Pregenerated sensors for CPSF3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054309Ensembl transcript IDs: ENSMUST00000067284.10, ENSMUST00000221042.2, ENSMUST00000221145.2, ENSMUST00000221507.2, ENSMUST00000222968.2
Found 202 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCAAGGCTGTCAGTGCACCGGCGTCAGAGCCTCGTACAGTCTCTaGGCGGCCAGTTCCACCATTTCTCGGAGGGATTCATCATCTTCA | + |
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Preference number: 1 (lower is better) Translates to: RQGCQCTGVRASYSL*AASSTISRRDSSSS Trigger: TGAAGATGATGAATCCCTCCGAGAAATGGTGGAACTGGCCGCCCAGAGACTGTACGAGGCTCTGACGCCGGTGCACTGACAGCCTTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
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| 3UTR GCA 90 bp | GGTAAAAGGGCCCGGTGTACGGGATGGCCTGGGTCTGTTTCACAGTaGTCATGGCCAGGTCAGTGTAATTGGAGAGGTCACAGGGAGAGA | + |
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Preference number: 1 (lower is better) Translates to: GKRARCTGWPGSVSQ*SWPGQCNWRGHRER Trigger: TCTCTCCCTGTGACCTCTCCAATTACACTGACCTGGCCATGAGCACTGTGAAACAGACCCAGGCCATCCCGTACACCGGGCCCTTTTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
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| 3UTR CCA 90 bp | TCTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATaGCCTGGGTCTGTTTCACAGTGCTCATGGCCAGGTCAGTGTAAT | + |
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Preference number: 1 (lower is better) Translates to: SGAGSRAGKRARCTG*PGSVSQCSWPGQCN Trigger: ATTACACTGACCTGGCCATGAGCACTGTGAAACAGACCCAGGCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
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| 3UTR GCA 90 bp | AGACCAGAGGAAGACAGACGGAGAGCTGAAGATTTCAGCATACACTaGGGAAAGTGCCTGGAGGCAGACTCAGTGTGGTGCTCAGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: RPEEDRRRAEDFSIH*GKCLEADSVWCSGR Trigger: TCTGCCTGAGCACCACACTGAGTCTGCCTCCAGGCACTTTCCGCAGTGTATGCTGAAATCTTCAGCTCTCCGTCTGTCTTCCTCTGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
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| 3UTR CCA 90 bp | ACTCAGTGTGGTGCTCAGGCAGAAGTGGCTCCCTTGAGGATTAGTTaGAGAATAAAGGACACATCAGTTGGTGGTCCTGCAGTAGTCAAG | + |
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Preference number: 1 (lower is better) Translates to: TQCGAQAEVAPLRIS*RIKDTSVGGPAVVK Trigger: CTTGACTACTGCAGGACCACCAACTGATGTGTCCTTTATTCTCCAACTAATCCTCAAGGGAGCCACTTCTGCCTGAGCACCACACTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
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| 3UTR TCA 90 bp | AATAAAGGACACATCAGTTGGTGGTCCTGCAGTAGTCAAGCCATCTaGTGCAAAAGTAAACAGGCACCCCCGGAGAAACTAAGGTTATTT | + |
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Preference number: 1 (lower is better) Translates to: NKGHISWWSCSSQAI*CKSKQAPPEKLRLF Trigger: AAATAACCTTAGTTTCTCCGGGGGTGCCTGTTTACTTTTGCATCAGATGGCTTGACTACTGCAGGACCACCAACTGATGTGTCCTTTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
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| 3UTR TCA 90 bp | TGCACCACAGTGATGCTTTTGAACACCTTCAGAGCAGGCTTTTCTTaGATTTCTAATTCTTCTACATCACCCGTCAATTTCTGGAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: CTTVMLLNTFRAGFS*ISNSSTSPVNFWSW Trigger: CCAGCTCCAGAAATTGACGGGTGATGTAGAAGAATTAGAAATTCAAGAAAAGCCTGCTCTGAAGGTGTTCAAAAGCATCACTGTGGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
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| 3UTR CAA 90 bp | GCGGCCATGCAGGCCTCACAGGGCACAGCACACTCTCCTGAAACGTaGGTGAGCCCGCTTTACTCCAGAGAGGCACCTGAATGTGGTGAT | + |
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Preference number: 2 (lower is better) Translates to: AAMQASQGTAHSPET*VSPLYSREAPECGD Trigger: ATCACCACATTCAGGTGCCTCTCTGGAGTAAAGCGGGCTCACCAACGTTTCAGGAGAGTGTGCTGTGCCCTGTGAGGCCTGCATGGCCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
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| 3UTR-3UTR GCA 90 bp | GTGCACCGGCGTCAGAGCCTCGTACAGTCTCTGGGCGGCCAGTTCCACCATTTCGGGTCTGTTTCACAGTaGTCATGGCCAGGTCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: VHRRQSLVQSLGGQFHHFGSVSQ*SWPGQC Trigger: ACACTGACCTGGCCATGAGCACTGTGAAACAGACCC...GAAATGGTGGAACTGGCCGCCCAGAGACTGTACGAGGCTCTGACGCCGGTGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGAGTCTGGGAGGCAAGGCTGTCAGTGCACCGGCGTCAGAGCCTCGTACAGTATTCCAGAGACCCGCTaGCCCTGTTCTGGTTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: WESGRQGCQCTGVRASYSIPETR*PCSGFL Trigger: CAAGAAACCAGAACAGGGCCAGCGGGTCTCTGGAAT...ACTGTACGAGGCTCTGACGCCGGTGCACTGACAGCCTTGCCTCCCAGACTCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGGAGGCAAGGCTGTCAGTGCACCGGCGTCAGAGCCTCGTACAGTCTCTGGGCCAGGTCAGTGTAATTaGAGAGGTCACAGGGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: LGGKAVSAPASEPRTVSGPGQCN*RGHRER Trigger: TCTCTCCCTGTGACCTCTCCAATTACACTGACCTGG...CCCAGAGACTGTACGAGGCTCTGACGCCGGTGCACTGACAGCCTTGCCTCCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCACCGGCGTCAGAGCCTCGTACAGTCTCTGGGCGGCCAGTTCCACCATTTCCTTCCAATATCACGGTaGTCACTGTGTCTGCATACA | + |
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Preference number: 2 (lower is better) Translates to: VHRRQSLVQSLGGQFHHFLPISR*SLCLHT Trigger: TGTATGCAGACACAGTGACCACCGTGATATTGGAAG...GAAATGGTGGAACTGGCCGCCCAGAGACTGTACGAGGCTCTGACGCCGGTGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
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| 3UTR-3UTR GCA 90 bp | GCGTCAGAGCCTCGTACAGTCTCTGGGCGGCCAGTTCCACCATTTCTCGGAGGGAGAGACCTTCTGTACTaGACCTTTCCTTATCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: ASEPRTVSGRPVPPFLGGRDLLY*TFPYLW Trigger: CCAAAGATAAGGAAAGGTGCAGTACAGAAGGTCTCT...CCCTCCGAGAAATGGTGGAACTGGCCGCCCAGAGACTGTACGAGGCTCTGACGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
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| 3UTR-3UTR TCA 90 bp | CGTCAGAGCCTCGTACAGTCTCTGGGCGGCCAGTTCCACCATTTCTCGGAGGGAAGTCATCTTTCACACTaGCACAGTCTTCTCCAAATA | + |
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Preference number: 2 (lower is better) Translates to: RQSLVQSLGGQFHHFSEGSHLSH*HSLLQI Trigger: TATTTGGAGAAGACTGTGTCAGTGTGAAAGATGACT...TCCCTCCGAGAAATGGTGGAACTGGCCGCCCAGAGACTGTACGAGGCTCTGACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
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| 3UTR-3UTR CCA 90 bp | CATTCAACTCAAAACTCAGATTTGCCAGTACAGACCAGAGGAAGACAGACGGAGGAGGCAGACTCAGTGTaGTGCTCAGGCAGAAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: HSTQNSDLPVQTRGRQTEEADSV*CSGRSG Trigger: GCCACTTCTGCCTGAGCACCACACTGAGTCTGCCTC...CTCCGTCTGTCTTCCTCTGGTCTGTACTGGCAAATCTGAGTTTTGAGTTGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
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| 3UTR-3UTR CCA 90 bp | CAGATTTGCCAGTACAGACCAGAGGAAGACAGACGGAGAGCTGAAGATTTCAGCAAAGGACACATCAGTTaGTGGTCCTGCAGTAGTCAA | + |
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Preference number: 2 (lower is better) Translates to: QICQYRPEEDRRRAEDFSKGHIS*WSCSSQ Trigger: TTGACTACTGCAGGACCACCAACTGATGTGTCCTTT...GCTGAAATCTTCAGCTCTCCGTCTGTCTTCCTCTGGTCTGTACTGGCAAATCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
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| 3UTR-3UTR TCA 90 bp | TTCTGGTTTCTTGTCTGCCAAAAAGCCCATGACCTAGTGAAAACAGAAGAGAGGAGTGTATCACTTATGTaGTGGGGAAGAGCACTTCTG | + |
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Preference number: 2 (lower is better) Translates to: FWFLVCQKAHDLVKTEERSVSLM*WGRALL Trigger: CAGAAGTGCTCTTCCCCATCACATAAGTGATACACT...CCTCTCTTCTGTTTTCACTAGGTCATGGGCTTTTTGGCAGACAAGAAACCAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGATTTGACTGAACTTCCAATATCACGGTGGTCACTGTGTCTGCATACATGTCTGCCAAAAAGCCCATaGCCTAGTGAAAACAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: LDLTELPISRWSLCLHTCLPKSP*PSENRR Trigger: TCTTCTGTTTTCACTAGGTCATGGGCTTTTTGGCAG...ACATGTATGCAGACACAGTGACCACCGTGATATTGGAAGTTCAGTCAAATCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
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| 3UTR CCA 72 bp | TCTGTCTGCCCTAGTGTAGATGTGCATGAGCAGCTGTaGGGACGGCGGCCATGCAGGCCTCACAGGGCACAG | + |
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Preference number: 3 (lower is better) Translates to: SVCPSVDVHEQL*GRRPCRPHRAQ Trigger: CTGTGCCCTGTGAGGCCTGCATGGCCGCCGTCCCCACAGCTGCTCATGCACATCTACACTAGGGCAGACAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
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| 3UTR GCA 72 bp | CGCCAAGCAGTGAGCCCCCAGGGACAAAGCTCTGTCTaGCCTAGTGTAGATGTGCATGAGCAGCTGTGGGGA | + |
