Pregenerated sensors for CPSF6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055531Ensembl transcript IDs: ENSMUST00000069168.13, ENSMUST00000176480.8, ENSMUST00000176670.8, ENSMUST00000176686.8, ENSMUST00000177145.8
Found 256 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTGGAATCTCACTACTAGCTGCAAGGAATGTGACTACACAGCACTaGGCGACGCTGGGACTCAAGACAAGCTCAAGCTGTCACTGCCTC | + |
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Preference number: 1 (lower is better) Translates to: CGISLLAARNVTTQH*ATLGLKTSSSCHCL Trigger: GAGGCAGTGACAGCTTGAGCTTGTCTTGAGTCCCAGCGTCGCTCAGTGCTGTGTAGTCACATTCCTTGCAGCTAGTAGTGAGATTCCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
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| 3UTR TCA 90 bp | TATAGACACTGCAACAACCACTTGGGTAGCAAAACTGAAGTGACATaGGCACTCCAGTGGAAGAGTCTTGCAGTGGCATCTTGTTGTATG | + |
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Preference number: 1 (lower is better) Translates to: YRHCNNHLGSKTEVT*ALQWKSLAVASCCM Trigger: CATACAACAAGATGCCACTGCAAGACTCTTCCACTGGAGTGCTCATGTCACTTCAGTTTTGCTACCCAAGTGGTTGTTGCAGTGTCTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
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| 3UTR CCA 90 bp | AGCAGTATATTGAATTCAAAGTGCCACGTCAGGAGAAATACCTTGTaGAATCTCACTACTAGCTGCAAGGAATGTGACTACACAGCACTG | + |
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Preference number: 1 (lower is better) Translates to: SSILNSKCHVRRNTL*NLTTSCKECDYTAL Trigger: CAGTGCTGTGTAGTCACATTCCTTGCAGCTAGTAGTGAGATTCCACAAGGTATTTCTCCTGACGTGGCACTTTGAATTCAATATACTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
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| 3UTR TCA 90 bp | TTGCTGAACACAAGCCTTTCCCTGAGGTGTAAACATCAAATAACGTaGACAGCTTTACACATCAGCCCCATAAACAGTTTATTACAACAC | + |
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Preference number: 1 (lower is better) Translates to: LLNTSLSLRCKHQIT*TALHISPINSLLQH Trigger: GTGTTGTAATAAACTGTTTATGGGGCTGATGTGTAAAGCTGTTCACGTTATTTGATGTTTACACCTCAGGGAAAGGCTTGTGTTCAGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
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| 3UTR CCA 90 bp | TTTGTAAGGCTGTGCAGGGCTGTAAACTACTTTGCTAATATACCATaGGATGCAAAGGAAGGAGTAATAGACCTTTTCTTAAGGCTAAAG | + |
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Preference number: 1 (lower is better) Translates to: FVRLCRAVNYFANIP*DAKEGVIDLFLRLK Trigger: CTTTAGCCTTAAGAAAAGGTCTATTACTCCTTCCTTTGCATCCCATGGTATATTAGCAAAGTAGTTTACAGCCCTGCACAGCCTTACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
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| 3UTR CCA 90 bp | TATGGAAGTCTAGTTTTCATGGACATCAACAGAATGCCTACTGAATaGAATCTCACCTTACCTTTTGCACAGAAATCTTATGAAGTCACC | + |
|
Preference number: 1 (lower is better) Translates to: YGSLVFMDINRMPTE*NLTLPFAQKSYEVT Trigger: GGTGACTTCATAAGATTTCTGTGCAAAAGGTAAGGTGAGATTCCATTCAGTAGGCATTCTGTTGATGTCCATGAAAACTAGACTTCCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
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| 3UTR CCA 90 bp | AAGATAAATACCATGCTTGTTACTAGCGCAGTTTTAGGCCAACAATaGCCATATAGAAAACTGCTGAACAGTCACCTAAATGCTAAAGAA | + |
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Preference number: 1 (lower is better) Translates to: KINTMLVTSAVLGQQ*PYRKLLNSHLNAKE Trigger: TTCTTTAGCATTTAGGTGACTGTTCAGCAGTTTTCTATATGGCCATTGTTGGCCTAAAACTGCGCTAGTAACAAGCATGGTATTTATCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
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| 3UTR CCA 90 bp | CAAAGAAAATTATTTCCACGTATTTCTAACTTGGAATGTATGGCTTaGCACAGTTTTAAGTTCCTAGATATGAACCCTAAACCCACTTTC | + |
|
Preference number: 1 (lower is better) Translates to: QRKLFPRISNLECMA*HSFKFLDMNPKPTF Trigger: GAAAGTGGGTTTAGGGTTCATATCTAGGAACTTAAAACTGTGCCAAGCCATACATTCCAAGTTAGAAATACGTGGAAATAATTTTCTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
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| 3UTR-3UTR CCA 90 bp | TCACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTCAAGAAGCAAACTGCTaGACAAGCGTCACTTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: SQEANCWTSVTFPPRRLFQEANC*TSVTFP Trigger: GGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTG...AAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000069168.13 ENSMUST00000176480.8 ENSMUST00000176670.8 ENSMUST00000176686.8 |
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| 3UTR CAA 90 bp | AGTGACATGAGCACTCCAGTGGAAGAGTCTTGCAGTGGCATCTTGTaGTATGAAACAGAATGTACTCAGGCTATTGGCACGTGTCAACAC | + |
|
Preference number: 2 (lower is better) Translates to: SDMSTPVEESCSGIL*YETECTQAIGTCQH Trigger: GTGTTGACACGTGCCAATAGCCTGAGTACATTCTGTTTCATACAACAAGATGCCACTGCAAGACTCTTCCACTGGAGTGCTCATGTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
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| 3UTR-3UTR GCA 90 bp | TCACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTTCACAAGAAGCAAACTaGTGGACAAGCGTCACTTTT | + |
|
Preference number: 2 (lower is better) Translates to: SQEANCWTSVTFPPRRLFSQEAN*WTSVTF Trigger: AAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTGA...AAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000069168.13 ENSMUST00000176480.8 ENSMUST00000176670.8 ENSMUST00000176686.8 |
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| 3UTR-3UTR GCA 90 bp | CACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTTTCACAAGAAGCAAACTaGTGGACAAGCGTCACTTTT | + |
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Preference number: 2 (lower is better) Translates to: HKKQTAGQASLFPREDSFSQEAN*WTSVTF Trigger: AAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTGA...AAAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000069168.13 ENSMUST00000176480.8 ENSMUST00000176670.8 ENSMUST00000176686.8 |
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| 3UTR-3UTR TCA 90 bp | ATGTACTCAGGCTATTGGCACGTGTCAACACAGGGAAAGATAAAGTCTTACCCTAGACATGAAATGGCCTaGCATGATCAACAACTATGG | + |
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Preference number: 2 (lower is better) Translates to: MYSGYWHVSTQGKIKSYPRHEMA*HDQQLW Trigger: CCATAGTTGTTGATCATGTCAGGCCATTTCATGTCT...AGGGTAAGACTTTATCTTTCCCTGTGTTGACACGTGCCAATAGCCTGAGTACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
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| 3UTR-3UTR CCA 90 bp | CTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCAATCACAAGAAGCAAACAAGAAGCAAACTGCTaGACAAGCGTCACTTTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: LFSLSMKPYRFSSITRSKQEANC*TSVTFP Trigger: GGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTG...TTTGCTTCTTGTGATTGAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
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| 3UTR-3UTR CCA 90 bp | TTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCCAAGAAGCAAACTGCTaGACAAGCGTCACTTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: LFRSIPVQFIHEALQVQFQEANC*TSVTFP Trigger: GGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTG...GAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
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| 3UTR CAA 90 bp | CAGAAATCTGAATCAAGTACAATACTAGAGCTTTCTTTACGCATCTaGCTGTATAGCCATAATTACACTGCCTATGGCACCATCAGCATC | + |
|
Preference number: 2 (lower is better) Translates to: QKSESSTILELSLRI*LYSHNYTAYGTISI Trigger: GATGCTGATGGTGCCATAGGCAGTGTAATTATGGCTATACAGCAAGATGCGTAAAGAAAGCTCTAGTATTGTACTTGATTCAGATTTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
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| 3UTR-3UTR GCA 90 bp | GCTTTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTCACAAGAAGCAAACTaGTGGACAAGCGTCACTTTT | + |
|
Preference number: 2 (lower is better) Translates to: ALFRSIPVQFIHEALQVQSQEAN*WTSVTF Trigger: AAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTGA...CTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
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| 3UTR-3UTR CCA 90 bp | ATGTACTCAGGCTATTGGCACGTGTCAACACAGGGAAAGATAAAGTCTTACCCTTGCTTTAAAATGAACTaGCAGTGGTATGGATATTTC | + |
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Preference number: 2 (lower is better) Translates to: MYSGYWHVSTQGKIKSYPCFKMN*QWYGYF Trigger: GAAATATCCATACCACTGCCAGTTCATTTTAAAGCA...AGGGTAAGACTTTATCTTTCCCTGTGTTGACACGTGCCAATAGCCTGAGTACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
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| 3UTR-3UTR CCA 90 bp | TTCTTTGGCCTTCTGGTATCAGACAACTTATTTACAAAGGGTGATCATTCAATAAGGAGAAATACCTTGTaGAATCTCACTACTAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: FFGLLVSDNLFTKGDHSIRRNTL*NLTTSC Trigger: GCAGCTAGTAGTGAGATTCCACAAGGTATTTCTCCT...TATTGAATGATCACCCTTTGTAAATAAGTTGTCTGATACCAGAAGGCCAAAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
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| 3UTR-3UTR TCA 90 bp | ACAGTTTATTACAACACTACATCTAGTGTAATCAAATCGGTGCTGTTTACAGACTGTTCAGTTTATCCATaGAGCCTTACAGGTTCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: TVYYNTTSSVIKSVLFTDCSVYP*SLTGSV Trigger: AACTGAACCTGTAAGGCTTCATGGATAAACTGAACA...GTCTGTAAACAGCACCGATTTGATTACACTAGATGTAGTGTTGTAATAAACTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
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| 3UTR CAA 90 bp | CTTATGAAGTCACCACATTCAATAGCTAAAATCTCAAGACTTTCTTaGGCCTTCTGGTATCAGACAACTTATTTACAAAGGGTGATCATT | + |
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Preference number: 2 (lower is better) Translates to: LMKSPHSIAKISRLS*AFWYQTTYLQRVII Trigger: AATGATCACCCTTTGTAAATAAGTTGTCTGATACCAGAAGGCCAAAGAAAGTCTTGAGATTTTAGCTATTGAATGTGGTGACTTCATAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
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| 3UTR TCA 72 bp | TCACTACTAGCTGCAAGGAATGTGACTACACAGCACTaGGCGACGCTGGGACTCAAGACAAGCTCAAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: SLLAARNVTTQH*ATLGLKTSSSC Trigger: ACAGCTTGAGCTTGTCTTGAGTCCCAGCGTCGCTCAGTGCTGTGTAGTCACATTCCTTGCAGCTAGTAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
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| 3UTR TCA 72 bp | TGCAACAACCACTTGGGTAGCAAAACTGAAGTGACATaGGCACTCCAGTGGAAGAGTCTTGCAGTGGCATCT | + |
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Preference number: 3 (lower is better) Translates to: CNNHLGSKTEVT*ALQWKSLAVAS Trigger: AGATGCCACTGCAAGACTCTTCCACTGGAGTGCTCATGTCACTTCAGTTTTGCTACCCAAGTGGTTGTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
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| 3UTR GCA 72 bp | GTCAGGAGAAATACCTTGTGGAATCTCACTACTAGCTaGAAGGAATGTGACTACACAGCACTGAGCGACGCT | + |
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Preference number: 3 (lower is better) Translates to: VRRNTLWNLTTS*KECDYTALSDA Trigger: AGCGTCGCTCAGTGCTGTGTAGTCACATTCCTTGCAGCTAGTAGTGAGATTCCACAAGGTATTTCTCCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
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| 3UTR-3UTR CAA 90 bp | CCGAGAAGACTCTTTTGTCTTGGAAGGTGTTCCTCTTCCTTCAGCTGTTTTCAGGAAGACTCTTTTGTCTaGGAAGGTGTTCCTCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: PRRLFCLGRCSSSFSCFQEDSFV*EGVPLP Trigger: AGGAAGAGGAACACCTTCCAAGACAAAAGAGTCTTC...CTGAAAACAGCTGAAGGAAGAGGAACACCTTCCAAGACAAAAGAGTCTTCTCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176480.8 |
