Pregenerated sensors for CPSF7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034820Ensembl transcript IDs: ENSMUST00000038379.5, ENSMUST00000235674.2, ENSMUST00000236206.2, ENSMUST00000236706.2, ENSMUST00000237321.2, ENSMUST00000238102.2
Found 245 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTATTCCCCCTCTTGGGACTCGGACGCACTCACGTTTCCGAGCCTaGGCCTCAAACTGTGACAAGTTCTGCCGGGTGGCCGGCCTCACA | + |
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Preference number: 1 (lower is better) Translates to: GIPPLGTRTHSRFRA*ASNCDKFCRVAGLT Trigger: TGTGAGGCCGGCCACCCGGCAGAACTTGTCACAGTTTGAGGCTCAGGCTCGGAAACGTGAGTGCGTCCGAGTCCCAAGAGGGGGAATACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
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| 3UTR TCA 90 bp | GGGGAGGTACAGCCAGATGAGGAGGTAATCGAGGAGGAGGGGGCATaGGATGCTGGTAGTGGATACCAGGAGGAGGAGGAGGGACACCAA | + |
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Preference number: 1 (lower is better) Translates to: GEVQPDEEVIEEEGA*DAGSGYQEEEEGHQ Trigger: TTGGTGTCCCTCCTCCTCCTCCTGGTATCCACTACCAGCATCTCATGCCCCCTCCTCCTCGATTACCTCCTCATCTGGCTGTACCTCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
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| 3UTR TCA 90 bp | TGGGACTCGGACGCACTCACGTTTCCGAGCCTGAGCCTCAAACTGTaGCAAGTTCTGCCGGGTGGCCGGCCTCACATCTACTTTTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: WDSDALTFPSLSLKL*QVLPGGRPHIYFFS Trigger: GGAGAAAAAGTAGATGTGAGGCCGGCCACCCGGCAGAACTTGTCACAGTTTGAGGCTCAGGCTCGGAAACGTGAGTGCGTCCGAGTCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
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| 3UTR TCA 90 bp | GTGGGCCCGTGGAGGTATTCGTTTCCGAGCCTGAGCCTCAAACTGTaGCAAGTTCTGCCGGGTGGCCGGCCTCACATCTACTTTTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: VGPWRYSFPSLSLKL*QVLPGGRPHIYFFS Trigger: GGAGAAAAAGTAGATGTGAGGCCGGCCACCCGGCAGAACTTGTCACAGTTTGAGGCTCAGGCTCGGAAACGAATACCTCCACGGGCCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000236706.2 ENSMUST00000238102.2 |
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| 3UTR TCA 90 bp | GAGCTCCCACTGGCACCCACACTGTATGACTTGGCCTCTATGCCATaGAGACAGTCCTTAAGAGAGGAGATGAGGACCCGGCAACGCTCA | + |
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Preference number: 1 (lower is better) Translates to: ELPLAPTLYDLASMP*RQSLREEMRTRQRS Trigger: TGAGCGTTGCCGGGTCCTCATCTCCTCTCTTAAGGACTGTCTTCATGGCATAGAGGCCAAGTCATACAGTGTGGGTGCCAGTGGGAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
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| 3UTR CCA 90 bp | TGCCTGGAGGAAGTTAGGGATTTGGAAGAAGGGGAAGGGGTGGAGTaGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAAGTC | + |
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Preference number: 1 (lower is better) Translates to: CLEEVRDLEEGEGVE*PPSFSPDQGEEMQV Trigger: GACTTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCACTCCACCCCTTCCCCTTCTTCCAAATCCCTAACTTCCTCCAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| 3UTR CCA 90 bp | GCTGGCCTAGGCTTCTGGCAGATAGCAACCTCCCGGGTTCTGCTTTaGAGGAACAAGTCCACTGAGGAGTCAGACAGCAAGGAGTCAAAA | + |
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Preference number: 1 (lower is better) Translates to: AGLGFWQIATSRVLL*RNKSTEESDSKESK Trigger: TTTTGACTCCTTGCTGTCTGACTCCTCAGTGGACTTGTTCCTCCAAAGCAGAACCCGGGAGGTTGCTATCTGCCAGAAGCCTAGGCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| 3UTR CCA 90 bp | CAGGTTTCCTTGGACAAAGCACCATTCTCTGTGGAGTCTATGGGCTaGACATGTTGCTCTCTTCCTGTCTGCCCTCATTTCCTACCCCAG | + |
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Preference number: 1 (lower is better) Translates to: QVSLDKAPFSVESMG*TCCSLPVCPHFLPQ Trigger: CTGGGGTAGGAAATGAGGGCAGACAGGAAGAGAGCAACATGTCCAGCCCATAGACTCCACAGAGAATGGTGCTTTGTCCAAGGAAACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| 3UTR CCA 90 bp | GGCAATCAGAAACTCAGGTTTCCTTGGACAAAGCACCATTCTCTGTaGAGTCTATGGGCTGGACATGTTGCTCTCTTCCTGTCTGCCCTC | + |
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Preference number: 1 (lower is better) Translates to: GNQKLRFPWTKHHSL*SLWAGHVALFLSAL Trigger: GAGGGCAGACAGGAAGAGAGCAACATGTCCAGCCCATAGACTCCACAGAGAATGGTGCTTTGTCCAAGGAAACCTGAGTTTCTGATTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| 3UTR TCA 90 bp | CCGATGTCTTTTCCTAGAAGAGCTCCCACTGGCACCCACACTGTATaGCTTGGCCTCTATGCCATGAAGACAGTCCTTAAGAGAGGAGAT | + |
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Preference number: 1 (lower is better) Translates to: PMSFPRRAPTGTHTV*LGLYAMKTVLKRGD Trigger: ATCTCCTCTCTTAAGGACTGTCTTCATGGCATAGAGGCCAAGTCATACAGTGTGGGTGCCAGTGGGAGCTCTTCTAGGAAAAGACATCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
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| 3UTR GCA 90 bp | TTGGACAAAGCACCATTCTCTGTGGAGTCTATGGGCTGGACATGTTaGTCTCTTCCTGTCTGCCCTCATTTCCTACCCCAGCAAGTCTTT | + |
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Preference number: 1 (lower is better) Translates to: LDKAPFSVESMGWTC*SLPVCPHFLPQQVF Trigger: AAAGACTTGCTGGGGTAGGAAATGAGGGCAGACAGGAAGAGAGCAACATGTCCAGCCCATAGACTCCACAGAGAATGGTGCTTTGTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| 3UTR TCA 90 bp | TGCTTGTGCAGAAAATGGCCACCAGTGTGCTGGTCCTTACAACTCTaGGCTGAGTTCACTAAAGTCTGGCTCCAATTCTTCTCTGCTCCT | + |
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Preference number: 1 (lower is better) Translates to: CLCRKWPPVCWSLQL*AEFTKVWLQFFSAP Trigger: AGGAGCAGAGAAGAATTGGAGCCAGACTTTAGTGAACTCAGCTCAGAGTTGTAAGGACCAGCACACTGGTGGCCATTTTCTGCACAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| 3UTR CCA 90 bp | CTCTGGGAAGGAAGTTTTCTCAGTATCCTCACTACTGACTGCTCCTaGGCAATCAGAAACTCAGGTTTCCTTGGACAAAGCACCATTCTC | + |
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Preference number: 1 (lower is better) Translates to: LWEGSFLSILTTDCS*AIRNSGFLGQSTIL Trigger: GAGAATGGTGCTTTGTCCAAGGAAACCTGAGTTTCTGATTGCCCAGGAGCAGTCAGTAGTGAGGATACTGAGAAAACTTCCTTCCCAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| 3UTR CCA 90 bp | CAGATGCATGCAGAAGGAACATCACCCTATGGTACTCCAGGACTGTaGCTACCTCTATCAGGAGCAACCTATAACAATTGGGATGCTGAA | + |
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Preference number: 1 (lower is better) Translates to: QMHAEGTSPYGTPGL*LPLSGATYNNWDAE Trigger: TTCAGCATCCCAATTGTTATAGGTTGCTCCTGATAGAGGTAGCCACAGTCCTGGAGTACCATAGGGTGATGTTCCTTCTGCATGCATCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| 3UTR GCA 90 bp | CATTTTCTCTGGGAAGGAAGTTTTCTCAGTATCCTCACTACTGACTaGTCCTGGGCAATCAGAAACTCAGGTTTCCTTGGACAAAGCACC | + |
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Preference number: 1 (lower is better) Translates to: HFLWEGSFLSILTTD*SWAIRNSGFLGQST Trigger: GGTGCTTTGTCCAAGGAAACCTGAGTTTCTGATTGCCCAGGAGCAGTCAGTAGTGAGGATACTGAGAAAACTTCCTTCCCAGAGAAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| 3UTR TCA 90 bp | GATCCATTTTCTCTGGGAAGGAAGTTTTCTCAGTATCCTCACTACTaGCTGCTCCTGGGCAATCAGAAACTCAGGTTTCCTTGGACAAAG | + |
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Preference number: 1 (lower is better) Translates to: DPFSLGRKFSQYPHY*LLLGNQKLRFPWTK Trigger: CTTTGTCCAAGGAAACCTGAGTTTCTGATTGCCCAGGAGCAGTCAGTAGTGAGGATACTGAGAAAACTTCCTTCCCAGAGAAAATGGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| 3UTR CCA 90 bp | TCCAAAAAGGCAGTACCTTCCTCTAAAACAAGGAAGAAGCCTTCTTaGGGAGAAGGATTCCATGTTAAATGGAAAGCCTCAGGGAAAGGA | + |
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Preference number: 1 (lower is better) Translates to: SKKAVPSSKTRKKPS*GEGFHVKWKASGKG Trigger: TCCTTTCCCTGAGGCTTTCCATTTAACATGGAATCCTTCTCCCCAAGAAGGCTTCTTCCTTGTTTTAGAGGAAGGTACTGCCTTTTTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| 3UTR TCA 90 bp | AATATGCAAGCCTATGCTTACATCAAACCTGAAAAAGAGCCCATGTaGGTAGGCTACATACTGCTCAAATTGCTTTCTTCCCCACATTTC | + |
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Preference number: 1 (lower is better) Translates to: NMQAYAYIKPEKEPM*VGYILLKLLSSPHF Trigger: GAAATGTGGGGAAGAAAGCAATTTGAGCAGTATGTAGCCTACTCACATGGGCTCTTTTTCAGGTTTGATGTAAGCATAGGCTTGCATATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| 3UTR TCA 90 bp | AAGTATGTACCTTGGGAATATGCAAGCCTATGCTTACATCAAACCTaGAAAAGAGCCCATGTGAGTAGGCTACATACTGCTCAAATTGCT | + |
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Preference number: 1 (lower is better) Translates to: KYVPWEYASLCLHQT*KRAHVSRLHTAQIA Trigger: AGCAATTTGAGCAGTATGTAGCCTACTCACATGGGCTCTTTTTCAGGTTTGATGTAAGCATAGGCTTGCATATTCCCAAGGTACATACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGCCTCCTGCTACTCTCCCGGGACCGGCTGGGTGACCTCTCCCTGGACCGATAACTGTGACAAGTTCTaGCGGGTGGCCGGCCTCACA | + |
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Preference number: 2 (lower is better) Translates to: GASCYSPGTGWVTSPWTDNCDKF*RVAGLT Trigger: TGTGAGGCCGGCCACCCGGCAGAACTTGTCACAGTT...ATCGGTCCAGGGAGAGGTCACCCAGCCGGTCCCGGGAGAGTAGCAGGAGGCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGCCTCCTGCTACTCTCCCGGGACCGGCTGGGTGACCTCTCCCTGGACCGATTCACGTTTCCGAGCCTaGGCCTCAAACTGTGACAAG | + |
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Preference number: 2 (lower is better) Translates to: GASCYSPGTGWVTSPWTDSRFRA*ASNCDK Trigger: CTTGTCACAGTTTGAGGCTCAGGCTCGGAAACGTGA...ATCGGTCCAGGGAGAGGTCACCCAGCCGGTCCCGGGAGAGTAGCAGGAGGCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
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| 3UTR-3UTR GCA 90 bp | GGATGGCCCCCGGGGGAGGTACAGCCAGATGAGGAGGTAATCGAGGAGGAGGGGATGGGCTGGACATGTTaGTCTCTTCCTGTCTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: GWPPGEVQPDEEVIEEEGMGWTC*SLPVCP Trigger: AGGGCAGACAGGAAGAGAGCAACATGTCCAGCCCAT...CCCCTCCTCCTCGATTACCTCCTCATCTGGCTGTACCTCCCCCGGGGGCCATCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
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| 3UTR-3UTR TCA 90 bp | CTAAGTCCCATCTCCACATGTCATGTCTCTTTTTACACCAGATCTCACAGGCCCCCGGGACCGGCTGGGTaGCCTCTCCCTGGACCGATG | + |
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Preference number: 2 (lower is better) Translates to: LSPISTCHVSFYTRSHRPPGPAG*PLPGPM Trigger: CATCGGTCCAGGGAGAGGTCACCCAGCCGGTCCCGG...GGGCCTGTGAGATCTGGTGTAAAAAGAGACATGACATGTGGAGATGGGACTTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
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| 3UTR-3UTR GCA 90 bp | AGATTCTCAGAGGGGGTTGCCCGTCCATCAGCAGAATCACTAGAGTCTCGGGAGAACTGTGACAAGTTCTaGCGGGTGGCCGGCCTCACA | + |
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Preference number: 2 (lower is better) Translates to: RFSEGVARPSAESLESRENCDKF*RVAGLT Trigger: TGTGAGGCCGGCCACCCGGCAGAACTTGTCACAGTT...CTCCCGAGACTCTAGTGATTCTGCTGATGGACGGGCAACCCCCTCTGAGAATCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000238102.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAGCTCCCACTGGCACCCACACTGTATGACTTGGCCTCTATGCCATGAAGACGGGGAAGGGGTGGAGTaGCCTCCGTCCTTTAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: KSSHWHPHCMTWPLCHEDGEGVE*PPSFSP Trigger: AGGACTAAAGGACGGAGGCCACTCCACCCCTTCCCC...GTCTTCATGGCATAGAGGCCAAGTCATACAGTGTGGGTGCCAGTGGGAGCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCGGCAACGCTCATCATTGGCGACTCGGGACTGTTTGATAACTGCAATGGCTGGCAAACAGGAGGTGTaGGACTGGGAGGGCTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: TRQRSSLATRDCLITAMAGKQEV*DWEGCQ Trigger: TTGGCAGCCCTCCCAGTCCCACACCTCCTGTTTGCC...AGCCATTGCAGTTATCAAACAGTCCCGAGTCGCCAATGATGAGCGTTGCCGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
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| 3UTR-3UTR CCA 90 bp | TTCGTTTCCGAGCCTGAGCCTCAAACTGTGACAAGTTCTGCCGGGTGGCCGGCCATAGAGCGGATAACCTaGATCAGCTGCTGGTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: FVSEPEPQTVTSSAGWPAIERIT*ISCWSV Trigger: CACAGACCAGCAGCTGATCCAGGTTATCCGCTCTAT...GGCCGGCCACCCGGCAGAACTTGTCACAGTTTGAGGCTCAGGCTCGGAAACGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236706.2 ENSMUST00000238102.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCCCTGCAGATGCATGCAGAAGGAACATCACCCTATGGTACTCCAGGACTGTCTAGAGTCTCGGGAGTaGGCCCGTGGAGGTATTCCC | + |