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Preference number: 3 (lower is better) Translates to: RQAVSPQGQSSV*PSVDVHEQLWG Trigger: TCCCCACAGCTGCTCATGCACATCTACACTAGGGCAGACAGAGCTTTGTCCCTGGGGGCTCACTGCTTGGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
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| 3UTR CCA 72 bp | TGTCAGTGCACCGGCGTCAGAGCCTCGTACAGTCTCTaGGCGGCCAGTTCCACCATTTCTCGGAGGGATTCA | + |
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Preference number: 3 (lower is better) Translates to: CQCTGVRASYSL*AASSTISRRDS Trigger: TGAATCCCTCCGAGAAATGGTGGAACTGGCCGCCCAGAGACTGTACGAGGCTCTGACGCCGGTGCACTGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGGAGGCAAGGCTGTCAGTGCACCGGCGTCAGAGCCTCGTACAGTCTCTGGGAATGCTTTAAAAAGTTaGAGCCGGGTGTGGTGGCGA | + |
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Preference number: 3 (lower is better) Translates to: LGGKAVSAPASEPRTVSGNALKS*SRVWWR Trigger: TCGCCACCACACCCGGCTCAAACTTTTTAAAGCATT...CCCAGAGACTGTACGAGGCTCTGACGCCGGTGCACTGACAGCCTTGCCTCCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
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| 3UTR GCA 72 bp | GCCCGGTGTACGGGATGGCCTGGGTCTGTTTCACAGTaGTCATGGCCAGGTCAGTGTAATTGGAGAGGTCAC | + |
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Preference number: 3 (lower is better) Translates to: ARCTGWPGSVSQ*SWPGQCNWRGH Trigger: GTGACCTCTCCAATTACACTGACCTGGCCATGAGCACTGTGAAACAGACCCAGGCCATCCCGTACACCGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
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| 3UTR CCA 72 bp | GGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATaGCCTGGGTCTGTTTCACAGTGCTCATGGCCAGGT | + |
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Preference number: 3 (lower is better) Translates to: GSRAGKRARCTG*PGSVSQCSWPG Trigger: ACCTGGCCATGAGCACTGTGAAACAGACCCAGGCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
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| 3UTR TCA 72 bp | CCTCACAGGGCACAGCACACTCTCCTGAAACGTTGGTaGGCCCGCTTTACTCCAGAGAGGCACCTGAATGTG | + |
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Preference number: 3 (lower is better) Translates to: PHRAQHTLLKRW*ARFTPERHLNV Trigger: CACATTCAGGTGCCTCTCTGGAGTAAAGCGGGCTCACCAACGTTTCAGGAGAGTGTGCTGTGCCCTGTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
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| 3UTR GCA 72 bp | TTCGCCAGCCACTCCAGAACCACCATGCCCGGCTCCTaGACCACAGTGATGCTTTTGAACACCTTCAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: FASHSRTTMPGS*TTVMLLNTFRA Trigger: TGCTCTGAAGGTGTTCAAAAGCATCACTGTGGTGCAGGAGCCGGGCATGGTGGTTCTGGAGTGGCTGGCGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
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| 3UTR GCA 72 bp | CGGAGAGCTGAAGATTTCAGCATACACTGCGGAAAGTaGCTGGAGGCAGACTCAGTGTGGTGCTCAGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: RRAEDFSIHCGK*LEADSVWCSGR Trigger: TCTGCCTGAGCACCACACTGAGTCTGCCTCCAGGCACTTTCCGCAGTGTATGCTGAAATCTTCAGCTCTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
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| 3UTR TCA 72 bp | ACAATCCTCACATGGAATTTTCTCCACGCCAAGCAGTaGGCCCCCAGGGACAAAGCTCTGTCTGCCCTAGTG | + |
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Preference number: 3 (lower is better) Translates to: TILTWNFLHAKQ*APRDKALSALV Trigger: CACTAGGGCAGACAGAGCTTTGTCCCTGGGGGCTCACTGCTTGGCGTGGAGAAAATTCCATGTGAGGATTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
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| 3UTR GCA 72 bp | GAAGACAGACGGAGAGCTGAAGATTTCAGCATACACTaGGGAAAGTGCCTGGAGGCAGACTCAGTGTGGTGC | + |
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Preference number: 3 (lower is better) Translates to: EDRRRAEDFSIH*GKCLEADSVWC Trigger: GCACCACACTGAGTCTGCCTCCAGGCACTTTCCGCAGTGTATGCTGAAATCTTCAGCTCTCCGTCTGTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
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| 3UTR TCA 72 bp | GGAGTGTATCACTTATGTGATGGGGAAGAGCACTTCTaGACTCCCAGTTCGCAGGTGCCACCATGTCTAGCT | + |
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Preference number: 3 (lower is better) Translates to: GVYHLCDGEEHF*TPSSQVPPCLA Trigger: AGCTAGACATGGTGGCACCTGCGAACTGGGAGTTCAGAAGTGCTCTTCCCCATCACATAAGTGATACACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
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| 3UTR CCA 72 bp | GGTGCTCAGGCAGAAGTGGCTCCCTTGAGGATTAGTTaGAGAATAAAGGACACATCAGTTGGTGGTCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: GAQAEVAPLRIS*RIKDTSVGGPA Trigger: TGCAGGACCACCAACTGATGTGTCCTTTATTCTCCAACTAATCCTCAAGGGAGCCACTTCTGCCTGAGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
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| 3UTR CCA 72 bp | TTAAAGTTTCTTTTAACAAGAATTCCAGAGACCCGCTaGCCCTGTTCTGGTTTCTTGTCTGCCAAAAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: LKFLLTRIPETR*PCSGFLSAKKP Trigger: GGGCTTTTTGGCAGACAAGAAACCAGAACAGGGCCAGCGGGTCTCTGGAATTCTTGTTAAAAGAAACTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
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| CDS-3UTR TCA 90 bp | GTGCACCGGCGTCAGAGCCTCGTACAGTCTCTGGGCGGCCAGTTCCACCATTTCCTCTGCCCCCTCTGTTaGCAATGTCGTGCACAGTGT | + |
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Preference number: 4 (lower is better) Translates to: VHRRQSLVQSLGGQFHHFLCPLC*QCRAQC Trigger: ACACTGTGCACGACATTGTCAACAGAGGGGGCAGAG...GAAATGGTGGAACTGGCCGCCCAGAGACTGTACGAGGCTCTGACGCCGGTGCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
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| CDS-3UTR TCA 90 bp | GCGTCAGAGCCTCGTACAGTCTCTGGGCGGCCAGTTCCACCATTTCTCGGAGGGATCAGGAGCAGCTCCTaGGCTCTTCCGAGAGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: ASEPRTVSGRPVPPFLGGIRSSS*ALPRAK Trigger: CTTTGCTCTCGGAAGAGCTCAGGAGCTGCTCCTGAT...CCCTCCGAGAAATGGTGGAACTGGCCGCCCAGAGACTGTACGAGGCTCTGACGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
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| CDS-3UTR GCA 90 bp | AGTGCCTGGAGGCAGACTCAGTGTGGTGCTCAGGCAGAAGTGGCTCCCTTGAGGGATCTTCCCACTTCTTaGCCAGCACCAAGGGGTCGG | + |
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Preference number: 4 (lower is better) Translates to: SAWRQTQCGAQAEVAPLRDLPTS*PAPRGR Trigger: CCGACCCCTTGGTGCTGGGCAAGAAGTGGGAAGATC...CCTCAAGGGAGCCACTTCTGCCTGAGCACCACACTGAGTCTGCCTCCAGGCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
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| CDS-3UTR CCA 90 bp | CTGGGAGGCAAGGCTGTCAGTGCACCGGCGTCAGAGCCTCGTACAGTCTCTGGGTCATGCAGCTCCGGGTaGTTCTGCCAGTACTCATCT | + |
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Preference number: 4 (lower is better) Translates to: LGGKAVSAPASEPRTVSGSCSSG*FCQYSS Trigger: AGATGAGTACTGGCAGAACCACCCGGAGCTGCATGA...CCCAGAGACTGTACGAGGCTCTGACGCCGGTGCACTGACAGCCTTGCCTCCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
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| CDS-3UTR GCA 90 bp | AGTGCCTGGAGGCAGACTCAGTGTGGTGCTCAGGCAGAAGTGGCTCCCTTGAGGTATCATAAACATGGCTaGTCCCAGGACGTGGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: SAWRQTQCGAQAEVAPLRYHKHG*SQDVAG Trigger: GCCGGCCACGTCCTGGGAGCAGCCATGTTTATGATA...CCTCAAGGGAGCCACTTCTGCCTGAGCACCACACTGAGTCTGCCTCCAGGCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
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| CDS-3UTR GCA 90 bp | GGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCCTGGGTCTTATCATAAACATGGCTaGTCCCAGGACGTGGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: GAGSRAGKRARCTGWPGSYHKHG*SQDVAG Trigger: GCCGGCCACGTCCTGGGAGCAGCCATGTTTATGATA...AGACCCAGGCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221042.2 ENSMUST00000222968.2 |
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| CDS-3UTR GCA 90 bp | GGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCCTGGGTCTTCTGGTACACGGCCATaGACTTCTTGGCCAGAGACG | + |
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Preference number: 4 (lower is better) Translates to: GAGSRAGKRARCTGWPGSSGTRP*TSWPET Trigger: CGTCTCTGGCCAAGAAGTGCATGGCCGTGTACCAGA...AGACCCAGGCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
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| CDS-3UTR CCA 90 bp | GGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCCTGGGTCTCGGCCATGCACTTCTTaGCCAGAGACGATGCGTAGT | + |
