGATACAACCCCCAAAATCCAGGGATTCACCAGCATTTAAATCCCTTTATCCAGTGAGGGCGGCAAGCTaGGCTTCCCCGGGCTGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LIQPPKSRDSPAFKSLYPVRAAS*ASPGCG Trigger: GCCGCAGCCCGGGGAAGCCAAGCTTGCCGCCCTCAC...TGGATAAAGGGATTTAAATGCTGGTGAATCCCTGGATTTTGGGGGTTGTATCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| CDS-3UTR CAA 90 bp | TTGGCTGCCTGTGTCAGTATGCCTGACTCAGTGACCAGGGTCTCACTCTCCTTGCTCGTCCGGCACTTCTaGATCAAGCCTTTGCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LAACVSMPDSVTRVSLSLLVRHF*IKPLPK Trigger: CTTTGGCAAAGGCTTGATCAAGAAGTGCCGGACGAG...CAAGGAGAGTGAGACCCTGGTCACTGAGTCAGGCATACTGACACAGGCAGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| CDS TCA 90 bp | TTTGGGGATGTTGGGGTTCTTGTCTCCTTTACAGTGTCCATCCTCTaGGTAGCCCAGCTGGAAGACGTCGGTGGCCATGACATACTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: FGDVGVLVSFTVSIL*VAQLEDVGGHDILP Trigger: TGGGAGTATGTCATGGCCACCGACGTCTTCCAGCTGGGCTACTCAGAGGATGGACACTGTAAAGGAGACAAGAACCCCAACATCCCCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| CDS GCA 90 bp | CTCCCACAGATGGCCCACGATGGGCGCGTCCGCCCAGGAATGCTCTaGGTTTATGCCTATCTTGCTGTTTTTGAAGACAACAAAGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LPQMAHDGRVRPGML*VYAYLAVFEDNKGD Trigger: ATCACCTTTGTTGTCTTCAAAAACAGCAAGATAGGCATAAACGCAGAGCATTCCTGGGCGGACGCGCCCATCGTGGGCCATCTGTGGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| CDS CCA 90 bp | TCTCAAAGTCAAACAGTTCCACCTGCTGCTGAGGAGTCTGGCTCGTaGACAACCTCCATGGCTCAGACAGTACCTCCTTCAGGAAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SQSQTVPPAAEESGS*TTSMAQTVPPSGKV Trigger: CACCTTTCCTGAAGGAGGTACTGTCTGAGCCATGGAGGTTGTCCACGAGCCAGACTCCTCAGCAGCAGGTGGAACTGTTTGACTTTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| CDS-3UTR CAA 90 bp | CTCACTCTCCTTGCCAATGGCTGCCACACTCTCCAGCTGGTGTCCAACTTGGTAAATTTGGGTCCAAGGTaGACAGCAAAATCCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LTLLANGCHTLQLVSNLVNLGPR*TAKSWA Trigger: GGCCCAGGATTTTGCTGTCAACCTTGGACCCAAATT...TACCAAGTTGGACACCAGCTGGAGAGTGTGGCAGCCATTGGCAAGGAGAGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| CDS-3UTR CAA 90 bp | TTGGCTGCCTGTGTCAGTATGCCTGACTCAGTGACCAGGGTCTCACTCTCCTTGGGGATGTTGGGGTTCTaGTCTCCTTTACAGTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LAACVSMPDSVTRVSLSLGMLGF*SPLQCP Trigger: TGGACACTGTAAAGGAGACAAGAACCCCAACATCCC...CAAGGAGAGTGAGACCCTGGTCACTGAGTCAGGCATACTGACACAGGCAGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| CDS GCA 90 bp | CGATTGATCTTTGCAATCATGCCCAGGGAGGGGTCCACTTTGGTATaGATGGATGATATCACACCCACCACCACGATAAGCCAGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RLIFAIMPREGSTLV*MDDITPTTTISQLE Trigger: CTCCAGCTGGCTTATCGTGGTGGTGGGTGTGATATCATCCATGCATACCAAAGTGGACCCCTCCCTGGGCATGATTGCAAAGATCAATCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025835.6 ENSMUST00000237562.2 ENSMUST00000237938.2 ENSMUST00000238015.2 |
