Pregenerated sensors for CPSF4L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018727Ensembl transcript IDs: ENSMUST00000018871.8, ENSMUST00000100248.6, ENSMUST00000106617.8, ENSMUST00000173655.8
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGAGCTCACTGGACCACTGGGTACAGAATACCCTGAGGAGGCCATaGAGCCAGCCCTTACCTAGGAGAACGTCCAACTCCCTCGCTTCA | + |
|
Preference number: 1 (lower is better) Translates to: WSSLDHWVQNTLRRP*SQPLPRRTSNSLAS Trigger: TGAAGCGAGGGAGTTGGACGTTCTCCTAGGTAAGGGCTGGCTCCATGGCCTCCTCAGGGTATTCTGTACCCAGTGGTCCAGTGAGCTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| 3UTR TCA 90 bp | AGCCAGGTAGAGGAGGCTCTTTCTGCATCCTGCATCTCATTACCGTaGTGGAGCTCACTGGACCACTGGGTACAGAATACCCTGAGGAGG | + |
|
Preference number: 1 (lower is better) Translates to: SQVEEALSASCISLP*WSSLDHWVQNTLRR Trigger: CCTCCTCAGGGTATTCTGTACCCAGTGGTCCAGTGAGCTCCATCACGGTAATGAGATGCAGGATGCAGAAAGAGCCTCCTCTACCTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| 3UTR TCA 90 bp | GCAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGATGTTGACTGACTaGCTCTGTAGAGTTCACAGCTTCAAGTGCACTTTGTTCTCCTGG | + |
|
Preference number: 1 (lower is better) Translates to: AVCGSVGAKHGMLTD*LCRVHSFKCTLFSW Trigger: CCAGGAGAACAAAGTGCACTTGAAGCTGTGAACTCTACAGAGTCAGTCAGTCAACATCCCATGCTTGGCTCCCACGCTCCCGCAGACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| 3UTR TCA 90 bp | TCTGTAGAGTTCACAGCTTCAAGTGCACTTTGTTCTCCTGGCTCATaGATGACTCCTCCCTTCCACAGTCAGCTGACCTCGTATCCTGCT | + |
|
Preference number: 1 (lower is better) Translates to: SVEFTASSALCSPGS*MTPPFHSQLTSYPA Trigger: AGCAGGATACGAGGTCAGCTGACTGTGGAAGGGAGGAGTCATTCATGAGCCAGGAGAACAAAGTGCACTTGAAGCTGTGAACTCTACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| 3UTR GCA 90 bp | TCAGCTGACCTCGTATCCTGCTGTATGATTGGCATCTCGGGCATGTaGAGGATAAATGGAAATAAGCCAGGTAGAGGAGGCTCTTTCTGC | + |
|
Preference number: 1 (lower is better) Translates to: SADLVSCCMIGISGM*RINGNKPGRGGSFC Trigger: GCAGAAAGAGCCTCCTCTACCTGGCTTATTTCCATTTATCCTGCACATGCCCGAGATGCCAATCATACAGCAGGATACGAGGTCAGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGCCGTTGACCCATAGCAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGATGTTGGGTACAGAATACCCTaGGGAGGCCATGGAGCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: RPLTHSSLRERGSQAWDVGYRIP*GGHGAS Trigger: GCTGGCTCCATGGCCTCCTCAGGGTATTCTGTACCC...AACATCCCATGCTTGGCTCCCACGCTCCCGCAGACTGCTATGGGTCAACGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGCCGTTGACCCATAGCAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGATGTTACCCTGAGGAGGCCATaGAGCCAGCCCTTACCTAGG | + |
|
Preference number: 2 (lower is better) Translates to: RPLTHSSLRERGSQAWDVTLRRP*SQPLPR Trigger: CCTAGGTAAGGGCTGGCTCCATGGCCTCCTCAGGGT...AACATCCCATGCTTGGCTCCCACGCTCCCGCAGACTGCTATGGGTCAACGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| 3UTR CAA 90 bp | CAATCGTTGGATCGGATTGCCCGTTTTTGGGAGCACTTGAGGCCGTaGACCCATAGCAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: QSLDRIARFWEHLRP*THSSLRERGSQAWD Trigger: ATCCCATGCTTGGCTCCCACGCTCCCGCAGACTGCTATGGGTCAACGGCCTCAAGTGCTCCCAAAAACGGGCAATCCGATCCAACGATTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGCCGTTGACCCATAGCAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGATGTTTGTTCTCCTGGCTCATaGATGACTCCTCCCTTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: RPLTHSSLRERGSQAWDVCSPGS*MTPPFH Trigger: GTGGAAGGGAGGAGTCATTCATGAGCCAGGAGAACA...AACATCCCATGCTTGGCTCCCACGCTCCCGCAGACTGCTATGGGTCAACGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| 3UTR-3UTR TCA 90 bp | CTCTTTCTGCATCCTGCATCTCATTACCGTGATGGAGCTCACTGGACCACTGGGGGGTACAGAATACCCTaGGGAGGCCATGGAGCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: LFLHPASHYRDGAHWTTGGYRIP*GGHGAS Trigger: GCTGGCTCCATGGCCTCCTCAGGGTATTCTGTACCC...CCCAGTGGTCCAGTGAGCTCCATCACGGTAATGAGATGCAGGATGCAGAAAGAG 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGCCGTTGACCCATAGCAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGATGTTAGAGGAGGCTCTTTCTaGATCCTGCATCTCATTACC | + |
|
Preference number: 2 (lower is better) Translates to: RPLTHSSLRERGSQAWDVRGGSF*ILHLIT Trigger: GGTAATGAGATGCAGGATGCAGAAAGAGCCTCCTCT...AACATCCCATGCTTGGCTCCCACGCTCCCGCAGACTGCTATGGGTCAACGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGCCGTTGACCCATAGCAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGATGTTGTTCACAGCTTCAAGTaGACTTTGTTCTCCTGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: RPLTHSSLRERGSQAWDVVHSFK*TLFSWL Trigger: GAGCCAGGAGAACAAAGTGCACTTGAAGCTGTGAAC...AACATCCCATGCTTGGCTCCCACGCTCCCGCAGACTGCTATGGGTCAACGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| 3UTR CCA 72 bp | CTGGACCACTGGGTACAGAATACCCTGAGGAGGCCATaGAGCCAGCCCTTACCTAGGAGAACGTCCAACTCC | + |
|
Preference number: 3 (lower is better) Translates to: LDHWVQNTLRRP*SQPLPRRTSNS Trigger: GGAGTTGGACGTTCTCCTAGGTAAGGGCTGGCTCCATGGCCTCCTCAGGGTATTCTGTACCCAGTGGTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGCCGTTGACCCATAGCAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGATGTTAGCTTCAAGTGCACTTaGTTCTCCTGGCTCATGAAT | + |