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Preference number: 2 (lower is better) Translates to: RPCRCMQKEHHPMVLQDCLESRE*ARGGIP Trigger: GGGAATACCTCCACGGGCCCACTCCCGAGACTCTAG...ACAGTCCTGGAGTACCATAGGGTGATGTTCCTTCTGCATGCATCTGCAGGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTTATCCACACGAGCAGATGAGGGTACAAGATTCTCAGAGGGGGTTGCCCGTCTAGAGTCTCGGGAGTaGGCCCGTGGAGGTATTCGT | + |
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Preference number: 2 (lower is better) Translates to: GLSTRADEGTRFSEGVARLESRE*ARGGIR Trigger: ACGAATACCTCCACGGGCCCACTCCCGAGACTCTAG...ACGGGCAACCCCCTCTGAGAATCTTGTACCCTCATCTGCTCGTGTGGATAAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000236706.2 ENSMUST00000238102.2 |
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| 3UTR-3UTR TCA 90 bp | CTCACAGGCCCTGCAGATGCATGCAGAAGGAACATCACCCTATGGTACTCCAGGGGCACCCACACTGTATaGCTTGGCCTCTATGCCATG | + |
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Preference number: 2 (lower is better) Translates to: LTGPADACRRNITLWYSRGTHTV*LGLYAM Trigger: CATGGCATAGAGGCCAAGTCATACAGTGTGGGTGCC...CCTGGAGTACCATAGGGTGATGTTCCTTCTGCATGCATCTGCAGGGCCTGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
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| 3UTR-3UTR GCA 90 bp | CCCATCAAATATAGTATTGAGGGCAGAACCCTGGGCATTTTTGGCACACCCAGTAGTCTCGGTGCCTCCTaGTACTCTCCCGGGACCGGC | + |
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Preference number: 2 (lower is better) Translates to: PIKYSIEGRTLGIFGTPSSLGAS*YSPGTG Trigger: GCCGGTCCCGGGAGAGTAGCAGGAGGCACCGAGACT...ACTGGGTGTGCCAAAAATGCCCAGGGTTCTGCCCTCAATACTATATTTGATGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTTATCCACACGAGCAGATGAGGGTACAAGATTCTCAGAGGGGGTTGCCCGTACAAGTTCTGCCGGGTaGCCGGCCTCACATCTACTT | + |
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Preference number: 2 (lower is better) Translates to: GLSTRADEGTRFSEGVARTSSAG*PASHLL Trigger: AAGTAGATGTGAGGCCGGCCACCCGGCAGAACTTGT...ACGGGCAACCCCCTCTGAGAATCTTGTACCCTCATCTGCTCGTGTGGATAAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000238102.2 |
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| 3UTR-3UTR CCA 90 bp | AAGATTCTCAGAGGGGGTTGCCCGTCCATCAGCAGAATCACTAGAGTCTCGGGACTAGAGTCTCGGGAGTaGGCCCGTGGAGGTATTCGT | + |
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Preference number: 2 (lower is better) Translates to: KILRGGCPSISRITRVSGLESRE*ARGGIR Trigger: ACGAATACCTCCACGGGCCCACTCCCGAGACTCTAG...TCCCGAGACTCTAGTGATTCTGCTGATGGACGGGCAACCCCCTCTGAGAATCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000236706.2 ENSMUST00000238102.2 |
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| 3UTR-3UTR GCA 90 bp | CTCACAGGCCCTGCAGATGCATGCAGAAGGAACATCACCCTATGGTACTCCAGGAGCCATCTTCAATCCTaGAGGGCAGAGGGTTTTGCC | + |
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Preference number: 2 (lower is better) Translates to: LTGPADACRRNITLWYSRSHLQS*RAEGFA Trigger: GGCAAAACCCTCTGCCCTGCAGGATTGAAGATGGCT...CCTGGAGTACCATAGGGTGATGTTCCTTCTGCATGCATCTGCAGGGCCTGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| 3UTR-3UTR GCA 90 bp | CCGTCCATCAGCAGAATCACTAGAGTCTCGGGAGTGGGCCCGTGGAGGTATTCGATAACCTGGATCAGCTaGTGGTCTGTGGTCCACATT | + |
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Preference number: 2 (lower is better) Translates to: PSISRITRVSGVGPWRYSITWIS*WSVVHI Trigger: AATGTGGACCACAGACCAGCAGCTGATCCAGGTTAT...CGAATACCTCCACGGGCCCACTCCCGAGACTCTAGTGATTCTGCTGATGGACGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236706.2 ENSMUST00000238102.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGGGGTGGAGTGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAATTGAGGGCAGAACCCTaGGCATTTTTGGCACACCCA | + |
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Preference number: 2 (lower is better) Translates to: EGVEWPPSFSPDQGEEMQLRAEP*AFLAHP Trigger: TGGGTGTGCCAAAAATGCCCAGGGTTCTGCCCTCAA...TTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCACTCCACCCCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGCTTATCCACACGAGCAGATGAGGGTACAAGATTCTCAGAGGGGGTTGCCCTCAGCTGCTGGTCTGTaGTCCACATTATCACAGGAC | + |
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Preference number: 2 (lower is better) Translates to: GAYPHEQMRVQDSQRGLPSAAGL*STLSQD Trigger: GTCCTGTGATAATGTGGACCACAGACCAGCAGCTGA...GGGCAACCCCCTCTGAGAATCTTGTACCCTCATCTGCTCGTGTGGATAAGCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000236706.2 ENSMUST00000238102.2 |
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| 3UTR CAA 90 bp | GAGATGAGGACCCGGCAACGCTCATCATTGGCGACTCGGGACTGTTaGATAACTGCAATGGCTGTGAGTAGTGTCTCAATGGCGTCACTG | + |
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Preference number: 2 (lower is better) Translates to: EMRTRQRSSLATRDC*ITAMAVSSVSMASL Trigger: CAGTGACGCCATTGAGACACTACTCACAGCCATTGCAGTTATCAAACAGTCCCGAGTCGCCAATGATGAGCGTTGCCGGGTCCTCATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
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| 3UTR-3UTR TCA 90 bp | AGGTCCCATGACATCCCTAAGTCCAAAAAGGCAGTACCTTCCTCTAAAACAAGGAAGGCTGGGTTGAGGTaGAGGGCTGGTGGGATGGCC | + |
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Preference number: 2 (lower is better) Translates to: RSHDIPKSKKAVPSSKTRKAGLR*RAGGMA Trigger: GGCCATCCCACCAGCCCTTCACCTCAACCCAGCCTT...CCTTGTTTTAGAGGAAGGTACTGCCTTTTTGGACTTAGGGATGTCATGGGACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
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| 3UTR-3UTR CCA 90 bp | AGGTTTCCTTGGACAAAGCACCATTCTCTGTGGAGTCTATGGGCTGGACATGTTGGCAAACAGGAGGTGTaGGACTGGGAGGGCTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: RFPWTKHHSLWSLWAGHVGKQEV*DWEGCQ Trigger: TTGGCAGCCCTCCCAGTCCCACACCTCCTGTTTGCC...AACATGTCCAGCCCATAGACTCCACAGAGAATGGTGCTTTGTCCAAGGAAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTTATCCACACGAGCAGATGAGGGTACAAGATTCTCAGAGGGGGTTGCCCGTATAGAGCGGATAACCTaGATCAGCTGCTGGTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: GLSTRADEGTRFSEGVARIERIT*ISCWSV Trigger: CACAGACCAGCAGCTGATCCAGGTTATCCGCTCTAT...ACGGGCAACCCCCTCTGAGAATCTTGTACCCTCATCTGCTCGTGTGGATAAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000238102.2 |
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| 3UTR-3UTR CCA 90 bp | TCCACACGAGCAGATGAGGGTACAAGATTCTCAGAGGGGGTTGCCCGTCCATCATCAGCTGCTGGTCTGTaGTCCACATTATCACAGGAC | + |
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Preference number: 2 (lower is better) Translates to: STRADEGTRFSEGVARPSSAAGL*STLSQD Trigger: GTCCTGTGATAATGTGGACCACAGACCAGCAGCTGA...TGATGGACGGGCAACCCCCTCTGAGAATCTTGTACCCTCATCTGCTCGTGTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000236706.2 ENSMUST00000238102.2 |
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| 3UTR-3UTR CCA 90 bp | TCCACACGAGCAGATGAGGGTACAAGATTCTCAGAGGGGGTTGCCCGTCCATCAACCTGGATCAGCTGCTaGTCTGTGGTCCACATTATC | + |
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Preference number: 2 (lower is better) Translates to: STRADEGTRFSEGVARPSTWISC*SVVHII Trigger: GATAATGTGGACCACAGACCAGCAGCTGATCCAGGT...TGATGGACGGGCAACCCCCTCTGAGAATCTTGTACCCTCATCTGCTCGTGTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000236706.2 ENSMUST00000238102.2 |
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| 3UTR-3UTR TCA 90 bp | CTCACAGGCCCTGCAGATGCATGCAGAAGGAACATCACCCTATGGTACTCCAGGATCCACACGAGCAGATaGGGGTACAAGATTCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: LTGPADACRRNITLWYSRIHTSR*GYKILR Trigger: TCTGAGAATCTTGTACCCTCATCTGCTCGTGTGGAT...CCTGGAGTACCATAGGGTGATGTTCCTTCTGCATGCATCTGCAGGGCCTGTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
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| 3UTR-3UTR TCA 90 bp | GAGCAGATGAGGGTACAAGATTCTCAGAGGGGGTTGCCCGTCCATCAGCAGAATATTCGTTTCCGAGCCTaGGCCTCAAACTGTGACAAG | + |
|
Preference number: 2 (lower is better) Translates to: EQMRVQDSQRGLPVHQQNIRFRA*ASNCDK Trigger: CTTGTCACAGTTTGAGGCTCAGGCTCGGAAACGAAT...ATTCTGCTGATGGACGGGCAACCCCCTCTGAGAATCTTGTACCCTCATCTGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000236706.2 ENSMUST00000238102.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGTCAGACAGCAAGGAGTCAAAAGGATTCAGCCTTCTAGGAGGCCAGGGAAATTGGGACTGGGAGGGCTaGCAAGCCATCTTCAATCCT | + |
|
Preference number: 2 (lower is better) Translates to: ESDSKESKGFSLLGGQGNWDWEG*QAIFNP Trigger: AGGATTGAAGATGGCTTGGCAGCCCTCCCAGTCCCA...ATTTCCCTGGCCTCCTAGAAGGCTGAATCCTTTTGACTCCTTGCTGTCTGACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGGAGGGCTGCCAAGCCATCTTCAATCCTGCAGGGCAGAGGGTTTTGCCTGGAAATTCCATTTGCTTGTaGAGAAAATGGCCACCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: WEGCQAIFNPAGQRVLPGNSICL*RKWPPV Trigger: CACTGGTGGCCATTTTCTGCACAAGCAAATGGAATT...TCCAGGCAAAACCCTCTGCCCTGCAGGATTGAAGATGGCTTGGCAGCCCTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR GCA 90 bp | GACTGGGAGGGCTGCCAAGCCATCTTCAATCCTGCAGGGCAGAGGGTTTTGCCTTGGTCCATTAATCAATaGTTTCTTCGGCACCAGTAC | + |
|
Preference number: 2 (lower is better) Translates to: DWEGCQAIFNPAGQRVLPWSINQ*FLRHQY Trigger: GTACTGGTGCCGAAGAAAGCATTGATTAATGGACCA...AGGCAAAACCCTCTGCCCTGCAGGATTGAAGATGGCTTGGCAGCCCTCCCAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGCCCTGCAGATGCATGCAGAAGGAACATCACCCTATGGTACTCCAGGACTGTGCAGAGGGTTTTGCCTaGAGGAAGTTAGGGATTTGG | + |
|
Preference number: 2 (lower is better) Translates to: RPCRCMQKEHHPMVLQDCAEGFA*RKLGIW Trigger: CCAAATCCCTAACTTCCTCCAGGCAAAACCCTCTGC...ACAGTCCTGGAGTACCATAGGGTGATGTTCCTTCTGCATGCATCTGCAGGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR CAA 90 bp | CTTGGACAAAGCACCATTCTCTGTGGAGTCTATGGGCTGGACATGTaGCTCTCTTCCTGTCTGCCCTCATTTCCTACCCCAGCAAGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: LGQSTILCGVYGLDM*LSSCLPSFPTPASL Trigger: AAGACTTGCTGGGGTAGGAAATGAGGGCAGACAGGAAGAGAGCAACATGTCCAGCCCATAGACTCCACAGAGAATGGTGCTTTGTCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR TCA 90 bp | CTAAGTCCCATCTCCACATGTCATGTCTCTTTTTACACCAGATCTCACAGGCCCAGGGGTCCTCGTTACTaGGGTCCCATGACATCCCTA | + |
|
Preference number: 2 (lower is better) Translates to: LSPISTCHVSFYTRSHRPRGPRY*GPMTSL Trigger: TAGGGATGTCATGGGACCTCAGTAACGAGGACCCCT...GGGCCTGTGAGATCTGGTGTAAAAAGAGACATGACATGTGGAGATGGGACTTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTGGGGAGAAGGATTCCATGTTAAATGGAAAGCCTCAGGGAAAGGAAATACCTAGAAGGTGGAGGGCCTaGATCTCGGCTGCCATGGTG | + |
|
Preference number: 2 (lower is better) Translates to: LGEKDSMLNGKPQGKEIPRRWRA*ISAAMV Trigger: CACCATGGCAGCCGAGATTCAGGCCCTCCACCTTCT...AGGTATTTCCTTTCCCTGAGGCTTTCCATTTAACATGGAATCCTTCTCCCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
||
| 3UTR-3UTR GCA 90 bp | GACAAAGCACCATTCTCTGTGGAGTCTATGGGCTGGACATGTTGCTCTCTTCCTCAGGGCAGAGGGTTTTaGCTGGAGGAAGTTAGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: DKAPFSVESMGWTCCSLPQGRGF*LEEVRD Trigger: ATCCCTAACTTCCTCCAGGCAAAACCCTCTGCCCTG...AGGAAGAGAGCAACATGTCCAGCCCATAGACTCCACAGAGAATGGTGCTTTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGAGTGGGCCCGTGGAGGTATTCGTTTCCGAGCCTGAGCCTCAAACTGTGACAATTTGCACGATTCTCTaGAAATTTCAACTCCACCAC | + |
|