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| CDS GCA 90 bp | ACATACTCCCACAGATGGCCCACGATGGGCGCGTCCGCCCAGGAATaGTCTGCGTTTATGCCTATCTTGCTGTTTTTGAAGACAACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TYSHRWPTMGASAQE*SAFMPILLFLKTTK Trigger: CTTTGTTGTCTTCAAAAACAGCAAGATAGGCATAAACGCAGAGCATTCCTGGGCGGACGCGCCCATCGTGGGCCATCTGTGGGAGTATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| CDS-3UTR CAA 90 bp | CCCACCCTCACTTCTGTTACAGCTAGCACACGAGTAGGAATCAAGCAAGGCCAACGACCCGAGAAGACCTaGACCATAGCCATCCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: PTLTSVTASTRVGIKQGQRPEKT*TIAIQI Trigger: AATCTGGATGGCTATGGTCAAGGTCTTCTCGGGTCG...TTGGCCTTGCTTGATTCCTACTCGTGTGCTAGCTGTAACAGAAGTGAGGGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| CDS-3UTR CAA 90 bp | GCTAGAGCTGTTACCTCCACTGGCTCTGAAGCCACTTTCTCTTTCCACAAGGTGCAGTGCTGTCATGCGTaGGAAGTCTCCCTCCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: ARAVTSTGSEATFSFHKVQCCHA*EVSLLH Trigger: ATGAAGGAGGGAGACTTCCAACGCATGACAGCACTG...CACCTTGTGGAAAGAGAAAGTGGCTTCAGAGCCAGTGGAGGTAACAGCTCTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| CDS-3UTR CAA 90 bp | CCCACCCTCACTTCTGTTACAGCTAGCACACGAGTAGGAATCAAGCAAGGCCAAATGTGCCTGCTGTCCTaGACGTGTTGGATGGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PTLTSVTASTRVGIKQGQMCLLS*TCWMVS Trigger: AGACACCATCCAACACGTCAAGGACAGCAGGCACAT...TTGGCCTTGCTTGATTCCTACTCGTGTGCTAGCTGTAACAGAAGTGAGGGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| CDS CCA 90 bp | TTCAAATACCACTGCAATTTGGGTCCAAGGTTGACAGCAAAATCCTaGGCCAGTGCTGTCATGCGTTGGAAGTCTCCCTCCTTCATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FKYHCNLGPRLTAKS*ASAVMRWKSPSFIS Trigger: ACTGATGAAGGAGGGAGACTTCCAACGCATGACAGCACTGGCCCAGGATTTTGCTGTCAACCTTGGACCCAAATTGCAGTGGTATTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025835.6 ENSMUST00000237938.2 ENSMUST00000238015.2 |
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| CDS-3UTR CAA 90 bp | TGCTCAGGAGCAGCAAGGAAGGACACTGGAGACCTGAGAGAGGAATGTCACACTGTGATGATGCCATTCTaGAATCGGATGAACTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CSGAARKDTGDLREECHTVMMPF*NRMNFF Trigger: GAAGAAGTTCATCCGATTCAAGAATGGCATCATCAC...AGTGTGACATTCCTCTCTCAGGTCTCCAGTGTCCTTCCTTGCTGCTCCTGAGCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| CDS-3UTR CAA 90 bp | CCCACCCTCACTTCTGTTACAGCTAGCACACGAGTAGGAATCAAGCAAGGCCAAACAAAGGTGATGGACTaGTCAAACCACCTGTCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PTLTSVTASTRVGIKQGQTKVMD*SNHLSK Trigger: TTTCGACAGGTGGTTTGACAAGTCCATCACCTTTGT...TTGGCCTTGCTTGATTCCTACTCGTGTGCTAGCTGTAACAGAAGTGAGGGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| CDS-3UTR CAA 90 bp | GCTTCACATGCTAAGCCTTCTCTATGGCCCCACTTGCCAATGGGCTCCCATCGTGCGTTTATGCCTATCTaGCTGTTTTTGAAGACAACA | + |
|
Preference number: 5 (lower is better) Translates to: ASHAKPSLWPHLPMGSHRAFMPI*LFLKTT Trigger: TGTTGTCTTCAAAAACAGCAAGATAGGCATAAACGC...ACGATGGGAGCCCATTGGCAAGTGGGGCCATAGAGAAGGCTTAGCATGTGAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| CDS-3UTR CAA 90 bp | GTGCCCAATATTCCTGGAGCCAAGGCATCTCTGGATGTAGTAGGGTCACAAGTCTCAGGGCTAGAGAACTaGGAAGAAATATGGAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VPNIPGAKASLDVVGSQVSGLEN*EEIWKW Trigger: CCACTTCCATATTTCTTCCAAGTTCTCTAGCCCTGA...GACTTGTGACCCTACTACATCCAGAGATGCCTTGGCTCCAGGAATATTGGGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| CDS GCA 90 bp | GAAACATCTACCATGCAGCAGAGATTTGGCATAGCTGTCAATAGATaGCTCAGGGTCCTCCTCTCTATATCCCTGTTCCGATTCGTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: ETSTMQQRFGIAVNR*LRVLLSISLFRFVQ Trigger: TTGGACGAATCGGAACAGGGATATAGAGAGGAGGACCCTGAGGCATCTATTGACAGCTATGCCAAATCTCTGCTGCATGGTAGATGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| CDS-3UTR CAA 90 bp | TACCAAACGGAGTTGCTTTACAGTCTATTGGATGTTGTCAAGAAAGGCACTCTCGACAGGCAGATCTGTTaGAGGGCTTCATGGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: YQTELLYSLLDVVKKGTLDRQIC*RASWLR Trigger: CCTGAGCCATGAAGCCCTCAAACAGATCTGCCTGTC...GAGAGTGCCTTTCTTGACAACATCCAATAGACTGTAAAGCAACTCCGTTTGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| CDS-3UTR CAA 90 bp | CGGAGTTGCTTTACAGTCTATTGGATGTTGTCAAGAAAGGCACTCTCACAGAGGAGGGAGGGGTCCACTTaGGTATGCATGGATGATATC | + |