|
Preference number: 3 (lower is better) Translates to: RPLTHSSLRERGSQAWDVSFKCT*FSWLMN Trigger: ATTCATGAGCCAGGAGAACAAAGTGCACTTGAAGCT...AACATCCCATGCTTGGCTCCCACGCTCCCGCAGACTGCTATGGGTCAACGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| 3UTR TCA 72 bp | CAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGATGTTaGCTGACTGACTCTGTAGAGTTCACAGCTTCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: QSAGAWEPSMGC*LTDSVEFTASS Trigger: ACTTGAAGCTGTGAACTCTACAGAGTCAGTCAGTCAACATCCCATGCTTGGCTCCCACGCTCCCGCAGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| 3UTR TCA 72 bp | GGGAGCGTGGGAGCCAAGCATGGGATGTTGACTGACTaGCTCTGTAGAGTTCACAGCTTCAAGTGCACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: GSVGAKHGMLTD*LCRVHSFKCTL Trigger: CAAAGTGCACTTGAAGCTGTGAACTCTACAGAGTCAGTCAGTCAACATCCCATGCTTGGCTCCCACGCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| 3UTR TCA 72 bp | GGAGAACGTCCAACTCCCTCGCTTCAGACTAGGTTTTaGTGGCTCCAACGGGTACAGCTTACTTTGCTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GERPTPSLQTRF*WLQRVQLTLLA Trigger: TGCCAGCAAAGTAAGCTGTACCCGTTGGAGCCATCAAAACCTAGTCTGAAGCGAGGGAGTTGGACGTTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| 3UTR CCA 72 bp | TGTAGAGTTCACAGCTTCAAGTGCACTTTGTTCTCCTaGCTCATGAATGACTCCTCCCTTCCACAGTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: CRVHSFKCTLFS*LMNDSSLPQSA Trigger: AGCTGACTGTGGAAGGGAGGAGTCATTCATGAGCCAGGAGAACAAAGTGCACTTGAAGCTGTGAACTCTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCGTTGACCCATAGCAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGATGTTGGTGTGCCCTTGAGCTaGAGGCCTGAGGCAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: RPLTHSSLRERGSQAWDVGVPLS*RPEADS Trigger: GGAGTCTGCCTCAGGCCTGCAGCTCAAGGGCACACC...AACATCCCATGCTTGGCTCCCACGCTCCCGCAGACTGCTATGGGTCAACGGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCGTTGACCCATAGCAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGATGTTGTGGACCATGGGCTTTaGCTGGAAAGGGGACACCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPLTHSSLRERGSQAWDVVDHGL*LERGHQ Trigger: CTGGTGTCCCCTTTCCAGGCAAAGCCCATGGTCCAC...AACATCCCATGCTTGGCTCCCACGCTCCCGCAGACTGCTATGGGTCAACGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000173655.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCGTTGACCCATAGCAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGATGTTGGCAGTCCTGGAGCTTaGGAACTGGCTTCAAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RPLTHSSLRERGSQAWDVGSPGA*ELASSA Trigger: TGCACTTGAAGCCAGTTCTCAAGCTCCAGGACTGCC...AACATCCCATGCTTGGCTCCCACGCTCCCGCAGACTGCTATGGGTCAACGGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCGTTGACCCATAGCAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGATGTTAATCCCATGGCTGGTTaGCAGGCTGCAGTGCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RPLTHSSLRERGSQAWDVNPMAG*QAAVPK Trigger: TTTGGGCACTGCAGCCTGTCAACCAGCCATGGGATT...AACATCCCATGCTTGGCTCCCACGCTCCCGCAGACTGCTATGGGTCAACGGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018871.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCGTTGACCCATAGCAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGATGTTTACCACGGGCAGTCCTaGAGCTTGAGAACTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RPLTHSSLRERGSQAWDVYHGQS*SLRTGF Trigger: GAAGCCAGTTCTCAAGCTCCAGGACTGCCCGTGGTA...AACATCCCATGCTTGGCTCCCACGCTCCCGCAGACTGCTATGGGTCAACGGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCGTTGACCCATAGCAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGATGTTTCACTGTCCATGCCCTaGAAAGGCAGTAGCCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RPLTHSSLRERGSQAWDVSLSMP*KGSSPV Trigger: CACTGGGCTACTGCCTTTCCAGGGCATGGACAGTGA...AACATCCCATGCTTGGCTCCCACGCTCCCGCAGACTGCTATGGGTCAACGGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100248.6 |
||
| CDS-3UTR TCA 90 bp | CTCTTTCTGCATCCTGCATCTCATTACCGTGATGGAGCTCACTGGACCACTGGGAGCACCTCCAGGACCTaGGCAGGGGACACAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LFLHPASHYRDGAHWTTGSTSRT*AGDTGI Trigger: GATGCCTGTGTCCCCTGCTCAGGTCCTGGAGGTGCT...CCCAGTGGTCCAGTGAGCTCCATCACGGTAATGAGATGCAGGATGCAGAAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100248.6 |
||
| CDS-3UTR TCA 90 bp | AGGCCGTTGACCCATAGCAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGATGTTAATCCCATGGCTGGTTaGCAGGCTGCAGCTTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: RPLTHSSLRERGSQAWDVNPMAG*QAAASH Trigger: ATGTGAAGCTGCAGCCTGTCAACCAGCCATGGGATT...AACATCCCATGCTTGGCTCCCACGCTCCCGCAGACTGCTATGGGTCAACGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100248.6 ENSMUST00000173655.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCGTTGACCCATAGCAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGATGTTGAAGTTGCACACAGCTaGACTGGACTTGTCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: RPLTHSSLRERGSQAWDVEVAHS*TGLVHA Trigger: GGCATGGACAAGTCCAGTTCAGCTGTGTGCAACTTC...AACATCCCATGCTTGGCTCCCACGCTCCCGCAGACTGCTATGGGTCAACGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173655.