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| 3UTR CCA 72 bp | CTTACAGGTTCAGTTCAATCACAAGAAGCAAACTGCTaGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTT | + |
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Preference number: 3 (lower is better) Translates to: LTGSVQSQEANC*TSVTFPPRRLF Trigger: AAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTGATTGAACTGAACCTGTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
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| 3UTR CCA 72 bp | TTGAATTCAAAGTGCCACGTCAGGAGAAATACCTTGTaGAATCTCACTACTAGCTGCAAGGAATGTGACTAC | + |
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Preference number: 3 (lower is better) Translates to: LNSKCHVRRNTL*NLTTSCKECDY Trigger: GTAGTCACATTCCTTGCAGCTAGTAGTGAGATTCCACAAGGTATTTCTCCTGACGTGGCACTTTGAATTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
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| 3UTR-3UTR CAA 90 bp | TTTATCCATGAAGCCTTACAGGTTCAGTTCAATCACAAGAAGCAAACTGCTGGAGAAGACTCTTTTGTCTaGGAAGGTGTTCCTCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: FIHEALQVQFNHKKQTAGEDSFV*EGVPLP Trigger: AGGAAGAGGAACACCTTCCAAGACAAAAGAGTCTTC...TCCAGCAGTTTGCTTCTTGTGATTGAACTGAACCTGTAAGGCTTCATGGATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
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| 3UTR CCA 72 bp | ACCATGCTTGTTACTAGCGCAGTTTTAGGCCAACAATaGCCATATAGAAAACTGCTGAACAGTCACCTAAAT | + |
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Preference number: 3 (lower is better) Translates to: TMLVTSAVLGQQ*PYRKLLNSHLN Trigger: ATTTAGGTGACTGTTCAGCAGTTTTCTATATGGCCATTGTTGGCCTAAAACTGCGCTAGTAACAAGCATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
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| 3UTR-3UTR CAA 90 bp | GCTTTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGGAAGACTCTTTTGTCTaGGAAGGTGTTCCTCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: ALFRSIPVQFIHEALQVQEDSFV*EGVPLP Trigger: AGGAAGAGGAACACCTTCCAAGACAAAAGAGTCTTC...CTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
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| 3UTR-3UTR CAA 90 bp | TTCTTTGGCCTTCTGGTATCAGACAACTTATTTACAAAGGGTGATCATTCAATACCCGAGAAGACTCTTTaGTCTTGGAAGGTGTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: FFGLLVSDNLFTKGDHSIPEKTL*SWKVFL Trigger: GAGGAACACCTTCCAAGACAAAAGAGTCTTCTCGGG...TATTGAATGATCACCCTTTGTAAATAAGTTGTCTGATACCAGAAGGCCAAAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
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| 3UTR-3UTR CAA 90 bp | ATGTACTCAGGCTATTGGCACGTGTCAACACAGGGAAAGATAAAGTCTTACCCTAAGTCACTTAGAATCTaGCTCATCTTGCTGATGAAA | + |
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Preference number: 3 (lower is better) Translates to: MYSGYWHVSTQGKIKSYPKSLRI*LILLMK Trigger: TTTCATCAGCAAGATGAGCAAGATTCTAAGTGACTT...AGGGTAAGACTTTATCTTTCCCTGTGTTGACACGTGCCAATAGCCTGAGTACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
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| 3UTR-3UTR CAA 90 bp | TATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCAGAAGACTCTTTTGTCTaGGAAGGTGTTCCTCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: YSDLFLFSLSMKPYRFSSEDSFV*EGVPLP Trigger: AGGAAGAGGAACACCTTCCAAGACAAAAGAGTCTTC...TGAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
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| 3UTR TCA 72 bp | ACAAGCCTTTCCCTGAGGTGTAAACATCAAATAACGTaGACAGCTTTACACATCAGCCCCATAAACAGTTTA | + |
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Preference number: 3 (lower is better) Translates to: TSLSLRCKHQIT*TALHISPINSL Trigger: TAAACTGTTTATGGGGCTGATGTGTAAAGCTGTTCACGTTATTTGATGTTTACACCTCAGGGAAAGGCTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
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| 3UTR TCA 72 bp | TTACTCCCATGGTGGAGTTTTAGGGTACTCACTCTCTaGTATGAAAAACTGCTCGTAGTATTTACTATCCAC | + |
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Preference number: 3 (lower is better) Translates to: LLPWWSFRVLTL*YEKLLVVFTIH Trigger: GTGGATAGTAAATACTACGAGCAGTTTTTCATATCAGAGAGTGAGTACCCTAAAACTCCACCATGGGAGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
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| 3UTR GCA 72 bp | TTTCCTTTCCCTCAAAGCAGTATATTGAATTCAAAGTaGCACGTCAGGAGAAATACCTTGTGGAATCTCACT | + |
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Preference number: 3 (lower is better) Translates to: FPFPQSSILNSK*HVRRNTLWNLT Trigger: AGTGAGATTCCACAAGGTATTTCTCCTGACGTGGCACTTTGAATTCAATATACTGCTTTGAGGGAAAGGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
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| 3UTR GCA 72 bp | ATATATGGAGCAAAGGTGTTTACAGAATTGATAACCTaGCACATTCAAAAGATTCACAGTGCTCTGTCCCCA | + |
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Preference number: 3 (lower is better) Translates to: IYGAKVFTELIT*HIQKIHSALSP Trigger: TGGGGACAGAGCACTGTGAATCTTTTGAATGTGGCAGGTTATCAATTCTGTAAACACCTTTGCTCCATATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
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| 3UTR CCA 72 bp | CTGTGCAGGGCTGTAAACTACTTTGCTAATATACCATaGGATGCAAAGGAAGGAGTAATAGACCTTTTCTTA | + |
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Preference number: 3 (lower is better) Translates to: LCRAVNYFANIP*DAKEGVIDLFL Trigger: TAAGAAAAGGTCTATTACTCCTTCCTTTGCATCCCATGGTATATTAGCAAAGTAGTTTACAGCCCTGCACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
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| 3UTR TCA 72 bp | AAGTCTAGTTTTCATGGACATCAACAGAATGCCTACTaGATGGAATCTCACCTTACCTTTTGCACAGAAATC | + |
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Preference number: 3 (lower is better) Translates to: KSSFHGHQQNAY*MESHLTFCTEI Trigger: GATTTCTGTGCAAAAGGTAAGGTGAGATTCCATTCAGTAGGCATTCTGTTGATGTCCATGAAAACTAGACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
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| 3UTR-3UTR CAA 90 bp | TTCTTTGGCCTTCTGGTATCAGACAACTTATTTACAAAGGGTGATCATTCAATACACATCAAAGAATCATaGCCCATTGAATACCACCTG | + |
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Preference number: 3 (lower is better) Translates to: FFGLLVSDNLFTKGDHSIHIKES*PIEYHL Trigger: CAGGTGGTATTCAATGGGCAATGATTCTTTGATGTG...TATTGAATGATCACCCTTTGTAAATAAGTTGTCTGATACCAGAAGGCCAAAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
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| 3UTR TCA 72 bp | CTACAAATCTATTTCCTTTCCCTCAAAGCAGTATATTaGATTCAAAGTGCCACGTCAGGAGAAATACCTTGT | + |
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Preference number: 3 (lower is better) Translates to: LQIYFLSLKAVY*IQSATSGEIPC Trigger: ACAAGGTATTTCTCCTGACGTGGCACTTTGAATTCAATATACTGCTTTGAGGGAAAGGAAATAGATTTGTAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
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| 3UTR CCA 72 bp | CTAGTTTTCATGGACATCAACAGAATGCCTACTGAATaGAATCTCACCTTACCTTTTGCACAGAAATCTTAT | + |
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Preference number: 3 (lower is better) Translates to: LVFMDINRMPTE*NLTLPFAQKSY Trigger: ATAAGATTTCTGTGCAAAAGGTAAGGTGAGATTCCATTCAGTAGGCATTCTGTTGATGTCCATGAAAACTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
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| 3UTR TCA 72 bp | GTCGTGTGTTATAGTTGCAGTCCTCAAAATACATTATaGTTCACATCAAAGAATCATTGCCCATTGAATACC | + |
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Preference number: 3 (lower is better) Translates to: VVCYSCSPQNTL*FTSKNHCPLNT Trigger: GGTATTCAATGGGCAATGATTCTTTGATGTGAATCATAATGTATTTTGAGGACTGCAACTATAACACACGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
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| 3UTR CCA 72 bp | TTATTTCCACGTATTTCTAACTTGGAATGTATGGCTTaGCACAGTTTTAAGTTCCTAGATATGAACCCTAAA | + |
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Preference number: 3 (lower is better) Translates to: LFPRISNLECMA*HSFKFLDMNPK Trigger: TTTAGGGTTCATATCTAGGAACTTAAAACTGTGCCAAGCCATACATTCCAAGTTAGAAATACGTGGAAATAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
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| 3UTR CCA 72 bp | CCACCCTCTTACATCTACTTCACAATAAATACCGTTTaGTATAGCAAAAGTACAGTAATCCAGAAAAACATA | + |
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Preference number: 3 (lower is better) Translates to: PPSYIYFTINTV*YSKSTVIQKNI Trigger: TATGTTTTTCTGGATTACTGTACTTTTGCTATACCAAACGGTATTTATTGTGAAGTAGATGTAAGAGGGTGG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
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| CDS-3UTR CCA 90 bp | TCACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTAGGAGGTGGAGGACCTaGTGGACCAGGTGGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SQEANCWTSVTFPPRRLFRRWRT*WTRWAR Trigger: CCTGGCCCACCTGGTCCACCAGGTCCTCCACCTCCT...AAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
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| CDS-3UTR CCA 90 bp | TCACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTCGGGGCACCTGGAGGTaGTCCCGGAAGATGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SQEANCWTSVTFPPRRLFRGTWR*SRKMWR Trigger: CCTCCACATCTTCCGGGACCACCTCCAGGTGCCCCG...AAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | CACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTTCGGGGCACCTGGAGGTaGTCCCGGAAGATGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HKKQTAGQASLFPREDSFRGTWR*SRKMWR Trigger: CCTCCACATCTTCCGGGACCACCTCCAGGTGCCCCG...AAAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TCACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTTGGTGGCGGGGCACCTaGAGGTGGTCCCGGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SQEANCWTSVTFPPRRLFWWRGT*RWSRKM Trigger: CATCTTCCGGGACCACCTCCAGGTGCCCCGCCACCA...AAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | CACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTTCCCTCCTGGTCCTGCTaGCCCAGGAAATCTGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HKKQTAGQASLFPREDSFPSWSC*PRKSVP Trigger: GGGGACAGATTTCCTGGGCCAGCAGGACCAGGAGGG...AAAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGTACAAACCTCTCAAGCTGCTCATTACCTCAACCTATGGCACAGACCTGCCTGGAGGTGGAGGTaGTCCCTGCTGTGGAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RKVQTSQAAHYLNLWHRPAWRWR*SLLWRR Trigger: CCGCCTCCACAGCAGGGACCACCTCCACCTCCAGGC...AGGTCTGTGCCATAGGTTGAGGTAATGAGCAGCTTGAGAGGTTTGTACTTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
||