|
Preference number: 5 (lower is better) Translates to: RSCFTVYWMLSRKALSQRREGST*VCMDDI Trigger: GATATCATCCATGCATACCAAAGTGGACCCCTCCCT...CCTCTGTGAGAGTGCCTTTCTTGACAACATCCAATAGACTGTAAAGCAACTCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| CDS-3UTR CAA 90 bp | TACCAAACGGAGTTGCTTTACAGTCTATTGGATGTTGTCAAGAAAGGCACTCTCTGTAGCCTGGTGGGTTaGGGGATGTTGGGGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: YQTELLYSLLDVVKKGTLCSLVG*GMLGFL Trigger: CAAGAACCCCAACATCCCCAAACCCACCAGGCTACA...GAGAGTGCCTTTCTTGACAACATCCAATAGACTGTAAAGCAACTCCGTTTGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| CDS TCA 90 bp | GATAATGTCCATCATGGCTTGTCTCAAGTGCTTCCCAAAGCGGTGTaGGTCTGTCTCAGGGCTAGAGAACTTGGAAGAAATATGGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: DNVHHGLSQVLPKAV*VCLRARELGRNMEV Trigger: CACTTCCATATTTCTTCCAAGTTCTCTAGCCCTGAGACAGACTCACACCGCTTTGGGAAGCACTTGAGACAAGCCATGATGGACATTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| CDS-3UTR CAA 90 bp | TTGATACAACCCCCAAAATCCAGGGATTCACCAGCATTTAAATCCCTTTATCCAGCTGTCCTTGACGTGTaGGATGGTGTCTGTCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LIQPPKSRDSPAFKSLYPAVLDV*DGVCLL Trigger: GAGGAGACAGACACCATCCAACACGTCAAGGACAGC...TGGATAAAGGGATTTAAATGCTGGTGAATCCCTGGATTTTGGGGGTTGTATCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR CAA 90 bp | CGGAGTTGCTTTACAGTCTATTGGATGTTGTCAAGAAAGGCACTCTCACAGAGGAATGTCCATCATGGCTaGTCTCAAGTGCTTCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RSCFTVYWMLSRKALSQRNVHHG*SQVLPK Trigger: TTTGGGAAGCACTTGAGACAAGCCATGATGGACATT...CCTCTGTGAGAGTGCCTTTCTTGACAACATCCAATAGACTGTAAAGCAACTCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| CDS-3UTR CAA 90 bp | TTTTCTGCCTGTCCTATGGTCAGGAGCAACACCTATTCATTTGGTTTGTATCACAGAAGACGAATAGGTTaGAGTTCCTCACGGTCTACC | + |
|
Preference number: 5 (lower is better) Translates to: FSACPMVRSNTYSFGLYHRRRIG*SSSRST Trigger: GGTAGACCGTGAGGAACTCAAACCTATTCGTCTTCT...GTGATACAAACCAAATGAATAGGTGTTGCTCCTGACCATAGGACAGGCAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| CDS-3UTR CAA 90 bp | TTTTCTGCCTGTCCTATGGTCAGGAGCAACACCTATTCATTTGGTTTGTATCACTTTTCACAAGCTATCTaGAACAGCTTGAACCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FSACPMVRSNTYSFGLYHFSQAI*NSLNLC Trigger: GCAGAGGTTCAAGCTGTTCAAGATAGCTTGTGAAAA...GTGATACAAACCAAATGAATAGGTGTTGCTCCTGACCATAGGACAGGCAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS-3UTR CAA 90 bp | TTCCACATTAAATACATAGTAGTCTTACCTCCTCCTTTGAACACTTACAGTGAAGCTATCTTGAACAGCTaGAACCTCTGCTCTGCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: FHIKYIVVLPPPLNTYSEAILNS*NLCSAV Trigger: AACGGCAGAGCAGAGGTTCAAGCTGTTCAAGATAGC...TTCACTGTAAGTGTTCAAAGGAGGAGGTAAGACTACTATGTATTTAATGTGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS TCA 72 bp | GCCGACACTTCGCCCAGGGCACTCTGTCTGCGGCAGTaGGGGCGGCAAGCTTGGCTTCCCCGGGCTGCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: ADTSPRALCLRQ*GRQAWLPRAAA Trigger: AGCCGCAGCCCGGGGAAGCCAAGCTTGCCGCCCTCACTGCCGCAGACAGAGTGCCCTGGGCGAAGTGTCGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025835.6 ENSMUST00000237938.2 |