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Preference number: 4 (lower is better) Translates to: GAGSRAGKRARCTGWPGSRPCTS*PETMRS Trigger: ACTACGCATCGTCTCTGGCCAAGAAGTGCATGGCCG...AGACCCAGGCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
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| CDS-3UTR TCA 90 bp | TTTCTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCCTGGAGCAAAGACAGGAATaGGCCCTCTGCCCCCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: FLELVVEQVKGPGVRDGLEQRQE*ALCPLC Trigger: ACAGAGGGGGCAGAGGGCTCATTCCTGTCTTTGCTC...CAGGCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000221042.2 ENSMUST00000222968.2 |
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| CDS-3UTR GCA 90 bp | CGGAAAGTGCCTGGAGGCAGACTCAGTGTGGTGCTCAGGCAGAAGTGGCTCCCTGGGTCTGTTTCACAGTaGTCATGGCCAGGTCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: RKVPGGRLSVVLRQKWLPGSVSQ*SWPGQC Trigger: ACACTGACCTGGCCATGAGCACTGTGAAACAGACCC...AGGGAGCCACTTCTGCCTGAGCACCACACTGAGTCTGCCTCCAGGCACTTTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
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| 3UTR CAA 72 bp | CAGGCCTCACAGGGCACAGCACACTCTCCTGAAACGTaGGTGAGCCCGCTTTACTCCAGAGAGGCACCTGAA | + |
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Preference number: 4 (lower is better) Translates to: QASQGTAHSPET*VSPLYSREAPE Trigger: TTCAGGTGCCTCTCTGGAGTAAAGCGGGCTCACCAACGTTTCAGGAGAGTGTGCTGTGCCCTGTGAGGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
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| CDS-3UTR TCA 90 bp | GGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCCTGGGTCTTTGAAACTTGTCTTCTaGAGGAACCAGGGCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: GAGSRAGKRARCTGWPGSLKLVF*RNQGRA Trigger: AGCCCTGCCCTGGTTCCTTCAGAAGACAAGTTTCAA...AGACCCAGGCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221042.2 ENSMUST00000222968.2 |
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| CDS-3UTR GCA 90 bp | CGTCAGAGCCTCGTACAGTCTCTGGGCGGCCAGTTCCACCATTTCTCGGAGGGAAGCTCCGGGTGGTTCTaGCAGTACTCATCTAGAATC | + |
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Preference number: 4 (lower is better) Translates to: RQSLVQSLGGQFHHFSEGSSGWF*QYSSRI Trigger: GATTCTAGATGAGTACTGGCAGAACCACCCGGAGCT...TCCCTCCGAGAAATGGTGGAACTGGCCGCCCAGAGACTGTACGAGGCTCTGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
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| CDS-3UTR CCA 90 bp | TCAATTTCTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGGGTCGGATCAGCAGCTaGTCGCTCTCCTCTGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: SISGAGSRAGKRARCTGWGRISS*SLSSAG Trigger: TCCTGCAGAGGAGAGCGACCAGCTGCTGATCCGACC...CCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAGAAATTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
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| CDS-3UTR CCA 90 bp | CTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCCTGGGTCCGCTGGCCCTGTTCTaGTTTCTTGTCTGCCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: LELVVEQVKGPGVRDGLGPLALF*FLVCQK Trigger: TTTTTGGCAGACAAGAAACCAGAACAGGGCCAGCGG...ACCCAGGCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
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| CDS-3UTR TCA 90 bp | CTGGGAGGCAAGGCTGTCAGTGCACCGGCGTCAGAGCCTCGTACAGTCTCTGGGCCAAATGGAAATGACTaGTCAACAGAAGGTCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LGGKAVSAPASEPRTVSGPNGND*STEGRS Trigger: AGATCGACCTTCTGTTGATCAGTCATTTCCATTTGG...CCCAGAGACTGTACGAGGCTCTGACGCCGGTGCACTGACAGCCTTGCCTCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
||
| CDS-3UTR TCA 90 bp | CAATTTCTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCCGAGCTTCTCTCCCCTaGAGTTTAAGGTCACGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QFLELVVEQVKGPGVRDGRASLP*SLRSRP Trigger: AGGCCGTGACCTTAAACTTCAGGGGAGAGAAGCTCG...GCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAGAAATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
||
| CDS-3UTR GCA 90 bp | TCAATTTCTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGGATCTTCCCACTTCTTaGCCAGCACCAAGGGGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SISGAGSRAGKRARCTGWDLPTS*PAPRGR Trigger: CCGACCCCTTGGTGCTGGGCAAGAAGTGGGAAGATC...CCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAGAAATTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
||
| CDS-3UTR GCA 90 bp | CTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCCTGGGTTGTCGTGCACAGTGTTaGAGAATCTTGCTTCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LELVVEQVKGPGVRDGLGCRAQC*RILLLA Trigger: AGCGAGAAGCAAGATTCTGCAACACTGTGCACGACA...ACCCAGGCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221042.2 ENSMUST00000222968.2 |
||
| CDS-3UTR GCA 90 bp | GTAGATGTGCATGAGCAGCTGTGGGGACGGCGGCCATGCAGGCCTCACAGGGCACTGTTGACAATGTCGTaGACAGTGTTGCAGAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VDVHEQLWGRRPCRPHRALLTMS*TVLQNL Trigger: AAGATTCTGCAACACTGTGCACGACATTGTCAACAG...TGCCCTGTGAGGCCTGCATGGCCGCCGTCCCCACAGCTGCTCATGCACATCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCCTGGGTCTAGGCCATCACAACACTaGGGCCAATGTCATCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GAGSRAGKRARCTGWPGSRPSQH*GQCHQS Trigger: ACTTTGATGACATTGGCCCCAGTGTTGTGATGGCCT...AGACCCAGGCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCCTGGCGCTGCTTTCAGCCTaGCCATTTCATTCTGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FLELVVEQVKGPGVRDGLALLSA*PFHSVP Trigger: GGGAACAGAATGAAATGGCCAGGCTGAAAGCAGCGC...CAGGCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCCTGATTCCAGAGACCCGCTaGCCCTGTTCTGGTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FLELVVEQVKGPGVRDGLIPETR*PCSGFL Trigger: CAAGAAACCAGAACAGGGCCAGCGGGTCTCTGGAAT...CAGGCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
||
| CDS-3UTR TCA 90 bp | TCAATTTCTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGATCAGGAGCAGCTCCTaGGCTCTTCCGAGAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SISGAGSRAGKRARCTGWIRSSS*ALPRAK Trigger: CTTTGCTCTCGGAAGAGCTCAGGAGCTGCTCCTGAT...CCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAGAAATTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221042.2 ENSMUST00000222968.2 |
||
| CDS-3UTR TCA 90 bp | CAATTTCTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCTTGAATCATGCCTGGTaGGGCCATCACAACACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QFLELVVEQVKGPGVRDGLNHAW*GHHNTG Trigger: CCCAGTGTTGTGATGGCCTCACCAGGCATGATTCAA...GCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAGAAATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
||
| CDS-3UTR TCA 90 bp | CAATTTCTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCCTGGATAAGCCGTTTTaGATCATGCCTGGTGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QFLELVVEQVKGPGVRDGLDKPF*IMPGEA Trigger: GGCCTCACCAGGCATGATTCAAAACGGCTTATCCAG...GCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAGAAATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
||
| CDS-3UTR GCA 90 bp | GTAGATGTGCATGAGCAGCTGTGGGGACGGCGGCCATGCAGGCCTCACAGGGCACCAGAACTTGATTCCTaGAACTTCCTTAACTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: VDVHEQLWGRRPCRPHRAPELDS*NFLNFM Trigger: CATGAAGTTAAGGAAGTTGCAGGAATCAAGTTCTGG...TGCCCTGTGAGGCCTGCATGGCCGCCGTCCCCACAGCTGCTCATGCACATCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
||
| CDS-3UTR GCA 90 bp | TCAATTTCTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGTATCATAAACATGGCTaGTCCCAGGACGTGGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SISGAGSRAGKRARCTGWYHKHG*SQDVAG Trigger: GCCGGCCACGTCCTGGGAGCAGCCATGTTTATGATA...CCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAGAAATTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221042.2 ENSMUST00000222968.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCCTGGGTTCAGACATGATGTaGTTGGCAAGTGTCCCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: FLELVVEQVKGPGVRDGLGSDMM*LASVPS Trigger: CGAAGGGACACTTGCCAAGCACATCATGTCTGAACC...CAGGCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCCTGGGTCTATAGCTTTTGTGGCGTaGGTCATAAATGTCCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GAGSRAGKRARCTGWPGSIAFVA*VINVRP Trigger: AGGACGGACATTTATGACCCACGCCACAAAAGCTAT...AGACCCAGGCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000221042.2 ENSMUST00000222968.2 |
||
| CDS-3UTR CCA 90 bp | AGTGCCTGGAGGCAGACTCAGTGTGGTGCTCAGGCAGAAGTGGCTCCCTTGAGGCTTCCAATATCACGGTaGTCACTGTGTCTGCATACA | + |
|