| CDS-3UTR GCA 90 bp | CACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTTGGACCCAGCGGAGGCTaGCCAAAAGGTTGTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HKKQTAGQASLFPREDSFGPSGG*PKGCPG Trigger: TCCTGGACAACCTTTTGGGCAGCCTCCGCTGGGTCC...AAAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | CACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTTAACCTGACCAGGAGGTaGAGGACCTGGTGGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HKKQTAGQASLFPREDSFNLTRR*RTWWTR Trigger: CCTGGTCCACCAGGTCCTCCACCTCCTGGTCAGGTT...AAAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCCCCGAGAAGACTCTTTTGTCTTGGAAGGTGTTCCTCTTCCTTCAGCTGTAACCTGACCAGGAGGTaGAGGACCTGGTGGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPPRRLFCLGRCSSSFSCNLTRR*RTWWTR Trigger: CCTGGTCCACCAGGTCCTCCACCTCCTGGTCAGGTT...ACAGCTGAAGGAAGAGGAACACCTTCCAAGACAAAAGAGTCTTCTCGGGGGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TCACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTATTCACATGTGGAGCTaGTGGCGGGGCACCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SQEANCWTSVTFPPRRLFIHMWS*WRGTWR Trigger: CCTCCAGGTGCCCCGCCACCAGCTCCACATGTGAAT...AAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR TCA 90 bp | TCACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTCGTCCTCTACCACCTTaGGGAAACGCTGCGCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SQEANCWTSVTFPPRRLFRPLPP*GNAARE Trigger: TTCACGCGCAGCGTTTCCTCAAGGTGGTAGAGGACG...AAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCCCCGAGAAGACTCTTTTGTCTTGGAAGGTGTTCCTCTTCCTTCAGCTGTCGTCCTCTACCACCTTaGGGAAACGCTGCGCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FPPRRLFCLGRCSSSFSCRPLPP*GNAARE Trigger: TTCACGCGCAGCGTTTCCTCAAGGTGGTAGAGGACG...ACAGCTGAAGGAAGAGGAACACCTTCCAAGACAAAAGAGTCTTCTCGGGGGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | GACTCTTTTGTCTTGGAAGGTGTTCCTCTTCCTTCAGCTGTAATGTGTCAAAATGCCTGGAGGTGGAGGTaGTCCCTGCTGTGGAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: DSFVLEGVPLPSAVMCQNAWRWR*SLLWRR Trigger: CCGCCTCCACAGCAGGGACCACCTCCACCTCCAGGC...ATTTTGACACATTACAGCTGAAGGAAGAGGAACACCTTCCAAGACAAAAGAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176686.8 |
||
| CDS-3UTR GCA 90 bp | ATGTACTCAGGCTATTGGCACGTGTCAACACAGGGAAAGATAAAGTCTTACCCTTGGCCCTCCTGGTCCTaGTGGCCCAGGAAATCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: MYSGYWHVSTQGKIKSYPWPSWS*WPRKSV Trigger: GACAGATTTCCTGGGCCAGCAGGACCAGGAGGGCCA...AGGGTAAGACTTTATCTTTCCCTGTGTTGACACGTGCCAATAGCCTGAGTACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
||
| CDS-3UTR CCA 90 bp | AGACTCTTTTGTCTTGGAAGGTGTTCCTCTTCCTTCAGCTGTAATGTGTCAAAAAGGAGGTGGAGGACCTaGTGGACCAGGTGGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLFCLGRCSSSFSCNVSKRRWRT*WTRWAR Trigger: CCTGGCCCACCTGGTCCACCAGGTCCTCCACCTCCT...TTTTGACACATTACAGCTGAAGGAAGAGGAACACCTTCCAAGACAAAAGAGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TTTATCCATGAAGCCTTACAGGTTCAGTTCAATCACAAGAAGCAAACTGCTGGAAGGTGGTCCCTGCTGTaGAGGCGGTGGACCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FIHEALQVQFNHKKQTAGRWSLL*RRWTWR Trigger: CCTCCAGGTCCACCGCCTCCACAGCAGGGACCACCT...TCCAGCAGTTTGCTTCTTGTGATTGAACTGAACCTGTAAGGCTTCATGGATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | CACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTTTGGTCCCGGAAGATGTaGAGGAGGAGCAAGTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HKKQTAGQASLFPREDSFWSRKM*RRSKCE Trigger: CTCACACTTGCTCCTCCTCCACATCTTCCGGGACCA...AAAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TCACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTGTCACCCCTATCATATaGGGGAGGTCGGCCATATGG | + |
|
Preference number: 4 (lower is better) Translates to: SQEANCWTSVTFPPRRLFVTPII*GRSAIW Trigger: CCATATGGCCGACCTCCCCCATATGATAGGGGTGAC...AAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000069168.13 ENSMUST00000176480.8 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCCCCGAGAAGACTCTTTTGTCTTGGAAGGTGTTCCTCTTCCTTCAGCTGTGTCACCCCTATCATATaGGGGAGGTCGGCCATATGG | + |
|
Preference number: 4 (lower is better) Translates to: FPPRRLFCLGRCSSSFSCVTPII*GRSAIW Trigger: CCATATGGCCGACCTCCCCCATATGATAGGGGTGAC...ACAGCTGAAGGAAGAGGAACACCTTCCAAGACAAAAGAGTCTTCTCGGGGGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000176480.8 ENSMUST00000176686.8 |
||
| CDS-3UTR TCA 90 bp | CTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCAATCACAAGAAGCAAAAGGAAACGCTGCGCGTaGACCGCCTCCTGGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: LFSLSMKPYRFSSITRSKRKRCA*TASWRT Trigger: GGTCCTCCAGGAGGCGGTTCACGCGCAGCGTTTCCT...TTTGCTTCTTGTGATTGAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR GCA 90 bp | GCTTTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGGGTGGAGGTGGTCCCTaGTGTGGAGGCGGTGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: ALFRSIPVQFIHEALQVQGGGGP*CGGGGP Trigger: AGGTCCACCGCCTCCACAGCAGGGACCACCTCCACC...CTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TTTATCCATGAAGCCTTACAGGTTCAGTTCAATCACAAGAAGCAAACTGCTGGACCCTCCTGGTCCTGCTaGCCCAGGAAATCTGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FIHEALQVQFNHKKQTAGPSWSC*PRKSVP Trigger: GGGGACAGATTTCCTGGGCCAGCAGGACCAGGAGGG...TCCAGCAGTTTGCTTCTTGTGATTGAACTGAACCTGTAAGGCTTCATGGATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGAGGAGGTGGAGGACCTaGTGGACCAGGTGGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALFRSIPVQFIHEALQVQRRWRT*WTRWAR Trigger: CCTGGCCCACCTGGTCCACCAGGTCCTCCACCTCCT...CTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCAGCCTGGAGGTGGAGGTaGTCCCTGCTGTGGAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: YSDLFLFSLSMKPYRFSSAWRWR*SLLWRR Trigger: CCGCCTCCACAGCAGGGACCACCTCCACCTCCAGGC...TGAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR TCA 90 bp | TCACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTCCCAGACATCTGTCCTaGCTGTGTAGTTTTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SQEANCWTSVTFPPRRLFPRHLS*LCSFPG Trigger: TCCAGGAAAACTACACAGTCAGGACAGATGTCTGGG...AAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR TCA 90 bp | CACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTTTTGGACTCGATTCCATaGAGGCAATCCTGCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HKKQTAGQASLFPREDSFLDSIP*RQSCRE Trigger: CTCTCTGCAGGATTGCCTTCATGGAATCGAGTCCAA...AAAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000069168.13 ENSMUST00000176480.8 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR GCA 90 bp | TCACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTGTACACAACGTTTGGTaGGGCTCCTTTACCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: SQEANCWTSVTFPPRRLFVHNVW*GSFTHI Trigger: GATGTGGGTAAAGGAGCCGCACCAAACGTTGTGTAC...AAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR GCA 90 bp | TTTATCCATGAAGCCTTACAGGTTCAGTTCAATCACAAGAAGCAAACTGCTGGATGGCCCTCCTGGTCCTaGTGGCCCAGGAAATCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FIHEALQVQFNHKKQTAGWPSWS*WPRKSV Trigger: GACAGATTTCCTGGGCCAGCAGGACCAGGAGGGCCA...TCCAGCAGTTTGCTTCTTGTGATTGAACTGAACCTGTAAGGCTTCATGGATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TCACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTGTAGTCGCGATCTTCTaGGGCATCGCCATTATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SQEANCWTSVTFPPRRLFVVAIF*GIAIIC Trigger: GCAAATAATGGCGATGCCCCAGAAGATCGCGACTAC...AAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TTTATCCATGAAGCCTTACAGGTTCAGTTCAATCACAAGAAGCAAACTGCTGGATGGAAAAGGTGGAGGTaGCCCTCCTGGTCCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FIHEALQVQFNHKKQTAGWKRWR*PSWSCW Trigger: CCAGCAGGACCAGGAGGGCCACCTCCACCTTTTCCA...TCCAGCAGTTTGCTTCTTGTGATTGAACTGAACCTGTAAGGCTTCATGGATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | AGACTCTTTTGTCTTGGAAGGTGTTCCTCTTCCTTCAGCTGTAATGTGTCAAAATGGAAAAGGTGGAGGTaGCCCTCCTGGTCCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLFCLGRCSSSFSCNVSKWKRWR*PSWSCW Trigger: CCAGCAGGACCAGGAGGGCCACCTCCACCTTTTCCA...TTTTGACACATTACAGCTGAAGGAAGAGGAACACCTTCCAAGACAAAAGAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCAGGTGGTCCCTGCTGTaGAGGCGGTGGACCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFRSIPVQFIHEALQVQFRWSLL*RRWTWR Trigger: CCTCCAGGTCCACCGCCTCCACAGCAGGGACCACCT...GAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TGTGATTACAAGAATCCCAATTTCCAGATTTTAGAAGTACACAATGAGTCCTCTGCCTGGAGGTGGAGGTaGTCCCTGCTGTGGAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: CDYKNPNFQILEVHNESSAWRWR*SLLWRR Trigger: CCGCCTCCACAGCAGGGACCACCTCCACCTCCAGGC...AGAGGACTCATTGTGTACTTCTAAAATCTGGAAATTGGGATTCTTGTAATCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR CCA 90 bp | TATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCACGGGGCACCTGGAGGTaGTCCCGGAAGATGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YSDLFLFSLSMKPYRFSSRGTWR*SRKMWR Trigger: CCTCCACATCTTCCGGGACCACCTCCAGGTGCCCCG...TGAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCTGGTGGCGGGGCACCTaGAGGTGGTCCCGGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LFRSIPVQFIHEALQVQFWWRGT*RWSRKM Trigger: CATCTTCCGGGACCACCTCCAGGTGCCCCGCCACCA...GAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TTTATCCATGAAGCCTTACAGGTTCAGTTCAATCACAAGAAGCAAACTGCTGGAGGGAGGTCGGCCATATaGGTCTGTTGGTGGTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: FIHEALQVQFNHKKQTAGGRSAI*VCWWWT Trigger: GGTCCACCACCAACAGACCCATATGGCCGACCTCCC...TCCAGCAGTTTGCTTCTTGTGATTGAACTGAACCTGTAAGGCTTCATGGATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | GACTCTTTTGTCTTGGAAGGTGTTCCTCTTCCTTCAGCTGTAATGTGTCAAAATGGGAGGTCGGCCATATaGGTCTGTTGGTGGTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: DSFVLEGVPLPSAVMCQNGRSAI*VCWWWT Trigger: GGTCCACCACCAACAGACCCATATGGCCGACCTCCC...ATTTTGACACATTACAGCTGAAGGAAGAGGAACACCTTCCAAGACAAAAGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCCCCGAGAAGACTCTTTTGTCTTGGAAGGTGTTCCTCTTCCTTCAGCTGTCAGACCCATAGGACTTaGACTCGATTCCATGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FPPRRLFCLGRCSSSFSCQTHRT*TRFHEG Trigger: GCCTTCATGGAATCGAGTCCAAGTCCTATGGGTCTG...ACAGCTGAAGGAAGAGGAACACCTTCCAAGACAAAAGAGTCTTCTCGGGGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000176480.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TCACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTCAGACCCATAGGACTTaGACTCGATTCCATGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SQEANCWTSVTFPPRRLFQTHRT*TRFHEG Trigger: GCCTTCATGGAATCGAGTCCAAGTCCTATGGGTCTG...AAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069168.13 ENSMUST00000176480.8 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| 3UTR CAA 72 bp | CTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTaGTCTTGGAAGGTGTTCCTCTTCCTTCAGCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LDKRHFSPEKTL*SWKVFLFLQLF Trigger: AAACAGCTGAAGGAAGAGGAACACCTTCCAAGACAAAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176480.8 |
||
| CDS-3UTR TCA 90 bp | CACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTTTGGACCTCGACTATCTaGTGTTGGCATGCCACTATT | + |
|
Preference number: 4 (lower is better) Translates to: HKKQTAGQASLFPREDSFWTSTI*CWHATI Trigger: AATAGTGGCATGCCAACATCAGATAGTCGAGGTCCA...AAAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR TCA 90 bp | CCGAGAAGACTCTTTTGTCTTGGAAGGTGTTCCTCTTCCTTCAGCTGTTTTCAGATGGTCCCGTTCTCTTaGTCGTTCACGTCTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PRRLFCLGRCSSSFSCFQMVPFS*SFTSSG Trigger: TCCAGAAGACGTGAACGATCAAGAGAACGGGACCAT...CTGAAAACAGCTGAAGGAAGAGGAACACCTTCCAAGACAAAAGAGTCTTCTCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176480.8 |
||