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCGTTGACCCATAGCAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGATGTTCTCGAAGCCAGTGTTTaGACACCACCAGCTTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RPLTHSSLRERGSQAWDVLEASV*TPPASH Trigger: GTGAGAAGCTGGTGGTGTGCAAACACTGGCTTCGAG...AACATCCCATGCTTGGCTCCCACGCTCCCGCAGACTGCTATGGGTCAACGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTTCTGCATCCTGCATCTCATTACCGTGATGGAGCTCACTGGACCACTGGGGGTGTGCCCTTGAGCTaGAGGCCTGAGGCAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LFLHPASHYRDGAHWTTGGVPLS*RPEADS Trigger: GGAGTCTGCCTCAGGCCTGCAGCTCAAGGGCACACC...CCCAGTGGTCCAGTGAGCTCCATCACGGTAATGAGATGCAGGATGCAGAAAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCGTTGACCCATAGCAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGATGTTAACTGGACTTGTCCATaGCCTGGAAAGGCAGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RPLTHSSLRERGSQAWDVNWTCP*PGKAVA Trigger: GGCTACTGCCTTTCCAGGGCATGGACAAGTCCAGTT...AACATCCCATGCTTGGCTCCCACGCTCCCGCAGACTGCTATGGGTCAACGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173655.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCGTTGACCCATAGCAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGATGTTTCCTTGCAGAACCCTTaGTTATACCACGGGCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RPLTHSSLRERGSQAWDVSLQNP*LYHGQS Trigger: GGACTGCCCGTGGTATAACCAAGGGTTCTGCAAGGA...AACATCCCATGCTTGGCTCCCACGCTCCCGCAGACTGCTATGGGTCAACGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCGTTGACCCATAGCAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGATGTTCTTCAGACTAGGTTTTaGTGGCTCCAACGGGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: RPLTHSSLRERGSQAWDVLQTRF*WLQRVQ Trigger: CTGTACCCGTTGGAGCCATCAAAACCTAGTCTGAAG...AACATCCCATGCTTGGCTCCCACGCTCCCGCAGACTGCTATGGGTCAACGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018871.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCGTTGACCCATAGCAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGATGTTCTGACGTCATACTGGTaGAGGAAGTCGCAGCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: RPLTHSSLRERGSQAWDVLTSYW*RKSQQS Trigger: TGATTGCTGCGACTTCCTGCACCAGTATGACGTCAG...AACATCCCATGCTTGGCTCCCACGCTCCCGCAGACTGCTATGGGTCAACGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCGTTGACCCATAGCAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGATGTTGGGGACCTACTTCCTTaGAGAACCCTTGGTTATACC | + |
|
Preference number: 4 (lower is better) Translates to: RPLTHSSLRERGSQAWDVGDLLP*RTLGYT Trigger: GGTATAACCAAGGGTTCTGCAAGGAAGTAGGTCCCC...AACATCCCATGCTTGGCTCCCACGCTCCCGCAGACTGCTATGGGTCAACGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018871.8 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCGTTGACCCATAGCAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGATGTTTCTGACCGTGGACCATaGGCTTTGCCTTCACATTAC | + |
|
Preference number: 4 (lower is better) Translates to: RPLTHSSLRERGSQAWDVSDRGP*ALPSHY Trigger: GTAATGTGAAGGCAAAGCCCATGGTCCACGGTCAGA...AACATCCCATGCTTGGCTCCCACGCTCCCGCAGACTGCTATGGGTCAACGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106617.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCGTTGACCCATAGCAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGATGTTAGAACTGGCTTCAAGTaGAGGAACAGGCATTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RPLTHSSLRERGSQAWDVRTGFK*RNRHSL Trigger: CAAGGAATGCCTGTTCCTGCACTTGAAGCCAGTTCT...AACATCCCATGCTTGGCTCCCACGCTCCCGCAGACTGCTATGGGTCAACGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTTCTGCATCCTGCATCTCATTACCGTGATGGAGCTCACTGGACCACTGGGGTGGACCATGGGCTTTaGCTGGAAAGGGGACACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFLHPASHYRDGAHWTTGVDHGL*LERGHQ Trigger: CTGGTGTCCCCTTTCCAGGCAAAGCCCATGGTCCAC...CCCAGTGGTCCAGTGAGCTCCATCACGGTAATGAGATGCAGGATGCAGAAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000173655.8 |
||
| CDS-3UTR GCA 90 bp | AACGTCCAACTCCCTCGCTTCAGACTAGGTTTTGATGGCTCCAACGGGTACAGCGTGGACCATGGGCTTTaGCTGGAAAGGGGACACCAG | + |
|
Preference number: 4 (lower is better) Translates to: NVQLPRFRLGFDGSNGYSVDHGL*LERGHQ Trigger: CTGGTGTCCCCTTTCCAGGCAAAGCCCATGGTCCAC...GCTGTACCCGTTGGAGCCATCAAAACCTAGTCTGAAGCGAGGGAGTTGGACGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100248.6 ENSMUST00000173655.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTTCTGCATCCTGCATCTCATTACCGTGATGGAGCTCACTGGACCACTGGGGCCACTCACTGTCCATaGCCTGGAAAGGCAGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LFLHPASHYRDGAHWTTGATHCP*PGKAVA Trigger: GGCTACTGCCTTTCCAGGGCATGGACAGTGAGTGGC...CCCAGTGGTCCAGTGAGCTCCATCACGGTAATGAGATGCAGGATGCAGAAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100248.6 |
||