||
| CDS CAA 72 bp | CAGGGCACTCTGTCTGCGGCAGTGAGGGCGGCAAGCTaGGCTTCCCCGGGCTGCGGCTCTGAGGTGTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: QGTLSAAVRAAS*ASPGCGSEVSS Trigger: GGATGACACCTCAGAGCCGCAGCCCGGGGAAGCCAAGCTTGCCGCCCTCACTGCCGCAGACAGAGTGCCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025835.6 ENSMUST00000237938.2 |
||
| CDS GCA 72 bp | GCGGCAGTGAGGGCGGCAAGCTTGGCTTCCCCGGGCTaGGGCTCTGAGGTGTCATCCAGGATCTGCTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: AAVRAASLASPG*GSEVSSRICCI Trigger: GATGCAGCAGATCCTGGATGACACCTCAGAGCCGCAGCCCGGGGAAGCCAAGCTTGCCGCCCTCACTGCCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025835.6 ENSMUST00000237938.2 |
||
| CDS GCA 72 bp | TGCGGCTCTGAGGTGTCATCCAGGATCTGCTGCATCTaGTGCTCCAGCTCACGGGGCCTCAGCAGCCTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: CGSEVSSRICCI*CSSSRGLSSLP Trigger: CGGGAGGCTGCTGAGGCCCCGTGAGCTGGAGCAGCAGATGCAGCAGATCCTGGATGACACCTCAGAGCCGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025835.6 ENSMUST00000237938.2 |
||
| CDS TCA 72 bp | CCTCTGAGTAGCCCAGCTGGAAGACGTCGGTGGCCATaGCATACTCCCACAGATGGCCCACGATGGGCGCGT | + |
|
Preference number: 6 (lower is better) Translates to: PLSSPAGRRRWP*HTPTDGPRWAR Trigger: ACGCGCCCATCGTGGGCCATCTGTGGGAGTATGTCATGGCCACCGACGTCTTCCAGCTGGGCTACTCAGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS CAA 72 bp | GGCCTCACAGACTCCAGGTACCTGCTCACGGTATCTTaGACAGCTGGGACAGGCAGGCGCGGCAGAGACGTC | + |
|
Preference number: 6 (lower is better) Translates to: GLTDSRYLLTVS*TAGTGRRGRDV Trigger: GACGTCTCTGCCGCGCCTGCCTGTCCCAGCTGTCAAAGATACCGTGAGCAGGTACCTGGAGTCTGTGAGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025835.6 ENSMUST00000237938.2 ENSMUST00000238015.2 |
||
| CDS CAA 72 bp | CGGCCTCTGTGGTACACGACAATGTGCCTGCTGTCCTaGACGTGTTGGATGGTGTCTGTCTCCTCCCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RPLWYTTMCLLS*TCWMVSVSSPG Trigger: CCCTGGGGAGGAGACAGACACCATCCAACACGTCAAGGACAGCAGGCACATTGTCGTGTACCACAGAGGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025835.6 ENSMUST00000237938.2 |
||
| CDS TCA 72 bp | TGGTGTCTGTCTCCTCCCCAGGGATGCGGGAAGTATTaGAGAGTCGCTCCCACTGAGCAGAGCAGAGGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: WCLSPPQGCGKY*RVAPTEQSRGE Trigger: TTCCCCTCTGCTCTGCTCAGTGGGAGCGACTCTTCAATACTTCCCGCATCCCTGGGGAGGAGACAGACACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025835.6 ENSMUST00000237938.2 |
||
| CDS TCA 72 bp | GGCCTCTGTGGTACACGACAATGTGCCTGCTGTCCTTaGCGTGTTGGATGGTGTCTGTCTCCTCCCCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GLCGTRQCACCP*RVGWCLSPPQG Trigger: TCCCTGGGGAGGAGACAGACACCATCCAACACGTCAAGGACAGCAGGCACATTGTCGTGTACCACAGAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025835.6 ENSMUST00000237938.2 |
||
| CDS TCA 72 bp | GCCTCAGCAGCCTCCCGTCATGGTAGAGCCAGACCTTaGAGTAACGGCCTCTGTGGTACACGACAATGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: ASAASRHGRARP*SNGLCGTRQCA Trigger: GGCACATTGTCGTGTACCACAGAGGCCGTTACTTCAAGGTCTGGCTCTACCATGACGGGAGGCTGCTGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025835.6 ENSMUST00000237938.2 |
||