| CDS-3UTR GCA 90 bp | CTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCAATCACAAGAAGCAAAGGACCCAGCGGAGGCTaGCCAAAAGGTTGTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LFSLSMKPYRFSSITRSKGPSGG*PKGCPG Trigger: TCCTGGACAACCTTTTGGGCAGCCTCCGCTGGGTCC...TTTGCTTCTTGTGATTGAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR GCA 90 bp | ACAGTTTATTACAACACTACATCTAGTGTAATCAAATCGGTGCTGTTTACAGACGGTGGAGGTGGTCCCTaGTGTGGAGGCGGTGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: TVYYNTTSSVIKSVLFTDGGGGP*CGGGGP Trigger: AGGTCCACCGCCTCCACAGCAGGGACCACCTCCACC...GTCTGTAAACAGCACCGATTTGATTACACTAGATGTAGTGTTGTAATAAACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR GCA 90 bp | TGTGATTACAAGAATCCCAATTTCCAGATTTTAGAAGTACACAATGAGTCCTCTGGTGGAGGTGGTCCCTaGTGTGGAGGCGGTGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: CDYKNPNFQILEVHNESSGGGGP*CGGGGP Trigger: AGGTCCACCGCCTCCACAGCAGGGACCACCTCCACC...AGAGGACTCATTGTGTACTTCTAAAATCTGGAAATTGGGATTCTTGTAATCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR CCA 90 bp | TTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCCCCTCCTGGTCCTGCTaGCCCAGGAAATCTGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LFRSIPVQFIHEALQVQFPSWSC*PRKSVP Trigger: GGGGACAGATTTCCTGGGCCAGCAGGACCAGGAGGG...GAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TGTGATTACAAGAATCCCAATTTCCAGATTTTAGAAGTACACAATGAGTCCTCTAGGAGGTGGAGGACCTaGTGGACCAGGTGGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CDYKNPNFQILEVHNESSRRWRT*WTRWAR Trigger: CCTGGCCCACCTGGTCCACCAGGTCCTCCACCTCCT...AGAGGACTCATTGTGTACTTCTAAAATCTGGAAATTGGGATTCTTGTAATCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR CCA 90 bp | TGTGATTACAAGAATCCCAATTTCCAGATTTTAGAAGTACACAATGAGTCCTCTAGGTGGTCCCTGCTGTaGAGGCGGTGGACCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CDYKNPNFQILEVHNESSRWSLL*RRWTWR Trigger: CCTCCAGGTCCACCGCCTCCACAGCAGGGACCACCT...AGAGGACTCATTGTGTACTTCTAAAATCTGGAAATTGGGATTCTTGTAATCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR CCA 90 bp | TCAGATGCTTCCAGAAGATTAAATCAGAACAAGTACTTGGACCACTTAAAATGTCGGGGCACCTGGAGGTaGTCCCGGAAGATGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SDASRRLNQNKYLDHLKCRGTWR*SRKMWR Trigger: CCTCCACATCTTCCGGGACCACCTCCAGGTGCCCCG...ACATTTTAAGTGGTCCAAGTACTTGTTCTGATTTAATCTTCTGGAAGCATCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCCAGAAGATTAAATCAGAACAAGTACTTGGACCACTTAAAATGTAGGTATTGGTGGCGGGGCACCTaGAGGTGGTCCCGGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: ASRRLNQNKYLDHLKCRYWWRGT*RWSRKM Trigger: CATCTTCCGGGACCACCTCCAGGTGCCCCGCCACCA...ATACCTACATTTTAAGTGGTCCAAGTACTTGTTCTGATTTAATCTTCTGGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCAATCACAAGAAGCAAAATTCACATGTGGAGCTaGTGGCGGGGCACCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFSLSMKPYRFSSITRSKIHMWS*WRGTWR Trigger: CCTCCAGGTGCCCCGCCACCAGCTCCACATGTGAAT...TTTGCTTCTTGTGATTGAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGATTCACATGTGGAGCTaGTGGCGGGGCACCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALFRSIPVQFIHEALQVQIHMWS*WRGTWR Trigger: CCTCCAGGTGCCCCGCCACCAGCTCCACATGTGAAT...CTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCCCCGAGAAGACTCTTTTGTCTTGGAAGGTGTTCCTCTTCCTTCAGCTGTTCCCGTGATCTACTATaGTCCCGTTCTCTTGATCGT | + |
|
Preference number: 4 (lower is better) Translates to: FPPRRLFCLGRCSSSFSCSRDLL*SRSLDR Trigger: ACGATCAAGAGAACGGGACCATAGTAGATCACGGGA...ACAGCTGAAGGAAGAGGAACACCTTCCAAGACAAAAGAGTCTTCTCGGGGGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000176480.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | CACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTTCTACTCCGAGATTTATaGCGACGACTCTTTTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: HKKQTAGQASLFPREDSFLLRDL*RRLFSR Trigger: ACGGGAAAAGAGTCGTCGCCATAAATCTCGGAGTAG...AAAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000069168.13 ENSMUST00000176480.8 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TCACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTCTTGATCAAATTTCCTaGAAAAGGTGGAGGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SQEANCWTSVTFPPRRLFLDQIS*KRWRWP Trigger: GGGCCACCTCCACCTTTTCCAGGAAATTTGATCAAG...AAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176670.8 |
||
| CDS-3UTR TCA 90 bp | CTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCAATCACAAGAAGCAAACGTCCTCTACCACCTTaGGGAAACGCTGCGCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LFSLSMKPYRFSSITRSKRPLPP*GNAARE Trigger: TTCACGCGCAGCGTTTCCTCAAGGTGGTAGAGGACG...TTTGCTTCTTGTGATTGAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR GCA 90 bp | CACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTTGGCATCGCCATTATTTaGAGATGGAGAGATGACATC | + |
|
Preference number: 4 (lower is better) Translates to: HKKQTAGQASLFPREDSFGIAII*RWRDDI Trigger: GATGTCATCTCTCCATCTGCAAATAATGGCGATGCC...AAAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR GCA 90 bp | TTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCTGGCCCTCCTGGTCCTaGTGGCCCAGGAAATCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LFRSIPVQFIHEALQVQFWPSWS*WPRKSV Trigger: GACAGATTTCCTGGGCCAGCAGGACCAGGAGGGCCA...GAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCCAGAAGATTAAATCAGAACAAGTACTTGGACCACTTAAAATGTAGGTATCCCTCCTGGTCCTGCTaGCCCAGGAAATCTGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ASRRLNQNKYLDHLKCRYPSWSC*PRKSVP Trigger: GGGGACAGATTTCCTGGGCCAGCAGGACCAGGAGGG...ATACCTACATTTTAAGTGGTCCAAGTACTTGTTCTGATTTAATCTTCTGGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR CCA 90 bp | TATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCATGGAAAAGGTGGAGGTaGCCCTCCTGGTCCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YSDLFLFSLSMKPYRFSSWKRWR*PSWSCW Trigger: CCAGCAGGACCAGGAGGGCCACCTCCACCTTTTCCA...TGAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | AGACTCTTTTGTCTTGGAAGGTGTTCCTCTTCCTTCAGCTGTAATGTGTCAAAAAGGAAAAAGAACTGGTaGTGGAGGGCGGTCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RLFCLGRCSSSFSCNVSKRKKNW*WRAVSS Trigger: CGAGGAGACCGCCCTCCACCACCAGTTCTTTTTCCT...TTTTGACACATTACAGCTGAAGGAAGAGGAACACCTTCCAAGACAAAAGAGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TTTATCCATGAAGCCTTACAGGTTCAGTTCAATCACAAGAAGCAAACTGCTGGATCCAGGAAAAAGAACTaGTGGTGGAGGGCGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FIHEALQVQFNHKKQTAGSRKKN*WWRAVS Trigger: GGAGACCGCCCTCCACCACCAGTTCTTTTTCCTGGA...TCCAGCAGTTTGCTTCTTGTGATTGAACTGAACCTGTAAGGCTTCATGGATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TTTATCCATGAAGCCTTACAGGTTCAGTTCAATCACAAGAAGCAAACTGCTGGATGGTCCCGGAAGATGTaGAGGAGGAGCAAGTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FIHEALQVQFNHKKQTAGWSRKM*RRSKCE Trigger: CTCACACTTGCTCCTCCTCCACATCTTCCGGGACCA...TCCAGCAGTTTGCTTCTTGTGATTGAACTGAACCTGTAAGGCTTCATGGATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | AGACTCTTTTGTCTTGGAAGGTGTTCCTCTTCCTTCAGCTGTTTTCAGATGCTTGCCATATGGGTCTGTTaGTGGTGGACCTCGACTATC | + |
|
Preference number: 4 (lower is better) Translates to: RLFCLGRCSSSFSCFQMLAIWVC*WWTSTI Trigger: GATAGTCGAGGTCCACCACCAACAGACCCATATGGC...AAGCATCTGAAAACAGCTGAAGGAAGAGGAACACCTTCCAAGACAAAAGAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176480.8 |
||
| CDS-3UTR CCA 90 bp | TATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCAGGGAGGTCGGCCATATaGGTCTGTTGGTGGTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: YSDLFLFSLSMKPYRFSSGRSAI*VCWWWT Trigger: GGTCCACCACCAACAGACCCATATGGCCGACCTCCC...TGAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TTTATCCATGAAGCCTTACAGGTTCAGTTCAATCACAAGAAGCAAACTGCTGGAGTCACCCCTATCATATaGGGGAGGTCGGCCATATGG | + |
|
Preference number: 4 (lower is better) Translates to: FIHEALQVQFNHKKQTAGVTPII*GRSAIW Trigger: CCATATGGCCGACCTCCCCCATATGATAGGGGTGAC...TCCAGCAGTTTGCTTCTTGTGATTGAACTGAACCTGTAAGGCTTCATGGATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR TCA 90 bp | AAGACTCTTTTGTCTTGGAAGGTGTTCCTCTTCCTTCAGCTGTTTTCAGATGCTACGACTCTTTTCCCGTaGTCTACTATGGTCCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KTLLSWKVFLFLQLFSDATTLFP*STMVPF Trigger: GAACGGGACCATAGTAGATCACGGGAAAAGAGTCGT...AGCATCTGAAAACAGCTGAAGGAAGAGGAACACCTTCCAAGACAAAAGAGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176480.8 |
||
| CDS-3UTR GCA 90 bp | TCACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTATGTCCACCATATTCTaGTTCCTGGTTGAACTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SQEANCWTSVTFPPRRLFMSTIF*FLVELF Trigger: GAAGAGTTCAACCAGGAAGCAGAATATGGTGGACAT...AAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR GCA 90 bp | TCAGATGCTTCCAGAAGATTAAATCAGAACAAGTACTTGGACCACTTAAAATGTTGGCCCTCCTGGTCCTaGTGGCCCAGGAAATCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SDASRRLNQNKYLDHLKCWPSWS*WPRKSV Trigger: GACAGATTTCCTGGGCCAGCAGGACCAGGAGGGCCA...ACATTTTAAGTGGTCCAAGTACTTGTTCTGATTTAATCTTCTGGAAGCATCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR GCA 90 bp | TGTGATTACAAGAATCCCAATTTCCAGATTTTAGAAGTACACAATGAGTCCTCTGGACCCAGCGGAGGCTaGCCAAAAGGTTGTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CDYKNPNFQILEVHNESSGPSGG*PKGCPG Trigger: TCCTGGACAACCTTTTGGGCAGCCTCCGCTGGGTCC...AGAGGACTCATTGTGTACTTCTAAAATCTGGAAATTGGGATTCTTGTAATCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR CCA 90 bp | CACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTTGAACTGCTTATTGCATaGAGTTACAACAGGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HKKQTAGQASLFPREDSFELLIA*SYNRTL Trigger: CAGAGTCCTGTTGTAACTCCATGCAATAAGCAGTTC...AAAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCCCCGAGAAGACTCTTTTGTCTTGGAAGGTGTTCCTCTTCCTTCAGCTGTGAACTGCTTATTGCATaGAGTTACAACAGGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FPPRRLFCLGRCSSSFSCELLIA*SYNRTL Trigger: CAGAGTCCTGTTGTAACTCCATGCAATAAGCAGTTC...ACAGCTGAAGGAAGAGGAACACCTTCCAAGACAAAAGAGTCTTCTCGGGGGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TCAGATGCTTCCAGAAGATTAAATCAGAACAAGTACTTGGACCACTTAAAATGTTGGAAAAGGTGGAGGTaGCCCTCCTGGTCCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SDASRRLNQNKYLDHLKCWKRWR*PSWSCW Trigger: CCAGCAGGACCAGGAGGGCCACCTCCACCTTTTCCA...ACATTTTAAGTGGTCCAAGTACTTGTTCTGATTTAATCTTCTGGAAGCATCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR CCA 90 bp | TGTGATTACAAGAATCCCAATTTCCAGATTTTAGAAGTACACAATGAGTCCTCTAACCTGACCAGGAGGTaGAGGACCTGGTGGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CDYKNPNFQILEVHNESSNLTRR*RTWWTR Trigger: CCTGGTCCACCAGGTCCTCCACCTCCTGGTCAGGTT...AGAGGACTCATTGTGTACTTCTAAAATCTGGAAATTGGGATTCTTGTAATCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR CCA 90 bp | TTTATCCATGAAGCCTTACAGGTTCAGTTCAATCACAAGAAGCAAACTGCTGGAAAAAAGAACTGGTGGTaGAGGGCGGTCTCCTCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FIHEALQVQFNHKKQTAGKKNWW*RAVSSV Trigger: AACCGAGGAGACCGCCCTCCACCACCAGTTCTTTTT...TCCAGCAGTTTGCTTCTTGTGATTGAACTGAACCTGTAAGGCTTCATGGATAAA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | AGACTCTTTTGTCTTGGAAGGTGTTCCTCTTCCTTCAGCTGTAATGTGTCAAAAAAAAAGAACTGGTGGTaGAGGGCGGTCTCCTCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RLFCLGRCSSSFSCNVSKKKNWW*RAVSSV Trigger: AACCGAGGAGACCGCCCTCCACCACCAGTTCTTTTT...TTTTGACACATTACAGCTGAAGGAAGAGGAACACCTTCCAAGACAAAAGAGTCT 46% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCAATCACAAGAAGCAAAAGGAAAAAGAACTGGTaGTGGAGGGCGGTCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LFSLSMKPYRFSSITRSKRKKNW*WRAVSS Trigger: CGAGGAGACCGCCCTCCACCACCAGTTCTTTTTCCT...TTTGCTTCTTGTGATTGAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTCCAGGAAAAAGAACTaGTGGTGGAGGGCGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALFRSIPVQFIHEALQVQSRKKN*WWRAVS Trigger: GGAGACCGCCCTCCACCACCAGTTCTTTTTCCTGGA...CTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCAATCACAAGAAGCAAATGGTCCCGGAAGATGTaGAGGAGGAGCAAGTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LFSLSMKPYRFSSITRSKWSRKM*RRSKCE Trigger: CTCACACTTGCTCCTCCTCCACATCTTCCGGGACCA...TTTGCTTCTTGTGATTGAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TCAGATGCTTCCAGAAGATTAAATCAGAACAAGTACTTGGACCACTTAAAATGTATTCACATGTGGAGCTaGTGGCGGGGCACCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SDASRRLNQNKYLDHLKCIHMWS*WRGTWR Trigger: CCTCCAGGTGCCCCGCCACCAGCTCCACATGTGAAT...ACATTTTAAGTGGTCCAAGTACTTGTTCTGATTTAATCTTCTGGAAGCATCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCCAGAAGATTAAATCAGAACAAGTACTTGGACCACTTAAAATGTAGGTATGGGAGGTCGGCCATATaGGTCTGTTGGTGGTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: ASRRLNQNKYLDHLKCRYGRSAI*VCWWWT Trigger: GGTCCACCACCAACAGACCCATATGGCCGACCTCCC...ATACCTACATTTTAAGTGGTCCAAGTACTTGTTCTGATTTAATCTTCTGGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176480.8 ENSMUST00000177145.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGTACAAACCTCTCAAGCTGCTCATTACCTCAACCTATGGCACAGACCTCTACTCCGAGATTTATaGCGACGACTCTTTTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: RKVQTSQAAHYLNLWHRPLLRDL*RRLFSR Trigger: ACGGGAAAAGAGTCGTCGCCATAAATCTCGGAGTAG...AGGTCTGTGCCATAGGTTGAGGTAATGAGCAGCTTGAGAGGTTTGTACTTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