| CDS-3UTR TCA 90 bp | CTCTTTCTGCATCCTGCATCTCATTACCGTGATGGAGCTCACTGGACCACTGGGGGCAGTCCTGGAGCTTaGGAACTGGCTTCAAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LFLHPASHYRDGAHWTTGGSPGA*ELASSA Trigger: TGCACTTGAAGCCAGTTCTCAAGCTCCAGGACTGCC...CCCAGTGGTCCAGTGAGCTCCATCACGGTAATGAGATGCAGGATGCAGAAAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS-3UTR TCA 90 bp | AACGTCCAACTCCCTCGCTTCAGACTAGGTTTTGATGGCTCCAACGGGTACAGCGGCAGTCCTGGAGCTTaGGAACTGGCTTCAAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NVQLPRFRLGFDGSNGYSGSPGA*ELASSA Trigger: TGCACTTGAAGCCAGTTCTCAAGCTCCAGGACTGCC...GCTGTACCCGTTGGAGCCATCAAAACCTAGTCTGAAGCGAGGGAGTTGGACGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS-3UTR TCA 90 bp | CTCTTTCTGCATCCTGCATCTCATTACCGTGATGGAGCTCACTGGACCACTGGGCTGAACTGGACTCTCTaGGGCAGGAGGTGGAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LFLHPASHYRDGAHWTTGLNWTL*GRRWKV Trigger: AACCTTCCACCTCCTGCCTCAGAGAGTCCAGTTCAG...CCCAGTGGTCCAGTGAGCTCCATCACGGTAATGAGATGCAGGATGCAGAAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100248.6 |
||
| CDS-3UTR CCA 90 bp | CTCTTTCTGCATCCTGCATCTCATTACCGTGATGGAGCTCACTGGACCACTGGGTACCACGGGCAGTCCTaGAGCTTGAGAACTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LFLHPASHYRDGAHWTTGYHGQS*SLRTGF Trigger: GAAGCCAGTTCTCAAGCTCCAGGACTGCCCGTGGTA...CCCAGTGGTCCAGTGAGCTCCATCACGGTAATGAGATGCAGGATGCAGAAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS-3UTR CCA 90 bp | AACGTCCAACTCCCTCGCTTCAGACTAGGTTTTGATGGCTCCAACGGGTACAGCTACCACGGGCAGTCCTaGAGCTTGAGAACTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NVQLPRFRLGFDGSNGYSYHGQS*SLRTGF Trigger: GAAGCCAGTTCTCAAGCTCCAGGACTGCCCGTGGTA...GCTGTACCCGTTGGAGCCATCAAAACCTAGTCTGAAGCGAGGGAGTTGGACGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS-3UTR CCA 90 bp | AACGTCCAACTCCCTCGCTTCAGACTAGGTTTTGATGGCTCCAACGGGTACAGCGACTTGTCCATGCCCTaGAAAGGCAGTAGCCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NVQLPRFRLGFDGSNGYSDLSMP*KGSSPV Trigger: CACTGGGCTACTGCCTTTCCAGGGCATGGACAAGTC...GCTGTACCCGTTGGAGCCATCAAAACCTAGTCTGAAGCGAGGGAGTTGGACGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173655.8 |
||
| CDS-3UTR GCA 90 bp | AACGTCCAACTCCCTCGCTTCAGACTAGGTTTTGATGGCTCCAACGGGTACAGCCTCGAAGCCAGTGTTTaGACACCACCAGCTTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NVQLPRFRLGFDGSNGYSLEASV*TPPASH Trigger: GTGAGAAGCTGGTGGTGTGCAAACACTGGCTTCGAG...GCTGTACCCGTTGGAGCCATCAAAACCTAGTCTGAAGCGAGGGAGTTGGACGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTTCTGCATCCTGCATCTCATTACCGTGATGGAGCTCACTGGACCACTGGGCTCGAAGCCAGTGTTTaGACACCACCAGCTTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LFLHPASHYRDGAHWTTGLEASV*TPPASH Trigger: GTGAGAAGCTGGTGGTGTGCAAACACTGGCTTCGAG...CCCAGTGGTCCAGTGAGCTCCATCACGGTAATGAGATGCAGGATGCAGAAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTTCTGCATCCTGCATCTCATTACCGTGATGGAGCTCACTGGACCACTGGGTCCTTGCAGAACCCTTaGTTATACCACGGGCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LFLHPASHYRDGAHWTTGSLQNP*LYHGQS Trigger: GGACTGCCCGTGGTATAACCAAGGGTTCTGCAAGGA...CCCAGTGGTCCAGTGAGCTCCATCACGGTAATGAGATGCAGGATGCAGAAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTTCTGCATCCTGCATCTCATTACCGTGATGGAGCTCACTGGACCACTGGGTGCACACAGCTGAACTaGACTTGTCCATGCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LFLHPASHYRDGAHWTTGCTQLN*TCPCPG Trigger: TCCAGGGCATGGACAAGTCCAGTTCAGCTGTGTGCA...CCCAGTGGTCCAGTGAGCTCCATCACGGTAATGAGATGCAGGATGCAGAAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173655.8 |
||
| CDS-3UTR TCA 90 bp | CTCTTTCTGCATCCTGCATCTCATTACCGTGATGGAGCTCACTGGACCACTGGGGCCAGTAGAAGTTGTTaGATCCCATGGCTGGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LFLHPASHYRDGAHWTTGASRSC*IPWLVD Trigger: GTCAACCAGCCATGGGATTCAACAACTTCTACTGGC...CCCAGTGGTCCAGTGAGCTCCATCACGGTAATGAGATGCAGGATGCAGAAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000173655.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTTCTGCATCCTGCATCTCATTACCGTGATGGAGCTCACTGGACCACTGGGCTGACGTCATACTGGTaGAGGAAGTCGCAGCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: LFLHPASHYRDGAHWTTGLTSYW*RKSQQS Trigger: TGATTGCTGCGACTTCCTGCACCAGTATGACGTCAG...CCCAGTGGTCCAGTGAGCTCCATCACGGTAATGAGATGCAGGATGCAGAAAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTTCTGCATCCTGCATCTCATTACCGTGATGGAGCTCACTGGACCACTGGGGGGGACCTACTTCCTTaGAGAACCCTTGGTTATACC | + |
|
Preference number: 4 (lower is better) Translates to: LFLHPASHYRDGAHWTTGGDLLP*RTLGYT Trigger: GGTATAACCAAGGGTTCTGCAAGGAAGTAGGTCCCC...CCCAGTGGTCCAGTGAGCTCCATCACGGTAATGAGATGCAGGATGCAGAAAGAG 52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 3 transcripts: ENSMUST00000018871.8 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTTCTGCATCCTGCATCTCATTACCGTGATGGAGCTCACTGGACCACTGGGGTGGACCATGGGCTTTaGCTTCACATTACTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LFLHPASHYRDGAHWTTGVDHGL*LHITGM Trigger: CATCCCAGTAATGTGAAGGCAAAGCCCATGGTCCAC...CCCAGTGGTCCAGTGAGCTCCATCACGGTAATGAGATGCAGGATGCAGAAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106617.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTTCTGCATCCTGCATCTCATTACCGTGATGGAGCTCACTGGACCACTGGGTACAGCTTACTTTGCTaGCATGGTGGCCTAAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LFLHPASHYRDGAHWTTGYSLLC*HGGLRC Trigger: GCACCTTAGGCCACCATGCCAGCAAAGTAAGCTGTA...CCCAGTGGTCCAGTGAGCTCCATCACGGTAATGAGATGCAGGATGCAGAAAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018871.8 |