| CDS GCA 72 bp | GAACTTGCCCATGTCCTTGTAATGTGCGAGCTGCAGTaGCAGCTGGATGAAGGCATCGGGACTCGTCCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: ELAHVLVMCELQ*QLDEGIGTRPA Trigger: TGCCGGACGAGTCCCGATGCCTTCATCCAGCTGGCACTGCAGCTCGCACATTACAAGGACATGGGCAAGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS CCA 72 bp | TGCAGCCCTGACAGGCAGATCTGTTTGAGGGCTTCATaGCTCAGGCGGAGATCGATGCCATCAGGGGTGACT | + |
|
Preference number: 6 (lower is better) Translates to: CSPDRQICLRAS*LRRRSMPSGVT Trigger: AGTCACCCCTGATGGCATCGATCTCCGCCTGAGCCATGAAGCCCTCAAACAGATCTGCCTGTCAGGGCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025835.6 ENSMUST00000237562.2 ENSMUST00000237938.2 ENSMUST00000238015.2 |
||
| CDS CCA 72 bp | GTGCCAAAGAGGACGCCACTCACGATGTTCTTCGTCTaGCTTGACATGCGGCCAGTGGTGTCTAGGGTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: VPKRTPLTMFFV*LDMRPVVSRVR Trigger: TCGGACCCTAGACACCACTGGCCGCATGTCAAGCCAGACGAAGAACATCGTGAGTGGCGTCCTCTTTGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025835.6 ENSMUST00000237562.2 ENSMUST00000237938.2 ENSMUST00000238015.2 |
||
| CDS CCA 72 bp | GGTCTACCGTGCGACGATACAGCAGTATGGCGTGGATaGTGTTGCCAGCTCTCGCTGCCTGAATATGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GLPCDDTAVWRG*CCQLSLPEYGL Trigger: CAACCCATATTCAGGCAGCGAGAGCTGGCAACACCATCCACGCCATACTGCTGTATCGTCGCACGGTAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025835.6 ENSMUST00000237938.2 |
||
| CDS CCA 72 bp | TGGTACACGACAATGTGCCTGCTGTCCTTGACGTGTTaGATGGTGTCTGTCTCCTCCCCAGGGATGCGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: WYTTMCLLSLTC*MVSVSSPGMRE Trigger: TTCCCGCATCCCTGGGGAGGAGACAGACACCATCCAACACGTCAAGGACAGCAGGCACATTGTCGTGTACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025835.6 ENSMUST00000237938.2 |
||
| CDS CAA 90 bp | GGGTCCAAGGTTGACAGCAAAATCCTGGGCCAGTGCTGTCATGCGTaGGAAGTCTCCCTCCTTCATCAGTGGCCTCACAGACTCCAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: GSKVDSKILGQCCHA*EVSLLHQWPHRLQV Trigger: TACCTGGAGTCTGTGAGGCCACTGATGAAGGAGGGAGACTTCCAACGCATGACAGCACTGGCCCAGGATTTTGCTGTCAACCTTGGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025835.6 ENSMUST00000237938.2 ENSMUST00000238015.2 |
||
| CDS TCA 72 bp | CATGCCCAGGGAGGGGTCCACTTTGGTATGCATGGATaGTATCACACCCACCACCACGATAAGCCAGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: HAQGGVHFGMHG*YHTHHHDKPAG Trigger: TCCAGCTGGCTTATCGTGGTGGTGGGTGTGATATCATCCATGCATACCAAAGTGGACCCCTCCCTGGGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025835.6 ENSMUST00000237562.2 ENSMUST00000237938.2 ENSMUST00000238015.2 |
||
| CDS TCA 72 bp | GTTGGGGTTCTTGTCTCCTTTACAGTGTCCATCCTCTaGGTAGCCCAGCTGGAAGACGTCGGTGGCCATGAC | + |
|
Preference number: 6 (lower is better) Translates to: VGVLVSFTVSIL*VAQLEDVGGHD Trigger: GTCATGGCCACCGACGTCTTCCAGCTGGGCTACTCAGAGGATGGACACTGTAAAGGAGACAAGAACCCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS GCA 72 bp | CCAGATTCTGGTGCTGCGGCTCATTTTGCCGTGCTCTaGAAACATCCAGCCATGGTAGGAGAGCAGCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: PDSGAAAHFAVL*KHPAMVGEQHL Trigger: AAGGTGCTGCTCTCCTACCATGGCTGGATGTTTGCAGAGCACGGCAAAATGAGCCGCAGCACCAGAATCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025835.6 ENSMUST00000237562.2 ENSMUST00000237938.2 ENSMUST00000238015.2 |
||
| CDS GCA 72 bp | CAGCAGTATGGCGTGGATGGTGTTGCCAGCTCTCGCTaGCTGAATATGGGTTGGGGTGATGTAGAGCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: QQYGVDGVASSR*LNMGWGDVEHL Trigger: GAGATGCTCTACATCACCCCAACCCATATTCAGGCAGCGAGAGCTGGCAACACCATCCACGCCATACTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025835.6 ENSMUST00000237938.2 |