Preference number: 2 (lower is better) Translates to: GSGPVEVFVSEPEPQTVTICTIL*KFQLHH Trigger: GTGGTGGAGTTGAAATTTGCAGAGAATCGTGCAAAT...TGTCACAGTTTGAGGCTCAGGCTCGGAAACGAATACCTCCACGGGCCCACTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236706.2 ENSMUST00000238102.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTGCACTAGCTCCAGACACTGCTTTGGAAATGGCACTGCTGGAAATTGCTCTGTCTCTGTGGAGTCTATaGGCTGGACATGTTGCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: PALAPDTALEMALLEIALSLWSL*AGHVAL Trigger: GAGAGCAACATGTCCAGCCCATAGACTCCACAGAGA...CAGAGCAATTTCCAGCAGTGCCATTTCCAAAGCAGTGTCTGGAGCTAGTGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTACAAGATTCTCAGAGGGGGTTGCCCGTCCATCAGCAGAATCACTAGAGTCTATAGAGCGGATAACCTaGATCAGCTGCTGGTCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: GTRFSEGVARPSAESLESIERIT*ISCWSV Trigger: CACAGACCAGCAGCTGATCCAGGTTATCCGCTCTAT...AGACTCTAGTGATTCTGCTGATGGACGGGCAACCCCCTCTGAGAATCTTGTACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000238102.2 |
||
| 3UTR CAA 90 bp | TCCTCACTACTGACTGCTCCTGGGCAATCAGAAACTCAGGTTTCCTaGGACAAAGCACCATTCTCTGTGGAGTCTATGGGCTGGACATGT | + |
|
Preference number: 2 (lower is better) Translates to: SSLLTAPGQSETQVS*DKAPFSVESMGWTC Trigger: ACATGTCCAGCCCATAGACTCCACAGAGAATGGTGCTTTGTCCAAGGAAACCTGAGTTTCTGATTGCCCAGGAGCAGTCAGTAGTGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR CAA 90 bp | GTCCCGTTCTCTATCCCGGTGTCTCTCATGTTCCCGGTTCCTCTCTaGGAAATAATCATCATGCCGGTCTTCGTTATGAAGCAAGTCTCG | + |
|
Preference number: 2 (lower is better) Translates to: VPFSIPVSLMFPVPL*EIIIMPVFVMKQVS Trigger: CGAGACTTGCTTCATAACGAAGACCGGCATGATGATTATTTCCAAGAGAGGAACCGGGAACATGAGAGACACCGGGATAGAGAACGGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGATCGGTTTAGGGAACAGGAAAATAAGCCACAACTTGCAGTCTCTGTCCAAGGAGGAACAAGTCCACTaGGGAGTCAGACAGCAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: GIGLGNRKISHNLQSLSKEEQVH*GVRQQG Trigger: TCCTTGCTGTCTGACTCCTCAGTGGACTTGTTCCTC...CTTGGACAGAGACTGCAAGTTGTGGCTTATTTTCCTGTTCCCTAAACCGATCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR TCA 90 bp | CTAAGTCCCATCTCCACATGTCATGTCTCTTTTTACACCAGATCTCACAGGCCCACAGGCAGGCAAGCCTaGAGCAGCAAATGGTGGTAT | + |
|
Preference number: 2 (lower is better) Translates to: LSPISTCHVSFYTRSHRPTGRQA*SSKWWY Trigger: ATACCACCATTTGCTGCTTCAGGCTTGCCTGCCTGT...GGGCCTGTGAGATCTGGTGTAAAAAGAGACATGACATGTGGAGATGGGACTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTGGCCCCATCAAATATAGTATTGAGGGCAGAACCCTGGGCATTTTTGGCACAAGTCTCCCCCGAGTCTaGAGAATCTCCAATGACCCT | + |
|
Preference number: 2 (lower is better) Translates to: LGPIKYSIEGRTLGIFGTSLPRV*RISNDP Trigger: AGGGTCATTGGAGATTCTTCAGACTCGGGGGAGACT...TGTGCCAAAAATGCCCAGGGTTCTGCCCTCAATACTATATTTGATGGGGCCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR GCA 90 bp | CCCATCAAATATAGTATTGAGGGCAGAACCCTGGGCATTTTTGGCACACCCAGTCAACCTCCCGGGTTCTaGTTTGGAGGAACAAGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: PIKYSIEGRTLGIFGTPSQPPGF*FGGTSP Trigger: TGGACTTGTTCCTCCAAAGCAGAACCCGGGAGGTTG...ACTGGGTGTGCCAAAAATGCCCAGGGTTCTGCCCTCAATACTATATTTGATGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGGAGGGCTGCCAAGCCATCTTCAATCCTGCAGGGCAGAGGGTTTTGCCTGGAACATACTGCTCAAATTaGTTTCTTCCCCACATTTCT | + |
|
Preference number: 2 (lower is better) Translates to: WEGCQAIFNPAGQRVLPGTYCSN*FLPHIS Trigger: AGAAATGTGGGGAAGAAAGCAATTTGAGCAGTATGT...TCCAGGCAAAACCCTCTGCCCTGCAGGATTGAAGATGGCTTGGCAGCCCTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTACAAGATTCTCAGAGGGGGTTGCCCGTCCATCAGCAGAATCACTAGAGTCTATAACCTGGATCAGCTaGTGGTCTGTGGTCCACATT | + |
|
Preference number: 2 (lower is better) Translates to: GTRFSEGVARPSAESLESITWIS*WSVVHI Trigger: AATGTGGACCACAGACCAGCAGCTGATCCAGGTTAT...AGACTCTAGTGATTCTGCTGATGGACGGGCAACCCCCTCTGAGAATCTTGTACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000236706.2 ENSMUST00000238102.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTTACAACTCTGAGCTGAGTTCACTAAAGTCTGGCTCCAATTCTTCTCTGCTCAAGAAGGGGAAGGGGTaGAGTGGCCTCCGTCCTTTA | + |
|
Preference number: 2 (lower is better) Translates to: PYNSELSSLKSGSNSSLLKKGKG*SGLRPL Trigger: TAAAGGACGGAGGCCACTCCACCCCTTCCCCTTCTT...GAGCAGAGAAGAATTGGAGCCAGACTTTAGTGAACTCAGCTCAGAGTTGTAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| 3UTR-3UTR CCA 90 bp | TATGGTACTCCAGGACTGTGGCTACCTCTATCAGGAGCAACCTATAACAATTGGACAAGTTCTGCCGGGTaGCCGGCCTCACATCTACTT | + |
|
Preference number: 2 (lower is better) Translates to: YGTPGLWLPLSGATYNNWTSSAG*PASHLL Trigger: AAGTAGATGTGAGGCCGGCCACCCGGCAGAACTTGT...CCAATTGTTATAGGTTGCTCCTGATAGAGGTAGCCACAGTCCTGGAGTACCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
||
| 3UTR CAA 90 bp | TATGTTAGCAGGGTTTGGACCCTCTTGGCCCCATCAAATATAGTATaGAGGGCAGAACCCTGGGCATTTTTGGCACACCCAGTCACTTTC | + |
|
Preference number: 2 (lower is better) Translates to: YVSRVWTLLAPSNIV*RAEPWAFLAHPVTF Trigger: GAAAGTGACTGGGTGTGCCAAAAATGCCCAGGGTTCTGCCCTCAATACTATATTTGATGGGGCCAAGAGGGTCCAAACCCTGCTAACATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTCACTTTCCTACAATCCCACATAGAGGATCCATTTTCTCTGGGAAGGAAGTTAGTAGGGCAACACGCTaGGGGGCTTATCCACACGAG | + |
|
Preference number: 2 (lower is better) Translates to: SHFPTIPHRGSIFSGKEVSRATR*GAYPHE Trigger: CTCGTGTGGATAAGCCCCCCAGCGTGTTGCCCTACT...AACTTCCTTCCCAGAGAAAATGGATCCTCTATGTGGGATTGTAGGAAAGTGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTCTTGGGGAGAAGGATTCCATGTTAAATGGAAAGCCTCAGGGAAAGGAAATATGGGACTGGGAGGGCTaGCAAGCCATCTTCAATCCT | + |
|
Preference number: 2 (lower is better) Translates to: LLGEKDSMLNGKPQGKEIWDWEG*QAIFNP Trigger: AGGATTGAAGATGGCTTGGCAGCCCTCCCAGTCCCA...TATTTCCTTTCCCTGAGGCTTTCCATTTAACATGGAATCCTTCTCCCCAAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| 3UTR-3UTR CCA 90 bp | TTTACCTGCCCATTAGTGCTGAGTTATCCCACATTTAAGTCAAAGTATGTACCTGGGGAAGGGGTGGAGTaGCCTCCGTCCTTTAGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: FTCPLVLSYPTFKSKYVPGEGVE*PPSFSP Trigger: AGGACTAAAGGACGGAGGCCACTCCACCCCTTCCCC...AGGTACATACTTTGACTTAAATGTGGGATAACTCAGCACTAATGGGCAGGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTTAGGGATTTGGAAGAAGGGGAAGGGGTGGAGTGGCCTCCGTCCTTTAGTCAGGATCCATTTTCTCTaGGAAGGAAGTTTTCTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: KLGIWKKGKGWSGLRPLVRIHFL*EGSFLS Trigger: ACTGAGAAAACTTCCTTCCCAGAGAAAATGGATCCT...GACTAAAGGACGGAGGCCACTCCACCCCTTCCCCTTCTTCCAAATCCCTAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTCACACACTAAGTCCCATCTCCACATGTCATGTCTCTTTTTACACCAGATCAACCCTGGGCATTTTTaGCACACCCAGTCACTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: ASHTKSHLHMSCLFLHQINPGHF*HTQSLS Trigger: GGAAAGTGACTGGGTGTGCCAAAAATGCCCAGGGTT...GATCTGGTGTAAAAAGAGACATGACATGTGGAGATGGGACTTAGTGTGTGAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTTACAACTCTGAGCTGAGTTCACTAAAGTCTGGCTCCAATTCTTCTCTGCTCTATGTTAGCAGGGTTTaGACCCTCTTGGCCCCATCA | + |
|
Preference number: 2 (lower is better) Translates to: PYNSELSSLKSGSNSSLLYVSRV*TLLAPS Trigger: TGATGGGGCCAAGAGGGTCCAAACCCTGCTAACATA...GAGCAGAGAAGAATTGGAGCCAGACTTTAGTGAACTCAGCTCAGAGTTGTAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCATCAAATATAGTATTGAGGGCAGAACCCTGGGCATTTTTGGCACACCCAGTCCACACTGTATGACTTaGCCTCTATGCCATGAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: PIKYSIEGRTLGIFGTPSPHCMT*PLCHED Trigger: GTCTTCATGGCATAGAGGCCAAGTCATACAGTGTGG...ACTGGGTGTGCCAAAAATGCCCAGGGTTCTGCCCTCAATACTATATTTGATGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
||
| 3UTR-3UTR TCA 90 bp | CCCTATGCCTCACACACTAAGTCCCATCTCCACATGTCATGTCTCTTTTTACACGAAAAAGAGCCCATGTaGGTAGGCTACATACTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: PYASHTKSHLHMSCLFLHEKEPM*VGYILL Trigger: GAGCAGTATGTAGCCTACTCACATGGGCTCTTTTTC...GTGTAAAAAGAGACATGACATGTGGAGATGGGACTTAGTGTGTGAGGCATAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR TCA 90 bp | CTAAGTCCCATCTCCACATGTCATGTCTCTTTTTACACCAGATCTCACAGGCCCTGGTCCTTACAACTCTaGGCTGAGTTCACTAAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: LSPISTCHVSFYTRSHRPWSLQL*AEFTKV Trigger: GACTTTAGTGAACTCAGCTCAGAGTTGTAAGGACCA...GGGCCTGTGAGATCTGGTGTAAAAAGAGACATGACATGTGGAGATGGGACTTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTACAATCCCACATAGAGGATCCATTTTCTCTGGGAAGGAAGTTTTCTCAGTAATGGGCTGGACATGTTaGTCTCTTCCTGTCTGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: PTIPHRGSIFSGKEVFSVMGWTC*SLPVCP Trigger: AGGGCAGACAGGAAGAGAGCAACATGTCCAGCCCAT...TACTGAGAAAACTTCCTTCCCAGAGAAAATGGATCCTCTATGTGGGATTGTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR GCA 90 bp | GCAGATGAGGGTACAAGATTCTCAGAGGGGGTTGCCCGTCCATCAGCAGAATCATTTAGACTGGCCATTTaGACGATTCTCTGCAAATTT | + |
|
Preference number: 2 (lower is better) Translates to: ADEGTRFSEGVARPSAESFRLAI*TILCKF Trigger: AAATTTGCAGAGAATCGTGCAAATGGCCAGTCTAAA...TGATTCTGCTGATGGACGGGCAACCCCCTCTGAGAATCTTGTACCCTCATCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000238102.2 |
||
| 3UTR-3UTR CCA 90 bp | GACATCCCTAAGTCCAAAAAGGCAGTACCTTCCTCTAAAACAAGGAAGAAGCCTTCTCTGTGGAGTCTATaGGCTGGACATGTTGCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: DIPKSKKAVPSSKTRKKPSLWSL*AGHVAL Trigger: GAGAGCAACATGTCCAGCCCATAGACTCCACAGAGA...AGGCTTCTTCCTTGTTTTAGAGGAAGGTACTGCCTTTTTGGACTTAGGGATGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTTGGAAATGGCACTGCTGGAAATTGCTCTGTTTCGCTTCATTATCTCTTCAAGAGGAACAAGTCCACTaGGGAGTCAGACAGCAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LWKWHCWKLLCFASLSLQEEQVH*GVRQQG Trigger: TCCTTGCTGTCTGACTCCTCAGTGGACTTGTTCCTC...TTGAAGAGATAATGAAGCGAAACAGAGCAATTTCCAGCAGTGCCATTTCCAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTACCTGCCCATTAGTGCTGAGTTATCCCACATTTAAGTCAAAGTATGTACCTGGAGGTACAGCCAGATaGGGAGGTAATCGAGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: FTCPLVLSYPTFKSKYVPGGTAR*GGNRGG Trigger: TCCTCCTCGATTACCTCCTCATCTGGCTGTACCTCC...AGGTACATACTTTGACTTAAATGTGGGATAACTCAGCACTAATGGGCAGGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
||
| 3UTR-3UTR CCA 90 bp | CCACATTTAAGTCAAAGTATGTACCTTGGGAATATGCAAGCCTATGCTTACATCAAGAAGGGGAAGGGGTaGAGTGGCCTCCGTCCTTTA | + |
|
Preference number: 2 (lower is better) Translates to: PHLSQSMYLGNMQAYAYIKKGKG*SGLRPL Trigger: TAAAGGACGGAGGCCACTCCACCCCTTCCCCTTCTT...GATGTAAGCATAGGCTTGCATATTCCCAAGGTACATACTTTGACTTAAATGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR CCA 90 bp | CTAAGTCCCATCTCCACATGTCATGTCTCTTTTTACACCAGATCTCACAGGCCCAAACTCAGGTTTCCTTaGACAAAGCACCATTCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: LSPISTCHVSFYTRSHRPKLRFP*TKHHSL Trigger: CAGAGAATGGTGCTTTGTCCAAGGAAACCTGAGTTT...GGGCCTGTGAGATCTGGTGTAAAAAGAGACATGACATGTGGAGATGGGACTTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTTTCTTCCCCACATTTCTGGTACTTTATAAATTAGGGGTCCTCGTTACTGAGTATGTTAGCAGGGTTTaGACCCTCTTGGCCCCATCA | + |
|
Preference number: 2 (lower is better) Translates to: AFFPTFLVLYKLGVLVTEYVSRV*TLLAPS Trigger: TGATGGGGCCAAGAGGGTCCAAACCCTGCTAACATA...CTCAGTAACGAGGACCCCTAATTTATAAAGTACCAGAAATGTGGGGAAGAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCTCACACACTAAGTCCCATCTCCACATGTCATGTCTCTTTTTACACCAGATCAGGAAGAAGCCTTCTTaGGGAGAAGGATTCCATGTT | + |
|
Preference number: 2 (lower is better) Translates to: ASHTKSHLHMSCLFLHQIRKKPS*GEGFHV Trigger: AACATGGAATCCTTCTCCCCAAGAAGGCTTCTTCCT...GATCTGGTGTAAAAAGAGACATGACATGTGGAGATGGGACTTAGTGTGTGAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGATCGGTTTAGGGAACAGGAAAATAAGCCACAACTTGCAGTCTCTGTCCAAGGAGTTCACTAAAGTCTaGCTCCAATTCTTCTCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: GIGLGNRKISHNLQSLSKEFTKV*LQFFSA Trigger: AGCAGAGAAGAATTGGAGCCAGACTTTAGTGAACTC...CTTGGACAGAGACTGCAAGTTGTGGCTTATTTTCCTGTTCCCTAAACCGATCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTCTTGGGGAGAAGGATTCCATGTTAAATGGAAAGCCTCAGGGAAAGGAAATACTTCATGTAAGTATCTaGTGGAGGCCCCACTGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: LLGEKDSMLNGKPQGKEILHVSI*WRPHCS Trigger: GCTACAGTGGGGCCTCCACCAGATACTTACATGAAG...TATTTCCTTTCCCTGAGGCTTTCCATTTAACATGGAATCCTTCTCCCCAAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTACCTGCCCATTAGTGCTGAGTTATCCCACATTTAAGTCAAAGTATGTACCTCAGGGCAGAGGGTTTTaGCTGGAGGAAGTTAGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: FTCPLVLSYPTFKSKYVPQGRGF*LEEVRD Trigger: ATCCCTAACTTCCTCCAGGCAAAACCCTCTGCCCTG...AGGTACATACTTTGACTTAAATGTGGGATAACTCAGCACTAATGGGCAGGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR GCA 90 bp | AATGAGGCAGGGTGCCATGTTGATGGAATAGGGATCGGTTTAGGGAACAGGAAAATTTGCACGATTCTCTaGAAATTTCAACTCCACCAC | + |