||
| CDS-3UTR CCA 90 bp | AACGTCCAACTCCCTCGCTTCAGACTAGGTTTTGATGGCTCCAACGGGTACAGCGCAGCTTCACATTACTaGGATGGAACGGAGGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: NVQLPRFRLGFDGSNGYSAASHY*DGTEDS Trigger: TGAGTCCTCCGTTCCATCCCAGTAATGTGAAGCTGC...GCTGTACCCGTTGGAGCCATCAAAACCTAGTCTGAAGCGAGGGAGTTGGACGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100248.6 ENSMUST00000173655.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTTCTGCATCCTGCATCTCATTACCGTGATGGAGCTCACTGGACCACTGGGGCAGCTTCACATTACTaGGATGGAACGGAGGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LFLHPASHYRDGAHWTTGAASHY*DGTEDS Trigger: TGAGTCCTCCGTTCCATCCCAGTAATGTGAAGCTGC...CCCAGTGGTCCAGTGAGCTCCATCACGGTAATGAGATGCAGGATGCAGAAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100248.6 ENSMUST00000173655.8 |
||
| CDS-3UTR GCA 90 bp | AACGTCCAACTCCCTCGCTTCAGACTAGGTTTTGATGGCTCCAACGGGTACAGCAGAACTGGCTTCAAGTaGAGGAACAGGCATTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NVQLPRFRLGFDGSNGYSRTGFK*RNRHSL Trigger: CAAGGAATGCCTGTTCCTGCACTTGAAGCCAGTTCT...GCTGTACCCGTTGGAGCCATCAAAACCTAGTCTGAAGCGAGGGAGTTGGACGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTTCTGCATCCTGCATCTCATTACCGTGATGGAGCTCACTGGACCACTGGGTTGCCTTCACATTACTaGGATGGAACGGAGGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LFLHPASHYRDGAHWTTGLPSHY*DGTEDS Trigger: TGAGTCCTCCGTTCCATCCCAGTAATGTGAAGGCAA...CCCAGTGGTCCAGTGAGCTCCATCACGGTAATGAGATGCAGGATGCAGAAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106617.8 |
||
| CDS GCA 90 bp | ACTTTGCTGGCATGGTGGCCTAAGGTGCAGGGTGTGCCCTTGAGCTaGAGGCCTGAGGCAGACTCCACCTCCTCTGACCGTGGACCATGG | + |
|
Preference number: 5 (lower is better) Translates to: TLLAWWPKVQGVPLS*RPEADSTSSDRGPW Trigger: CCATGGTCCACGGTCAGAGGAGGTGGAGTCTGCCTCAGGCCTGCAGCTCAAGGGCACACCCTGCACCTTAGGCCACCATGCCAGCAAAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018871.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCGTTGACCCATAGCAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGATGTTGCTGCAGTGCCCAAATaGGCACTGAGGTCCCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RPLTHSSLRERGSQAWDVAAVPK*ALRSLG Trigger: CCCGAGGGACCTCAGTGCCAATTTGGGCACTGCAGC...AACATCCCATGCTTGGCTCCCACGCTCCCGCAGACTGCTATGGGTCAACGGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018871.8 |
||
| CDS TCA 90 bp | ATACCCAGAAGCTGTGTGGGAGAGACGCACAGCACCTCCAGGACCTaGGCAGGGGACACAGGCATCGCCACTCACTGTCCATGCCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: IPRSCVGETHSTSRT*AGDTGIATHCPCPG Trigger: TCCAGGGCATGGACAGTGAGTGGCGATGCCTGTGTCCCCTGCTCAGGTCCTGGAGGTGCTGTGCGTCTCTCCCACACAGCTTCTGGGTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100248.6 |
||
| CDS GCA 90 bp | GGAAGGTTTCGGGGGCACCCAGGGAGCTCTGGCAGCTCGGAAGTCTaGCTTTCTATCCCGGGCAGTGAATACCCAGAAGCTGTGTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GRFRGHPGSSGSSEV*LSIPGSEYPEAVWE Trigger: CTCCCACACAGCTTCTGGGTATTCACTGCCCGGGATAGAAAGGCAGACTTCCGAGCTGCCAGAGCTCCCTGGGTGCCCCCGAAACCTTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100248.6 |
||
| CDS-3UTR CAA 90 bp | AGGCCGTTGACCCATAGCAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGATGTTCGTGGACCATGGGCTTaGCCTGGAAAGGGGACACCA | + |
|
Preference number: 5 (lower is better) Translates to: RPLTHSSLRERGSQAWDVRGPWA*PGKGTP Trigger: TGGTGTCCCCTTTCCAGGCAAAGCCCATGGTCCACG...AACATCCCATGCTTGGCTCCCACGCTCCCGCAGACTGCTATGGGTCAACGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000173655.8 |
||
| CDS TCA 90 bp | AGGGAGCTCTGGCAGCTCGGAAGTCTGCCTTTCTATCCCGGGCAGTaGATACCCAGAAGCTGTGTGGGAGAGACGCACAGCACCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RELWQLGSLPFYPGQ*IPRSCVGETHSTSR Trigger: CCTGGAGGTGCTGTGCGTCTCTCCCACACAGCTTCTGGGTATTCACTGCCCGGGATAGAAAGGCAGACTTCCGAGCTGCCAGAGCTCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100248.6 |
||
| CDS GCA 90 bp | AGTCGCAGCAATCACTCTTCCGGCAGAGGCCTCGAAGCCAGTGTTTaGACACCACCAGCTTCTCACCCTGCTCGTGCCGGAGTGGGCATA | + |
|
Preference number: 5 (lower is better) Translates to: SRSNHSSGRGLEASV*TPPASHPARAGVGI Trigger: TATGCCCACTCCGGCACGAGCAGGGTGAGAAGCTGGTGGTGTGCAAACACTGGCTTCGAGGCCTCTGCCGGAAGAGTGATTGCTGCGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS CCA 90 bp | AGCTGCAGGCCTGAGGCAGACTCCACCTCCTCTGACCGTGGACCATaGGCTTTGCCTTCACATTACTGGGATGGAACGGAGGACTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SCRPEADSTSSDRGP*ALPSHYWDGTEDSS Trigger: AGATGAGTCCTCCGTTCCATCCCAGTAATGTGAAGGCAAAGCCCATGGTCCACGGTCAGAGGAGGTGGAGTCTGCCTCAGGCCTGCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106617.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCGTTGACCCATAGCAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGATGTTTTCCTTGCAGAACCCTaGGTTATACCACGGGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: RPLTHSSLRERGSQAWDVFLAEP*VIPRAV Trigger: GACTGCCCGTGGTATAACCAAGGGTTCTGCAAGGAA...AACATCCCATGCTTGGCTCCCACGCTCCCGCAGACTGCTATGGGTCAACGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCGTTGACCCATAGCAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGATGTTCGTGGACCATGGGCTTaGCCTTCACATTACTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RPLTHSSLRERGSQAWDVRGPWA*PSHYWD Trigger: ATCCCAGTAATGTGAAGGCAAAGCCCATGGTCCACG...AACATCCCATGCTTGGCTCCCACGCTCCCGCAGACTGCTATGGGTCAACGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106617.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCGTTGACCCATAGCAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGATGTTCACAGGGGACCTTCCTaGCAGAACCCTTGGTTATAC | + |