Preference number: 4 (lower is better) Translates to: SAWRQTQCGAQAEVAPLRLPISR*SLCLHT Trigger: TGTATGCAGACACAGTGACCACCGTGATATTGGAAG...CCTCAAGGGAGCCACTTCTGCCTGAGCACCACACTGAGTCTGCCTCCAGGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR TCA 90 bp | AGTGCCTGGAGGCAGACTCAGTGTGGTGCTCAGGCAGAAGTGGCTCCCTTGAGGCCAAATGGAAATGACTaGTCAACAGAAGGTCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: SAWRQTQCGAQAEVAPLRPNGND*STEGRS Trigger: AGATCGACCTTCTGTTGATCAGTCATTTCCATTTGG...CCTCAAGGGAGCCACTTCTGCCTGAGCACCACACTGAGTCTGCCTCCAGGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR GCA 90 bp | CAATTTCTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCAGCTCCGGGTGGTTCTaGCAGTACTCATCTAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: QFLELVVEQVKGPGVRDGSSGWF*QYSSRI Trigger: GATTCTAGATGAGTACTGGCAGAACCACCCGGAGCT...GCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAGAAATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221042.2 ENSMUST00000222968.2 |
||
| CDS-3UTR CCA 90 bp | TCAATTTCTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGTCATGCAGCTCCGGGTaGTTCTGCCAGTACTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SISGAGSRAGKRARCTGWSCSSG*FCQYSS Trigger: AGATGAGTACTGGCAGAACCACCCGGAGCTGCATGA...CCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAGAAATTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221042.2 ENSMUST00000222968.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCCTGGGTCTAACCGACATTTTCAGTaGCAACTTCTGTCCAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: GAGSRAGKRARCTGWPGSNRHFQ*QLLSRH Trigger: ATGTCTGGACAGAAGTTGCCACTGAAAATGTCGGTT...AGACCCAGGCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
||
| CDS-3UTR CCA 90 bp | TGCCAGTACAGACCAGAGGAAGACAGACGGAGAGCTGAAGATTTCAGCATACACGCCTCGTACAGTCTCTaGGCGGCCAGTTCCACCATT | + |
|
Preference number: 4 (lower is better) Translates to: CQYRPEEDRRRAEDFSIHASYSL*AASSTI Trigger: AATGGTGGAACTGGCCGCCCAGAGACTGTACGAGGC...GTGTATGCTGAAATCTTCAGCTCTCCGTCTGTCTTCCTCTGGTCTGTACTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR TCA 90 bp | ACCGGCGTCAGAGCCTCGTACAGTCTCTGGGCGGCCAGTTCCACCATTTCTCGGGACTTTGACATAGTCTaGGAGAAGCCATCTATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TGVRASYSLWAASSTISRDFDIV*EKPSIN Trigger: ATTTATAGATGGCTTCTCTCAGACTATGTCAAAGTC...CCGAGAAATGGTGGAACTGGCCGCCCAGAGACTGTACGAGGCTCTGACGCCGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
||
| CDS-3UTR TCA 90 bp | CAATTTCTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCGTCCAGACATGGTCGTaGTTTCTTCAGGTTCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: QFLELVVEQVKGPGVRDGVQTWS*FLQVQT Trigger: TGTCTGAACCTGAAGAAATCACGACCATGTCTGGAC...GCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAGAAATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
||
| CDS-3UTR GCA 90 bp | CAGATTTGCCAGTACAGACCAGAGGAAGACAGACGGAGAGCTGAAGATTTCAGCTCTGGTACACGGCCATaGACTTCTTGGCCAGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: QICQYRPEEDRRRAEDFSSGTRP*TSWPET Trigger: CGTCTCTGGCCAAGAAGTGCATGGCCGTGTACCAGA...GCTGAAATCTTCAGCTCTCCGTCTGTCTTCCTCTGGTCTGTACTGGCAAATCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR CCA 90 bp | CATTCAACTCAAAACTCAGATTTGCCAGTACAGACCAGAGGAAGACAGACGGAGGGTCGGATCAGCAGCTaGTCGCTCTCCTCTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HSTQNSDLPVQTRGRQTEGRISS*SLSSAG Trigger: TCCTGCAGAGGAGAGCGACCAGCTGCTGATCCGACC...CTCCGTCTGTCTTCCTCTGGTCTGTACTGGCAAATCTGAGTTTTGAGTTGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR CCA 90 bp | TGCCAGTACAGACCAGAGGAAGACAGACGGAGAGCTGAAGATTTCAGCATACACCGGCCATGCACTTCTTaGCCAGAGACGATGCGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: CQYRPEEDRRRAEDFSIHRPCTS*PETMRS Trigger: ACTACGCATCGTCTCTGGCCAAGAAGTGCATGGCCG...GTGTATGCTGAAATCTTCAGCTCTCCGTCTGTCTTCCTCTGGTCTGTACTGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR CCA 90 bp | CACACTGACACAGTCTTCTCCAAATATGTCCTGGAGCATGACCTCCAGCCTCTTGGAGGCAGAGGCAGGTaGATTTCTGAGTTTGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HTDTVFSKYVLEHDLQPLGGRGR*ISEFEA Trigger: GGCCTCAAACTCAGAAATCCACCTGCCTCTGCCTCC...AAGAGGCTGGAGGTCATGCTCCAGGACATATTTGGAGAAGACTGTGTCAGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
||
| CDS-3UTR TCA 90 bp | CTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCCTGGGTGACTTTGACATAGTCTaGGAGAAGCCATCTATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LELVVEQVKGPGVRDGLGDFDIV*EKPSIN Trigger: ATTTATAGATGGCTTCTCTCAGACTATGTCAAAGTC...ACCCAGGCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221042.2 ENSMUST00000222968.2 |
||
| CDS-3UTR TCA 90 bp | CGGAAAGTGCCTGGAGGCAGACTCAGTGTGGTGCTCAGGCAGAAGTGGCTCCCTTCTGTCTTCTTGTCTTaGGAAATCACCTGTATACAA | + |
|
Preference number: 4 (lower is better) Translates to: RKVPGGRLSVVLRQKWLPSVFLS*EITCIQ Trigger: TTGTATACAGGTGATTTCTCAAGACAAGAAGACAGA...AGGGAGCCACTTCTGCCTGAGCACCACACTGAGTCTGCCTCCAGGCACTTTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR TCA 90 bp | CTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCCTGGGTTCTGTCTTCTTGTCTTaGGAAATCACCTGTATACAA | + |
|
Preference number: 4 (lower is better) Translates to: LELVVEQVKGPGVRDGLGSVFLS*EITCIQ Trigger: TTGTATACAGGTGATTTCTCAAGACAAGAAGACAGA...ACCCAGGCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221042.2 ENSMUST00000222968.2 |
||
| CDS-3UTR TCA 90 bp | AGATTTGCCAGTACAGACCAGAGGAAGACAGACGGAGAGCTGAAGATTTCAGCAATCAGGAGCAGCTCCTaGGCTCTTCCGAGAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RFASTDQRKTDGELKISAIRSSS*ALPRAK Trigger: CTTTGCTCTCGGAAGAGCTCAGGAGCTGCTCCTGAT...TGCTGAAATCTTCAGCTCTCCGTCTGTCTTCCTCTGGTCTGTACTGGCAAATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR GCA 90 bp | CAATTTCTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCAGTGTTGCAGAATCTTaGTTCTCGCTCTTCACGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QFLELVVEQVKGPGVRDGSVAES*FSLFTL Trigger: AAGCGTGAAGAGCGAGAAGCAAGATTCTGCAACACT...GCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAGAAATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221042.2 ENSMUST00000222968.2 |
||
| CDS-3UTR GCA 90 bp | GCCTGGAGGCAGACTCAGTGTGGTGCTCAGGCAGAAGTGGCTCCCTTGAGGATTCTCCAGATTAATATTTaGTGTTTTCCCGTCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: AWRQTQCGAQAEVAPLRILQINI*CFPVHC Trigger: ACAGTGGACGGGAAAACAGCAAATATTAATCTGGAG...AATCCTCAAGGGAGCCACTTCTGCCTGAGCACCACACTGAGTCTGCCTCCAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR CCA 90 bp | CTGGGCGGCCAGTTCCACCATTTCTCGGAGGGATTCATCATCTTCACTTCCTTCCGCTTCTCATGGATATaGGTCCCATACGTAGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGGQFHHFSEGFIIFTSFRFSWI*VPYVDS Trigger: TGAGTCTACGTATGGGACCCATATCCATGAGAAGCG...GAAGGAAGTGAAGATGATGAATCCCTCCGAGAAATGGTGGAACTGGCCGCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
||
| CDS-3UTR CCA 90 bp | CAATTTCTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCTCTTCACGCTTCTCATaGATATGGGTCCCATACGTA | + |
|
Preference number: 4 (lower is better) Translates to: QFLELVVEQVKGPGVRDGSSRFS*IWVPYV Trigger: TACGTATGGGACCCATATCCATGAGAAGCGTGAAGA...GCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAGAAATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221042.2 ENSMUST00000222968.2 |
||
| CDS-3UTR CCA 90 bp | TGCCAGTACAGACCAGAGGAAGACAGACGGAGAGCTGAAGATTTCAGCATACACATTCCAGAGACCCGCTaGCCCTGTTCTGGTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CQYRPEEDRRRAEDFSIHIPETR*PCSGFL Trigger: CAAGAAACCAGAACAGGGCCAGCGGGTCTCTGGAAT...GTGTATGCTGAAATCTTCAGCTCTCCGTCTGTCTTCCTCTGGTCTGTACTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR CCA 90 bp | AGATTTGCCAGTACAGACCAGAGGAAGACAGACGGAGAGCTGAAGATTTCAGCAGTGTACGGGATGGCCTaGGTCTGTTTCACAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RFASTDQRKTDGELKISAVYGMA*VCFTVL Trigger: GAGCACTGTGAAACAGACCCAGGCCATCCCGTACAC...TGCTGAAATCTTCAGCTCTCCGTCTGTCTTCCTCTGGTCTGTACTGGCAAATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR TCA 90 bp | CAATTTCTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCCCAAATGGAAATGACTaGTCAACAGAAGGTCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: QFLELVVEQVKGPGVRDGPNGND*STEGRS Trigger: AGATCGACCTTCTGTTGATCAGTCATTTCCATTTGG...GCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAGAAATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221042.2 ENSMUST00000222968.2 |
||