|
Preference number: 2 (lower is better) Translates to: NEAGCHVDGIGIGLGNRKICTIL*KFQLHH Trigger: GTGGTGGAGTTGAAATTTGCAGAGAATCGTGCAAAT...TTTCCTGTTCCCTAAACCGATCCCTATTCCATCAACATGGCACCCTGCCTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTGACAAGTTCTGCCGGGTGGCCGGCCTCACATCTACTTTTTCTCCATTAAGATTTAGACTGGCCATTTaGACGATTCTCTGCAAATTT | + |
|
Preference number: 2 (lower is better) Translates to: CDKFCRVAGLTSTFSPLRFRLAI*TILCKF Trigger: AAATTTGCAGAGAATCGTGCAAATGGCCAGTCTAAA...TCTTAATGGAGAAAAAGTAGATGTGAGGCCGGCCACCCGGCAGAACTTGTCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000238102.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCTATGCCTCACACACTAAGTCCCATCTCCACATGTCATGTCTCTTTTTACACAAACTCAGGTTTCCTTaGACAAAGCACCATTCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: PYASHTKSHLHMSCLFLHKLRFP*TKHHSL Trigger: CAGAGAATGGTGCTTTGTCCAAGGAAACCTGAGTTT...GTGTAAAAAGAGACATGACATGTGGAGATGGGACTTAGTGTGTGAGGCATAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR CAA 90 bp | GAAATAAACCGTCAATATGTGAGGAGAAAACTGAGAACACTTGTCTaGTCACAAGGTAATTTCTGTTCTCATGGTCCCTCCTCAACCGGC | + |
|
Preference number: 2 (lower is better) Translates to: EINRQYVRRKLRTLV*SQGNFCSHGPSSTG Trigger: GCCGGTTGAGGAGGGACCATGAGAACAGAAATTACCTTGTGACAAGACAAGTGTTCTCAGTTTTCTCCTCACATATTGACGGTTTATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR GCA 90 bp | GCCTCACACACTAAGTCCCATCTCCACATGTCATGTCTCTTTTTACACCAGATCTGTACCTTGGGAATATaGAAGCCTATGCTTACATCA | + |
|
Preference number: 2 (lower is better) Translates to: ASHTKSHLHMSCLFLHQICTLGI*KPMLTS Trigger: TGATGTAAGCATAGGCTTGCATATTCCCAAGGTACA...GATCTGGTGTAAAAAGAGACATGACATGTGGAGATGGGACTTAGTGTGTGAGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTCACTTTCCTACAATCCCACATAGAGGATCCATTTTCTCTGGGAAGGAAGTTAGGAAGAAGCCTTCTTaGGGAGAAGGATTCCATGTT | + |
|
Preference number: 2 (lower is better) Translates to: SHFPTIPHRGSIFSGKEVRKKPS*GEGFHV Trigger: AACATGGAATCCTTCTCCCCAAGAAGGCTTCTTCCT...AACTTCCTTCCCAGAGAAAATGGATCCTCTATGTGGGATTGTAGGAAAGTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTCTTGGGGAGAAGGATTCCATGTTAAATGGAAAGCCTCAGGGAAAGGAAATACTATTAGAAGTGTGCTaGGATGAGAGAGGCATCCAA | + |
|
Preference number: 2 (lower is better) Translates to: LLGEKDSMLNGKPQGKEILLEVC*DERGIQ Trigger: TTGGATGCCTCTCTCATCCCAGCACACTTCTAATAG...TATTTCCTTTCCCTGAGGCTTTCCATTTAACATGGAATCCTTCTCCCCAAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTGGGGAGAAGGATTCCATGTTAAATGGAAAGCCTCAGGGAAAGGAAATACCTTCAGCTGCTGGTCTGTaGTCCATTAATCAATGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: LGEKDSMLNGKPQGKEIPSAAGL*SINQCF Trigger: AAAGCATTGATTAATGGACCACAGACCAGCAGCTGA...AGGTATTTCCTTTCCCTGAGGCTTTCCATTTAACATGGAATCCTTCTCCCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTTGGAAATGGCACTGCTGGAAATTGCTCTGTTTCGCTTCATTATCTCTTCAACATGTAAGTATCTGGTaGAGGCCCCACTGTAGCATT | + |
|
Preference number: 2 (lower is better) Translates to: LWKWHCWKLLCFASLSLQHVSIW*RPHCSI Trigger: AATGCTACAGTGGGGCCTCCACCAGATACTTACATG...TTGAAGAGATAATGAAGCGAAACAGAGCAATTTCCAGCAGTGCCATTTCCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTTTCTTCCCCACATTTCTGGTACTTTATAAATTAGGGGTCCTCGTTACTGAGTGGAAATGGCACTGCTaGAAATTGCTCTGTTTCGCT | + |
|
Preference number: 2 (lower is better) Translates to: AFFPTFLVLYKLGVLVTEWKWHC*KLLCFA Trigger: AGCGAAACAGAGCAATTTCCAGCAGTGCCATTTCCA...CTCAGTAACGAGGACCCCTAATTTATAAAGTACCAGAAATGTGGGGAAGAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
||
| 3UTR-3UTR GCA 90 bp | GCTTTCTTCCCCACATTTCTGGTACTTTATAAATTAGGGGTCCTCGTTACTGAGCTTTGGAAATGGCACTaGTGGAAATTGCTCTGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: AFFPTFLVLYKLGVLVTELWKWH*WKLLCF Trigger: GAAACAGAGCAATTTCCAGCAGTGCCATTTCCAAAG...CTCAGTAACGAGGACCCCTAATTTATAAAGTACCAGAAATGTGGGGAAGAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
||
| 3UTR-3UTR GCA 90 bp | GACATCCCTAAGTCCAAAAAGGCAGTACCTTCCTCTAAAACAAGGAAGAAGCCTCCATTAAAAACAATTTaGTTCCACCCAGACTCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: DIPKSKKAVPSSKTRKKPPLKTI*FHPDSF Trigger: AAAGGAGTCTGGGTGGAAGCAAATTGTTTTTAATGG...AGGCTTCTTCCTTGTTTTAGAGGAAGGTACTGCCTTTTTGGACTTAGGGATGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR GCA 90 bp | CCACATTTAAGTCAAAGTATGTACCTTGGGAATATGCAAGCCTATGCTTACATCAATTCCATTTGCTTGTaGAGAAAATGGCCACCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: PHLSQSMYLGNMQAYAYINSICL*RKWPPV Trigger: CACTGGTGGCCATTTTCTGCACAAGCAAATGGAATT...GATGTAAGCATAGGCTTGCATATTCCCAAGGTACATACTTTGACTTAAATGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTACCTGCCCATTAGTGCTGAGTTATCCCACATTTAAGTCAAAGTATGTACCTAGGATCCATTTTCTCTaGGAAGGAAGTTTTCTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: FTCPLVLSYPTFKSKYVPRIHFL*EGSFLS Trigger: ACTGAGAAAACTTCCTTCCCAGAGAAAATGGATCCT...AGGTACATACTTTGACTTAAATGTGGGATAACTCAGCACTAATGGGCAGGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR GCA 90 bp | CCACATTTAAGTCAAAGTATGTACCTTGGGAATATGCAAGCCTATGCTTACATCCCATTAAAAACAATTTaGTTCCACCCAGACTCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: PHLSQSMYLGNMQAYAYIPLKTI*FHPDSF Trigger: AAAGGAGTCTGGGTGGAAGCAAATTGTTTTTAATGG...GATGTAAGCATAGGCTTGCATATTCCCAAGGTACATACTTTGACTTAAATGTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR TCA 72 bp | CGGGAGTGGGCCCGTGGAGGTATTCGTTTCCGAGCCTaGGCCTCAAACTGTGACAAGTTCTGCCGGGTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: REWARGGIRFRA*ASNCDKFCRVA Trigger: GGCCACCCGGCAGAACTTGTCACAGTTTGAGGCTCAGGCTCGGAAACGAATACCTCCACGGGCCCACTCCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236706.2 ENSMUST00000238102.2 |
||
| 3UTR TCA 72 bp | CCTCTTGGGACTCGGACGCACTCACGTTTCCGAGCCTaGGCCTCAAACTGTGACAAGTTCTGCCGGGTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: PLGTRTHSRFRA*ASNCDKFCRVA Trigger: GGCCACCCGGCAGAACTTGTCACAGTTTGAGGCTCAGGCTCGGAAACGTGAGTGCGTCCGAGTCCCAAGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
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| 3UTR TCA 72 bp | TCGGTGCCTCCTGCTACTCTCCCGGGACCGGCTGGGTaGCCTCTCCCTGGACCGATGTCTTTTCCTAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SVPPATLPGPAG*PLPGPMSFPRR Trigger: TCTTCTAGGAAAAGACATCGGTCCAGGGAGAGGTCACCCAGCCGGTCCCGGGAGAGTAGCAGGAGGCACCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
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| 3UTR-3UTR CAA 90 bp | CTCCTGCTACTCTCCCGGGACCGGCTGGGTGACCTCTCCCTGGACCGATGTCTTGCGACTCGGGACTGTTaGATAACTGCAATGGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LLLLSRDRLGDLSLDRCLATRDC*ITAMAV Trigger: CACAGCCATTGCAGTTATCAAACAGTCCCGAGTCGC...AAGACATCGGTCCAGGGAGAGGTCACCCAGCCGGTCCCGGGAGAGTAGCAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
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| 3UTR GCA 72 bp | GTGGGACTGGGAGGGCTGCCAAGCCATCTTCAATCCTaGAGGGCAGAGGGTTTTGCCTGGAGGAAGTTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: VGLGGLPSHLQS*RAEGFAWRKLG Trigger: CCCTAACTTCCTCCAGGCAAAACCCTCTGCCCTGCAGGATTGAAGATGGCTTGGCAGCCCTCCCAGTCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGGAGGGCTGCCAAGCCATCTTCAATCCTGCAGGGCAGAGGGTTTTGCCTGGACGGCAACGCTCATCATaGGCGACTCGGGACTGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: WEGCQAIFNPAGQRVLPGRQRSS*ATRDCL Trigger: CAAACAGTCCCGAGTCGCCAATGATGAGCGTTGCCG...TCCAGGCAAAACCCTCTGCCCTGCAGGATTGAAGATGGCTTGGCAGCCCTCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
||
| 3UTR CCA 72 bp | CAGGCAAGCCTGAAGCAGCAAATGGTGGTATCTGGCTaGCCTAGGCTTCTGGCAGATAGCAACCTCCCGGGT | + |
|
Preference number: 3 (lower is better) Translates to: QASLKQQMVVSG*PRLLADSNLPG Trigger: ACCCGGGAGGTTGCTATCTGCCAGAAGCCTAGGCCAGCCAGATACCACCATTTGCTGCTTCAGGCTTGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| 3UTR CCA 72 bp | AGCAGCAAATGGTGGTATCTGGCTGGCCTAGGCTTCTaGCAGATAGCAACCTCCCGGGTTCTGCTTTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSKWWYLAGLGF*QIATSRVLLWR Trigger: CCTCCAAAGCAGAACCCGGGAGGTTGCTATCTGCCAGAAGCCTAGGCCAGCCAGATACCACCATTTGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR CCA 72 bp | GGCTTCTGGCAGATAGCAACCTCCCGGGTTCTGCTTTaGAGGAACAAGTCCACTGAGGAGTCAGACAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: GFWQIATSRVLL*RNKSTEESDSK Trigger: CTTGCTGTCTGACTCCTCAGTGGACTTGTTCCTCCAAAGCAGAACCCGGGAGGTTGCTATCTGCCAGAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| 3UTR CCA 72 bp | GGCCCTGCAGATGCATGCAGAAGGAACATCACCCTATaGTACTCCAGGACTGTGGCTACCTCTATCAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: GPADACRRNITL*YSRTVATSIRS Trigger: GCTCCTGATAGAGGTAGCCACAGTCCTGGAGTACCATAGGGTGATGTTCCTTCTGCATGCATCTGCAGGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| 3UTR-3UTR CAA 90 bp | CGGCTGGGTGACCTCTCCCTGGACCGATGTCTTTTCCTAGAAGAGCTCCCACTGAGGGTTTGGACCCTCTaGGCCCCATCAAATATAGTA | + |
|
Preference number: 3 (lower is better) Translates to: RLGDLSLDRCLFLEELPLRVWTL*APSNIV Trigger: TACTATATTTGATGGGGCCAAGAGGGTCCAAACCCT...CAGTGGGAGCTCTTCTAGGAAAAGACATCGGTCCAGGGAGAGGTCACCCAGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
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| 3UTR TCA 72 bp | CTGGCACCCACACTGTATGACTTGGCCTCTATGCCATaGAGACAGTCCTTAAGAGAGGAGATGAGGACCCGG | + |
|
Preference number: 3 (lower is better) Translates to: LAPTLYDLASMP*RQSLREEMRTR Trigger: CCGGGTCCTCATCTCCTCTCTTAAGGACTGTCTTCATGGCATAGAGGCCAAGTCATACAGTGTGGGTGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
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| 3UTR CCA 72 bp | GAAGTTAGGGATTTGGAAGAAGGGGAAGGGGTGGAGTaGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: EVRDLEEGEGVE*PPSFSPDQGEE Trigger: CTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCACTCCACCCCTTCCCCTTCTTCCAAATCCCTAACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| 3UTR-3UTR CAA 90 bp | TGGGAGGGCTGCCAAGCCATCTTCAATCCTGCAGGGCAGAGGGTTTTGCCTGGAAGCAATTCCATTTGCTaGTGCAGAAAATGGCCACCA | + |
|
Preference number: 3 (lower is better) Translates to: WEGCQAIFNPAGQRVLPGSNSIC*CRKWPP Trigger: TGGTGGCCATTTTCTGCACAAGCAAATGGAATTGCT...TCCAGGCAAAACCCTCTGCCCTGCAGGATTGAAGATGGCTTGGCAGCCCTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| 3UTR-3UTR CAA 90 bp | CTCAGAGGGGGTTGCCCGTCCATCAGCAGAATCACTAGAGTCTCGGGAGTGGGCAAGAGTTCCAGCAGTTaGTGGACAGAATTTTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LRGGCPSISRITRVSGVGKSSSS*WTEFSE Trigger: CTCTGAAAATTCTGTCCACAAACTGCTGGAACTCTT...GCCCACTCCCGAGACTCTAGTGATTCTGCTGATGGACGGGCAACCCCCTCTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000238102.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTACTCCAGGACTGTGGCTACCTCTATCAGGAGCAACCTATAACAATTGGGATGAGGGACACCAAAGCTaGAGGAGAGAGGTGGTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: GTPGLWLPLSGATYNNWDEGHQS*RREVVG Trigger: CCCCACCACCTCTCTCCTCAAGCTTTGGTGTCCCTC...ATCCCAATTGTTATAGGTTGCTCCTGATAGAGGTAGCCACAGTCCTGGAGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
||
| 3UTR GCA 72 bp | GCCAAGCCATCTTCAATCCTGCAGGGCAGAGGGTTTTaGCTGGAGGAAGTTAGGGATTTGGAAGAAGGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: AKPSSILQGRGF*LEEVRDLEEGE Trigger: TTCCCCTTCTTCCAAATCCCTAACTTCCTCCAGGCAAAACCCTCTGCCCTGCAGGATTGAAGATGGCTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGTCAGACAGCAAGGAGTCAAAAGGATTCAGCCTTCTAGGAGGCCAGGGAAATTATGGGCTGGACATGTaGCTCTCTTCCTGTCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: ESDSKESKGFSLLGGQGNYGLDM*LSSCLP Trigger: GGGCAGACAGGAAGAGAGCAACATGTCCAGCCCATA...ATTTCCCTGGCCTCCTAGAAGGCTGAATCCTTTTGACTCCTTGCTGTCTGACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGTTAGGGATTTGGAAGAAGGGGAAGGGGTGGAGTGGCCTCCGTCCTTTAGTCAGGGTTTGGACCCTCTaGGCCCCATCAAATATAGTA | + |
|