||
| CDS GCA 72 bp | CACAGATGGCCCACGATGGGCGCGTCCGCCCAGGAATaGTCTGCGTTTATGCCTATCTTGCTGTTTTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: HRWPTMGASAQE*SAFMPILLFLK Trigger: CTTCAAAAACAGCAAGATAGGCATAAACGCAGAGCATTCCTGGGCGGACGCGCCCATCGTGGGCCATCTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS CCA 72 bp | TGCTGTCATGCGTTGGAAGTCTCCCTCCTTCATCAGTaGCCTCACAGACTCCAGGTACCTGCTCACGGTATC | + |
|
Preference number: 6 (lower is better) Translates to: CCHALEVSLLHQ*PHRLQVPAHGI Trigger: GATACCGTGAGCAGGTACCTGGAGTCTGTGAGGCCACTGATGAAGGAGGGAGACTTCCAACGCATGACAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025835.6 ENSMUST00000237938.2 ENSMUST00000238015.2 |
||
| CDS CCA 72 bp | CAAACAGTTCCACCTGCTGCTGAGGAGTCTGGCTCGTaGACAACCTCCATGGCTCAGACAGTACCTCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: QTVPPAAEESGS*TTSMAQTVPPS Trigger: TGAAGGAGGTACTGTCTGAGCCATGGAGGTTGTCCACGAGCCAGACTCCTCAGCAGCAGGTGGAACTGTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS CAA 90 bp | GTCATGGCGAGGCGGTACAGGTGCTGGTGCTTTTCACAAGCTATCTaGAACAGCTTGAACCTCTGCTCTGCCGTTGTTGTGGGGTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: VMARRYRCWCFSQAI*NSLNLCSAVVVGSI Trigger: GATGGACCCCACAACAACGGCAGAGCAGAGGTTCAAGCTGTTCAAGATAGCTTGTGAAAAGCACCAGCACCTGTACCGCCTCGCCATGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS GCA 72 bp | ATGGCCCACGATGGGCGCGTCCGCCCAGGAATGCTCTaGGTTTATGCCTATCTTGCTGTTTTTGAAGACAAC | + |
|
Preference number: 6 (lower is better) Translates to: MAHDGRVRPGML*VYAYLAVFEDN Trigger: GTTGTCTTCAAAAACAGCAAGATAGGCATAAACGCAGAGCATTCCTGGGCGGACGCGCCCATCGTGGGCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS CCA 72 bp | TTGACAGCAAAATCCTGGGCCAGTGCTGTCATGCGTTaGAAGTCTCCCTCCTTCATCAGTGGCCTCACAGAC | + |
|
Preference number: 6 (lower is better) Translates to: LTAKSWASAVMR*KSPSFISGLTD Trigger: GTCTGTGAGGCCACTGATGAAGGAGGGAGACTTCCAACGCATGACAGCACTGGCCCAGGATTTTGCTGTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025835.6 ENSMUST00000237938.2 ENSMUST00000238015.2 |
||
| CDS CCA 72 bp | CACTGCAATTTGGGTCCAAGGTTGACAGCAAAATCCTaGGCCAGTGCTGTCATGCGTTGGAAGTCTCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: HCNLGPRLTAKS*ASAVMRWKSPS Trigger: GGAGGGAGACTTCCAACGCATGACAGCACTGGCCCAGGATTTTGCTGTCAACCTTGGACCCAAATTGCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025835.6 ENSMUST00000237938.2 ENSMUST00000238015.2 |
||
| CDS CAA 72 bp | GTTGACAGCAAAATCCTGGGCCAGTGCTGTCATGCGTaGGAAGTCTCCCTCCTTCATCAGTGGCCTCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: VDSKILGQCCHA*EVSLLHQWPHR Trigger: TCTGTGAGGCCACTGATGAAGGAGGGAGACTTCCAACGCATGACAGCACTGGCCCAGGATTTTGCTGTCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025835.6 ENSMUST00000237938.2 ENSMUST00000238015.2 |
||
| CDS TCA 72 bp | GAATCGGATGAACTTCTTCTTCCAGGAGTGCAGCCCTaGCAGGCAGATCTGTTTGAGGGCTTCATGGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: ESDELLLPGVQP*QADLFEGFMAQ Trigger: CTGAGCCATGAAGCCCTCAAACAGATCTGCCTGTCAGGGCTGCACTCCTGGAAGAAGAAGTTCATCCGATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025835.6 ENSMUST00000237562.2 ENSMUST00000237938.2 ENSMUST00000238015.2 |
||