|
Preference number: 5 (lower is better) Translates to: RPLTHSSLRERGSQAWDVHRGPS*QNPWLY Trigger: GTATAACCAAGGGTTCTGCAAGGAAGGTCCCCTGTG...AACATCCCATGCTTGGCTCCCACGCTCCCGCAGACTGCTATGGGTCAACGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100248.6 |
||
| CDS-3UTR CAA 90 bp | AGGCCGTTGACCCATAGCAGTCTGCGGGAGCGTGGGAGCCAAGCATGGGATGTTAACAGGCATTCCTTGTaGCTGCAGTTCCCGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: RPLTHSSLRERGSQAWDVNRHSL*LQFPNL Trigger: CAAGTTCGGGAACTGCAGCAACAAGGAATGCCTGTT...AACATCCCATGCTTGGCTCCCACGCTCCCGCAGACTGCTATGGGTCAACGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS-3UTR CAA 90 bp | CTCTTTCTGCATCCTGCATCTCATTACCGTGATGGAGCTCACTGGACCACTGGGCGTGGACCATGGGCTTaGCCTGGAAAGGGGACACCA | + |
|
Preference number: 5 (lower is better) Translates to: LFLHPASHYRDGAHWTTGRGPWA*PGKGTP Trigger: TGGTGTCCCCTTTCCAGGCAAAGCCCATGGTCCACG...CCCAGTGGTCCAGTGAGCTCCATCACGGTAATGAGATGCAGGATGCAGAAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000173655.8 |
||
| CDS-3UTR CAA 90 bp | CTCTTTCTGCATCCTGCATCTCATTACCGTGATGGAGCTCACTGGACCACTGGGGGGCAGTCCTGGAGCTaGAGAACTGGCTTCAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LFLHPASHYRDGAHWTTGGQSWS*RTGFKC Trigger: GCACTTGAAGCCAGTTCTCAAGCTCCAGGACTGCCC...CCCAGTGGTCCAGTGAGCTCCATCACGGTAATGAGATGCAGGATGCAGAAAGAG 56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS-3UTR CAA 90 bp | AACGTCCAACTCCCTCGCTTCAGACTAGGTTTTGATGGCTCCAACGGGTACAGCGGGCAGTCCTGGAGCTaGAGAACTGGCTTCAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: NVQLPRFRLGFDGSNGYSGQSWS*RTGFKC Trigger: GCACTTGAAGCCAGTTCTCAAGCTCCAGGACTGCCC...GCTGTACCCGTTGGAGCCATCAAAACCTAGTCTGAAGCGAGGGAGTTGGACGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS-3UTR CAA 90 bp | CTCTTTCTGCATCCTGCATCTCATTACCGTGATGGAGCTCACTGGACCACTGGGGAATCCCATGGCTGGTaGACAGGCTGCAGTGCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LFLHPASHYRDGAHWTTGESHGW*TGCSAQ Trigger: TTGGGCACTGCAGCCTGTCAACCAGCCATGGGATTC...CCCAGTGGTCCAGTGAGCTCCATCACGGTAATGAGATGCAGGATGCAGAAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018871.8 |
||
| CDS CCA 90 bp | AGGGGACCTTCCTTGCAGAACCCTTGGTTATACCACGGGCAGTCCTaGAGCTTGAGAACTGGCTTCAAGTGCAGGAACAGGCATTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RGPSLQNPWLYHGQS*SLRTGFKCRNRHSL Trigger: CAAGGAATGCCTGTTCCTGCACTTGAAGCCAGTTCTCAAGCTCCAGGACTGCCCGTGGTATAACCAAGGGTTCTGCAAGGAAGGTCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100248.6 |
||
| CDS-3UTR CAA 90 bp | CTCTTTCTGCATCCTGCATCTCATTACCGTGATGGAGCTCACTGGACCACTGGGGAATCCCATGGCTGGTaGACAGGCTGCAGCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: LFLHPASHYRDGAHWTTGESHGW*TGCSFT Trigger: TGTGAAGCTGCAGCCTGTCAACCAGCCATGGGATTC...CCCAGTGGTCCAGTGAGCTCCATCACGGTAATGAGATGCAGGATGCAGAAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100248.6 ENSMUST00000173655.8 |
||
| CDS-3UTR CAA 90 bp | AACGTCCAACTCCCTCGCTTCAGACTAGGTTTTGATGGCTCCAACGGGTACAGCACAGCTGAACTGGACTaGTCCATGCCCTGGAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: NVQLPRFRLGFDGSNGYSTAELD*SMPWKG Trigger: GCCTTTCCAGGGCATGGACAAGTCCAGTTCAGCTGT...GCTGTACCCGTTGGAGCCATCAAAACCTAGTCTGAAGCGAGGGAGTTGGACGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173655.8 |
||
| CDS CCA 90 bp | GGACCTACTTCCTTGCAGAACCCTTGGTTATACCACGGGCAGTCCTaGAGCTTGAGAACTGGCTTCAAGTGCAGGAACAGGCATTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GPTSLQNPWLYHGQS*SLRTGFKCRNRHSL Trigger: CAAGGAATGCCTGTTCCTGCACTTGAAGCCAGTTCTCAAGCTCCAGGACTGCCCGTGGTATAACCAAGGGTTCTGCAAGGAAGTAGGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018871.8 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS-3UTR CAA 90 bp | CTCTTTCTGCATCCTGCATCTCATTACCGTGATGGAGCTCACTGGACCACTGGGAACAGGCATTCCTTGTaGCTGCAGTTCCCGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: LFLHPASHYRDGAHWTTGNRHSL*LQFPNL Trigger: CAAGTTCGGGAACTGCAGCAACAAGGAATGCCTGTT...CCCAGTGGTCCAGTGAGCTCCATCACGGTAATGAGATGCAGGATGCAGAAAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS-3UTR CAA 90 bp | CTCTTTCTGCATCCTGCATCTCATTACCGTGATGGAGCTCACTGGACCACTGGGAGGGGACCTACTTCCTaGCAGAACCCTTGGTTATAC | + |
|