| CDS-3UTR TCA 90 bp | CAGATTTGCCAGTACAGACCAGAGGAAGACAGACGGAGAGCTGAAGATTTCAGCTTGAAACTTGTCTTCTaGAGGAACCAGGGCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QICQYRPEEDRRRAEDFSLKLVF*RNQGRA Trigger: AGCCCTGCCCTGGTTCCTTCAGAAGACAAGTTTCAA...GCTGAAATCTTCAGCTCTCCGTCTGTCTTCCTCTGGTCTGTACTGGCAAATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR TCA 90 bp | AGAATAAAGGACACATCAGTTGGTGGTCCTGCAGTAGTCAAGCCATCTGATGCACTCTGCCCCCTCTGTTaGCAATGTCGTGCACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RIKDTSVGGPAVVKPSDALCPLC*QCRAQC Trigger: ACACTGTGCACGACATTGTCAACAGAGGGGGCAGAG...TGCATCAGATGGCTTGACTACTGCAGGACCACCAACTGATGTGTCCTTTATTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR TCA 90 bp | TTGAGGATTAGTTGGAGAATAAAGGACACATCAGTTGGTGGTCCTGCAGTAGTCGAGCAAAGACAGGAATaGGCCCTCTGCCCCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LRISWRIKDTSVGGPAVVEQRQE*ALCPLC Trigger: ACAGAGGGGGCAGAGGGCTCATTCCTGTCTTTGCTC...GACTACTGCAGGACCACCAACTGATGTGTCCTTTATTCTCCAACTAATCCTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR TCA 90 bp | TCAATTTCTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCCAATGTCATCAAAGTaGTCCATGCTCTTGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SISGAGSRAGKRARCTGWPMSSK*SMLLRL Trigger: CAACCTCAAGAGCATGGATCACTTTGATGACATTGG...CCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAGAAATTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
||
| CDS-3UTR TCA 90 bp | TGCCAGTACAGACCAGAGGAAGACAGACGGAGAGCTGAAGATTTCAGCATACACCTTCAGGTTCAGACATaGTGTGCTTGGCAAGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CQYRPEEDRRRAEDFSIHLQVQT*CAWQVS Trigger: GGACACTTGCCAAGCACATCATGTCTGAACCTGAAG...GTGTATGCTGAAATCTTCAGCTCTCCGTCTGTCTTCCTCTGGTCTGTACTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR TCA 90 bp | CATTCAACTCAAAACTCAGATTTGCCAGTACAGACCAGAGGAAGACAGACGGAGCGAGCTTCTCTCCCCTaGAGTTTAAGGTCACGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HSTQNSDLPVQTRGRQTERASLP*SLRSRP Trigger: AGGCCGTGACCTTAAACTTCAGGGGAGAGAAGCTCG...CTCCGTCTGTCTTCCTCTGGTCTGTACTGGCAAATCTGAGTTTTGAGTTGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR GCA 90 bp | CTGGGCGGCCAGTTCCACCATTTCTCGGAGGGATTCATCATCTTCACTTCCTTCAGTGTTGCAGAATCTTaGTTCTCGCTCTTCACGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGGQFHHFSEGFIIFTSFSVAES*FSLFTL Trigger: AAGCGTGAAGAGCGAGAAGCAAGATTCTGCAACACT...GAAGGAAGTGAAGATGATGAATCCCTCCGAGAAATGGTGGAACTGGCCGCCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
||
| CDS-3UTR GCA 90 bp | CAATTTCTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCTTGAGGTTGCTGATGTaGTTGAAAACAAAGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QFLELVVEQVKGPGVRDGLRLLM*LKTKGL Trigger: CAACCCCTTTGTTTTCAAGCACATCAGCAACCTCAA...GCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAGAAATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
||
| CDS-3UTR CCA 90 bp | AGATTTGCCAGTACAGACCAGAGGAAGACAGACGGAGAGCTGAAGATTTCAGCATCATGCAGCTCCGGGTaGTTCTGCCAGTACTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: RFASTDQRKTDGELKISASCSSG*FCQYSS Trigger: AGATGAGTACTGGCAGAACCACCCGGAGCTGCATGA...TGCTGAAATCTTCAGCTCTCCGTCTGTCTTCCTCTGGTCTGTACTGGCAAATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR TCA 90 bp | AGAATAAAGGACACATCAGTTGGTGGTCCTGCAGTAGTCAAGCCATCTGATGCATTGAATCATGCCTGGTaGGGCCATCACAACACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RIKDTSVGGPAVVKPSDALNHAW*GHHNTG Trigger: CCCAGTGTTGTGATGGCCTCACCAGGCATGATTCAA...TGCATCAGATGGCTTGACTACTGCAGGACCACCAACTGATGTGTCCTTTATTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR TCA 90 bp | CATTCAACTCAAAACTCAGATTTGCCAGTACAGACCAGAGGAAGACAGACGGAGATATGTCCTGGAGCATaGCCTCCAGCCTCTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HSTQNSDLPVQTRGRQTEICPGA*PPASCC Trigger: ACAGCAAGAGGCTGGAGGTCATGCTCCAGGACATAT...CTCCGTCTGTCTTCCTCTGGTCTGTACTGGCAAATCTGAGTTTTGAGTTGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR GCA 90 bp | TCAATTTCTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCTGTTGACAATGTCGTaGACAGTGTTGCAGAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SISGAGSRAGKRARCTGWLLTMS*TVLQNL Trigger: AAGATTCTGCAACACTGTGCACGACATTGTCAACAG...CCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAGAAATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221042.2 ENSMUST00000222968.2 |
||
| CDS-3UTR CCA 90 bp | TGCCAGTACAGACCAGAGGAAGACAGACGGAGAGCTGAAGATTTCAGCATACACAGGCCATCACAACACTaGGGCCAATGTCATCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CQYRPEEDRRRAEDFSIHRPSQH*GQCHQS Trigger: ACTTTGATGACATTGGCCCCAGTGTTGTGATGGCCT...GTGTATGCTGAAATCTTCAGCTCTCCGTCTGTCTTCCTCTGGTCTGTACTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR CCA 90 bp | AGATTTGCCAGTACAGACCAGAGGAAGACAGACGGAGAGCTGAAGATTTCAGCACCAGGTCAGTGTAATTaGAGAGGTCACAGGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RFASTDQRKTDGELKISAPGQCN*RGHRER Trigger: TCTCTCCCTGTGACCTCTCCAATTACACTGACCTGG...TGCTGAAATCTTCAGCTCTCCGTCTGTCTTCCTCTGGTCTGTACTGGCAAATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| 3UTR CAA 72 bp | CAGACTCAGTGTGGTGCTCAGGCAGAAGTGGCTCCCTaGAGGATTAGTTGGAGAATAAAGGACACATCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QTQCGAQAEVAP*RISWRIKDTSV Trigger: AACTGATGTGTCCTTTATTCTCCAACTAATCCTCAAGGGAGCCACTTCTGCCTGAGCACCACACTGAGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR TCA 90 bp | CAATTTCTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCTCTGTCTTCTTGTCTTaGGAAATCACCTGTATACAA | + |
|
Preference number: 4 (lower is better) Translates to: QFLELVVEQVKGPGVRDGSVFLS*EITCIQ Trigger: TTGTATACAGGTGATTTCTCAAGACAAGAAGACAGA...GCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAGAAATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221042.2 ENSMUST00000222968.2 |
||
| CDS-3UTR TCA 90 bp | ATTCAACTCAAAACTCAGATTTGCCAGTACAGACCAGAGGAAGACAGACGGAGACTGGATAAGCCGTTTTaGATCATGCCTGGTGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IQLKTQICQYRPEEDRRRLDKPF*IMPGEA Trigger: GGCCTCACCAGGCATGATTCAAAACGGCTTATCCAG...TCTCCGTCTGTCTTCCTCTGGTCTGTACTGGCAAATCTGAGTTTTGAGTTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR GCA 90 bp | AGATTTGCCAGTACAGACCAGAGGAAGACAGACGGAGAGCTGAAGATTTCAGCATGTCGTGCACAGTGTTaGAGAATCTTGCTTCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: RFASTDQRKTDGELKISACRAQC*RILLLA Trigger: AGCGAGAAGCAAGATTCTGCAACACTGTGCACGACA...TGCTGAAATCTTCAGCTCTCCGTCTGTCTTCCTCTGGTCTGTACTGGCAAATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR GCA 90 bp | GAGGACGGAGTCATCTTTCACACTGACACAGTCTTCTCCAAATATGTCCTGGAGTGTCGTGCACAGTGTTaGAGAATCTTGCTTCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: EDGVIFHTDTVFSKYVLECRAQC*RILLLA Trigger: AGCGAGAAGCAAGATTCTGCAACACTGTGCACGACA...CTCCAGGACATATTTGGAGAAGACTGTGTCAGTGTGAAAGATGACTCCGTCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
||
| CDS-3UTR GCA 90 bp | AGAATAAAGGACACATCAGTTGGTGGTCCTGCAGTAGTCAAGCCATCTGATGCAGGTTCAGACATGATGTaGTTGGCAAGTGTCCCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: RIKDTSVGGPAVVKPSDAGSDMM*LASVPS Trigger: CGAAGGGACACTTGCCAAGCACATCATGTCTGAACC...TGCATCAGATGGCTTGACTACTGCAGGACCACCAACTGATGTGTCCTTTATTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR GCA 90 bp | ATTCAACTCAAAACTCAGATTTGCCAGTACAGACCAGAGGAAGACAGACGGAGATTCTCGGATCAGCGCTaGTTTCAGCCTGGCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: IQLKTQICQYRPEEDRRRFSDQR*FQPGHF Trigger: GAAATGGCCAGGCTGAAAGCAGCGCTGATCCGAGAA...TCTCCGTCTGTCTTCCTCTGGTCTGTACTGGCAAATCTGAGTTTTGAGTTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR CCA 90 bp | TTTCTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCCTGAATGATCAGGATGTCTaGCTTAATATTAGGAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLELVVEQVKGPGVRDGLNDQDV*LNIRNL Trigger: GAGATTCCTAATATTAAGCCAGACATCCTGATCATT...CAGGCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221042.2 ENSMUST00000222968.2 |
||
| CDS-3UTR CCA 90 bp | GTGGCTCCCTTGAGGATTAGTTGGAGAATAAAGGACACATCAGTTGGTGGTCCTCGCTTCTCATGGATATaGGTCCCATACGTAGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: VAPLRISWRIKDTSVGGPRFSWI*VPYVDS Trigger: TGAGTCTACGTATGGGACCCATATCCATGAGAAGCG...AGGACCACCAACTGATGTGTCCTTTATTCTCCAACTAATCCTCAAGGGAGCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR CCA 90 bp | CACACTGACACAGTCTTCTCCAAATATGTCCTGGAGCATGACCTCCAGCCTCTTTCTTCACGCTTCTCATaGATATGGGTCCCATACGTA | + |
|
Preference number: 4 (lower is better) Translates to: HTDTVFSKYVLEHDLQPLSSRFS*IWVPYV Trigger: TACGTATGGGACCCATATCCATGAGAAGCGTGAAGA...AAGAGGCTGGAGGTCATGCTCCAGGACATATTTGGAGAAGACTGTGTCAGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
||