Preference number: 3 (lower is better) Translates to: KLGIWKKGKGWSGLRPLVRVWTL*APSNIV Trigger: TACTATATTTGATGGGGCCAAGAGGGTCCAAACCCT...GACTAAAGGACGGAGGCCACTCCACCCCTTCCCCTTCTTCCAAATCCCTAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGGCTTATCCACACGAGCAGATGAGGGTACAAGATTCTCAGAGGGGGTTGCCCAAGAGTTCCAGCAGTTaGTGGACAGAATTTTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GAYPHEQMRVQDSQRGLPKSSSS*WTEFSE Trigger: CTCTGAAAATTCTGTCCACAAACTGCTGGAACTCTT...GGGCAACCCCCTCTGAGAATCTTGTACCCTCATCTGCTCGTGTGGATAAGCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000238102.2 |
||
| 3UTR TCA 72 bp | AACCTCCCGGGTTCTGCTTTGGAGGAACAAGTCCACTaGGGAGTCAGACAGCAAGGAGTCAAAAGGATTCAG | + |
|
Preference number: 3 (lower is better) Translates to: NLPGSALEEQVH*GVRQQGVKRIQ Trigger: CTGAATCCTTTTGACTCCTTGCTGTCTGACTCCTCAGTGGACTTGTTCCTCCAAAGCAGAACCCGGGAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR TCA 72 bp | CCAATTCAGTCTCCCCCGAGTCTGAAGAATCTCCAATaGCCCTATGCCTCACACACTAAGTCCCATCTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PIQSPPSLKNLQ*PYASHTKSHLH Trigger: GTGGAGATGGGACTTAGTGTGTGAGGCATAGGGTCATTGGAGATTCTTCAGACTCGGGGGAGACTGAATTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR CCA 72 bp | TTTCCTTGGACAAAGCACCATTCTCTGTGGAGTCTATaGGCTGGACATGTTGCTCTCTTCCTGTCTGCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: FPWTKHHSLWSL*AGHVALFLSAL Trigger: GAGGGCAGACAGGAAGAGAGCAACATGTCCAGCCCATAGACTCCACAGAGAATGGTGCTTTGTCCAAGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR CAA 90 bp | CAATCCCACATAGAGGATCCATTTTCTCTGGGAAGGAAGTTTTCTCAGTATCCTGAGGTATTCCCCCTCTaGGGACTCGGACGCACTCAC | + |
|
Preference number: 3 (lower is better) Translates to: QSHIEDPFSLGRKFSQYPEVFPL*GLGRTH Trigger: GTGAGTGCGTCCGAGTCCCAAGAGGGGGAATACCTC...AGGATACTGAGAAAACTTCCTTCCCAGAGAAAATGGATCCTCTATGTGGGATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGCGACTCGGGACTGTTTGATAACTGCAATGGCTGTGAGTAGTGTCTCAATGGCTCCAGACACTGCTTaGGAAATGGCACTGCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LATRDCLITAMAVSSVSMAPDTA*EMALLE Trigger: TTCCAGCAGTGCCATTTCCAAAGCAGTGTCTGGAGC...CATTGAGACACTACTCACAGCCATTGCAGTTATCAAACAGTCCCGAGTCGCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
||
| 3UTR TCA 72 bp | GATGAGAGAGGCATCCAATTCAGTCTCCCCCGAGTCTaGAGAATCTCCAATGACCCTATGCCTCACACACTA | + |
|
Preference number: 3 (lower is better) Translates to: DERGIQFSLPRV*RISNDPMPHTL Trigger: TAGTGTGTGAGGCATAGGGTCATTGGAGATTCTTCAGACTCGGGGGAGACTGAATTGGATGCCTCTCTCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR TCA 72 bp | TTTCCTAGAAGAGCTCCCACTGGCACCCACACTGTATaGCTTGGCCTCTATGCCATGAAGACAGTCCTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: FPRRAPTGTHTV*LGLYAMKTVLK Trigger: CTTAAGGACTGTCTTCATGGCATAGAGGCCAAGTCATACAGTGTGGGTGCCAGTGGGAGCTCTTCTAGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTTCTCAGTATCCTCACTACTGACTGCTCCTGGGCAATCAGAAACTCAGGTGAGGAAGTTAGGGATTaGGAAGAAGGGGAAGGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SFLSILTTDCSWAIRNSGEEVRD*EEGEGV Trigger: CACCCCTTCCCCTTCTTCCAAATCCCTAACTTCCTC...ACCTGAGTTTCTGATTGCCCAGGAGCAGTCAGTAGTGAGGATACTGAGAAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR CCA 72 bp | AATGGAAAGCCTCAGGGAAAGGAAATACCTAAGAGCTaGTTATCACAACAGGCAGGCAAGCCTGAAGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: NGKPQGKEIPKS*LSQQAGKPEAA Trigger: TGCTGCTTCAGGCTTGCCTGCCTGTTGTGATAACCAGCTCTTAGGTATTTCCTTTCCCTGAGGCTTTCCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTTGGGGAGAAGGATTCCATGTTAAATGGAAAGCCTCAGGGAAAGGAAATAGATTCTCAGAGGGGGTaGCCCGTCCATCAGCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LLGEKDSMLNGKPQGKEIDSQRG*PVHQQN Trigger: ATTCTGCTGATGGACGGGCAACCCCCTCTGAGAATC...TATTTCCTTTCCCTGAGGCTTTCCATTTAACATGGAATCCTTCTCCCCAAGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGTACCTTGGGAATATGCAAGCCTATGCTTACATCAAACCTGAAAAAGAGCCCGAGGAAGTTAGGGATTaGGAAGAAGGGGAAGGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: MYLGNMQAYAYIKPEKEPEEVRD*EEGEGV Trigger: CACCCCTTCCCCTTCTTCCAAATCCCTAACTTCCTC...GGGCTCTTTTTCAGGTTTGATGTAAGCATAGGCTTGCATATTCCCAAGGTACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR TCA 72 bp | AGAAAATGGCCACCAGTGTGCTGGTCCTTACAACTCTaGGCTGAGTTCACTAAAGTCTGGCTCCAATTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: RKWPPVCWSLQL*AEFTKVWLQFF Trigger: GAAGAATTGGAGCCAGACTTTAGTGAACTCAGCTCAGAGTTGTAAGGACCAGCACACTGGTGGCCATTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR GCA 72 bp | TGGGAAGGAAGTTTTCTCAGTATCCTCACTACTGACTaGTCCTGGGCAATCAGAAACTCAGGTTTCCTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: WEGSFLSILTTD*SWAIRNSGFLG Trigger: TCCAAGGAAACCTGAGTTTCTGATTGCCCAGGAGCAGTCAGTAGTGAGGATACTGAGAAAACTTCCTTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR CCA 72 bp | TTGGCCCCATCAAATATAGTATTGAGGGCAGAACCCTaGGCATTTTTGGCACACCCAGTCACTTTCCTACAA | + |
|
Preference number: 3 (lower is better) Translates to: LAPSNIVLRAEP*AFLAHPVTFLQ Trigger: TTGTAGGAAAGTGACTGGGTGTGCCAAAAATGCCCAGGGTTCTGCCCTCAATACTATATTTGATGGGGCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR TCA 72 bp | GCCTATGCTTACATCAAACCTGAAAAAGAGCCCATGTaGGTAGGCTACATACTGCTCAAATTGCTTTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: AYAYIKPEKEPM*VGYILLKLLSS Trigger: GGAAGAAAGCAATTTGAGCAGTATGTAGCCTACTCACATGGGCTCTTTTTCAGGTTTGATGTAAGCATAGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGGGAGAAGGATTCCATGTTAAATGGAAAGCCTCAGGGAAAGGAAATACCTCTGAGAACACTTGTCTaGTCACAAGGTAATTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LGEKDSMLNGKPQGKEIPLRTLV*SQGNFC Trigger: ACAGAAATTACCTTGTGACAAGACAAGTGTTCTCAG...AGGTATTTCCTTTCCCTGAGGCTTTCCATTTAACATGGAATCCTTCTCCCCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR CAA 90 bp | GACATCCCTAAGTCCAAAAAGGCAGTACCTTCCTCTAAAACAAGGAAGAAGCCTCTGAGAACACTTGTCTaGTCACAAGGTAATTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: DIPKSKKAVPSSKTRKKPLRTLV*SQGNFC Trigger: ACAGAAATTACCTTGTGACAAGACAAGTGTTCTCAG...AGGCTTCTTCCTTGTTTTAGAGGAAGGTACTGCCTTTTTGGACTTAGGGATGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTACCTGCCCATTAGTGCTGAGTTATCCCACATTTAAGTCAAAGTATGTACCTAAGAGTTCCAGCAGTTaGTGGACAGAATTTTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: FTCPLVLSYPTFKSKYVPKSSSS*WTEFSE Trigger: CTCTGAAAATTCTGTCCACAAACTGCTGGAACTCTT...AGGTACATACTTTGACTTAAATGTGGGATAACTCAGCACTAATGGGCAGGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
||
| CDS-3UTR TCA 90 bp | GAAGGGGTGGAGTGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAACCGGGACCGGCTGGGTaGCCTCTCCCTGGACCGATG | + |
|
Preference number: 4 (lower is better) Translates to: EGVEWPPSFSPDQGEEMQPGPAG*PLPGPM Trigger: CATCGGTCCAGGGAGAGGTCACCCAGCCGGTCCCGG...TTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCACTCCACCCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS-3UTR CCA 90 bp | CTCACAGGCCCTGCAGATGCATGCAGAAGGAACATCACCCTATGGTACTCCAGGTCTCCCGGGACCGGCTaGGTGACCTCTCCCTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: LTGPADACRRNITLWYSRSPGTG*VTSPWT Trigger: GGTCCAGGGAGAGGTCACCCAGCCGGTCCCGGGAGA...CCTGGAGTACCATAGGGTGATGTTCCTTCTGCATGCATCTGCAGGGCCTGTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS-3UTR CCA 90 bp | GGACGCACTCACGTTTCCGAGCCTGAGCCTCAAACTGTGACAAGTTCTGCCGGGGCGAACAGGAGGGGGTaGTTCCGTGCTACTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRTHVSEPEPQTVTSSAGANRRG*FRATAS Trigger: AGAAGCAGTAGCACGGAACCACCCCCTCCTGTTCGC...CCCGGCAGAACTTGTCACAGTTTGAGGCTCAGGCTCGGAAACGTGAGTGCGTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGCAGAGGGTTTTGCCTGGAGGAAGTTAGGGATTTGGAAGAAGGGGAAGGGTTGGGAGCTGGCTCCTaGCGAACAGGAGGGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QGRGFCLEEVRDLEEGEGLGAGS*RTGGGG Trigger: ACCACCCCCTCCTGTTCGCCAGGAGCCAGCTCCCAA...CCCTTCCCCTTCTTCCAAATCCCTAACTTCCTCCAGGCAAAACCCTCTGCCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| CDS-3UTR GCA 90 bp | GCCCGTCCATCAGCAGAATCACTAGAGTCTCGGGAGTGGGCCCGTGGAGGTATTGTGGTTCCGTGCTACTaGTTCTGTCATCTGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ARPSAESLESREWARGGIVVPCY*FCHLRA Trigger: AGCCCTCAGATGACAGAAGCAGTAGCACGGAACCAC...AATACCTCCACGGGCCCACTCCCGAGACTCTAGTGATTCTGCTGATGGACGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000238102.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGAGGGGGTTGCCCGTCCATCAGCAGAATCACTAGAGTCTCGGGAGTGGGCTCTTGTTGTTTGGTTTaGGAGCTGGCTCCTGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LRGGCPSISRITRVSGVGSCCLV*ELAPGE Trigger: TTCGCCAGGAGCCAGCTCCCAAACCAAACAACAAGA...GCCCACTCCCGAGACTCTAGTGATTCTGCTGATGGACGGGCAACCCCCTCTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000238102.2 |
||
| CDS-3UTR CCA 90 bp | AAGATTCTCAGAGGGGGTTGCCCGTCCATCAGCAGAATCACTAGAGTCTCGGGAGTTTGGTTTGGGAGCTaGCTCCTGGCGAACAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KILRGGCPSISRITRVSGVWFGS*LLANRR Trigger: CCTCCTGTTCGCCAGGAGCCAGCTCCCAAACCAAAC...TCCCGAGACTCTAGTGATTCTGCTGATGGACGGGCAACCCCCTCTGAGAATCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000238102.2 |
||
| CDS-3UTR TCA 90 bp | GACTGGGAGGGCTGCCAAGCCATCTTCAATCCTGCAGGGCAGAGGGTTTTGCCTATCCACACGAGCAGATaGGGGTACAAGATTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DWEGCQAIFNPAGQRVLPIHTSR*GYKILR Trigger: TCTGAGAATCTTGTACCCTCATCTGCTCGTGTGGAT...AGGCAAAACCCTCTGCCCTGCAGGATTGAAGATGGCTTGGCAGCCCTCCCAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS-3UTR CCA 90 bp | TCCACACGAGCAGATGAGGGTACAAGATTCTCAGAGGGGGTTGCCCGTCCATCAAGGGGTCTTGTTGTTTaGTTTGGGAGCTGGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: STRADEGTRFSEGVARPSRGLVV*FGSWLL Trigger: CAGGAGCCAGCTCCCAAACCAAACAACAAGACCCCT...TGATGGACGGGCAACCCCCTCTGAGAATCTTGTACCCTCATCTGCTCGTGTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000238102.2 |
||
| CDS-3UTR CCA 90 bp | ATGCCTCACACACTAAGTCCCATCTCCACATGTCATGTCTCTTTTTACACCAGAGTTGAGGTGAAGGGCTaGTGGGATGGCCCCCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: MPHTLSPISTCHVSFYTRVEVKG*WDGPRG Trigger: CCCCCGGGGGCCATCCCACCAGCCCTTCACCTCAAC...TCTGGTGTAAAAAGAGACATGACATGTGGAGATGGGACTTAGTGTGTGAGGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS-3UTR GCA 90 bp | AGGCCCTGCAGATGCATGCAGAAGGAACATCACCCTATGGTACTCCAGGACTGTGTGGTTCCGTGCTACTaGTTCTGTCATCTGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RPCRCMQKEHHPMVLQDCVVPCY*FCHLRA Trigger: AGCCCTCAGATGACAGAAGCAGTAGCACGGAACCAC...ACAGTCCTGGAGTACCATAGGGTGATGTTCCTTCTGCATGCATCTGCAGGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| CDS-3UTR GCA 90 bp | CTTGGGGAGAAGGATTCCATGTTAAATGGAAAGCCTCAGGGAAAGGAAATACCTAGTCTCGGTGCCTCCTaGTACTCTCCCGGGACCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGEKDSMLNGKPQGKEIPSLGAS*YSPGTG Trigger: GCCGGTCCCGGGAGAGTAGCAGGAGGCACCGAGACT...AGGTATTTCCTTTCCCTGAGGCTTTCCATTTAACATGGAATCCTTCTCCCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS-3UTR CCA 90 bp | TGTGACAAGTTCTGCCGGGTGGCCGGCCTCACATCTACTTTTTCTCCATTAAGAGCGAACAGGAGGGGGTaGTTCCGTGCTACTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CDKFCRVAGLTSTFSPLRANRRG*FRATAS Trigger: AGAAGCAGTAGCACGGAACCACCCCCTCCTGTTCGC...TCTTAATGGAGAAAAAGTAGATGTGAGGCCGGCCACCCGGCAGAACTTGTCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000238102.2 |
||
| CDS-3UTR CCA 90 bp | GACAAGTTCTGCCGGGTGGCCGGCCTCACATCTACTTTTTCTCCATTAAGAACTGCGAACAGGAGGGGGTaGTTCCGTGCTACTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DKFCRVAGLTSTFSPLRTANRRG*FRATAS Trigger: AGAAGCAGTAGCACGGAACCACCCCCTCCTGTTCGC...AGTTCTTAATGGAGAAAAAGTAGATGTGAGGCCGGCCACCCGGCAGAACTTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000238102.2 |
||
| CDS-3UTR CCA 90 bp | CTCACAGGCCCTGCAGATGCATGCAGAAGGAACATCACCCTATGGTACTCCAGGTCTTGTTGTTTGGTTTaGGAGCTGGCTCCTGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LTGPADACRRNITLWYSRSCCLV*ELAPGE Trigger: TTCGCCAGGAGCCAGCTCCCAAACCAAACAACAAGA...CCTGGAGTACCATAGGGTGATGTTCCTTCTGCATGCATCTGCAGGGCCTGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| CDS-3UTR CCA 90 bp | AGATTCTCAGAGGGGGTTGCCCGTCCATCAGCAGAATCACTAGAGTCTCGGGAGTCTTGTTGTTTGGTTTaGGAGCTGGCTCCTGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: RFSEGVARPSAESLESRESCCLV*ELAPGE Trigger: TTCGCCAGGAGCCAGCTCCCAAACCAAACAACAAGA...CTCCCGAGACTCTAGTGATTCTGCTGATGGACGGGCAACCCCCTCTGAGAATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000238102.2 |