Preference number: 5 (lower is better) Translates to: LFLHPASHYRDGAHWTTGRGPTS*QNPWLY Trigger: GTATAACCAAGGGTTCTGCAAGGAAGTAGGTCCCCT...CCCAGTGGTCCAGTGAGCTCCATCACGGTAATGAGATGCAGGATGCAGAAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018871.8 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS GCA 72 bp | GCATGGTGGCCTAAGGTGCAGGGTGTGCCCTTGAGCTaGAGGCCTGAGGCAGACTCCACCTCCTCTGACCGT | + |
|
Preference number: 6 (lower is better) Translates to: AWWPKVQGVPLS*RPEADSTSSDR Trigger: ACGGTCAGAGGAGGTGGAGTCTGCCTCAGGCCTGCAGCTCAAGGGCACACCCTGCACCTTAGGCCACCATGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018871.8 |
||
| CDS TCA 72 bp | AGCTGTGTGGGAGAGACGCACAGCACCTCCAGGACCTaGGCAGGGGACACAGGCATCGCCACTCACTGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SCVGETHSTSRT*AGDTGIATHCP Trigger: TGGACAGTGAGTGGCGATGCCTGTGTCCCCTGCTCAGGTCCTGGAGGTGCTGTGCGTCTCTCCCACACAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100248.6 |
||
| CDS GCA 72 bp | CGGGGGCACCCAGGGAGCTCTGGCAGCTCGGAAGTCTaGCTTTCTATCCCGGGCAGTGAATACCCAGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RGHPGSSGSSEV*LSIPGSEYPEA Trigger: AGCTTCTGGGTATTCACTGCCCGGGATAGAAAGGCAGACTTCCGAGCTGCCAGAGCTCCCTGGGTGCCCCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100248.6 |
||
| CDS CCA 72 bp | CCTGAGGCAGACTCCACCTCCTCTGACCGTGGACCATaGGCTTTGCCTGGAAAGGGGACACCAGAGTGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PEADSTSSDRGP*ALPGKGTPECC Trigger: GCAACACTCTGGTGTCCCCTTTCCAGGCAAAGCCCATGGTCCACGGTCAGAGGAGGTGGAGTCTGCCTCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000173655.8 |
||
| CDS CAA 90 bp | AAGTCGCAGCAATCACTCTTCCGGCAGAGGCCTCGAAGCCAGTGTTaGCACACCACCAGCTTCTCACCCTGCTCGTGCCGGAGTGGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: KSQQSLFRQRPRSQC*HTTSFSPCSCRSGH Trigger: ATGCCCACTCCGGCACGAGCAGGGTGAGAAGCTGGTGGTGTGCAAACACTGGCTTCGAGGCCTCTGCCGGAAGAGTGATTGCTGCGACTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS CCA 72 bp | TGGCTCCAACGGGTACAGCTTACTTTGCTGGCATGGTaGCCTAAGGTGCAGGGTGTGCCCTTGAGCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: WLQRVQLTLLAW*PKVQGVPLSCR Trigger: CCTGCAGCTCAAGGGCACACCCTGCACCTTAGGCCACCATGCCAGCAAAGTAAGCTGTACCCGTTGGAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018871.8 |
||
| CDS TCA 72 bp | TGGCAGCTCGGAAGTCTGCCTTTCTATCCCGGGCAGTaGATACCCAGAAGCTGTGTGGGAGAGACGCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: WQLGSLPFYPGQ*IPRSCVGETHS Trigger: GCTGTGCGTCTCTCCCACACAGCTTCTGGGTATTCACTGCCCGGGATAGAAAGGCAGACTTCCGAGCTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100248.6 |
||
| CDS GCA 72 bp | CAGTGTTTGCACACCACCAGCTTCTCACCCTGCTCGTaGCGGAGTGGGCATAGCATCCCTTTCACACAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: QCLHTTSFSPCS*RSGHSIPFTQS Trigger: GCTCTGTGTGAAAGGGATGCTATGCCCACTCCGGCACGAGCAGGGTGAGAAGCTGGTGGTGTGCAAACACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100248.6 ENSMUST00000173655.8 |
||
| CDS GCA 72 bp | CGAAGCCAGTGTTTGCACACCACCAGCTTCTCACCCTaGTCGTGCCGGAGTGGGCATAGCATCCCTTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: RSQCLHTTSFSP*SCRSGHSIPFT Trigger: TGTGAAAGGGATGCTATGCCCACTCCGGCACGAGCAGGGTGAGAAGCTGGTGGTGTGCAAACACTGGCTTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100248.6 ENSMUST00000173655.8 |
||
| CDS CCA 72 bp | CCTGAGGCAGACTCCACCTCCTCTGACCGTGGACCATaGGCTTTGCCTTCACATTACTGGGATGGAACGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PEADSTSSDRGP*ALPSHYWDGTE Trigger: CTCCGTTCCATCCCAGTAATGTGAAGGCAAAGCCCATGGTCCACGGTCAGAGGAGGTGGAGTCTGCCTCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106617.8 |
||
| CDS CCA 72 bp | CTTTCTATCCCGGGCAGTGAATACCCAGAAGCTGTGTaGGAGAGACGCACAGCACCTCCAGGACCTGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LSIPGSEYPEAV*ERRTAPPGPEQ Trigger: CTGCTCAGGTCCTGGAGGTGCTGTGCGTCTCTCCCACACAGCTTCTGGGTATTCACTGCCCGGGATAGAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100248.6 |
||
| CDS CAA 90 bp | GACACCAGAGTGTTGCCAGTAGAAGTTGTTGAATCCCATGGCTGGTaGACAGGCTGCAGTGCCCAAATTGGCACTGAGGTCCCTCGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: DTRVLPVEVVESHGW*TGCSAQIGTEVPRG Trigger: GCCCCGAGGGACCTCAGTGCCAATTTGGGCACTGCAGCCTGTCAACCAGCCATGGGATTCAACAACTTCTACTGGCAACACTCTGGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018871.8 |
||
| CDS GCA 72 bp | GTAGAAGTTGTTGAATCCCATGGCTGGTTGACAGGCTaGAGTGCCCAAATTGGCACTGAGGTCCCTCGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VEVVESHGWLTG*SAQIGTEVPRG Trigger: GCCCCGAGGGACCTCAGTGCCAATTTGGGCACTGCAGCCTGTCAACCAGCCATGGGATTCAACAACTTCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018871.8 |
||
| CDS CAA 72 bp | GCAGACTCCACCTCCTCTGACCGTGGACCATGGGCTTaGCCTTCACATTACTGGGATGGAACGGAGGACTCA | + |
|
Preference number: 6 (lower is better) Translates to: ADSTSSDRGPWA*PSHYWDGTEDS Trigger: TGAGTCCTCCGTTCCATCCCAGTAATGTGAAGGCAAAGCCCATGGTCCACGGTCAGAGGAGGTGGAGTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106617.8 |
||
| CDS GCA 72 bp | CTAGGTTTTGATGGCTCCAACGGGTACAGCTTACTTTaGTGGCATGGTGGCCTAAGGTGCAGGGTGTGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LGFDGSNGYSLL*WHGGLRCRVCP Trigger: AGGGCACACCCTGCACCTTAGGCCACCATGCCAGCAAAGTAAGCTGTACCCGTTGGAGCCATCAAAACCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018871.8 |