| CDS-3UTR CCA 90 bp | TTGAGGATTAGTTGGAGAATAAAGGACACATCAGTTGGTGGTCCTGCAGTAGTCGCGCTGCTTTCAGCCTaGCCATTTCATTCTGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LRISWRIKDTSVGGPAVVALLSA*PFHSVP Trigger: GGGAACAGAATGAAATGGCCAGGCTGAAAGCAGCGC...GACTACTGCAGGACCACCAACTGATGTGTCCTTTATTCTCCAACTAATCCTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR CCA 90 bp | AGAATAAAGGACACATCAGTTGGTGGTCCTGCAGTAGTCAAGCCATCTGATGCACCGCTGGCCCTGTTCTaGTTTCTTGTCTGCCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RIKDTSVGGPAVVKPSDAPLALF*FLVCQK Trigger: TTTTTGGCAGACAAGAAACCAGAACAGGGCCAGCGG...TGCATCAGATGGCTTGACTACTGCAGGACCACCAACTGATGTGTCCTTTATTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR GCA 90 bp | GTGGCTCCCTTGAGGATTAGTTGGAGAATAAAGGACACATCAGTTGGTGGTCCTAGTGTTGCAGAATCTTaGTTCTCGCTCTTCACGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VAPLRISWRIKDTSVGGPSVAES*FSLFTL Trigger: AAGCGTGAAGAGCGAGAAGCAAGATTCTGCAACACT...AGGACCACCAACTGATGTGTCCTTTATTCTCCAACTAATCCTCAAGGGAGCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR GCA 90 bp | TTGAGGATTAGTTGGAGAATAAAGGACACATCAGTTGGTGGTCCTGCAGTAGTCAGCTCCGGGTGGTTCTaGCAGTACTCATCTAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: LRISWRIKDTSVGGPAVVSSGWF*QYSSRI Trigger: GATTCTAGATGAGTACTGGCAGAACCACCCGGAGCT...GACTACTGCAGGACCACCAACTGATGTGTCCTTTATTCTCCAACTAATCCTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
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| CDS-3UTR CCA 90 bp | CAATTTCTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCAATGATCAGGATGTCTaGCTTAATATTAGGAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: QFLELVVEQVKGPGVRDGNDQDV*LNIRNL Trigger: GAGATTCCTAATATTAAGCCAGACATCCTGATCATT...GCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAGAAATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221042.2 ENSMUST00000222968.2 |
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| CDS-3UTR TCA 90 bp | AGAATAAAGGACACATCAGTTGGTGGTCCTGCAGTAGTCAAGCCATCTGATGCACCAATGTCATCAAAGTaGTCCATGCTCTTGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RIKDTSVGGPAVVKPSDAPMSSK*SMLLRL Trigger: CAACCTCAAGAGCATGGATCACTTTGATGACATTGG...TGCATCAGATGGCTTGACTACTGCAGGACCACCAACTGATGTGTCCTTTATTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
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| CDS-3UTR TCA 90 bp | ATTCAACTCAAAACTCAGATTTGCCAGTACAGACCAGAGGAAGACAGACGGAGAGTCCAGACATGGTCGTaGTTTCTTCAGGTTCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: IQLKTQICQYRPEEDRRRVQTWS*FLQVQT Trigger: TGTCTGAACCTGAAGAAATCACGACCATGTCTGGAC...TCTCCGTCTGTCTTCCTCTGGTCTGTACTGGCAAATCTGAGTTTTGAGTTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
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| CDS-3UTR GCA 90 bp | AGATTTGCCAGTACAGACCAGAGGAAGACAGACGGAGAGCTGAAGATTTCAGCACTGTTGACAATGTCGTaGACAGTGTTGCAGAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RFASTDQRKTDGELKISALLTMS*TVLQNL Trigger: AAGATTCTGCAACACTGTGCACGACATTGTCAACAG...TGCTGAAATCTTCAGCTCTCCGTCTGTCTTCCTCTGGTCTGTACTGGCAAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
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| CDS-3UTR GCA 90 bp | AGATTTGCCAGTACAGACCAGAGGAAGACAGACGGAGAGCTGAAGATTTCAGCATTGAGGTTGCTGATGTaGTTGAAAACAAAGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RFASTDQRKTDGELKISALRLLM*LKTKGL Trigger: CAACCCCTTTGTTTTCAAGCACATCAGCAACCTCAA...TGCTGAAATCTTCAGCTCTCCGTCTGTCTTCCTCTGGTCTGTACTGGCAAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
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| CDS-3UTR CCA 90 bp | CATTCAACTCAAAACTCAGATTTGCCAGTACAGACCAGAGGAAGACAGACGGAGATAGCTTTTGTGGCGTaGGTCATAAATGTCCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HSTQNSDLPVQTRGRQTEIAFVA*VINVRP Trigger: AGGACGGACATTTATGACCCACGCCACAAAAGCTAT...CTCCGTCTGTCTTCCTCTGGTCTGTACTGGCAAATCTGAGTTTTGAGTTGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR TCA 90 bp | AAAACACAATTAGATAAATTTCAGTCAACACACCCGTCAATTTCTGGAGCTGGTCTCTGCCCCCTCTGTTaGCAATGTCGTGCACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KTQLDKFQSTHPSISGAGLCPLC*QCRAQC Trigger: ACACTGTGCACGACATTGTCAACAGAGGGGGCAGAG...ACCAGCTCCAGAAATTGACGGGTGTGTTGACTGAAATTTATCTAATTGTGTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
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| CDS-3UTR GCA 90 bp | CATTCAACTCAAAACTCAGATTTGCCAGTACAGACCAGAGGAAGACAGACGGAGTTGTTGATGTTGATCTaGTTCCGGATCTTGTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HSTQNSDLPVQTRGRQTELLMLI*FRILSF Trigger: GAACGACAAGATCCGGAAGCAGATCAACATCAACAA...CTCCGTCTGTCTTCCTCTGGTCTGTACTGGCAAATCTGAGTTTTGAGTTGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR CCA 90 bp | TTGAGGATTAGTTGGAGAATAAAGGACACATCAGTTGGTGGTCCTGCAGTAGTCTCTTCACGCTTCTCATaGATATGGGTCCCATACGTA | + |
|
Preference number: 4 (lower is better) Translates to: LRISWRIKDTSVGGPAVVSSRFS*IWVPYV Trigger: TACGTATGGGACCCATATCCATGAGAAGCGTGAAGA...GACTACTGCAGGACCACCAACTGATGTGTCCTTTATTCTCCAACTAATCCTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
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| CDS-3UTR CCA 90 bp | CATTCAACTCAAAACTCAGATTTGCCAGTACAGACCAGAGGAAGACAGACGGAGAACCGACATTTTCAGTaGCAACTTCTGTCCAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: HSTQNSDLPVQTRGRQTENRHFQ*QLLSRH Trigger: ATGTCTGGACAGAAGTTGCCACTGAAAATGTCGGTT...CTCCGTCTGTCTTCCTCTGGTCTGTACTGGCAAATCTGAGTTTTGAGTTGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR TCA 90 bp | AGATTTGCCAGTACAGACCAGAGGAAGACAGACGGAGAGCTGAAGATTTCAGCAGACTTTGACATAGTCTaGGAGAAGCCATCTATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RFASTDQRKTDGELKISADFDIV*EKPSIN Trigger: ATTTATAGATGGCTTCTCTCAGACTATGTCAAAGTC...TGCTGAAATCTTCAGCTCTCCGTCTGTCTTCCTCTGGTCTGTACTGGCAAATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR TCA 90 bp | CATTCAACTCAAAACTCAGATTTGCCAGTACAGACCAGAGGAAGACAGACGGAGATCTTTGGATTTGACTaGACTTCCAATATCACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HSTQNSDLPVQTRGRQTEIFGFD*TSNITV Trigger: CACCGTGATATTGGAAGTTCAGTCAAATCCAAAGAT...CTCCGTCTGTCTTCCTCTGGTCTGTACTGGCAAATCTGAGTTTTGAGTTGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR TCA 90 bp | AGAATAAAGGACACATCAGTTGGTGGTCCTGCAGTAGTCAAGCCATCTGATGCAAGTCATCTTTCACACTaGCACAGTCTTCTCCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: RIKDTSVGGPAVVKPSDASHLSH*HSLLQI Trigger: TATTTGGAGAAGACTGTGTCAGTGTGAAAGATGACT...TGCATCAGATGGCTTGACTACTGCAGGACCACCAACTGATGTGTCCTTTATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR GCA 90 bp | AAACTCAGATTTGCCAGTACAGACCAGAGGAAGACAGACGGAGAGCTGAAGATTCCAGAACTTGATTCCTaGAACTTCCTTAACTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: KLRFASTDQRKTDGELKIPELDS*NFLNFM Trigger: CATGAAGTTAAGGAAGTTGCAGGAATCAAGTTCTGG...AATCTTCAGCTCTCCGTCTGTCTTCCTCTGGTCTGTACTGGCAAATCTGAGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR GCA 90 bp | AAAACACAATTAGATAAATTTCAGTCAACACACCCGTCAATTTCTGGAGCTGGTTTCTCGGATCAGCGCTaGTTTCAGCCTGGCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: KTQLDKFQSTHPSISGAGFSDQR*FQPGHF Trigger: GAAATGGCCAGGCTGAAAGCAGCGCTGATCCGAGAA...ACCAGCTCCAGAAATTGACGGGTGTGTTGACTGAAATTTATCTAATTGTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
||
| CDS-3UTR GCA 90 bp | TTGAGGATTAGTTGGAGAATAAAGGACACATCAGTTGGTGGTCCTGCAGTAGTCAGAGACCTTCTGTACTaGACCTTTCCTTATCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRISWRIKDTSVGGPAVVRDLLY*TFPYLW Trigger: CCAAAGATAAGGAAAGGTGCAGTACAGAAGGTCTCT...GACTACTGCAGGACCACCAACTGATGTGTCCTTTATTCTCCAACTAATCCTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR CCA 90 bp | TTGGATTTGACTGAACTTCCAATATCACGGTGGTCACTGTGTCTGCATACATGTATAGCTTTTGTGGCGTaGGTCATAAATGTCCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LDLTELPISRWSLCLHTCIAFVA*VINVRP Trigger: AGGACGGACATTTATGACCCACGCCACAAAAGCTAT...ACATGTATGCAGACACAGTGACCACCGTGATATTGGAAGTTCAGTCAAATCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
||
| CDS-3UTR CCA 90 bp | ACACAATTAGATAAATTTCAGTCAACACACCCGTCAATTTCTGGAGCTGGTAGTCCAGGTCAGTGTAATTaGAGAGGTCACAGGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TQLDKFQSTHPSISGAGSPGQCN*RGHRER Trigger: TCTCTCCCTGTGACCTCTCCAATTACACTGACCTGG...ACTACCAGCTCCAGAAATTGACGGGTGTGTTGACTGAAATTTATCTAATTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
||
| CDS-3UTR TCA 90 bp | AAAACACAATTAGATAAATTTCAGTCAACACACCCGTCAATTTCTGGAGCTGGTCTTCAGGTTCAGACATaGTGTGCTTGGCAAGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KTQLDKFQSTHPSISGAGLQVQT*CAWQVS Trigger: GGACACTTGCCAAGCACATCATGTCTGAACCTGAAG...ACCAGCTCCAGAAATTGACGGGTGTGTTGACTGAAATTTATCTAATTGTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
||