||
| CDS-3UTR CCA 90 bp | GAGCAGATGAGGGTACAAGATTCTCAGAGGGGGTTGCCCGTCCATCAGCAGAATAGGGGTCTTGTTGTTTaGTTTGGGAGCTGGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EQMRVQDSQRGLPVHQQNRGLVV*FGSWLL Trigger: CAGGAGCCAGCTCCCAAACCAAACAACAAGACCCCT...ATTCTGCTGATGGACGGGCAACCCCCTCTGAGAATCTTGTACCCTCATCTGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000238102.2 |
||
| CDS-3UTR CCA 90 bp | CCCTATGCCTCACACACTAAGTCCCATCTCCACATGTCATGTCTCTTTTTACACTCGGGAGTGGGCCCGTaGAGGTATTCCCCCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PYASHTKSHLHMSCLFLHSGVGP*RYSPSW Trigger: CCAAGAGGGGGAATACCTCCACGGGCCCACTCCCGA...GTGTAAAAAGAGACATGACATGTGGAGATGGGACTTAGTGTGTGAGGCATAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS-3UTR CCA 90 bp | TGGGAGGGCTGCCAAGCCATCTTCAATCCTGCAGGGCAGAGGGTTTTGCCTGGATGGAAATGGCACTGCTaGAAATTGCTCTGTTTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: WEGCQAIFNPAGQRVLPGWKWHC*KLLCFA Trigger: AGCGAAACAGAGCAATTTCCAGCAGTGCCATTTCCA...TCCAGGCAAAACCCTCTGCCCTGCAGGATTGAAGATGGCTTGGCAGCCCTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS-3UTR TCA 90 bp | CTGCTCCTGGGCAATCAGAAACTCAGGTTTCCTTGGACAAAGCACCATTCTCTGGGAGGTACAGCCAGATaGGGAGGTAATCGAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLLGNQKLRFPWTKHHSLGGTAR*GGNRGG Trigger: TCCTCCTCGATTACCTCCTCATCTGGCTGTACCTCC...CAGAGAATGGTGCTTTGTCCAAGGAAACCTGAGTTTCTGATTGCCCAGGAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS-3UTR TCA 90 bp | GTGGACAGAATTTTCAGAGGCTACCACCACCTCAGCATATCCTTTAGACTGGCCATCTCGTCCCATAGATaGCCCTGCCAGGAGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VDRIFRGYHHLSISFRLAISSHR*PCQEKL Trigger: CAGCTTCTCCTGGCAGGGTCATCTATGGGACGAGAT...GGCCAGTCTAAAGGATATGCTGAGGTGGTGGTAGCCTCTGAAAATTCTGTCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236706.2 |
||
| CDS-3UTR GCA 90 bp | CCCATCAAATATAGTATTGAGGGCAGAACCCTGGGCATTTTTGGCACACCCAGTAACTGTGACAAGTTCTaGCGGGTGGCCGGCCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: PIKYSIEGRTLGIFGTPSNCDKF*RVAGLT Trigger: TGTGAGGCCGGCCACCCGGCAGAACTTGTCACAGTT...ACTGGGTGTGCCAAAAATGCCCAGGGTTCTGCCCTCAATACTATATTTGATGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS-3UTR CCA 90 bp | TTGGCGACTCGGGACTGTTTGATAACTGCAATGGCTGTGAGTAGTGTCTCAATGGTTTGGTTTGGGAGCTaGCTCCTGGCGAACAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LATRDCLITAMAVSSVSMVWFGS*LLANRR Trigger: CCTCCTGTTCGCCAGGAGCCAGCTCCCAAACCAAAC...CATTGAGACACTACTCACAGCCATTGCAGTTATCAAACAGTCCCGAGTCGCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
||
| CDS-3UTR CCA 90 bp | ATCAGCTGCTGGTCTGTGGTCCACATTATCACAGGACCATCTAATGACCACCAAGTTTGGTTTGGGAGCTaGCTCCTGGCGAACAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISCWSVVHIITGPSNDHQVWFGS*LLANRR Trigger: CCTCCTGTTCGCCAGGAGCCAGCTCCCAAACCAAAC...TTGGTGGTCATTAGATGGTCCTGTGATAATGTGGACCACAGACCAGCAGCTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236706.2 ENSMUST00000238102.2 |
||
| CDS-3UTR CCA 90 bp | GGGATCGGTTTAGGGAACAGGAAAATAAGCCACAACTTGCAGTCTCTGTCCAAGACCTGGATCAGCTGCTaGTCTGTGGTCCACCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GIGLGNRKISHNLQSLSKTWISC*SVVHQE Trigger: CTCCTGGTGGACCACAGACCAGCAGCTGATCCAGGT...CTTGGACAGAGACTGCAAGTTGTGGCTTATTTTCCTGTTCCCTAAACCGATCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS-3UTR TCA 90 bp | ATGTACCTTGGGAATATGCAAGCCTATGCTTACATCAAACCTGAAAAAGAGCCCAAGGCTGGGTTGAGGTaGAGGGCTGGTGGGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: MYLGNMQAYAYIKPEKEPKAGLR*RAGGMA Trigger: GGCCATCCCACCAGCCCTTCACCTCAACCCAGCCTT...GGGCTCTTTTTCAGGTTTGATGTAAGCATAGGCTTGCATATTCCCAAGGTACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS-3UTR TCA 90 bp | ATCAGCTGCTGGTCTGTGGTCCACATTATCACAGGACCATCTAATGACCACCAAATCTCGTCCCATAGATaGCCCCAGGAGAAGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISCWSVVHIITGPSNDHQISSHR*PQEKLP Trigger: AGGCAGCTTCTCCTGGGGTCATCTATGGGACGAGAT...TTGGTGGTCATTAGATGGTCCTGTGATAATGTGGACCACAGACCAGCAGCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238102.2 |
||
| CDS-3UTR GCA 90 bp | TGTGACAAGTTCTGCCGGGTGGCCGGCCTCACATCTACTTTTTCTCCATTAAGAGTGGTTCCGTGCTACTaGTTCTGTCATCTGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CDKFCRVAGLTSTFSPLRVVPCY*FCHLRA Trigger: AGCCCTCAGATGACAGAAGCAGTAGCACGGAACCAC...TCTTAATGGAGAAAAAGTAGATGTGAGGCCGGCCACCCGGCAGAACTTGTCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000238102.2 |
||
| CDS-3UTR GCA 90 bp | CTTGGCCCCATCAAATATAGTATTGAGGGCAGAACCCTGGGCATTTTTGGCACAGAGGGGGTGGTTCCGTaGTACTGCTTCTGTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGPIKYSIEGRTLGIFGTEGVVP*YCFCHL Trigger: CAGATGACAGAAGCAGTAGCACGGAACCACCCCCTC...TGTGCCAAAAATGCCCAGGGTTCTGCCCTCAATACTATATTTGATGGGGCCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| CDS-3UTR GCA 90 bp | TCTGGCTCCAATTCTTCTCTGCTCCTTGTTAAAGGCTTGAAGCACCTCCAGGCAATTCTCAGAGGGGGTTaGCCGTCCATCAGCAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: SGSNSSLLLVKGLKHLQAILRGG*PSISRI Trigger: GATTCTGCTGATGGACGGGCAACCCCCTCTGAGAAT...TGCCTGGAGGTGCTTCAAGCCTTTAACAAGGAGCAGAGAAGAATTGGAGCCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS-3UTR GCA 90 bp | GACAAGTTCTGCCGGGTGGCCGGCCTCACATCTACTTTTTCTCCATTAAGAACTCAACCCAGGAGAAGCTaGCTACATAGACAGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DKFCRVAGLTSTFSPLRTQPRRS*LHRQLL Trigger: GAGCAGCTGTCTATGTAGGCAGCTTCTCCTGGGTTG...AGTTCTTAATGGAGAAAAAGTAGATGTGAGGCCGGCCACCCGGCAGAACTTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
||
| CDS-3UTR CCA 90 bp | GCCTCACACACTAAGTCCCATCTCCACATGTCATGTCTCTTTTTACACCAGATCGCGAACAGGAGGGGGTaGTTCCGTGCTACTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASHTKSHLHMSCLFLHQIANRRG*FRATAS Trigger: AGAAGCAGTAGCACGGAACCACCCCCTCCTGTTCGC...GATCTGGTGTAAAAAGAGACATGACATGTGGAGATGGGACTTAGTGTGTGAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| CDS-3UTR CCA 90 bp | CCCTATGCCTCACACACTAAGTCCCATCTCCACATGTCATGTCTCTTTTTACACTCAGCTGCTGGTCTGTaGTCCACCAGGAGAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PYASHTKSHLHMSCLFLHSAAGL*STRRSC Trigger: GCAGCTTCTCCTGGTGGACCACAGACCAGCAGCTGA...GTGTAAAAAGAGACATGACATGTGGAGATGGGACTTAGTGTGTGAGGCATAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS-3UTR CCA 90 bp | CCACATTTAAGTCAAAGTATGTACCTTGGGAATATGCAAGCCTATGCTTACATCGAAGGGCTGGTGGGATaGCCCCCGGGGGAGGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: PHLSQSMYLGNMQAYAYIEGLVG*PPGEVQ Trigger: CTGTACCTCCCCCGGGGGCCATCCCACCAGCCCTTC...GATGTAAGCATAGGCTTGCATATTCCCAAGGTACATACTTTGACTTAAATGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS-3UTR CCA 90 bp | AAGTTAGGGATTTGGAAGAAGGGGAAGGGGTGGAGTGGCCTCCGTCCTTTAGTCCTCCAGACACTGCTTTaGAAATGGCACTGCTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KLGIWKKGKGWSGLRPLVLQTLL*KWHCWK Trigger: TTTCCAGCAGTGCCATTTCCAAAGCAGTGTCTGGAG...GACTAAAGGACGGAGGCCACTCCACCCCTTCCCCTTCTTCCAAATCCCTAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| 3UTR CAA 72 bp | AGGGTTTGGACCCTCTTGGCCCCATCAAATATAGTATaGAGGGCAGAACCCTGGGCATTTTTGGCACACCCA | + |
|
Preference number: 4 (lower is better) Translates to: RVWTLLAPSNIV*RAEPWAFLAHP Trigger: TGGGTGTGCCAAAAATGCCCAGGGTTCTGCCCTCAATACTATATTTGATGGGGCCAAGAGGGTCCAAACCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| CDS-3UTR TCA 90 bp | AGGTTTCCTTGGACAAAGCACCATTCTCTGTGGAGTCTATGGGCTGGACATGTTTCACGTTTCCGAGCCTaGGCCTCAAACTGTGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: RFPWTKHHSLWSLWAGHVSRFRA*ASNCDK Trigger: CTTGTCACAGTTTGAGGCTCAGGCTCGGAAACGTGA...AACATGTCCAGCCCATAGACTCCACAGAGAATGGTGCTTTGTCCAAGGAAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS-3UTR TCA 90 bp | AGTCACTTTCCTACAATCCCACATAGAGGATCCATTTTCTCTGGGAAGGAAGTTAGAAGGTGGAGGGCCTaGATCTCGGCTGCCATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SHFPTIPHRGSIFSGKEVRRWRA*ISAAMV Trigger: CACCATGGCAGCCGAGATTCAGGCCCTCCACCTTCT...AACTTCCTTCCCAGAGAAAATGGATCCTCTATGTGGGATTGTAGGAAAGTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS-3UTR TCA 90 bp | CCTTACAACTCTGAGCTGAGTTCACTAAAGTCTGGCTCCAATTCTTCTCTGCTCGGCACCCACACTGTATaGCTTGGCCTCTATGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: PYNSELSSLKSGSNSSLLGTHTV*LGLYAM Trigger: CATGGCATAGAGGCCAAGTCATACAGTGTGGGTGCC...GAGCAGAGAAGAATTGGAGCCAGACTTTAGTGAACTCAGCTCAGAGTTGTAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS-3UTR CCA 90 bp | AATGAGGCAGGGTGCCATGTTGATGGAATAGGGATCGGTTTAGGGAACAGGAAAAGGGGTCTTGTTGTTTaGTTTGGGAGCTGGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NEAGCHVDGIGIGLGNRKRGLVV*FGSWLL Trigger: CAGGAGCCAGCTCCCAAACCAAACAACAAGACCCCT...TTTCCTGTTCCCTAAACCGATCCCTATTCCATCAACATGGCACCCTGCCTCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| CDS-3UTR CCA 90 bp | GGGATCGGTTTAGGGAACAGGAAAATAAGCCACAACTTGCAGTCTCTGTCCAAGAGGGGTCTTGTTGTTTaGTTTGGGAGCTGGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GIGLGNRKISHNLQSLSKRGLVV*FGSWLL Trigger: CAGGAGCCAGCTCCCAAACCAAACAACAAGACCCCT...CTTGGACAGAGACTGCAAGTTGTGGCTTATTTTCCTGTTCCCTAAACCGATCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCAGACAGCAAGGAGTCAAAAGGATTCAGCCTTCTAGGAGGCCAGGGAAATATAGAGCGGATAACCTaGATCAGCTGCTGGTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ESDSKESKGFSLLGGQGNIERIT*ISCWSV Trigger: CACAGACCAGCAGCTGATCCAGGTTATCCGCTCTAT...ATTTCCCTGGCCTCCTAGAAGGCTGAATCCTTTTGACTCCTTGCTGTCTGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS-3UTR CCA 90 bp | AGTTTTCTCAGTATCCTCACTACTGACTGCTCCTGGGCAATCAGAAACTCAGGTACAAGTTCTGCCGGGTaGCCGGCCTCACATCTACTT | + |
|
Preference number: 4 (lower is better) Translates to: SFLSILTTDCSWAIRNSGTSSAG*PASHLL Trigger: AAGTAGATGTGAGGCCGGCCACCCGGCAGAACTTGT...ACCTGAGTTTCTGATTGCCCAGGAGCAGTCAGTAGTGAGGATACTGAGAAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| 3UTR CAA 72 bp | GGGATCGGTTTAGGGAACAGGAAAATAAGCCACAACTaGCAGTCTCTGTCCAAGGGGAATGTGCCTGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GIGLGNRKISHN*QSLSKGNVPVQ Trigger: TTGGACAGGCACATTCCCCTTGGACAGAGACTGCAAGTTGTGGCTTATTTTCCTGTTCCCTAAACCGATCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| CDS-3UTR TCA 90 bp | TGTGACAAGTTCTGCCGGGTGGCCGGCCTCACATCTACTTTTTCTCCATTAAGATTGAACTCCGAGTCCTaGTTGAACTCTTCATCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: CDKFCRVAGLTSTFSPLRLNSES*LNSSSA Trigger: CGCTGATGAAGAGTTCAATCAGGACTCGGAGTTCAA...TCTTAATGGAGAAAAAGTAGATGTGAGGCCGGCCACCCGGCAGAACTTGTCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
||
| CDS-3UTR GCA 90 bp | TATGGTACTCCAGGACTGTGGCTACCTCTATCAGGAGCAACCTATAACAATTGGATAACCTGGATCAGCTaGTGGTCTGTGGTCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: YGTPGLWLPLSGATYNNWITWIS*WSVVHQ Trigger: CTGGTGGACCACAGACCAGCAGCTGATCCAGGTTAT...CCAATTGTTATAGGTTGCTCCTGATAGAGGTAGCCACAGTCCTGGAGTACCATA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS-3UTR GCA 90 bp | CTCACAGGCCCTGCAGATGCATGCAGAAGGAACATCACCCTATGGTACTCCAGGATTTGCACGATTCTCTaGAAATTTCAACTCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LTGPADACRRNITLWYSRICTIL*KFQLHH Trigger: GTGGTGGAGTTGAAATTTGCAGAGAATCGTGCAAAT...CCTGGAGTACCATAGGGTGATGTTCCTTCTGCATGCATCTGCAGGGCCTGTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS-3UTR CCA 90 bp | CCTACAATCCCACATAGAGGATCCATTTTCTCTGGGAAGGAAGTTTTCTCAGTAGTTTGGTTTGGGAGCTaGCTCCTGGCGAACAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTIPHRGSIFSGKEVFSVVWFGS*LLANRR Trigger: CCTCCTGTTCGCCAGGAGCCAGCTCCCAAACCAAAC...TACTGAGAAAACTTCCTTCCCAGAGAAAATGGATCCTCTATGTGGGATTGTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| CDS-3UTR GCA 90 bp | GAGCAGATGAGGGTACAAGATTCTCAGAGGGGGTTGCCCGTCCATCAGCAGAATGTATGTATACAGAATTaGAGGGGTCTTGTTGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EQMRVQDSQRGLPVHQQNVCIQN*RGLVVW Trigger: CCAAACAACAAGACCCCTGCAATTCTGTATACATAC...ATTCTGCTGATGGACGGGCAACCCCCTCTGAGAATCTTGTACCCTCATCTGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000238102.2 |