| CDS TCA 72 bp | TGTTGCCAGCTCTCGCTGCCTGAATATGGGTTGGGGTaGTGTAGAGCATCTCCATGGCGTAGTAGTTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: CCQLSLPEYGLG*CRASPWRSSCC Trigger: ACAGCAACTACTACGCCATGGAGATGCTCTACATCACCCCAACCCATATTCAGGCAGCGAGAGCTGGCAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025835.6 ENSMUST00000237938.2 |
||
| CDS TCA 72 bp | CCTCCATGGCTCAGACAGTACCTCCTTCAGGAAAGGTaGGTCGACTGCCAGATACTTGGACACCACATAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PPWLRQYLLQER*VDCQILGHHIE Trigger: CTCTATGTGGTGTCCAAGTATCTGGCAGTCGACTCACCTTTCCTGAAGGAGGTACTGTCTGAGCCATGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS GCA 72 bp | TTTGGGTCCAAGGTTGACAGCAAAATCCTGGGCCAGTaGTGTCATGCGTTGGAAGTCTCCCTCCTTCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: FGSKVDSKILGQ*CHALEVSLLHQ Trigger: CTGATGAAGGAGGGAGACTTCCAACGCATGACAGCACTGGCCCAGGATTTTGCTGTCAACCTTGGACCCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025835.6 ENSMUST00000237938.2 ENSMUST00000238015.2 |
||
| CDS CAA 72 bp | GGAATGTCCCACTGTAGCCTGGTGGGTTTGGGGATGTaGGGGTTCTTGTCTCCTTTACAGTGTCCATCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GMSHCSLVGLGM*GFLSPLQCPSS Trigger: AGAGGATGGACACTGTAAAGGAGACAAGAACCCCAACATCCCCAAACCCACCAGGCTACAGTGGGACATTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS CAA 72 bp | AGCTGGATGAAGGCATCGGGACTCGTCCGGCACTTCTaGATCAAGCCTTTGCCAAAGGTGTCAAATGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SWMKASGLVRHF*IKPLPKVSNGK Trigger: CTTCCCATTTGACACCTTTGGCAAAGGCTTGATCAAGAAGTGCCGGACGAGTCCCGATGCCTTCATCCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS CAA 90 bp | AGGGTCCGATTGATCTTTGCAATCATGCCCAGGGAGGGGTCCACTTaGGTATGCATGGATGATATCACACCCACCACCACGATAAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RVRLIFAIMPREGST*VCMDDITPTTTISQ Trigger: CTGGCTTATCGTGGTGGTGGGTGTGATATCATCCATGCATACCAAAGTGGACCCCTCCCTGGGCATGATTGCAAAGATCAATCGGACCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025835.6 ENSMUST00000237562.2 ENSMUST00000237938.2 ENSMUST00000238015.2 |
||
| CDS GCA 72 bp | TTTGCAATCATGCCCAGGGAGGGGTCCACTTTGGTATaGATGGATGATATCACACCCACCACCACGATAAGC | + |
|
Preference number: 6 (lower is better) Translates to: FAIMPREGSTLV*MDDITPTTTIS Trigger: GCTTATCGTGGTGGTGGGTGTGATATCATCCATGCATACCAAAGTGGACCCCTCCCTGGGCATGATTGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025835.6 ENSMUST00000237562.2 ENSMUST00000237938.2 ENSMUST00000238015.2 |
||
| CDS GCA 72 bp | TGCTTTTCACAAGCTATCTTGAACAGCTTGAACCTCTaGTCTGCCGTTGTTGTGGGGTCCATCATGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CFSQAILNSLNL*SAVVVGSIMAS Trigger: GCTGGCCATGATGGACCCCACAACAACGGCAGAGCAGAGGTTCAAGCTGTTCAAGATAGCTTGTGAAAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS CAA 72 bp | TTGATCTTTGCAATCATGCCCAGGGAGGGGTCCACTTaGGTATGCATGGATGATATCACACCCACCACCACG | + |
|
Preference number: 6 (lower is better) Translates to: LIFAIMPREGST*VCMDDITPTTT Trigger: CGTGGTGGTGGGTGTGATATCATCCATGCATACCAAAGTGGACCCCTCCCTGGGCATGATTGCAAAGATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025835.6 ENSMUST00000237562.2 ENSMUST00000237938.2 ENSMUST00000238015.2 |
||