| CDS-3UTR CCA 90 bp | ACACAATTAGATAAATTTCAGTCAACACACCCGTCAATTTCTGGAGCTGGTAGTCGCTTCTCATGGATATaGGTCCCATACGTAGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: TQLDKFQSTHPSISGAGSRFSWI*VPYVDS Trigger: TGAGTCTACGTATGGGACCCATATCCATGAGAAGCG...ACTACCAGCTCCAGAAATTGACGGGTGTGTTGACTGAAATTTATCTAATTGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
||
| CDS-3UTR CCA 90 bp | AGAATAAAGGACACATCAGTTGGTGGTCCTGCAGTAGTCAAGCCATCTGATGCAAATGATCAGGATGTCTaGCTTAATATTAGGAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: RIKDTSVGGPAVVKPSDANDQDV*LNIRNL Trigger: GAGATTCCTAATATTAAGCCAGACATCCTGATCATT...TGCATCAGATGGCTTGACTACTGCAGGACCACCAACTGATGTGTCCTTTATTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR GCA 90 bp | ACACAATTAGATAAATTTCAGTCAACACACCCGTCAATTTCTGGAGCTGGTAGTTTGTTGATGTTGATCTaGTTCCGGATCTTGTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TQLDKFQSTHPSISGAGSLLMLI*FRILSF Trigger: GAACGACAAGATCCGGAAGCAGATCAACATCAACAA...ACTACCAGCTCCAGAAATTGACGGGTGTGTTGACTGAAATTTATCTAATTGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
||
| CDS-3UTR GCA 90 bp | AAAACACAATTAGATAAATTTCAGTCAACACACCCGTCAATTTCTGGAGCTGGTCCAGAACTTGATTCCTaGAACTTCCTTAACTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: KTQLDKFQSTHPSISGAGPELDS*NFLNFM Trigger: CATGAAGTTAAGGAAGTTGCAGGAATCAAGTTCTGG...ACCAGCTCCAGAAATTGACGGGTGTGTTGACTGAAATTTATCTAATTGTGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
||
| CDS-3UTR CAA 90 bp | GTAGATGTGCATGAGCAGCTGTGGGGACGGCGGCCATGCAGGCCTCACAGGGCAATGTCGTGCACAGTGTaGCAGAATCTTGCTTCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: VDVHEQLWGRRPCRPHRAMSCTV*QNLASR Trigger: GCGAGAAGCAAGATTCTGCAACACTGTGCACGACAT...TGCCCTGTGAGGCCTGCATGGCCGCCGTCCCCACAGCTGCTCATGCACATCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
||
| CDS GCA 90 bp | CACGTAGGTCTGGTACACGGCCATGCACTTCTTGGCCAGAGACGATaGGTAGTAAATGGGTATGTCATGCAGCTCCGGGTGGTTCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: HVGLVHGHALLGQRR*VVNGYVMQLRVVLP Trigger: TGGCAGAACCACCCGGAGCTGCATGACATACCCATTTACTACGCATCGTCTCTGGCCAAGAAGTGCATGGCCGTGTACCAGACCTACGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067284.10 ENSMUST00000222968.2 |
||
| CDS-3UTR CAA 90 bp | GGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCCTGGGTCTAAGGGGTTGTTGATGTaGATCTGCTTCCGGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GAGSRAGKRARCTGWPGSKGLLM*ICFRIL Trigger: CAAGATCCGGAAGCAGATCAACATCAACAACCCCTT...AGACCCAGGCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
||
| CDS TCA 90 bp | AAGCCCATGACCTGCTGCCTTGTACCTTGGCGAGCTTCTCTCCCCTaGAGTTTAAGGTCACGGCCTCTGTGTTCCGAGGATTGTGAACCT | + |
|
Preference number: 5 (lower is better) Translates to: KPMTCCLVPWRASLP*SLRSRPLCSEDCEP Trigger: AGGTTCACAATCCTCGGAACACAGAGGCCGTGACCTTAAACTTCAGGGGAGAGAAGCTCGCCAAGGTACAAGGCAGCAGGTCATGGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
||
| CDS TCA 90 bp | AGCTCTCAAAGTACATACACCACGTCTTTAATTTCCCCGCCCATCTaGGCACGTGTAGGGTCAGGGGTCGGATCAGCAGCTGGTCGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSQSTYTTSLISPPI*ARVGSGVGSAAGRS Trigger: AGAGCGACCAGCTGCTGATCCGACCCCTGACCCTACACGTGCTCAGATGGGCGGGGAAATTAAAGACGTGGTGTATGTACTTTGAGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221507.2 |
||
| CDS-3UTR CAA 90 bp | GTGAGCCCCCAGGGACAAAGCTCTGTCTGCCCTAGTGTAGATGTGCATGAGCAGCAGTGTTGCAGAATCTaGCTTCTCGCTCTTCACGCT | + |
|
Preference number: 5 (lower is better) Translates to: VSPQGQSSVCPSVDVHEQQCCRI*LLALHA Trigger: AGCGTGAAGAGCGAGAAGCAAGATTCTGCAACACTG...CTGCTCATGCACATCTACACTAGGGCAGACAGAGCTTTGTCCCTGGGGGCTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
||
| CDS-3UTR CAA 90 bp | CGGAAAGTGCCTGGAGGCAGACTCAGTGTGGTGCTCAGGCAGAAGTGGCTCCCTTCCATGCTCTTGAGGTaGCTGATGTGCTTGAAAACA | + |
|
Preference number: 5 (lower is better) Translates to: RKVPGGRLSVVLRQKWLPSMLLR*LMCLKT Trigger: TGTTTTCAAGCACATCAGCAACCTCAAGAGCATGGA...AGGGAGCCACTTCTGCCTGAGCACCACACTGAGTCTGCCTCCAGGCACTTTCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
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| CDS-3UTR CAA 90 bp | GGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCCTGGGTCTTCCATGCTCTTGAGGTaGCTGATGTGCTTGAAAACA | + |
|
Preference number: 5 (lower is better) Translates to: GAGSRAGKRARCTGWPGSSMLLR*LMCLKT Trigger: TGTTTTCAAGCACATCAGCAACCTCAAGAGCATGGA...AGACCCAGGCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
||
| CDS CCA 90 bp | GGTACACGGCCATGCACTTCTTGGCCAGAGACGATGCGTAGTAAATaGGTATGTCATGCAGCTCCGGGTGGTTCTGCCAGTACTCATCTA | + |
|
Preference number: 5 (lower is better) Translates to: GTRPCTSWPETMRSK*VCHAAPGGSASTHL Trigger: TAGATGAGTACTGGCAGAACCACCCGGAGCTGCATGACATACCCATTTACTACGCATCGTCTCTGGCCAAGAAGTGCATGGCCGTGTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067284.10 ENSMUST00000222968.2 |
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| CDS CCA 90 bp | CGTTCATGGCATTCACGTAGGTCTGGTACACGGCCATGCACTTCTTaGCCAGAGACGATGCGTAGTAAATGGGTATGTCATGCAGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: RSWHSRRSGTRPCTS*PETMRSKWVCHAAP Trigger: CGGAGCTGCATGACATACCCATTTACTACGCATCGTCTCTGGCCAAGAAGTGCATGGCCGTGTACCAGACCTACGTGAATGCCATGAACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067284.10 ENSMUST00000222968.2 |
||
| CDS-3UTR CAA 90 bp | GTGCACCGGCGTCAGAGCCTCGTACAGTCTCTGGGCGGCCAGTTCCACCATTTCTTGATGGTTTCGATTTaGTCCATGCTTTCTTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VHRRQSLVQSLGGQFHHFLMVSI*SMLSSK Trigger: CTTGGAAGAAAGCATGGACAAAATCGAAACCATCAA...GAAATGGTGGAACTGGCCGCCCAGAGACTGTACGAGGCTCTGACGCCGGTGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
||
| CDS-3UTR CAA 90 bp | CAATTTCTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCATGTCGTGCACAGTGTaGCAGAATCTTGCTTCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: QFLELVVEQVKGPGVRDGMSCTV*QNLASR Trigger: GCGAGAAGCAAGATTCTGCAACACTGTGCACGACAT...GCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAGAAATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221042.2 ENSMUST00000222968.2 |
||
| CDS-3UTR CAA 90 bp | CAATTTCTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCTCAGACATGATGTGCTaGGCAAGTGTCCCTTCGACA | + |
|
Preference number: 5 (lower is better) Translates to: QFLELVVEQVKGPGVRDGSDMMC*ASVPST Trigger: TGTCGAAGGGACACTTGCCAAGCACATCATGTCTGA...GCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAGAAATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
||
| CDS GCA 90 bp | GCAAAGACAGGAATGAGCCCTCTGCCCCCTCTGTTGACAATGTCGTaGACAGTGTTGCAGAATCTTGCTTCTCGCTCTTCACGCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AKTGMSPLPPLLTMS*TVLQNLASRSSRFS Trigger: TGAGAAGCGTGAAGAGCGAGAAGCAAGATTCTGCAACACTGTGCACGACATTGTCAACAGAGGGGGCAGAGGGCTCATTCCTGTCTTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067284.10 ENSMUST00000221042.2 ENSMUST00000221145.2 ENSMUST00000222968.2 |
||
| CDS-3UTR CAA 90 bp | CGGAAAGTGCCTGGAGGCAGACTCAGTGTGGTGCTCAGGCAGAAGTGGCTCCCTTTGATGGTTTCGATTTaGTCCATGCTTTCTTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RKVPGGRLSVVLRQKWLPLMVSI*SMLSSK Trigger: CTTGGAAGAAAGCATGGACAAAATCGAAACCATCAA...AGGGAGCCACTTCTGCCTGAGCACCACACTGAGTCTGCCTCCAGGCACTTTCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
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| CDS-3UTR CAA 90 bp | CTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCCTGGGTTTGATGGTTTCGATTTaGTCCATGCTTTCTTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LELVVEQVKGPGVRDGLGLMVSI*SMLSSK Trigger: CTTGGAAGAAAGCATGGACAAAATCGAAACCATCAA...ACCCAGGCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221042.2 ENSMUST00000222968.2 |
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| CDS-3UTR CAA 90 bp | TCAATTTCTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGATCTGCTTCCGGATCTaGTCGTTCATGGCATTCACG | + |
|
Preference number: 5 (lower is better) Translates to: SISGAGSRAGKRARCTGWICFRI*SFMAFT Trigger: CGTGAATGCCATGAACGACAAGATCCGGAAGCAGAT...CCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAGAAATTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
||
| CDS-3UTR CAA 90 bp | AGTGCCTGGAGGCAGACTCAGTGTGGTGCTCAGGCAGAAGTGGCTCCCTTGAGGAATAAATTCACTGGTTaGCTGGTAATCTGTGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SAWRQTQCGAQAEVAPLRNKFTG*LVICVS Trigger: GCTCACACAGATTACCAGCAAACCAGTGAATTTATT...CCTCAAGGGAGCCACTTCTGCCTGAGCACCACACTGAGTCTGCCTCCAGGCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
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| CDS GCA 90 bp | TCTGCCCCCTCTGTTGACAATGTCGTGCACAGTGTTGCAGAATCTTaGTTCTCGCTCTTCACGCTTCTCATGGATATGGGTCCCATACGT | + |
|