||
| CDS-3UTR CCA 90 bp | CCCTATGCCTCACACACTAAGTCCCATCTCCACATGTCATGTCTCTTTTTACACCTTCATGTAAGTATCTaGTGGAGGCCCCACTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PYASHTKSHLHMSCLFLHLHVSI*WRPHCS Trigger: GCTACAGTGGGGCCTCCACCAGATACTTACATGAAG...GTGTAAAAAGAGACATGACATGTGGAGATGGGACTTAGTGTGTGAGGCATAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS-3UTR GCA 90 bp | ATGTACCTTGGGAATATGCAAGCCTATGCTTACATCAAACCTGAAAAAGAGCCCGTGGTTCCGTGCTACTaGTTCTGTCATCTGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MYLGNMQAYAYIKPEKEPVVPCY*FCHLRA Trigger: AGCCCTCAGATGACAGAAGCAGTAGCACGGAACCAC...GGGCTCTTTTTCAGGTTTGATGTAAGCATAGGCTTGCATATTCCCAAGGTACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| CDS-3UTR GCA 90 bp | GCCTCACACACTAAGTCCCATCTCCACATGTCATGTCTCTTTTTACACCAGATCACTAGCTCCAGACACTaGTTTGGAAATGGCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASHTKSHLHMSCLFLHQITSSRH*FGNGTA Trigger: AGCAGTGCCATTTCCAAAGCAGTGTCTGGAGCTAGT...GATCTGGTGTAAAAAGAGACATGACATGTGGAGATGGGACTTAGTGTGTGAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS-3UTR CCA 90 bp | GACATCCCTAAGTCCAAAAAGGCAGTACCTTCCTCTAAAACAAGGAAGAAGCCTTCTTGTTGTTTGGTTTaGGAGCTGGCTCCTGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: DIPKSKKAVPSSKTRKKPSCCLV*ELAPGE Trigger: TTCGCCAGGAGCCAGCTCCCAAACCAAACAACAAGA...AGGCTTCTTCCTTGTTTTAGAGGAAGGTACTGCCTTTTTGGACTTAGGGATGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| CDS-3UTR CCA 90 bp | TTTACCTGCCCATTAGTGCTGAGTTATCCCACATTTAAGTCAAAGTATGTACCTAGTAGGGCAACACGCTaGGGGGCTTATCCACACGAG | + |
|
Preference number: 4 (lower is better) Translates to: FTCPLVLSYPTFKSKYVPSRATR*GAYPHE Trigger: CTCGTGTGGATAAGCCCCCCAGCGTGTTGCCCTACT...AGGTACATACTTTGACTTAAATGTGGGATAACTCAGCACTAATGGGCAGGTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS-3UTR CCA 90 bp | AGTCACTTTCCTACAATCCCACATAGAGGATCCATTTTCTCTGGGAAGGAAGTTCACTGTAGCATTTGGTaGGGGGAAGAAGGCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SHFPTIPHRGSIFSGKEVHCSIW*GEEGWV Trigger: AACCCAGCCTTCTTCCCCCCACCAAATGCTACAGTG...AACTTCCTTCCCAGAGAAAATGGATCCTCTATGTGGGATTGTAGGAAAGTGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS-3UTR CCA 90 bp | TCTTGTCACAAGGTAATTTCTGTTCTCATGGTCCCTCCTCAACCGGCTAGGAAACCACACTGTATGACTTaGCCTCTATGCCATGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SCHKVISVLMVPPQPARKPHCMT*PLCHED Trigger: GTCTTCATGGCATAGAGGCCAAGTCATACAGTGTGG...TTTCCTAGCCGGTTGAGGAGGGACCATGAGAACAGAAATTACCTTGTGACAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
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| 3UTR CAA 72 bp | TCTATCCCGGTGTCTCTCATGTTCCCGGTTCCTCTCTaGGAAATAATCATCATGCCGGTCTTCGTTATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SIPVSLMFPVPL*EIIIMPVFVMK Trigger: CTTCATAACGAAGACCGGCATGATGATTATTTCCAAGAGAGGAACCGGGAACATGAGAGACACCGGGATAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCTCACACACTAAGTCCCATCTCCACATGTCATGTCTCTTTTTACACCAGATTGGCCTCTATGCCATaGAGACAGTCCTTAAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: MPHTLSPISTCHVSFYTRLASMP*RQSLRE Trigger: CTCTCTTAAGGACTGTCTTCATGGCATAGAGGCCAA...TCTGGTGTAAAAAGAGACATGACATGTGGAGATGGGACTTAGTGTGTGAGGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS-3UTR GCA 90 bp | CTGCTCCTGGGCAATCAGAAACTCAGGTTTCCTTGGACAAAGCACCATTCTCTGGTATGTATACAGAATTaGAGGGGTCTTGTTGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLGNQKLRFPWTKHHSLVCIQN*RGLVVW Trigger: CCAAACAACAAGACCCCTGCAATTCTGTATACATAC...CAGAGAATGGTGCTTTGTCCAAGGAAACCTGAGTTTCTGATTGCCCAGGAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| CDS-3UTR CCA 90 bp | ATGTACCTTGGGAATATGCAAGCCTATGCTTACATCAAACCTGAAAAAGAGCCCCATGTAAGTATCTGGTaGAGGCCCCACTGTAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: MYLGNMQAYAYIKPEKEPHVSIW*RPHCSI Trigger: AATGCTACAGTGGGGCCTCCACCAGATACTTACATG...GGGCTCTTTTTCAGGTTTGATGTAAGCATAGGCTTGCATATTCCCAAGGTACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS-3UTR TCA 90 bp | CCACATTTAAGTCAAAGTATGTACCTTGGGAATATGCAAGCCTATGCTTACATCTTGAACTCCGAGTCCTaGTTGAACTCTTCATCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PHLSQSMYLGNMQAYAYILNSES*LNSSSA Trigger: CGCTGATGAAGAGTTCAATCAGGACTCGGAGTTCAA...GATGTAAGCATAGGCTTGCATATTCCCAAGGTACATACTTTGACTTAAATGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| CDS-3UTR TCA 90 bp | CCCTATGCCTCACACACTAAGTCCCATCTCCACATGTCATGTCTCTTTTTACACTCATATAGGTCAATCTaGTCTGTATTGTTGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: PYASHTKSHLHMSCLFLHSYRSI*SVLLNS Trigger: GGAGTTCAACAATACAGATCAGATTGACCTATATGA...GTGTAAAAAGAGACATGACATGTGGAGATGGGACTTAGTGTGTGAGGCATAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| CDS-3UTR TCA 90 bp | GGTCCTTACAACTCTGAGCTGAGTTCACTAAAGTCTGGCTCCAATTCTTCTCTGTCATATAGGTCAATCTaGTCTGTATTGTTGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPYNSELSSLKSGSNSSLSYRSI*SVLLNS Trigger: GGAGTTCAACAATACAGATCAGATTGACCTATATGA...CAGAGAAGAATTGGAGCCAGACTTTAGTGAACTCAGCTCAGAGTTGTAAGGACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| CDS-3UTR GCA 90 bp | ACAGAATTTTCAGAGGCTACCACCACCTCAGCATATCCTTTAGACTGGCCATTTGTATGTATACAGAATTaGAGGGGTCTTGTTGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TEFSEATTTSAYPLDWPFVCIQN*RGLVVW Trigger: CCAAACAACAAGACCCCTGCAATTCTGTATACATAC...AAATGGCCAGTCTAAAGGATATGCTGAGGTGGTGGTAGCCTCTGAAAATTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000238102.2 |
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| CDS-3UTR GCA 90 bp | CTGATCAAGGTGAGGAGATGCAAGTCCATTAAAAACAATTTGCTTCCACCCAGAGGCACTGCTGGAAATTaGTCTGTTTCGCTTCATTAT | + |
|
Preference number: 4 (lower is better) Translates to: LIKVRRCKSIKNNLLPPRGTAGN*SVSLHY Trigger: ATAATGAAGCGAAACAGAGCAATTTCCAGCAGTGCC...TCTGGGTGGAAGCAAATTGTTTTTAATGGACTTGCATCTCCTCACCTTGATCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
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| CDS-3UTR GCA 90 bp | CCTACAATCCCACATAGAGGATCCATTTTCTCTGGGAAGGAAGTTTTCTCAGTACTTTGGAAATGGCACTaGTGGAAATTGCTCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PTIPHRGSIFSGKEVFSVLWKWH*WKLLCF Trigger: GAAACAGAGCAATTTCCAGCAGTGCCATTTCCAAAG...TACTGAGAAAACTTCCTTCCCAGAGAAAATGGATCCTCTATGTGGGATTGTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
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| CDS-3UTR GCA 90 bp | CTTCTTGGGGAGAAGGATTCCATGTTAAATGGAAAGCCTCAGGGAAAGGAAATATTTAGACTGGCCATTTaGACGATTCTCTGCAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: LLGEKDSMLNGKPQGKEIFRLAI*TILCKF Trigger: AAATTTGCAGAGAATCGTGCAAATGGCCAGTCTAAA...TATTTCCTTTCCCTGAGGCTTTCCATTTAACATGGAATCCTTCTCCCCAAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS-3UTR GCA 90 bp | TTAAGAACTTTTCCTGGTAAGAGTTCCAGCAGTTTGTGGACAGAATTTTCAGAGGTATGTATACAGAATTaGAGGGGTCTTGTTGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRTFPGKSSSSLWTEFSEVCIQN*RGLVVW Trigger: CCAAACAACAAGACCCCTGCAATTCTGTATACATAC...CTCTGAAAATTCTGTCCACAAACTGCTGGAACTCTTACCAGGAAAAGTTCTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000238102.2 |
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| CDS-3UTR CAA 90 bp | GGTGCCTCCTGCTACTCTCCCGGGACCGGCTGGGTGACCTCTCCCTGGACCGATAGAATTGCAGGGGTCTaGTTGTTTGGTTTGGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GASCYSPGTGWVTSPWTDRIAGV*LFGLGA Trigger: AGCTCCCAAACCAAACAACAAGACCCCTGCAATTCT...ATCGGTCCAGGGAGAGGTCACCCAGCCGGTCCCGGGAGAGTAGCAGGAGGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
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| CDS GCA 90 bp | GACAGCTGCTCGCCGACTCCGCAGGCCACTGTATGTATACAGAATTaGAGGGGTCTTGTTGTTTGGTTTGGGAGCTGGCTCCTGGCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: DSCSPTPQATVCIQN*RGLVVWFGSWLLAN Trigger: GTTCGCCAGGAGCCAGCTCCCAAACCAAACAACAAGACCCCTGCAATTCTGTATACATACAGTGGCCTGCGGAGTCGGCGAGCAGCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000038379.5 ENSMUST00000235674.2 ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000237321.2 ENSMUST00000238102.2 |
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| CDS GCA 90 bp | CTGCTGGTCTGTGGTCCACCAGGAGAAGCTGCCTACATAGACAGCTaGTCGCCGACTCCGCAGGCCACTGTATGTATACAGAATTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLVCGPPGEAAYIDS*SPTPQATVCIQNCR Trigger: CCTGCAATTCTGTATACATACAGTGGCCTGCGGAGTCGGCGAGCAGCTGTCTATGTAGGCAGCTTCTCCTGGTGGACCACAGACCAGCAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038379.5 ENSMUST00000235674.2 ENSMUST00000237321.2 |
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| CDS CCA 90 bp | TACAGAATTGCAGGGGTCTTGTTGTTTGGTTTGGGAGCTGGCTCCTaGCGAACAGGAGGGGGTGGTTCCGTGCTACTGCTTCTGTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: YRIAGVLLFGLGAGS*RTGGGGSVLLLLSS Trigger: AGATGACAGAAGCAGTAGCACGGAACCACCCCCTCCTGTTCGCCAGGAGCCAGCTCCCAAACCAAACAACAAGACCCCTGCAATTCTGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000038379.5 ENSMUST00000235674.2 ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000237321.2 ENSMUST00000238102.2 |
||
| CDS-3UTR CAA 90 bp | TGGGAGGGCTGCCAAGCCATCTTCAATCCTGCAGGGCAGAGGGTTTTGCCTGGATTCCCGGTTCCTCTCTaGGAAATAATCATCATGCCG | + |
|
Preference number: 5 (lower is better) Translates to: WEGCQAIFNPAGQRVLPGFPVPL*EIIIMP Trigger: CGGCATGATGATTATTTCCAAGAGAGGAACCGGGAA...TCCAGGCAAAACCCTCTGCCCTGCAGGATTGAAGATGGCTTGGCAGCCCTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS CCA 90 bp | GTATGTATACAGAATTGCAGGGGTCTTGTTGTTTGGTTTGGGAGCTaGCTCCTGGCGAACAGGAGGGGGTGGTTCCGTGCTACTGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VCIQNCRGLVVWFGS*LLANRRGWFRATAS Trigger: AGAAGCAGTAGCACGGAACCACCCCCTCCTGTTCGCCAGGAGCCAGCTCCCAAACCAAACAACAAGACCCCTGCAATTCTGTATACATAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000038379.5 ENSMUST00000235674.2 ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000237321.2 ENSMUST00000238102.2 |
||
| CDS-3UTR CAA 90 bp | AATGAGGCAGGGTGCCATGTTGATGGAATAGGGATCGGTTTAGGGAACAGGAAAGAGGTATTCCCCCTCTaGGGACTCGGACGCACTCAC | + |
|
Preference number: 5 (lower is better) Translates to: NEAGCHVDGIGIGLGNRKEVFPL*GLGRTH Trigger: GTGAGTGCGTCCGAGTCCCAAGAGGGGGAATACCTC...TTTCCTGTTCCCTAAACCGATCCCTATTCCATCAACATGGCACCCTGCCTCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS-3UTR CAA 90 bp | AATGAGGCAGGGTGCCATGTTGATGGAATAGGGATCGGTTTAGGGAACAGGAAAGAGGGACACCAAAGCTaGAGGAGAGAGGTGGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: NEAGCHVDGIGIGLGNRKEGHQS*RREVVG Trigger: CCCCACCACCTCTCTCCTCAAGCTTTGGTGTCCCTC...TTTCCTGTTCCCTAAACCGATCCCTATTCCATCAACATGGCACCCTGCCTCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS GCA 90 bp | TTCAGAGATCAATCCAACCCAGGAGAAGCTGCCTACATAGACAGCTaGTCGCCGACTCCGCAGGCCACTGTATGTATACAGAATTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FRDQSNPGEAAYIDS*SPTPQATVCIQNCR Trigger: CCTGCAATTCTGTATACATACAGTGGCCTGCGGAGTCGGCGAGCAGCTGTCTATGTAGGCAGCTTCTCCTGGGTTGGATTGATCTCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
||
| CDS-3UTR CAA 90 bp | CTAAGTCCCATCTCCACATGTCATGTCTCTTTTTACACCAGATCTCACAGGCCCCGGCAACGCTCATCATaGGCGACTCGGGACTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSPISTCHVSFYTRSHRPRQRSS*ATRDCL Trigger: CAAACAGTCCCGAGTCGCCAATGATGAGCGTTGCCG...GGGCCTGTGAGATCTGGTGTAAAAAGAGACATGACATGTGGAGATGGGACTTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS-3UTR CAA 90 bp | CAAGTTCTGCCGGGTGGCCGGCCTCACATCTACTTTTTCTCCATTAAGAACTTTGTCTTGTTGTTTGGTTaGGGAGCTGGCTCCTGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: QVLPGGRPHIYFFSIKNFVLLFG*GAGSWR Trigger: TCGCCAGGAGCCAGCTCCCAAACCAAACAACAAGAC...AAAGTTCTTAATGGAGAAAAAGTAGATGTGAGGCCGGCCACCCGGCAGAACTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000238102.2 |