| CDS CAA 72 bp | AGGTGCTGGTGCTTTTCACAAGCTATCTTGAACAGCTaGAACCTCTGCTCTGCCGTTGTTGTGGGGTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: RCWCFSQAILNS*NLCSAVVVGSI Trigger: GATGGACCCCACAACAACGGCAGAGCAGAGGTTCAAGCTGTTCAAGATAGCTTGTGAAAAGCACCAGCACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS CAA 72 bp | AGGCGGTACAGGTGCTGGTGCTTTTCACAAGCTATCTaGAACAGCTTGAACCTCTGCTCTGCCGTTGTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: RRYRCWCFSQAI*NSLNLCSAVVV Trigger: CACAACAACGGCAGAGCAGAGGTTCAAGCTGTTCAAGATAGCTTGTGAAAAGCACCAGCACCTGTACCGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS GCA 72 bp | ACCATGCAGCAGAGATTTGGCATAGCTGTCAATAGATaGCTCAGGGTCCTCCTCTCTATATCCCTGTTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: TMQQRFGIAVNR*LRVLLSISLFR Trigger: TCGGAACAGGGATATAGAGAGGAGGACCCTGAGGCATCTATTGACAGCTATGCCAAATCTCTGCTGCATGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS GCA 72 bp | TTCACAAGCTATCTTGAACAGCTTGAACCTCTGCTCTaGCGTTGTTGTGGGGTCCATCATGGCCAGCACAAA | + |
|
Preference number: 6 (lower is better) Translates to: FTSYLEQLEPLL*RCCGVHHGQHK Trigger: TTTGTGCTGGCCATGATGGACCCCACAACAACGGCAGAGCAGAGGTTCAAGCTGTTCAAGATAGCTTGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS TCA 72 bp | CATCATGGCTTGTCTCAAGTGCTTCCCAAAGCGGTGTaGGTCTGTCTCAGGGCTAGAGAACTTGGAAGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: HHGLSQVLPKAV*VCLRARELGRN Trigger: ATTTCTTCCAAGTTCTCTAGCCCTGAGACAGACTCACACCGCTTTGGGAAGCACTTGAGACAAGCCATGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS CAA 72 bp | GCCCACCAGGATTTTAGCTTCAAATACCACTGCAATTaGGGTCCAAGGTTGACAGCAAAATCCTGGGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: AHQDFSFKYHCN*GPRLTAKSWAS Trigger: ACTGGCCCAGGATTTTGCTGTCAACCTTGGACCCAAATTGCAGTGGTATTTGAAGCTAAAATCCTGGTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025835.6 ENSMUST00000237938.2 ENSMUST00000238015.2 |
||
| CDS CAA 72 bp | GCGTCCGCCCAGGAATGCTCTGCGTTTATGCCTATCTaGCTGTTTTTGAAGACAACAAAGGTGATGGACTTG | + |
|
Preference number: 6 (lower is better) Translates to: ASAQECSAFMPI*LFLKTTKVMDL Trigger: CAAGTCCATCACCTTTGTTGTCTTCAAAAACAGCAAGATAGGCATAAACGCAGAGCATTCCTGGGCGGACGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS CAA 72 bp | CCAAAGCGGTGTGAGTCTGTCTCAGGGCTAGAGAACTaGGAAGAAATATGGAAGTGGATGAAATTCTCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PKRCESVSGLEN*EEIWKWMKFSP Trigger: GGGAGAGAATTTCATCCACTTCCATATTTCTTCCAAGTTCTCTAGCCCTGAGACAGACTCACACCGCTTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS GCA 72 bp | TCCCTGTTCCGATTCGTCCAACGTCACGAAGAATGCTaGCTTTTCTACCGCATCCAGAGATTGCTTATTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SLFRFVQRHEEC*LFYRIQRLLIF Trigger: AAAAATAAGCAATCTCTGGATGCGGTAGAAAAGGCAGCATTCTTCGTGACGTTGGACGAATCGGAACAGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
||
| CDS CAA 90 bp | AAGTGCTTCCCAAAGCGGTGTGAGTCTGTCTCAGGGCTAGAGAACTaGGAAGAAATATGGAAGTGGATGAAATTCTCTCCCACAATAATG | + |
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Preference number: 6 (lower is better) Translates to: KCFPKRCESVSGLEN*EEIWKWMKFSPTIM Trigger: CATTATTGTGGGAGAGAATTTCATCCACTTCCATATTTCTTCCAAGTTCTCTAGCCCTGAGACAGACTCACACCGCTTTGGGAAGCACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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| CDS CCA 72 bp | GCACTTCTTGATCAAGCCTTTGCCAAAGGTGTCAAATaGGAAGGAATGCAGGTCCACATCATTTGCCAAAAA | + |
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Preference number: 6 (lower is better) Translates to: ALLDQAFAKGVK*EGMQVHIICQK Trigger: TTTTTGGCAAATGATGTGGACCTGCATTCCTTCCCATTTGACACCTTTGGCAAAGGCTTGATCAAGAAGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025835.6 |
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