||
| 3UTR CAA 72 bp | ATGAGCACTCCAGTGGAAGAGTCTTGCAGTGGCATCTaGTTGTATGAAACAGAATGTACTCAGGCTATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: MSTPVEESCSGI*LYETECTQAIG Trigger: GCCAATAGCCTGAGTACATTCTGTTTCATACAACAAGATGCCACTGCAAGACTCTTCCACTGGAGTGCTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
||
| CDS-3UTR TCA 90 bp | GCTTCCAGAAGATTAAATCAGAACAAGTACTTGGACCACTTAAAATGTAGGTATCGTCCTCTACCACCTTaGGGAAACGCTGCGCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ASRRLNQNKYLDHLKCRYRPLPP*GNAARE Trigger: TTCACGCGCAGCGTTTCCTCAAGGTGGTAGAGGACG...ATACCTACATTTTAAGTGGTCCAAGTACTTGTTCTGATTTAATCTTCTGGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR TCA 90 bp | GACTCTTTTGTCTTGGAAGGTGTTCCTCTTCCTTCAGCTGTAATGTGTCAAAATACGACTCTTTTCCCGTaGTCTACTATGGTCCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DSFVLEGVPLPSAVMCQNTTLFP*STMVPF Trigger: GAACGGGACCATAGTAGATCACGGGAAAAGAGTCGT...ATTTTGACACATTACAGCTGAAGGAAGAGGAACACCTTCCAAGACAAAAGAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TTTATCCATGAAGCCTTACAGGTTCAGTTCAATCACAAGAAGCAAACTGCTGGAAGTGTACACAACGTTTaGTGCGGCTCCTTTACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FIHEALQVQFNHKKQTAGSVHNV*CGSFTH Trigger: GTGGGTAAAGGAGCCGCACCAAACGTTGTGTACACT...TCCAGCAGTTTGCTTCTTGTGATTGAACTGAACCTGTAAGGCTTCATGGATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCAAGGAAAAAGAACTGGTaGTGGAGGGCGGTCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: YSDLFLFSLSMKPYRFSSRKKNW*WRAVSS Trigger: CGAGGAGACCGCCCTCCACCACCAGTTCTTTTTCCT...TGAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGGCCATATGGGTCTGTTaGTGGTGGACCTCGACTATC | + |
|
Preference number: 4 (lower is better) Translates to: ALFRSIPVQFIHEALQVQAIWVC*WWTSTI Trigger: GATAGTCGAGGTCCACCACCAACAGACCCATATGGC...CTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | AAGACTCTTTTGTCTTGGAAGGTGTTCCTCTTCCTTCAGCTGTTTTCAGATGCTCTACTCCGAGATTTATaGCGACGACTCTTTTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KTLLSWKVFLFLQLFSDALLRDL*RRLFSR Trigger: ACGGGAAAAGAGTCGTCGCCATAAATCTCGGAGTAG...AGCATCTGAAAACAGCTGAAGGAAGAGGAACACCTTCCAAGACAAAAGAGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176480.8 |
||
| CDS-3UTR CCA 90 bp | TATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCAATTTCCTGGAAAAGGTaGAGGTGGCCCTCCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YSDLFLFSLSMKPYRFSSISWKR*RWPSWS Trigger: GGACCAGGAGGGCCACCTCCACCTTTTCCAGGAAAT...TGAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176670.8 |
||
| CDS-3UTR TCA 90 bp | GCTTTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGCCCAGACATCTGTCCTaGCTGTGTAGTTTTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ALFRSIPVQFIHEALQVQPRHLS*LCSFPG Trigger: TCCAGGAAAACTACACAGTCAGGACAGATGTCTGGG...CTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR TCA 90 bp | CTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCAATCACAAGAAGCAAATTGGACTCGATTCCATaGAGGCAATCCTGCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LFSLSMKPYRFSSITRSKLDSIP*RQSCRE Trigger: CTCTCTGCAGGATTGCCTTCATGGAATCGAGTCCAA...TTTGCTTCTTGTGATTGAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR TCA 90 bp | TTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCATGGTCCCGTTCTCTTaGTCGTTCACGTCTGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LFRSIPVQFIHEALQVQFMVPFS*SFTSGS Trigger: GGATCCAGACGTGAACGATCAAGAGAACGGGACCAT...GAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 |
||
| CDS-3UTR GCA 90 bp | GCTTTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGGTACACAACGTTTGGTaGGGCTCCTTTACCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: ALFRSIPVQFIHEALQVQVHNVW*GSFTHI Trigger: GATGTGGGTAAAGGAGCCGCACCAAACGTTGTGTAC...CTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR GCA 90 bp | AGAAAAGTACAAACCTCTCAAGCTGCTCATTACCTCAACCTATGGCACAGACCTTCAGGAACTGCTTATTaGATGGAGTTACAACAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RKVQTSQAAHYLNLWHRPSGTAY*MELQQD Trigger: GTCCTGTTGTAACTCCATGCAATAAGCAGTTCCTGA...AGGTCTGTGCCATAGGTTGAGGTAATGAGCAGCTTGAGAGGTTTGTACTTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
||
| CDS-3UTR GCA 90 bp | CACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTTTTTGCAACGATCATCTaGAGAGACTTTGGATTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HKKQTAGQASLFPREDSFFATII*RDFGLF Trigger: AAACAATCCAAAGTCTCTGCAGATGATCGTTGCAAA...AAAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTG 43% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000069168.13 ENSMUST00000176480.8 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR GCA 90 bp | TTTATCCATGAAGCCTTACAGGTTCAGTTCAATCACAAGAAGCAAACTGCTGGAATGCTGTGCCCCATATaGCATGGAATCCTAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FIHEALQVQFNHKKQTAGMLCPI*HGILVS Trigger: GGAAACTAGGATTCCATGGCATATGGGGCACAGCAT...TCCAGCAGTTTGCTTCTTGTGATTGAACTGAACCTGTAAGGCTTCATGGATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176670.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGTACAAACCTCTCAAGCTGCTCATTACCTCAACCTATGGCACAGACCTGAACTGCTTATTGCATaGAGTTACAACAGGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RKVQTSQAAHYLNLWHRPELLIA*SYNRTL Trigger: CAGAGTCCTGTTGTAACTCCATGCAATAAGCAGTTC...AGGTCTGTGCCATAGGTTGAGGTAATGAGCAGCTTGAGAGGTTTGTACTTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
||
| CDS-3UTR CCA 90 bp | TTCTTTGGCCTTCTGGTATCAGACAACTTATTTACAAAGGGTGATCATTCAATATGGAGTTTGTCCAGCTaGAAAAGGTGGAGGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FFGLLVSDNLFTKGDHSIWSLSS*KRWRWP Trigger: GGGCCACCTCCACCTTTTCCAGCTGGACAAACTCCA...TATTGAATGATCACCCTTTGTAAATAAGTTGTCTGATACCAGAAGGCCAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
||
| CDS-3UTR CCA 90 bp | ACAGTTTATTACAACACTACATCTAGTGTAATCAAATCGGTGCTGTTTACAGACTGGAGTTTGTCCAGCTaGAAAAGGTGGAGGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TVYYNTTSSVIKSVLFTDWSLSS*KRWRWP Trigger: GGGCCACCTCCACCTTTTCCAGCTGGACAAACTCCA...GTCTGTAAACAGCACCGATTTGATTACACTAGATGTAGTGTTGTAATAAACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069168.13 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TGTGATTACAAGAATCCCAATTTCCAGATTTTAGAAGTACACAATGAGTCCTCTTGGAGTTTGTCCAGCTaGAAAAGGTGGAGGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CDYKNPNFQILEVHNESSWSLSS*KRWRWP Trigger: GGGCCACCTCCACCTTTTCCAGCTGGACAAACTCCA...AGAGGACTCATTGTGTACTTCTAAAATCTGGAAATTGGGATTCTTGTAATCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR CCA 90 bp | TTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCAAAAAGAACTGGTGGTaGAGGGCGGTCTCCTCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LFRSIPVQFIHEALQVQFKKNWW*RAVSSV Trigger: AACCGAGGAGACCGCCCTCCACCACCAGTTCTTTTT...GAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TGTGATTACAAGAATCCCAATTTCCAGATTTTAGAAGTACACAATGAGTCCTCTAGGAAAAAGAACTGGTaGTGGAGGGCGGTCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: CDYKNPNFQILEVHNESSRKKNW*WRAVSS Trigger: CGAGGAGACCGCCCTCCACCACCAGTTCTTTTTCCT...AGAGGACTCATTGTGTACTTCTAAAATCTGGAAATTGGGATTCTTGTAATCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR CCA 90 bp | ACAGTTTATTACAACACTACATCTAGTGTAATCAAATCGGTGCTGTTTACAGACTCCAGGAAAAAGAACTaGTGGTGGAGGGCGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVYYNTTSSVIKSVLFTDSRKKN*WWRAVS Trigger: GGAGACCGCCCTCCACCACCAGTTCTTTTTCCTGGA...GTCTGTAAACAGCACCGATTTGATTACACTAGATGTAGTGTTGTAATAAACTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCCAGAAGATTAAATCAGAACAAGTACTTGGACCACTTAAAATGTAGGTATTCCAGGAAAAAGAACTaGTGGTGGAGGGCGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ASRRLNQNKYLDHLKCRYSRKKN*WWRAVS Trigger: GGAGACCGCCCTCCACCACCAGTTCTTTTTCCTGGA...ATACCTACATTTTAAGTGGTCCAAGTACTTGTTCTGATTTAATCTTCTGGAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR CCA 90 bp | TGTGATTACAAGAATCCCAATTTCCAGATTTTAGAAGTACACAATGAGTCCTCTTGGTCCCGGAAGATGTaGAGGAGGAGCAAGTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CDYKNPNFQILEVHNESSWSRKM*RRSKCE Trigger: CTCACACTTGCTCCTCCTCCACATCTTCCGGGACCA...AGAGGACTCATTGTGTACTTCTAAAATCTGGAAATTGGGATTCTTGTAATCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR CCA 90 bp | TTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCGCCATATGGGTCTGTTaGTGGTGGACCTCGACTATC | + |
|
Preference number: 4 (lower is better) Translates to: LFRSIPVQFIHEALQVQFAIWVC*WWTSTI Trigger: GATAGTCGAGGTCCACCACCAACAGACCCATATGGC...GAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCAGCCATATGGGTCTGTTaGTGGTGGACCTCGACTATC | + |
|
Preference number: 4 (lower is better) Translates to: YSDLFLFSLSMKPYRFSSAIWVC*WWTSTI Trigger: GATAGTCGAGGTCCACCACCAACAGACCCATATGGC...TGAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | ACAGTTTATTACAACACTACATCTAGTGTAATCAAATCGGTGCTGTTTACAGACGTCACCCCTATCATATaGGGGAGGTCGGCCATATGG | + |
|
Preference number: 4 (lower is better) Translates to: TVYYNTTSSVIKSVLFTDVTPII*GRSAIW Trigger: CCATATGGCCGACCTCCCCCATATGATAGGGGTGAC...GTCTGTAAACAGCACCGATTTGATTACACTAGATGTAGTGTTGTAATAAACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TGTGATTACAAGAATCCCAATTTCCAGATTTTAGAAGTACACAATGAGTCCTCTGTCACCCCTATCATATaGGGGAGGTCGGCCATATGG | + |
|
Preference number: 4 (lower is better) Translates to: CDYKNPNFQILEVHNESSVTPII*GRSAIW Trigger: CCATATGGCCGACCTCCCCCATATGATAGGGGTGAC...AGAGGACTCATTGTGTACTTCTAAAATCTGGAAATTGGGATTCTTGTAATCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGCAGACCCATAGGACTTaGACTCGATTCCATGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALFRSIPVQFIHEALQVQQTHRT*TRFHEG Trigger: GCCTTCATGGAATCGAGTCCAAGTCCTATGGGTCTG...CTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCAATCACAAGAAGCAAACAGACCCATAGGACTTaGACTCGATTCCATGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LFSLSMKPYRFSSITRSKQTHRT*TRFHEG Trigger: GCCTTCATGGAATCGAGTCCAAGTCCTATGGGTCTG...TTTGCTTCTTGTGATTGAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TTTATCCATGAAGCCTTACAGGTTCAGTTCAATCACAAGAAGCAAACTGCTGGACTACTCCGAGATTTATaGCGACGACTCTTTTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: FIHEALQVQFNHKKQTAGLLRDL*RRLFSR Trigger: ACGGGAAAAGAGTCGTCGCCATAAATCTCGGAGTAG...TCCAGCAGTTTGCTTCTTGTGATTGAACTGAACCTGTAAGGCTTCATGGATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR TCA 90 bp | TTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCCCCAGACATCTGTCCTaGCTGTGTAGTTTTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LFRSIPVQFIHEALQVQFPRHLS*LCSFPG Trigger: TCCAGGAAAACTACACAGTCAGGACAGATGTCTGGG...GAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR TCA 90 bp | CTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCAATCACAAGAAGCAAATGGACCTCGACTATCTaGTGTTGGCATGCCACTATT | + |