||
| CDS-3UTR CAA 90 bp | GAGCAGATGAGGGTACAAGATTCTCAGAGGGGGTTGCCCGTCCATCAGCAGAATAGAATTGCAGGGGTCTaGTTGTTTGGTTTGGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: EQMRVQDSQRGLPVHQQNRIAGV*LFGLGA Trigger: AGCTCCCAAACCAAACAACAAGACCCCTGCAATTCT...ATTCTGCTGATGGACGGGCAACCCCCTCTGAGAATCTTGTACCCTCATCTGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000238102.2 |
||
| CDS-3UTR CAA 90 bp | TATGGTACTCCAGGACTGTGGCTACCTCTATCAGGAGCAACCTATAACAATTGGGTCTTGTTGTTTGGTTaGGGAGCTGGCTCCTGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: YGTPGLWLPLSGATYNNWVLLFG*GAGSWR Trigger: TCGCCAGGAGCCAGCTCCCAAACCAAACAACAAGAC...CCAATTGTTATAGGTTGCTCCTGATAGAGGTAGCCACAGTCCTGGAGTACCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
||
| CDS-3UTR CAA 90 bp | TCTTGTCACAAGGTAATTTCTGTTCTCATGGTCCCTCCTCAACCGGCTAGGAAAGATTCTCAGAGGGGGTaGCCCGTCCATCAGCAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SCHKVISVLMVPPQPARKDSQRG*PVHQQN Trigger: ATTCTGCTGATGGACGGGCAACCCCCTCTGAGAATC...TTTCCTAGCCGGTTGAGGAGGGACCATGAGAACAGAAATTACCTTGTGACAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
||
| CDS-3UTR CAA 90 bp | CTAAGTCCCATCTCCACATGTCATGTCTCTTTTTACACCAGATCTCACAGGCCCGCTCCAGACACTGCTTaGGAAATGGCACTGCTGGAA | + |
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Preference number: 5 (lower is better) Translates to: LSPISTCHVSFYTRSHRPAPDTA*EMALLE Trigger: TTCCAGCAGTGCCATTTCCAAAGCAGTGTCTGGAGC...GGGCCTGTGAGATCTGGTGTAAAAAGAGACATGACATGTGGAGATGGGACTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
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| CDS-3UTR CAA 90 bp | TATGGTACTCCAGGACTGTGGCTACCTCTATCAGGAGCAACCTATAACAATTGGGCGACTCGGGACTGTTaGATAACTGCAATGGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: YGTPGLWLPLSGATYNNWATRDC*ITAMAV Trigger: CACAGCCATTGCAGTTATCAAACAGTCCCGAGTCGC...CCAATTGTTATAGGTTGCTCCTGATAGAGGTAGCCACAGTCCTGGAGTACCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
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| CDS-3UTR CAA 90 bp | GCTTTCTTCCCCACATTTCTGGTACTTTATAAATTAGGGGTCCTCGTTACTGAGGTCTTGTTGTTTGGTTaGGGAGCTGGCTCCTGGCGA | + |
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Preference number: 5 (lower is better) Translates to: AFFPTFLVLYKLGVLVTEVLLFG*GAGSWR Trigger: TCGCCAGGAGCCAGCTCCCAAACCAAACAACAAGAC...CTCAGTAACGAGGACCCCTAATTTATAAAGTACCAGAAATGTGGGGAAGAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| CDS-3UTR CAA 90 bp | CTTCTTGGGGAGAAGGATTCCATGTTAAATGGAAAGCCTCAGGGAAAGGAAATACAGGGGTCTTGTTGTTaGGTTTGGGAGCTGGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: LLGEKDSMLNGKPQGKEIQGSCC*VWELAP Trigger: AGGAGCCAGCTCCCAAACCAAACAACAAGACCCCTG...TATTTCCTTTCCCTGAGGCTTTCCATTTAACATGGAATCCTTCTCCCCAAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| CDS-3UTR CAA 90 bp | ATCAGCTGCTGGTCTGTGGTCCACATTATCACAGGACCATCTAATGACCACCAAAGAATTGCAGGGGTCTaGTTGTTTGGTTTGGGAGCT | + |
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Preference number: 5 (lower is better) Translates to: ISCWSVVHIITGPSNDHQRIAGV*LFGLGA Trigger: AGCTCCCAAACCAAACAACAAGACCCCTGCAATTCT...TTGGTGGTCATTAGATGGTCCTGTGATAATGTGGACCACAGACCAGCAGCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236706.2 ENSMUST00000238102.2 |
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| CDS-3UTR CAA 90 bp | TTAAGAACTTTTCCTGGTAAGAGTTCCAGCAGTTTGTGGACAGAATTTTCAGAGGTCTTGTTGTTTGGTTaGGGAGCTGGCTCCTGGCGA | + |
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Preference number: 5 (lower is better) Translates to: LRTFPGKSSSSLWTEFSEVLLFG*GAGSWR Trigger: TCGCCAGGAGCCAGCTCCCAAACCAAACAACAAGAC...CTCTGAAAATTCTGTCCACAAACTGCTGGAACTCTTACCAGGAAAAGTTCTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000238102.2 |
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| CDS-3UTR CAA 90 bp | GACATCCCTAAGTCCAAAAAGGCAGTACCTTCCTCTAAAACAAGGAAGAAGCCTAGAATTGCAGGGGTCTaGTTGTTTGGTTTGGGAGCT | + |
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Preference number: 5 (lower is better) Translates to: DIPKSKKAVPSSKTRKKPRIAGV*LFGLGA Trigger: AGCTCCCAAACCAAACAACAAGACCCCTGCAATTCT...AGGCTTCTTCCTTGTTTTAGAGGAAGGTACTGCCTTTTTGGACTTAGGGATGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038379.5 ENSMUST00000236206.2 |
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| CDS-3UTR CAA 90 bp | GCTTTCTTCCCCACATTTCTGGTACTTTATAAATTAGGGGTCCTCGTTACTGAGTGGCACTGCTGGAAATaGCTCTGTTTCGCTTCATTA | + |
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Preference number: 5 (lower is better) Translates to: AFFPTFLVLYKLGVLVTEWHCWK*LCFASL Trigger: TAATGAAGCGAAACAGAGCAATTTCCAGCAGTGCCA...CTCAGTAACGAGGACCCCTAATTTATAAAGTACCAGAAATGTGGGGAAGAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
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| CDS-3UTR CAA 90 bp | CTTCTTGGGGAGAAGGATTCCATGTTAAATGGAAAGCCTCAGGGAAAGGAAATAAAGAGTTCCAGCAGTTaGTGGACAGAATTTTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: LLGEKDSMLNGKPQGKEIKSSSS*WTEFSE Trigger: CTCTGAAAATTCTGTCCACAAACTGCTGGAACTCTT...TATTTCCTTTCCCTGAGGCTTTCCATTTAACATGGAATCCTTCTCCCCAAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038379.5 |
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| CDS GCA 72 bp | GCTCCTGGCGAACAGGAGGGGGTGGTTCCGTGCTACTaGTTCTGTCATCTGAGGGCTGTGAGGCAGCCGTCA | + |
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Preference number: 6 (lower is better) Translates to: APGEQEGVVPCY*FCHLRAVRQPS Trigger: TGACGGCTGCCTCACAGCCCTCAGATGACAGAAGCAGTAGCACGGAACCACCCCCTCCTGTTCGCCAGGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000038379.5 ENSMUST00000235674.2 ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000237321.2 ENSMUST00000238102.2 |
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| CDS CCA 72 bp | GCAGGGGTCTTGTTGTTTGGTTTGGGAGCTGGCTCCTaGCGAACAGGAGGGGGTGGTTCCGTGCTACTGCTT | + |
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Preference number: 6 (lower is better) Translates to: AGVLLFGLGAGS*RTGGGGSVLLL Trigger: AAGCAGTAGCACGGAACCACCCCCTCCTGTTCGCCAGGAGCCAGCTCCCAAACCAAACAACAAGACCCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000038379.5 ENSMUST00000235674.2 ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000237321.2 ENSMUST00000238102.2 |
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| CDS CAA 90 bp | CGCCGACTCCGCAGGCCACTGTATGTATACAGAATTGCAGGGGTCTaGTTGTTTGGTTTGGGAGCTGGCTCCTGGCGAACAGGAGGGGGT | + |
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Preference number: 6 (lower is better) Translates to: RRLRRPLYVYRIAGV*LFGLGAGSWRTGGG Trigger: ACCCCCTCCTGTTCGCCAGGAGCCAGCTCCCAAACCAAACAACAAGACCCCTGCAATTCTGTATACATACAGTGGCCTGCGGAGTCGGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000038379.5 ENSMUST00000235674.2 ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000237321.2 ENSMUST00000238102.2 |
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| CDS GCA 72 bp | ATATCTCGTCCCATAGATGACCCTGCCAGGAGAAGCTaGCTACATAGACAGCTGCTCGCCGACTCCGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: ISRPIDDPARRS*LHRQLLADSAG Trigger: GCCTGCGGAGTCGGCGAGCAGCTGTCTATGTAGGCAGCTTCTCCTGGCAGGGTCATCTATGGGACGAGATAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236706.2 |
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| CDS GCA 72 bp | CTGATATCTCGTCCCATAGATGACCCCAGGAGAAGCTaGCTACATAGACAGCTGCTCGCCGACTCCGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: LISRPIDDPRRS*LHRQLLADSAG Trigger: GCCTGCGGAGTCGGCGAGCAGCTGTCTATGTAGGCAGCTTCTCCTGGGGTCATCTATGGGACGAGATATCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238102.2 |
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| CDS CCA 72 bp | CAGAATTGCAGGGGTCTTGTTGTTTGGTTTGGGAGCTaGCTCCTGGCGAACAGGAGGGGGTGGTTCCGTGCT | + |
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Preference number: 6 (lower is better) Translates to: QNCRGLVVWFGS*LLANRRGWFRA Trigger: AGCACGGAACCACCCCCTCCTGTTCGCCAGGAGCCAGCTCCCAAACCAAACAACAAGACCCCTGCAATTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000038379.5 ENSMUST00000235674.2 ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000237321.2 ENSMUST00000238102.2 |
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| CDS GCA 72 bp | TGTGGTCCACCAGGAGAAGCTGCCTACATAGACAGCTaGTCGCCGACTCCGCAGGCCACTGTATGTATACAG | + |
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Preference number: 6 (lower is better) Translates to: CGPPGEAAYIDS*SPTPQATVCIQ Trigger: CTGTATACATACAGTGGCCTGCGGAGTCGGCGAGCAGCTGTCTATGTAGGCAGCTTCTCCTGGTGGACCACA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038379.5 ENSMUST00000235674.2 ENSMUST00000237321.2 |
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| CDS CAA 90 bp | AGACAGCTGCTCGCCGACTCCGCAGGCCACTGTATGTATACAGAATaGCAGGGGTCTTGTTGTTTGGTTTGGGAGCTGGCTCCTGGCGAA | + |
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Preference number: 6 (lower is better) Translates to: RQLLADSAGHCMYTE*QGSCCLVWELAPGE Trigger: TTCGCCAGGAGCCAGCTCCCAAACCAAACAACAAGACCCCTGCAATTCTGTATACATACAGTGGCCTGCGGAGTCGGCGAGCAGCTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000038379.5 ENSMUST00000235674.2 ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000237321.2 ENSMUST00000238102.2 |
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| CDS GCA 72 bp | CAATCCAACCCAGGAGAAGCTGCCTACATAGACAGCTaGTCGCCGACTCCGCAGGCCACTGTATGTATACAG | + |
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Preference number: 6 (lower is better) Translates to: QSNPGEAAYIDS*SPTPQATVCIQ Trigger: CTGTATACATACAGTGGCCTGCGGAGTCGGCGAGCAGCTGTCTATGTAGGCAGCTTCTCCTGGGTTGGATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
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| CDS GCA 72 bp | GTTCTCTTTCAGAGATCAATCCAACCCAGGAGAAGCTaGCTACATAGACAGCTGCTCGCCGACTCCGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: VLFQRSIQPRRS*LHRQLLADSAG Trigger: GCCTGCGGAGTCGGCGAGCAGCTGTCTATGTAGGCAGCTTCTCCTGGGTTGGATTGATCTCTGAAAGAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236206.2 |
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| CDS GCA 72 bp | TCGCCGACTCCGCAGGCCACTGTATGTATACAGAATTaGAGGGGTCTTGTTGTTTGGTTTGGGAGCTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: SPTPQATVCIQN*RGLVVWFGSWL Trigger: GAGCCAGCTCCCAAACCAAACAACAAGACCCCTGCAATTCTGTATACATACAGTGGCCTGCGGAGTCGGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000038379.5 ENSMUST00000235674.2 ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000237321.2 ENSMUST00000238102.2 |
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| CDS CAA 72 bp | CGCAGGCCACTGTATGTATACAGAATTGCAGGGGTCTaGTTGTTTGGTTTGGGAGCTGGCTCCTGGCGAACA | + |
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Preference number: 6 (lower is better) Translates to: RRPLYVYRIAGV*LFGLGAGSWRT Trigger: TGTTCGCCAGGAGCCAGCTCCCAAACCAAACAACAAGACCCCTGCAATTCTGTATACATACAGTGGCCTGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000038379.5 ENSMUST00000235674.2 ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000237321.2 ENSMUST00000238102.2 |
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| CDS CAA 72 bp | AGGCCACTGTATGTATACAGAATTGCAGGGGTCTTGTaGTTTGGTTTGGGAGCTGGCTCCTGGCGAACAGGA | + |
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Preference number: 6 (lower is better) Translates to: RPLYVYRIAGVL*FGLGAGSWRTG Trigger: TCCTGTTCGCCAGGAGCCAGCTCCCAAACCAAACAACAAGACCCCTGCAATTCTGTATACATACAGTGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000038379.5 ENSMUST00000235674.2 ENSMUST00000236206.2 ENSMUST00000236706.2 ENSMUST00000237321.2 ENSMUST00000238102.2 |
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