||
| CDS CCA 72 bp | TCCTTGCAGAACCCTTGGTTATACCACGGGCAGTCCTaGAGCTTGAGAACTGGCTTCAAGTGCAGGAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: SLQNPWLYHGQS*SLRTGFKCRNR Trigger: CCTGTTCCTGCACTTGAAGCCAGTTCTCAAGCTCCAGGACTGCCCGTGGTATAACCAAGGGTTCTGCAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS CCA 72 bp | GGCTGGTTGACAGGCTGCAGCTTCACATTACTGGGATaGAACGGAGGACTCATCTTAGGGTGCCCAAATTGG | + |
|
Preference number: 6 (lower is better) Translates to: GWLTGCSFTLLG*NGGLILGCPNW Trigger: CCAATTTGGGCACCCTAAGATGAGTCCTCCGTTCCATCCCAGTAATGTGAAGCTGCAGCCTGTCAACCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100248.6 ENSMUST00000173655.8 |
||
| CDS CAA 72 bp | GCGGTATTTACACAGGGGACCTTCCTTGCAGAACCCTaGGTTATACCACGGGCAGTCCTGGAGCTTGAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: AVFTQGTFLAEP*VIPRAVLELEN Trigger: GTTCTCAAGCTCCAGGACTGCCCGTGGTATAACCAAGGGTTCTGCAAGGAAGGTCCCCTGTGTAAATACCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100248.6 |
||
| CDS GCA 72 bp | CTGGCTTCAAGTGCAGGAACAGGCATTCCTTGTTGCTaGAGTTCCCGAACTTGGAGTGGAAATAGCACACGG | + |
|
Preference number: 6 (lower is better) Translates to: LASSAGTGIPCC*SSRTWSGNSTR Trigger: CCGTGTGCTATTTCCACTCCAAGTTCGGGAACTGCAGCAACAAGGAATGCCTGTTCCTGCACTTGAAGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018871.8 ENSMUST00000100248.6 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS GCA 72 bp | GAACATGGCGGTATTTACACAGGGGACCTACTTCCTTaGAGAACCCTTGGTTATACCACGGGCAGTCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: EHGGIYTGDLLP*RTLGYTTGSPG Trigger: TCCAGGACTGCCCGTGGTATAACCAAGGGTTCTGCAAGGAAGTAGGTCCCCTGTGTAAATACCGCCATGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018871.8 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS GCA 72 bp | GATGAACATGGCGGTATTTACACAGGGGACCTTCCTTaGAGAACCCTTGGTTATACCACGGGCAGTCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: DEHGGIYTGDLP*RTLGYTTGSPG Trigger: TCCAGGACTGCCCGTGGTATAACCAAGGGTTCTGCAAGGAAGGTCCCCTGTGTAAATACCGCCATGTTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100248.6 |
||
| CDS CCA 72 bp | CGGTATTTACACAGGGGACCTTCCTTGCAGAACCCTTaGTTATACCACGGGCAGTCCTGGAGCTTGAGAACT | + |
|
Preference number: 6 (lower is better) Translates to: RYLHRGPSLQNP*LYHGQSWSLRT Trigger: AGTTCTCAAGCTCCAGGACTGCCCGTGGTATAACCAAGGGTTCTGCAAGGAAGGTCCCCTGTGTAAATACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100248.6 |
||
| CDS CAA 72 bp | GGGGCAGAAGCCGGTGAAGTAGTTGGGACACAGTACTaGATGAACATGGCGGTATTTACACAGGGGACCTAC | + |
|
Preference number: 6 (lower is better) Translates to: GAEAGEVVGTQY*MNMAVFTQGTY Trigger: GTAGGTCCCCTGTGTAAATACCGCCATGTTCATCAAGTACTGTGTCCCAACTACTTCACCGGCTTCTGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018871.8 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS CAA 72 bp | GTGTTGCCAGTAGAAGTTGTTGAATCCCATGGCTGGTaGACAGGCTGCAGTGCCCAAATTGGCACTGAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: VLPVEVVESHGW*TGCSAQIGTEV Trigger: GACCTCAGTGCCAATTTGGGCACTGCAGCCTGTCAACCAGCCATGGGATTCAACAACTTCTACTGGCAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018871.8 |
||
| CDS CAA 72 bp | GGGGCAGAAGCCGGTGAAGTAGTTGGGACACAGTACTaGATGAACATGGCGGTATTTACACAGGGGACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GAEAGEVVGTQY*MNMAVFTQGTF Trigger: GAAGGTCCCCTGTGTAAATACCGCCATGTTCATCAAGTACTGTGTCCCAACTACTTCACCGGCTTCTGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100248.6 |
||
| CDS CCA 72 bp | AGAGTGTTGCCAGTAGAAGTTGTTGAATCCCATGGCTaGTTGACAGGCTGCAGTGCCCAAATTGGCACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: RVLPVEVVESHG*LTGCSAQIGTE Trigger: CTCAGTGCCAATTTGGGCACTGCAGCCTGTCAACCAGCCATGGGATTCAACAACTTCTACTGGCAACACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018871.8 |
||
| CDS CAA 72 bp | GTATTTACACAGGGGACCTACTTCCTTGCAGAACCCTaGGTTATACCACGGGCAGTCCTGGAGCTTGAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: VFTQGTYFLAEP*VIPRAVLELEN Trigger: GTTCTCAAGCTCCAGGACTGCCCGTGGTATAACCAAGGGTTCTGCAAGGAAGTAGGTCCCCTGTGTAAATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018871.8 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS CCA 72 bp | TATTTACACAGGGGACCTACTTCCTTGCAGAACCCTTaGTTATACCACGGGCAGTCCTGGAGCTTGAGAACT | + |
|
Preference number: 6 (lower is better) Translates to: YLHRGPTSLQNP*LYHGQSWSLRT Trigger: AGTTCTCAAGCTCCAGGACTGCCCGTGGTATAACCAAGGGTTCTGCAAGGAAGTAGGTCCCCTGTGTAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018871.8 ENSMUST00000106617.8 ENSMUST00000173655.8 |
||
| CDS CCA 72 bp | AGAGTGTTGCCAGTAGAAGTTGTTGAATCCCATGGCTaGTTGACAGGCTGCAGCTTCACATTACTGGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: RVLPVEVVESHG*LTGCSFTLLGW Trigger: CCATCCCAGTAATGTGAAGCTGCAGCCTGTCAACCAGCCATGGGATTCAACAACTTCTACTGGCAACACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100248.6 ENSMUST00000173655.8 |
||