|
Preference number: 4 (lower is better) Translates to: LFSLSMKPYRFSSITRSKWTSTI*CWHATI Trigger: AATAGTGGCATGCCAACATCAGATAGTCGAGGTCCA...TTTGCTTCTTGTGATTGAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR TCA 90 bp | TTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCTTGGACTCGATTCCATaGAGGCAATCCTGCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LFRSIPVQFIHEALQVQFLDSIP*RQSCRE Trigger: CTCTCTGCAGGATTGCCTTCATGGAATCGAGTCCAA...GAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR TCA 90 bp | ACAGTTTATTACAACACTACATCTAGTGTAATCAAATCGGTGCTGTTTACAGACATGGTCCCGTTCTCTTaGTCGTTCACGTCTGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: TVYYNTTSSVIKSVLFTDMVPFS*SFTSGS Trigger: GGATCCAGACGTGAACGATCAAGAGAACGGGACCAT...GTCTGTAAACAGCACCGATTTGATTACACTAGATGTAGTGTTGTAATAAACTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCCAGAAGATTAAATCAGAACAAGTACTTGGACCACTTAAAATGTAGGTATATGGTCCCGTTCTCTTaGTCGTTCACGTCTGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: ASRRLNQNKYLDHLKCRYMVPFS*SFTSGS Trigger: GGATCCAGACGTGAACGATCAAGAGAACGGGACCAT...ATACCTACATTTTAAGTGGTCCAAGTACTTGTTCTGATTTAATCTTCTGGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR TCA 90 bp | TTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCACGACTCTTTTCCCGTaGTCTACTATGGTCCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LFRSIPVQFIHEALQVQFTTLFP*STMVPF Trigger: GAACGGGACCATAGTAGATCACGGGAAAAGAGTCGT...GAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR GCA 90 bp | TTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCGTACACAACGTTTGGTaGGGCTCCTTTACCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: LFRSIPVQFIHEALQVQFVHNVW*GSFTHI Trigger: GATGTGGGTAAAGGAGCCGCACCAAACGTTGTGTAC...GAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR GCA 90 bp | TTTATCCATGAAGCCTTACAGGTTCAGTTCAATCACAAGAAGCAAACTGCTGGAATTTCCTCTATGCTGTaGCCCATATGCCATGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: FIHEALQVQFNHKKQTAGISSML*PICHGI Trigger: GATTCCATGGCATATGGGGCACAGCATAGAGGAAAT...TCCAGCAGTTTGCTTCTTGTGATTGAACTGAACCTGTAAGGCTTCATGGATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176670.8 |
||
| CDS-3UTR CCA 90 bp | TATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCAGTAGTCGCGATCTTCTaGGGCATCGCCATTATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: YSDLFLFSLSMKPYRFSSVVAIF*GIAIIC Trigger: GCAAATAATGGCGATGCCCCAGAAGATCGCGACTAC...TGAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TCACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTGATCCATTAACTTTTTaGAAGATGCTTCAGATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SQEANCWTSVTFPPRRLFDPLTF*KMLQIQ Trigger: TTGGATCTGAAGCATCTTCCAAAAAGTTAATGGATC...AAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | CACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTTGATCCATTAACTTTTTaGAAGATGCTTCAGATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HKKQTAGQASLFPREDSFDPLTF*KMLQIQ Trigger: TTGGATCTGAAGCATCTTCCAAAAAGTTAATGGATC...AAAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TGTGATTACAAGAATCCCAATTTCCAGATTTTAGAAGTACACAATGAGTCCTCTAAAAAGAACTGGTGGTaGAGGGCGGTCTCCTCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CDYKNPNFQILEVHNESSKKNWW*RAVSSV Trigger: AACCGAGGAGACCGCCCTCCACCACCAGTTCTTTTT...AGAGGACTCATTGTGTACTTCTAAAATCTGGAAATTGGGATTCTTGTAATCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCCAGAAGATTAAATCAGAACAAGTACTTGGACCACTTAAAATGTAGGTATGCCATATGGGTCTGTTaGTGGTGGACCTCGACTATC | + |
|
Preference number: 4 (lower is better) Translates to: ASRRLNQNKYLDHLKCRYAIWVC*WWTSTI Trigger: GATAGTCGAGGTCCACCACCAACAGACCCATATGGC...ATACCTACATTTTAAGTGGTCCAAGTACTTGTTCTGATTTAATCTTCTGGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176480.8 ENSMUST00000177145.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCAATCACAAGAAGCAAATCCCGTGATCTACTATaGTCCCGTTCTCTTGATCGT | + |
|
Preference number: 4 (lower is better) Translates to: LFSLSMKPYRFSSITRSKSRDLL*SRSLDR Trigger: ACGATCAAGAGAACGGGACCATAGTAGATCACGGGA...TTTGCTTCTTGTGATTGAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| 3UTR CAA 72 bp | ATATTGAATTCAAAGTGCCACGTCAGGAGAAATACCTaGTGGAATCTCACTACTAGCTGCAAGGAATGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ILNSKCHVRRNT*WNLTTSCKECD Trigger: GTCACATTCCTTGCAGCTAGTAGTGAGATTCCACAAGGTATTTCTCCTGACGTGGCACTTTGAATTCAATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
||
| CDS-3UTR TCA 90 bp | GCTTCCAGAAGATTAAATCAGAACAAGTACTTGGACCACTTAAAATGTAGGTATCCCAGACATCTGTCCTaGCTGTGTAGTTTTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASRRLNQNKYLDHLKCRYPRHLS*LCSFPG Trigger: TCCAGGAAAACTACACAGTCAGGACAGATGTCTGGG...ATACCTACATTTTAAGTGGTCCAAGTACTTGTTCTGATTTAATCTTCTGGAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR TCA 90 bp | TCAGATGCTTCCAGAAGATTAAATCAGAACAAGTACTTGGACCACTTAAAATGTTTGGACTCGATTCCATaGAGGCAATCCTGCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SDASRRLNQNKYLDHLKCLDSIP*RQSCRE Trigger: CTCTCTGCAGGATTGCCTTCATGGAATCGAGTCCAA...ACATTTTAAGTGGTCCAAGTACTTGTTCTGATTTAATCTTCTGGAAGCATCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176480.8 ENSMUST00000177145.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTTGGCCTTCTGGTATCAGACAACTTATTTACAAAGGGTGATCATTCAATAACGACTCTTTTCCCGTaGTCTACTATGGTCCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FFGLLVSDNLFTKGDHSITTLFP*STMVPF Trigger: GAACGGGACCATAGTAGATCACGGGAAAAGAGTCGT...TATTGAATGATCACCCTTTGTAAATAAGTTGTCTGATACCAGAAGGCCAAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
||
| CDS-3UTR TCA 90 bp | TGTGATTACAAGAATCCCAATTTCCAGATTTTAGAAGTACACAATGAGTCCTCTACGACTCTTTTCCCGTaGTCTACTATGGTCCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CDYKNPNFQILEVHNESSTTLFP*STMVPF Trigger: GAACGGGACCATAGTAGATCACGGGAAAAGAGTCGT...AGAGGACTCATTGTGTACTTCTAAAATCTGGAAATTGGGATTCTTGTAATCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR TCA 90 bp | ACAGTTTATTACAACACTACATCTAGTGTAATCAAATCGGTGCTGTTTACAGACATGGTCCCGTTCTCTTaGTCGTTCACGTCTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TVYYNTTSSVIKSVLFTDMVPFS*SFTSSG Trigger: TCCAGAAGACGTGAACGATCAAGAGAACGGGACCAT...GTCTGTAAACAGCACCGATTTGATTACACTAGATGTAGTGTTGTAATAAACTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176686.8 |
||
| CDS-3UTR GCA 90 bp | GCTTTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGGGCATCGCCATTATTTaGAGATGGAGAGATGACATC | + |
|
Preference number: 4 (lower is better) Translates to: ALFRSIPVQFIHEALQVQGIAII*RWRDDI Trigger: GATGTCATCTCTCCATCTGCAAATAATGGCGATGCC...CTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR GCA 90 bp | TCAGATGCTTCCAGAAGATTAAATCAGAACAAGTACTTGGACCACTTAAAATGTGTACACAACGTTTGGTaGGGCTCCTTTACCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: SDASRRLNQNKYLDHLKCVHNVW*GSFTHI Trigger: GATGTGGGTAAAGGAGCCGCACCAAACGTTGTGTAC...ACATTTTAAGTGGTCCAAGTACTTGTTCTGATTTAATCTTCTGGAAGCATCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR GCA 90 bp | TTTATCCATGAAGCCTTACAGGTTCAGTTCAATCACAAGAAGCAAACTGCTGGATCAGGAACTGCTTATTaGATGGAGTTACAACAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FIHEALQVQFNHKKQTAGSGTAY*MELQQD Trigger: GTCCTGTTGTAACTCCATGCAATAAGCAGTTCCTGA...TCCAGCAGTTTGCTTCTTGTGATTGAACTGAACCTGTAAGGCTTCATGGATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR GCA 90 bp | CGAGAAGACTCTTTTGTCTTGGAAGGTGTTCCTCTTCCTTCAGCTGTTTTCAGATTTGCAACGATCATCTaGAGAGACTTTGGATTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: REDSFVLEGVPLPSAVFRFATII*RDFGLF Trigger: AAACAATCCAAAGTCTCTGCAGATGATCGTTGCAAA...TCTGAAAACAGCTGAAGGAAGAGGAACACCTTCCAAGACAAAAGAGTCTTCTCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176480.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTTGGCCTTCTGGTATCAGACAACTTATTTACAAAGGGTGATCATTCAATAGTAGTCGCGATCTTCTaGGGCATCGCCATTATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FFGLLVSDNLFTKGDHSIVVAIF*GIAIIC Trigger: GCAAATAATGGCGATGCCCCAGAAGATCGCGACTAC...TATTGAATGATCACCCTTTGTAAATAAGTTGTCTGATACCAGAAGGCCAAAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
||
| CDS-3UTR CCA 90 bp | GCTTCCAGAAGATTAAATCAGAACAAGTACTTGGACCACTTAAAATGTAGGTATGTAGTCGCGATCTTCTaGGGCATCGCCATTATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASRRLNQNKYLDHLKCRYVVAIF*GIAIIC Trigger: GCAAATAATGGCGATGCCCCAGAAGATCGCGACTAC...ATACCTACATTTTAAGTGGTCCAAGTACTTGTTCTGATTTAATCTTCTGGAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR CCA 90 bp | TGTGATTACAAGAATCCCAATTTCCAGATTTTAGAAGTACACAATGAGTCCTCTCAGACCCATAGGACTTaGACTCGATTCCATGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CDYKNPNFQILEVHNESSQTHRT*TRFHEG Trigger: GCCTTCATGGAATCGAGTCCAAGTCCTATGGGTCTG...AGAGGACTCATTGTGTACTTCTAAAATCTGGAAATTGGGATTCTTGTAATCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR CCA 90 bp | TATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCATCCCGTGATCTACTATaGTCCCGTTCTCTTGATCGT | + |
|
Preference number: 4 (lower is better) Translates to: YSDLFLFSLSMKPYRFSSSRDLL*SRSLDR Trigger: ACGATCAAGAGAACGGGACCATAGTAGATCACGGGA...TGAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR TCA 90 bp | TCAGATGCTTCCAGAAGATTAAATCAGAACAAGTACTTGGACCACTTAAAATGTTGGACCTCGACTATCTaGTGTTGGCATGCCACTATT | + |
|
Preference number: 4 (lower is better) Translates to: SDASRRLNQNKYLDHLKCWTSTI*CWHATI Trigger: AATAGTGGCATGCCAACATCAGATAGTCGAGGTCCA...ACATTTTAAGTGGTCCAAGTACTTGTTCTGATTTAATCTTCTGGAAGCATCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR GCA 90 bp | GCTTTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGATGTCCACCATATTCTaGTTCCTGGTTGAACTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALFRSIPVQFIHEALQVQMSTIF*FLVELF Trigger: GAAGAGTTCAACCAGGAAGCAGAATATGGTGGACAT...CTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR GCA 90 bp | GCTTTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTCAGGAACTGCTTATTaGATGGAGTTACAACAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ALFRSIPVQFIHEALQVQSGTAY*MELQQD Trigger: GTCCTGTTGTAACTCCATGCAATAAGCAGTTCCTGA...CTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCCAGAAGATTAAATCAGAACAAGTACTTGGACCACTTAAAATGTAGGTATTCCCGTGATCTACTATaGTCCCGTTCTCTTGATCGT | + |
|
Preference number: 4 (lower is better) Translates to: ASRRLNQNKYLDHLKCRYSRDLL*SRSLDR Trigger: ACGATCAAGAGAACGGGACCATAGTAGATCACGGGA...ATACCTACATTTTAAGTGGTCCAAGTACTTGTTCTGATTTAATCTTCTGGAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176480.8 ENSMUST00000177145.8 |
||
| CDS-3UTR CCA 90 bp | TGTGATTACAAGAATCCCAATTTCCAGATTTTAGAAGTACACAATGAGTCCTCTTCCCGTGATCTACTATaGTCCCGTTCTCTTGATCGT | + |
|
Preference number: 4 (lower is better) Translates to: CDYKNPNFQILEVHNESSSRDLL*SRSLDR Trigger: ACGATCAAGAGAACGGGACCATAGTAGATCACGGGA...AGAGGACTCATTGTGTACTTCTAAAATCTGGAAATTGGGATTCTTGTAATCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCCAGAAGATTAAATCAGAACAAGTACTTGGACCACTTAAAATGTAGGTATCTACTCCGAGATTTATaGCGACGACTCTTTTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: ASRRLNQNKYLDHLKCRYLLRDL*RRLFSR Trigger: ACGGGAAAAGAGTCGTCGCCATAAATCTCGGAGTAG...ATACCTACATTTTAAGTGGTCCAAGTACTTGTTCTGATTTAATCTTCTGGAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176480.8 ENSMUST00000177145.8 |
||
| 3UTR CAA 72 bp | GAATCAAGTACAATACTAGAGCTTTCTTTACGCATCTaGCTGTATAGCCATAATTACACTGCCTATGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: ESSTILELSLRI*LYSHNYTAYGT Trigger: GGTGCCATAGGCAGTGTAATTATGGCTATACAGCAAGATGCGTAAAGAAAGCTCTAGTATTGTACTTGATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
||
| 3UTR CAA 72 bp | GCATCTTGTTGTATGAAACAGAATGTACTCAGGCTATaGGCACGTGTCAACACAGGGAAAGATAAAGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: ASCCMKQNVLRL*ARVNTGKDKVL Trigger: TAAGACTTTATCTTTCCCTGTGTTGACACGTGCCAATAGCCTGAGTACATTCTGTTTCATACAACAAGATGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
||
| CDS-3UTR GCA 90 bp | GACTCTTTTGTCTTGGAAGGTGTTCCTCTTCCTTCAGCTGTAATGTGTCAAAATTTTGCAACGATCATCTaGAGAGACTTTGGATTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: DSFVLEGVPLPSAVMCQNFATII*RDFGLF Trigger: AAACAATCCAAAGTCTCTGCAGATGATCGTTGCAAA...ATTTTGACACATTACAGCTGAAGGAAGAGGAACACCTTCCAAGACAAAAGAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176686.8 |
||
| CDS-3UTR GCA 90 bp | TCAGATGCTTCCAGAAGATTAAATCAGAACAAGTACTTGGACCACTTAAAATGTATGTCCACCATATTCTaGTTCCTGGTTGAACTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SDASRRLNQNKYLDHLKCMSTIF*FLVELF Trigger: GAAGAGTTCAACCAGGAAGCAGAATATGGTGGACAT...ACATTTTAAGTGGTCCAAGTACTTGTTCTGATTTAATCTTCTGGAAGCATCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR GCA 90 bp | TCAGATGCTTCCAGAAGATTAAATCAGAACAAGTACTTGGACCACTTAAAATGTTCAGGAACTGCTTATTaGATGGAGTTACAACAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SDASRRLNQNKYLDHLKCSGTAY*MELQQD Trigger: GTCCTGTTGTAACTCCATGCAATAAGCAGTTCCTGA...ACATTTTAAGTGGTCCAAGTACTTGTTCTGATTTAATCTTCTGGAAGCATCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR CCA 90 bp | AGACTCTTTTGTCTTGGAAGGTGTTCCTCTTCCTTCAGCTGTAATGTGTCAAAAGATCCATTAACTTTTTaGAAGATGCTTCAGATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RLFCLGRCSSSFSCNVSKDPLTF*KMLQIQ Trigger: TTGGATCTGAAGCATCTTCCAAAAAGTTAATGGATC...TTTTGACACATTACAGCTGAAGGAAGAGGAACACCTTCCAAGACAAAAGAGTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCCAGAAGATTAAATCAGAACAAGTACTTGGACCACTTAAAATGTAGGTATGAACTGCTTATTGCATaGAGTTACAACAGGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASRRLNQNKYLDHLKCRYELLIA*SYNRTL Trigger: CAGAGTCCTGTTGTAACTCCATGCAATAAGCAGTTC...ATACCTACATTTTAAGTGGTCCAAGTACTTGTTCTGATTTAATCTTCTGGAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| 3UTR CAA 72 bp | TCTACAAATCTATTTCCTTTCCCTCAAAGCAGTATATaGAATTCAAAGTGCCACGTCAGGAGAAATACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: STNLFPFPQSSI*NSKCHVRRNTL Trigger: CAAGGTATTTCTCCTGACGTGGCACTTTGAATTCAATATACTGCTTTGAGGGAAAGGAAATAGATTTGTAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
||
| CDS-3UTR GCA 90 bp | TATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCATTTGCAACGATCATCTaGAGAGACTTTGGATTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: YSDLFLFSLSMKPYRFSSFATII*RDFGLF Trigger: AAACAATCCAAAGTCTCTGCAGATGATCGTTGCAAA...TGAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CCA 90 bp | TATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCACTTTTAGGCCAAAAATaGGTATTTCCTCTATGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YSDLFLFSLSMKPYRFSSLLGQK*VFPLCC Trigger: ACAGCATAGAGGAAATACCCATTTTTGGCCTAAAAG...TGAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176670.8 |
||
| CDS-3UTR GCA 90 bp | TCAGATGCTTCCAGAAGATTAAATCAGAACAAGTACTTGGACCACTTAAAATGTTTTGCAACGATCATCTaGAGAGACTTTGGATTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SDASRRLNQNKYLDHLKCFATII*RDFGLF Trigger: AAACAATCCAAAGTCTCTGCAGATGATCGTTGCAAA...ACATTTTAAGTGGTCCAAGTACTTGTTCTGATTTAATCTTCTGGAAGCATCTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176480.8 ENSMUST00000177145.8 |
||
| CDS-3UTR CCA 90 bp | TGTGATTACAAGAATCCCAATTTCCAGATTTTAGAAGTACACAATGAGTCCTCTGATCCATTAACTTTTTaGAAGATGCTTCAGATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CDYKNPNFQILEVHNESSDPLTF*KMLQIQ Trigger: TTGGATCTGAAGCATCTTCCAAAAAGTTAATGGATC...AGAGGACTCATTGTGTACTTCTAAAATCTGGAAATTGGGATTCTTGTAATCACA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS TCA 90 bp | CGGTCTCCTCGGTTAGGAGGTCCTGCTAGAGGAGGTGGCAGAACCTaGCCAGGAGGTGGAGGACCTGGTGGACCAGGTGGGCCAGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RSPRLGGPARGGGRT*PGGGGPGGPGGPGG Trigger: CCCACCTGGCCCACCTGGTCCACCAGGTCCTCCACCTCCTGGTCAGGTTCTGCCACCTCCTCTAGCAGGACCTCCTAACCGAGGAGACCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 ENSMUST00000177145.8 |
||
| CDS TCA 90 bp | TGGAAACCGGCCCCGTCCTCTACCACCTTGAGGAAACGCTGCGCGTaGACCGCCTCCTGGAGGACCGGCTTTCCCTTCCCCAGACATCTG | + |
|
Preference number: 5 (lower is better) Translates to: WKPAPSSTTLRKRCA*TASWRTGFPFPRHL Trigger: CAGATGTCTGGGGAAGGGAAAGCCGGTCCTCCAGGAGGCGGTTCACGCGCAGCGTTTCCTCAAGGTGGTAGAGGACGGGGCCGGTTTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 ENSMUST00000177145.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCCCCGAGAAGACTCTTTTGTCTTGGAAGGTGTTCCTCTTCCTTCAGCTGTGGCCATATGGGTCTGTaGGTGGTGGACCTCGACTAT | + |
|
Preference number: 5 (lower is better) Translates to: FPPRRLFCLGRCSSSFSCGHMGL*VVDLDY Trigger: ATAGTCGAGGTCCACCACCAACAGACCCATATGGCC...ACAGCTGAAGGAAGAGGAACACCTTCCAAGACAAAAGAGTCTTCTCGGGGGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000176480.8 ENSMUST00000176686.8 |
||
| CDS CCA 90 bp | CTACTCCGAGATTTATGGCGACGACTCTTTTCCCGTGATCTACTATaGTCCCGTTCTCTTGATCGTTCACGTCTTCTGGATCCAGACCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLRDLWRRLFSRDLL*SRSLDRSRLLDPDP Trigger: TGGGTCTGGATCCAGAAGACGTGAACGATCAAGAGAACGGGACCATAGTAGATCACGGGAAAAGAGTCGTCGCCATAAATCTCGGAGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176480.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CAA 90 bp | AGAAAAGTACAAACCTCTCAAGCTGCTCATTACCTCAACCTATGGCACAGACCTTGGACGTGGTGGAGTTaGTCCAGCTGGAAAAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RKVQTSQAAHYLNLWHRPWTWWS*SSWKRW Trigger: CCACCTTTTCCAGCTGGACAAACTCCACCACGTCCA...AGGTCTGTGCCATAGGTTGAGGTAATGAGCAGCTTGAGAGGTTTGTACTTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
||
| CDS-3UTR CAA 90 bp | AGAAAAGTACAAACCTCTCAAGCTGCTCATTACCTCAACCTATGGCACAGACCTGGCCATATGGGTCTGTaGGTGGTGGACCTCGACTAT | + |
|
Preference number: 5 (lower is better) Translates to: RKVQTSQAAHYLNLWHRPGHMGL*VVDLDY Trigger: ATAGTCGAGGTCCACCACCAACAGACCCATATGGCC...AGGTCTGTGCCATAGGTTGAGGTAATGAGCAGCTTGAGAGGTTTGTACTTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069168.13 |
||
| CDS-3UTR CAA 90 bp | TTTCCCCCGAGAAGACTCTTTTGTCTTGGAAGGTGTTCCTCTTCCTTCAGCTGTCACTCAGAGGTGTTCTaGCAGTATCCATTTCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FPPRRLFCLGRCSSSFSCHSEVF*QYPFPS Trigger: GGAGGGAAATGGATACTGCAAGAACACCTCTGAGTG...ACAGCTGAAGGAAGAGGAACACCTTCCAAGACAAAAGAGTCTTCTCGGGGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000176480.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CAA 90 bp | TCACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTTATGGTCCCGTTCTCTaGATCGTTCACGTCTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: SQEANCWTSVTFPPRRLFYGPVL*IVHVWI Trigger: GATCCAGACGTGAACGATCAAGAGAACGGGACCATA...AAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 |
||
| CDS-3UTR CAA 90 bp | TCACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTTATGGTCCCGTTCTCTaGATCGTTCACGTCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SQEANCWTSVTFPPRRLFYGPVL*IVHVFW Trigger: CCAGAAGACGTGAACGATCAAGAGAACGGGACCATA...AAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000176480.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCCCCGAGAAGACTCTTTTGTCTTGGAAGGTGTTCCTCTTCCTTCAGCTGTTATTCTGCTTCCTGGTaGAACTCTTCACCCACATCC | + |
|
Preference number: 5 (lower is better) Translates to: FPPRRLFCLGRCSSSFSCYSASW*NSSPTS Trigger: GGATGTGGGTGAAGAGTTCAACCAGGAAGCAGAATA...ACAGCTGAAGGAAGAGGAACACCTTCCAAGACAAAAGAGTCTTCTCGGGGGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176686.8 |
||
| CDS-3UTR CAA 90 bp | TATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCAGGCCATATGGGTCTGTaGGTGGTGGACCTCGACTAT | + |
|
Preference number: 5 (lower is better) Translates to: YSDLFLFSLSMKPYRFSSGHMGL*VVDLDY Trigger: ATAGTCGAGGTCCACCACCAACAGACCCATATGGCC...TGAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CAA 90 bp | TTTATCCATGAAGCCTTACAGGTTCAGTTCAATCACAAGAAGCAAACTGCTGGACAAGGGCAAATCCCTTaGATTGTCCATTTGCCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: FIHEALQVQFNHKKQTAGQGQIP*IVHLPD Trigger: ATCGGGCAAATGGACAATCAAAGGGATTTGCCCTTG...TCCAGCAGTTTGCTTCTTGTGATTGAACTGAACCTGTAAGGCTTCATGGATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CAA 90 bp | CACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTTGGATTGCATTTCAAATaGACTCAGGAACTGCTTATT | + |
|
Preference number: 5 (lower is better) Translates to: HKKQTAGQASLFPREDSFGLHFK*TQELLI Trigger: AATAAGCAGTTCCTGAGTCAATTTGAAATGCAATCC...AAAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CAA 90 bp | TCACAAGAAGCAAACTGCTGGACAAGCGTCACTTTTCCCCCGAGAAGACTCTTTGGATTGCATTTCAAATaGACTCAGGAACTGCTTATT | + |
|
Preference number: 5 (lower is better) Translates to: SQEANCWTSVTFPPRRLFGLHFK*TQELLI Trigger: AATAAGCAGTTCCTGAGTCAATTTGAAATGCAATCC...AAAGAGTCTTCTCGGGGGAAAAGTGACGCTTGTCCAGCAGTTTGCTTCTTGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCCCCGAGAAGACTCTTTTGTCTTGGAAGGTGTTCCTCTTCCTTCAGCTGTGGATTGCATTTCAAATaGACTCAGGAACTGCTTATT | + |
|
Preference number: 5 (lower is better) Translates to: FPPRRLFCLGRCSSSFSCGLHFK*TQELLI Trigger: AATAAGCAGTTCCTGAGTCAATTTGAAATGCAATCC...ACAGCTGAAGGAAGAGGAACACCTTCCAAGACAAAAGAGTCTTCTCGGGGGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176686.8 |
||
| CDS-3UTR CAA 90 bp | ACAGTTTATTACAACACTACATCTAGTGTAATCAAATCGGTGCTGTTTACAGACTGGACGTGGTGGAGTTaGTCCAGCTGGAAAAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TVYYNTTSSVIKSVLFTDWTWWS*SSWKRW Trigger: CCACCTTTTCCAGCTGGACAAACTCCACCACGTCCA...GTCTGTAAACAGCACCGATTTGATTACACTAGATGTAGTGTTGTAATAAACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069168.13 ENSMUST00000176686.8 |
||
| CDS-3UTR CAA 90 bp | TGTGATTACAAGAATCCCAATTTCCAGATTTTAGAAGTACACAATGAGTCCTCTTGGACGTGGTGGAGTTaGTCCAGCTGGAAAAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CDYKNPNFQILEVHNESSWTWWS*SSWKRW Trigger: CCACCTTTTCCAGCTGGACAAACTCCACCACGTCCA...AGAGGACTCATTGTGTACTTCTAAAATCTGGAAATTGGGATTCTTGTAATCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR CAA 90 bp | CTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCAATCACAAGAAGCAAAAGGCTGCCCAAAAGGTaGTCCAGGAAAAAGAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: LFSLSMKPYRFSSITRSKRLPKR*SRKKNW Trigger: CCAGTTCTTTTTCCTGGACAACCTTTTGGGCAGCCT...TTTGCTTCTTGTGATTGAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CAA 90 bp | GCTTTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGAGGCTGCCCAAAAGGTaGTCCAGGAAAAAGAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: ALFRSIPVQFIHEALQVQRLPKR*SRKKNW Trigger: CCAGTTCTTTTTCCTGGACAACCTTTTGGGCAGCCT...CTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CAA 90 bp | TCAGATGCTTCCAGAAGATTAAATCAGAACAAGTACTTGGACCACTTAAAATGTGGCCATATGGGTCTGTaGGTGGTGGACCTCGACTAT | + |
|
Preference number: 5 (lower is better) Translates to: SDASRRLNQNKYLDHLKCGHMGL*VVDLDY Trigger: ATAGTCGAGGTCCACCACCAACAGACCCATATGGCC...ACATTTTAAGTGGTCCAAGTACTTGTTCTGATTTAATCTTCTGGAAGCATCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176480.8 ENSMUST00000177145.8 |
||
| CDS-3UTR CAA 90 bp | GCTTTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTATGGTCCCGTTCTCTaGATCGTTCACGTCTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: ALFRSIPVQFIHEALQVQYGPVL*IVHVWI Trigger: GATCCAGACGTGAACGATCAAGAGAACGGGACCATA...CTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 |
||
| CDS-3UTR CAA 90 bp | GCTTTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTATTCTGCTTCCTGGTaGAACTCTTCACCCACATCC | + |
|
Preference number: 5 (lower is better) Translates to: ALFRSIPVQFIHEALQVQYSASW*NSSPTS Trigger: GGATGTGGGTGAAGAGTTCAACCAGGAAGCAGAATA...CTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CAA 90 bp | CTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCAATCACAAGAAGCAAACAAGGGCAAATCCCTTaGATTGTCCATTTGCCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: LFSLSMKPYRFSSITRSKQGQIP*IVHLPD Trigger: ATCGGGCAAATGGACAATCAAAGGGATTTGCCCTTG...TTTGCTTCTTGTGATTGAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CAA 90 bp | TTTATCCATGAAGCCTTACAGGTTCAGTTCAATCACAAGAAGCAAACTGCTGGACTCAGGAACTGCTTATaGCATGGAGTTACAACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: FIHEALQVQFNHKKQTAGLRNCL*HGVTTG Trigger: TCCTGTTGTAACTCCATGCAATAAGCAGTTCCTGAG...TCCAGCAGTTTGCTTCTTGTGATTGAACTGAACCTGTAAGGCTTCATGGATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CAA 90 bp | GACTCTTTTGTCTTGGAAGGTGTTCCTCTTCCTTCAGCTGTAATGTGTCAAAATCTCAGGAACTGCTTATaGCATGGAGTTACAACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: DSFVLEGVPLPSAVMCQNLRNCL*HGVTTG Trigger: TCCTGTTGTAACTCCATGCAATAAGCAGTTCCTGAG...ATTTTGACACATTACAGCTGAAGGAAGAGGAACACCTTCCAAGACAAAAGAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176686.8 |
||
| CDS-3UTR CAA 90 bp | TTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCAGGCTGCCCAAAAGGTaGTCCAGGAAAAAGAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: LFRSIPVQFIHEALQVQFRLPKR*SRKKNW Trigger: CCAGTTCTTTTTCCTGGACAACCTTTTGGGCAGCCT...GAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CAA 90 bp | TATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCACACTCAGAGGTGTTCTaGCAGTATCCATTTCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YSDLFLFSLSMKPYRFSSHSEVF*QYPFPS Trigger: GGAGGGAAATGGATACTGCAAGAACACCTCTGAGTG...TGAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CAA 90 bp | TTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCCACTCAGAGGTGTTCTaGCAGTATCCATTTCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LFRSIPVQFIHEALQVQFHSEVF*QYPFPS Trigger: GGAGGGAAATGGATACTGCAAGAACACCTCTGAGTG...GAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CAA 90 bp | TGTGATTACAAGAATCCCAATTTCCAGATTTTAGAAGTACACAATGAGTCCTCTAGGCTGCCCAAAAGGTaGTCCAGGAAAAAGAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: CDYKNPNFQILEVHNESSRLPKR*SRKKNW Trigger: CCAGTTCTTTTTCCTGGACAACCTTTTGGGCAGCCT...AGAGGACTCATTGTGTACTTCTAAAATCTGGAAATTGGGATTCTTGTAATCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR CAA 90 bp | GCTTCCAGAAGATTAAATCAGAACAAGTACTTGGACCACTTAAAATGTAGGTATCACTCAGAGGTGTTCTaGCAGTATCCATTTCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASRRLNQNKYLDHLKCRYHSEVF*QYPFPS Trigger: GGAGGGAAATGGATACTGCAAGAACACCTCTGAGTG...ATACCTACATTTTAAGTGGTCCAAGTACTTGTTCTGATTTAATCTTCTGGAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176480.8 ENSMUST00000177145.8 |
||
| CDS-3UTR CAA 90 bp | GCTTCCAGAAGATTAAATCAGAACAAGTACTTGGACCACTTAAAATGTAGGTATTATGGTCCCGTTCTCTaGATCGTTCACGTCTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: ASRRLNQNKYLDHLKCRYYGPVL*IVHVWI Trigger: GATCCAGACGTGAACGATCAAGAGAACGGGACCATA...ATACCTACATTTTAAGTGGTCCAAGTACTTGTTCTGATTTAATCTTCTGGAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS CCA 90 bp | TTTCCTGGATTGCATTTCAAATTGACTCAGGAACTGCTTATTGCATaGAGTTACAACAGGACTCTGACCATGAAGTTCTCTTTTAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: FPGLHFKLTQELLIA*SYNRTLTMKFSFRQ Trigger: TTGCCTAAAAGAGAACTTCATGGTCAGAGTCCTGTTGTAACTCCATGCAATAAGCAGTTCCTGAGTCAATTTGAAATGCAATCCAGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 ENSMUST00000177145.8 |
||
| CDS-3UTR CAA 90 bp | TGTGATTACAAGAATCCCAATTTCCAGATTTTAGAAGTACACAATGAGTCCTCTTATTCTGCTTCCTGGTaGAACTCTTCACCCACATCC | + |
|
Preference number: 5 (lower is better) Translates to: CDYKNPNFQILEVHNESSYSASW*NSSPTS Trigger: GGATGTGGGTGAAGAGTTCAACCAGGAAGCAGAATA...AGAGGACTCATTGTGTACTTCTAAAATCTGGAAATTGGGATTCTTGTAATCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR CAA 90 bp | TTATTCAGATCTATTCCTGTTCAGTTTATCCATGAAGCCTTACAGGTTCAGTTCCTCAGGAACTGCTTATaGCATGGAGTTACAACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LFRSIPVQFIHEALQVQFLRNCL*HGVTTG Trigger: TCCTGTTGTAACTCCATGCAATAAGCAGTTCCTGAG...GAACTGAACCTGTAAGGCTTCATGGATAAACTGAACAGGAATAGATCTGAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 |
||
| CDS-3UTR CAA 90 bp | TGTGATTACAAGAATCCCAATTTCCAGATTTTAGAAGTACACAATGAGTCCTCTCTCAGGAACTGCTTATaGCATGGAGTTACAACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CDYKNPNFQILEVHNESSLRNCL*HGVTTG Trigger: TCCTGTTGTAACTCCATGCAATAAGCAGTTCCTGAG...AGAGGACTCATTGTGTACTTCTAAAATCTGGAAATTGGGATTCTTGTAATCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS-3UTR CAA 90 bp | GCTTCCAGAAGATTAAATCAGAACAAGTACTTGGACCACTTAAAATGTAGGTATGGATTGCATTTCAAATaGACTCAGGAACTGCTTATT | + |
|
Preference number: 5 (lower is better) Translates to: ASRRLNQNKYLDHLKCRYGLHFK*TQELLI Trigger: AATAAGCAGTTCCTGAGTCAATTTGAAATGCAATCC...ATACCTACATTTTAAGTGGTCCAAGTACTTGTTCTGATTTAATCTTCTGGAAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177145.8 |
||
| CDS TCA 72 bp | GCCCCGTCCTCTACCACCTTGAGGAAACGCTGCGCGTaGACCGCCTCCTGGAGGACCGGCTTTCCCTTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: APSSTTLRKRCA*TASWRTGFPFP Trigger: GGGGAAGGGAAAGCCGGTCCTCCAGGAGGCGGTTCACGCGCAGCGTTTCCTCAAGGTGGTAGAGGACGGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 ENSMUST00000177145.8 |
||
| CDS TCA 72 bp | ACAGCCCCTGGAAACCGGCCCCGTCCTCTACCACCTTaGGGAAACGCTGCGCGTGAACCGCCTCCTGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: TAPGNRPRPLPP*GNAAREPPPGG Trigger: TCCTCCAGGAGGCGGTTCACGCGCAGCGTTTCCTCAAGGTGGTAGAGGACGGGGCCGGTTTCCAGGGGCTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 ENSMUST00000177145.8 |
||
| CDS CAA 90 bp | TGGAGGCCCAGGAGGAAGTGGACCCAGCGGAGGCTGCCCAAAAGGTaGTCCAGGAAAAAGAACTGGTGGTGGAGGGCGGTCTCCTCGGTT | + |
|
Preference number: 6 (lower is better) Translates to: WRPRRKWTQRRLPKR*SRKKNWWWRAVSSV Trigger: AACCGAGGAGACCGCCCTCCACCACCAGTTCTTTTTCCTGGACAACCTTTTGGGCAGCCTCCGCTGGGTCCACTTCCTCCTGGGCCTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 ENSMUST00000177145.8 |
||
| CDS CCA 72 bp | ATTCACATGTGGAGCTGGTGGCGGGGCACCTGGAGGTaGTCCCGGAAGATGTGGAGGAGGAGCAAGTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: IHMWSWWRGTWR*SRKMWRRSKCE Trigger: CTCACACTTGCTCCTCCTCCACATCTTCCGGGACCACCTCCAGGTGCCCCGCCACCAGCTCCACATGTGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 ENSMUST00000177145.8 |
||
| CDS CCA 72 bp | CGGAGGCTGCCCAAAAGGTTGTCCAGGAAAAAGAACTaGTGGTGGAGGGCGGTCTCCTCGGTTAGGAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RRLPKRLSRKKN*WWRAVSSVRRS Trigger: GGACCTCCTAACCGAGGAGACCGCCCTCCACCACCAGTTCTTTTTCCTGGACAACCTTTTGGGCAGCCTCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 ENSMUST00000177145.8 |
||
| CDS CCA 72 bp | AGGCTGCCCAAAAGGTTGTCCAGGAAAAAGAACTGGTaGTGGAGGGCGGTCTCCTCGGTTAGGAGGTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RLPKRLSRKKNW*WRAVSSVRRSC Trigger: GCAGGACCTCCTAACCGAGGAGACCGCCCTCCACCACCAGTTCTTTTTCCTGGACAACCTTTTGGGCAGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 ENSMUST00000177145.8 |
||
| CDS CAA 72 bp | CCCTATCATATGGGGGAGGTCGGCCATATGGGTCTGTaGGTGGTGGACCTCGACTATCTGATGTTGGCATGC | + |
|
Preference number: 6 (lower is better) Translates to: PYHMGEVGHMGL*VVDLDYLMLAC Trigger: GCATGCCAACATCAGATAGTCGAGGTCCACCACCAACAGACCCATATGGCCGACCTCCCCCATATGATAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 ENSMUST00000177145.8 |
||
| CDS CAA 90 bp | TATGGCGACGACTCTTTTCCCGTGATCTACTATGGTCCCGTTCTCTaGATCGTTCACGTCTTCTGGATCCAGACCCATAGGACTTGGACT | + |
|
Preference number: 6 (lower is better) Translates to: YGDDSFPVIYYGPVL*IVHVFWIQTHRTWT Trigger: AGTCCAAGTCCTATGGGTCTGGATCCAGAAGACGTGAACGATCAAGAGAACGGGACCATAGTAGATCACGGGAAAAGAGTCGTCGCCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176480.8 ENSMUST00000176686.8 |
||
| CDS TCA 72 bp | GCCATATGGGTCTGTTGGTGGTGGACCTCGACTATCTaGTGTTGGCATGCCACTATTAGTTGGTGGAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: AIWVCWWWTSTI*CWHATISWWRK Trigger: TTTCCTCCACCAACTAATAGTGGCATGCCAACATCAGATAGTCGAGGTCCACCACCAACAGACCCATATGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 ENSMUST00000177145.8 |
||
| CDS CAA 72 bp | GACTCTTTTCCCGTGATCTACTATGGTCCCGTTCTCTaGATCGTTCACGTCTGGATCCAGACCCATAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: DSFPVIYYGPVL*IVHVWIQTHRT Trigger: AGTCCTATGGGTCTGGATCCAGACGTGAACGATCAAGAGAACGGGACCATAGTAGATCACGGGAAAAGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000177145.8 |
||
| CDS CAA 72 bp | GACTCTTTTCCCGTGATCTACTATGGTCCCGTTCTCTaGATCGTTCACGTCTTCTGGATCCAGACCCATAGG | + |
|
Preference number: 6 (lower is better) Translates to: DSFPVIYYGPVL*IVHVFWIQTHR Trigger: CCTATGGGTCTGGATCCAGAAGACGTGAACGATCAAGAGAACGGGACCATAGTAGATCACGGGAAAAGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176480.8 ENSMUST00000176686.8 |
||
| CDS CCA 72 bp | GATTTATGGCGACGACTCTTTTCCCGTGATCTACTATaGTCCCGTTCTCTTGATCGTTCACGTCTGGATCCA | + |
|
Preference number: 6 (lower is better) Translates to: DLWRRLFSRDLL*SRSLDRSRLDP Trigger: TGGATCCAGACGTGAACGATCAAGAGAACGGGACCATAGTAGATCACGGGAAAAGAGTCGTCGCCATAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000177145.8 |
||
| CDS CCA 72 bp | GATTTATGGCGACGACTCTTTTCCCGTGATCTACTATaGTCCCGTTCTCTTGATCGTTCACGTCTTCTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: DLWRRLFSRDLL*SRSLDRSRLLD Trigger: ATCCAGAAGACGTGAACGATCAAGAGAACGGGACCATAGTAGATCACGGGAAAAGAGTCGTCGCCATAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176480.8 ENSMUST00000176686.8 |
||
| CDS TCA 72 bp | CCTGACTGTGTAGTTTTCCTGGATTGCATTTCAAATTaGCTCAGGAACTGCTTATTGCATGGAGTTACAACA | + |
|
Preference number: 6 (lower is better) Translates to: PDCVVFLDCISN*LRNCLLHGVTT Trigger: TGTTGTAACTCCATGCAATAAGCAGTTCCTGAGTCAATTTGAAATGCAATCCAGGAAAACTACACAGTCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 ENSMUST00000177145.8 |
||
| CDS GCA 72 bp | TGGATTGCATTTCAAATTGACTCAGGAACTGCTTATTaGATGGAGTTACAACAGGACTCTGACCATGAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: WIAFQIDSGTAY*MELQQDSDHEV Trigger: AACTTCATGGTCAGAGTCCTGTTGTAACTCCATGCAATAAGCAGTTCCTGAGTCAATTTGAAATGCAATCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 ENSMUST00000177145.8 |
||
| CDS CCA 72 bp | TTGCATTTCAAATTGACTCAGGAACTGCTTATTGCATaGAGTTACAACAGGACTCTGACCATGAAGTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LHFKLTQELLIA*SYNRTLTMKFS Trigger: AGAGAACTTCATGGTCAGAGTCCTGTTGTAACTCCATGCAATAAGCAGTTCCTGAGTCAATTTGAAATGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069168.13 ENSMUST00000176670.8 ENSMUST00000176686.8 ENSMUST00000177145.8 |
||