Preference number: 5 (lower is better) Translates to: SAPSVDNVVHSVAES*FSLFTLLMDMGPIR Trigger: ACGTATGGGACCCATATCCATGAGAAGCGTGAAGAGCGAGAAGCAAGATTCTGCAACACTGTGCACGACATTGTCAACAGAGGGGGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067284.10 ENSMUST00000221042.2 ENSMUST00000221145.2 ENSMUST00000222968.2 |
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| CDS CCA 90 bp | GCAGGTGGATTTCTGAGTTTGAGGCCAGAGACGATGCGTAGTAAATaGGTATGTCATGCAGCTCCGGGTGGTTCTGCCAGTACTCATCTA | + |
|
Preference number: 5 (lower is better) Translates to: AGGFLSLRPETMRSK*VCHAAPGGSASTHL Trigger: TAGATGAGTACTGGCAGAACCACCCGGAGCTGCATGACATACCCATTTACTACGCATCGTCTCTGGCCTCAAACTCAGAAATCCACCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221042.2 |
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| CDS-3UTR CAA 90 bp | CAATTTCTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCAGGTTGCTGATGTGCTaGAAAACAAAGGGGTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QFLELVVEQVKGPGVRDGRLLMC*KTKGLL Trigger: CAACAACCCCTTTGTTTTCAAGCACATCAGCAACCT...GCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAGAAATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
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| CDS-3UTR CAA 90 bp | AGATTTGCCAGTACAGACCAGAGGAAGACAGACGGAGAGCTGAAGATTTCAGCAAAAAAGCCCATGACCTaGGCGAGCTTCTCTCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RFASTDQRKTDGELKISAKKPMT*ASFSPL Trigger: CAGGGGAGAGAAGCTCGCCAAGGTCATGGGCTTTTT...TGCTGAAATCTTCAGCTCTCCGTCTGTCTTCCTCTGGTCTGTACTGGCAAATCT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
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| CDS GCA 90 bp | GGATCTTGTCGTTCATGGCATTCACGTAGGTCTGGTACACGGCCATaGACTTCTTGGCCAGAGACGATGCGTAGTAAATGGGTATGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GSCRSWHSRRSGTRP*TSWPETMRSKWVCH Trigger: ATGACATACCCATTTACTACGCATCGTCTCTGGCCAAGAAGTGCATGGCCGTGTACCAGACCTACGTGAATGCCATGAACGACAAGATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067284.10 ENSMUST00000222968.2 |
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| CDS-3UTR CAA 90 bp | CAGATTTGCCAGTACAGACCAGAGGAAGACAGACGGAGAGCTGAAGATTTCAGCATGTCGTGCACAGTGTaGCAGAATCTTGCTTCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: QICQYRPEEDRRRAEDFSMSCTV*QNLASR Trigger: GCGAGAAGCAAGATTCTGCAACACTGTGCACGACAT...GCTGAAATCTTCAGCTCTCCGTCTGTCTTCCTCTGGTCTGTACTGGCAAATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
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| CDS-3UTR CAA 90 bp | TGCCAGTACAGACCAGAGGAAGACAGACGGAGAGCTGAAGATTTCAGCATACACATCTGCTTCCGGATCTaGTCGTTCATGGCATTCACG | + |
|
Preference number: 5 (lower is better) Translates to: CQYRPEEDRRRAEDFSIHICFRI*SFMAFT Trigger: CGTGAATGCCATGAACGACAAGATCCGGAAGCAGAT...GTGTATGCTGAAATCTTCAGCTCTCCGTCTGTCTTCCTCTGGTCTGTACTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
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| CDS-3UTR CAA 90 bp | TTTCTGGAGCTGGTAGTAGAGCAGGTAAAAGGGCCCGGTGTACGGGATGGCCTGAATAAATTCACTGGTTaGCTGGTAATCTGTGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FLELVVEQVKGPGVRDGLNKFTG*LVICVS Trigger: GCTCACACAGATTACCAGCAAACCAGTGAATTTATT...CAGGCCATCCCGTACACCGGGCCCTTTTACCTGCTCTACTACCAGCTCCAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
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| CDS GCA 90 bp | TGTATACAAAAGCTTCACACCAGCGATCTCTATCATAAACATGGCTaGTCCCAGGACGTGGCCGGCATGGTAACACCAGAACTTGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: CIQKLHTSDLYHKHG*SQDVAGMVTPELDS Trigger: GGAATCAAGTTCTGGTGTTACCATGCCGGCCACGTCCTGGGAGCAGCCATGTTTATGATAGAGATCGCTGGTGTGAAGCTTTTGTATACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067284.10 ENSMUST00000221042.2 ENSMUST00000221145.2 ENSMUST00000222968.2 |
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| CDS CCA 90 bp | TGCACAGTGTTGCAGAATCTTGCTTCTCGCTCTTCACGCTTCTCATaGATATGGGTCCCATACGTAGACTCAATGATCAGGATGTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CTVLQNLASRSSRFS*IWVPYVDSMIRMSG Trigger: GCCAGACATCCTGATCATTGAGTCTACGTATGGGACCCATATCCATGAGAAGCGTGAAGAGCGAGAAGCAAGATTCTGCAACACTGTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067284.10 ENSMUST00000221042.2 ENSMUST00000221145.2 ENSMUST00000222968.2 |
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| CDS GCA 90 bp | TACACCAGCTTTCAAACAGCTCTCTGGATAAGCCGTTTTGAATCATaGCTGGTGAGGCCATCACAACACTGGGGCCAATGTCATCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: YTSFQTALWISRFES*LVRPSQHWGQCHQS Trigger: ACTTTGATGACATTGGCCCCAGTGTTGTGATGGCCTCACCAGGCATGATTCAAAACGGCTTATCCAGAGAGCTGTTTGAAAGCTGGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067284.10 ENSMUST00000222968.2 |
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| CDS CCA 90 bp | AAAGTTTCTTTTAACAAGAATTCCAGAGACCCGCTGGCCCTGTTCTaGTTTCTTGTCTGCCAAAAAGCCCATGACCTTGGCGAGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KVSFNKNSRDPLALF*FLVCQKAHDLGELL Trigger: GAGAAGCTCGCCAAGGTCATGGGCTTTTTGGCAGACAAGAAACCAGAACAGGGCCAGCGGGTCTCTGGAATTCTTGTTAAAAGAAACTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
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| CDS CCA 90 bp | AAAGTTTCTTTTAACAAGAATTCCAGAGACCCGCTGGCCCTGTTCTaGTTTCTTGTCTGCCAAAAAGCCCATGACCTGCTGCCTTGTACC | + |
|
Preference number: 5 (lower is better) Translates to: KVSFNKNSRDPLALF*FLVCQKAHDLLPCT Trigger: GGTACAAGGCAGCAGGTCATGGGCTTTTTGGCAGACAAGAAACCAGAACAGGGCCAGCGGGTCTCTGGAATTCTTGTTAAAAGAAACTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
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| CDS-3UTR CAA 90 bp | CATTCAACTCAAAACTCAGATTTGCCAGTACAGACCAGAGGAAGACAGACGGAGCAGTGTTGCAGAATCTaGCTTCTCGCTCTTCACGCT | + |
|
Preference number: 5 (lower is better) Translates to: HSTQNSDLPVQTRGRQTEQCCRI*LLALHA Trigger: AGCGTGAAGAGCGAGAAGCAAGATTCTGCAACACTG...CTCCGTCTGTCTTCCTCTGGTCTGTACTGGCAAATCTGAGTTTTGAGTTGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
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| CDS-3UTR CAA 90 bp | TGCCAGTACAGACCAGAGGAAGACAGACGGAGAGCTGAAGATTTCAGCATACACAGGTTGCTGATGTGCTaGAAAACAAAGGGGTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CQYRPEEDRRRAEDFSIHRLLMC*KTKGLL Trigger: CAACAACCCCTTTGTTTTCAAGCACATCAGCAACCT...GTGTATGCTGAAATCTTCAGCTCTCCGTCTGTCTTCCTCTGGTCTGTACTGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
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| CDS-3UTR CAA 90 bp | AGAATAAAGGACACATCAGTTGGTGGTCCTGCAGTAGTCAAGCCATCTGATGCATCAGACATGATGTGCTaGGCAAGTGTCCCTTCGACA | + |
|
Preference number: 5 (lower is better) Translates to: RIKDTSVGGPAVVKPSDASDMMC*ASVPST Trigger: TGTCGAAGGGACACTTGCCAAGCACATCATGTCTGA...TGCATCAGATGGCTTGACTACTGCAGGACCACCAACTGATGTGTCCTTTATTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
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| CDS CCA 90 bp | GTGATCCAAATGGAAATGACTGATCAACAGAAGGTCGATCTCAGCTaGGTCGATAAGGTCAATGTAAGGAAGGGCATCCATTCCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VIQMEMTDQQKVDLS*VDKVNVRKGIHSFQ Trigger: CTGGAAGGAATGGATGCCCTTCCTTACATTGACCTTATCGACCCAGCTGAGATCGACCTTCTGTTGATCAGTCATTTCCATTTGGATCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067284.10 ENSMUST00000221145.2 ENSMUST00000221507.2 ENSMUST00000222968.2 |
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| CDS GCA 90 bp | TGCTCCCAGGACGTGGCCGGCATGGTAACACCAGAACTTGATTCCTaGAACTTCCTTAACTTCATGAAAATTGATGGTTTCGATTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: CSQDVAGMVTPELDS*NFLNFMKIDGFDFV Trigger: GACAAAATCGAAACCATCAATTTTCATGAAGTTAAGGAAGTTGCAGGAATCAAGTTCTGGTGTTACCATGCCGGCCACGTCCTGGGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067284.10 ENSMUST00000221042.2 ENSMUST00000221145.2 ENSMUST00000222968.2 |
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| CDS CCA 90 bp | GTGTTGCAGAATCTTGCTTCTCGCTCTTCACGCTTCTCATGGATATaGGTCCCATACGTAGACTCAATGATCAGGATGTCTGGCTTAATA | + |
|
Preference number: 5 (lower is better) Translates to: VLQNLASRSSRFSWI*VPYVDSMIRMSGLI Trigger: TATTAAGCCAGACATCCTGATCATTGAGTCTACGTATGGGACCCATATCCATGAGAAGCGTGAAGAGCGAGAAGCAAGATTCTGCAACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067284.10 ENSMUST00000221042.2 ENSMUST00000221145.2 ENSMUST00000222968.2 |
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| CDS CCA 90 bp | CTTCATCATTATCTTCATATTCTCGGATCAGCGCTGCTTTCAGCCTaGCCATTTCATTCTGTTCCCCATGGACTAAAATCACGTGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LHHYLHILGSALLSA*PFHSVPHGLKSREV Trigger: CACCTCACGTGATTTTAGTCCATGGGGAACAGAATGAAATGGCCAGGCTGAAAGCAGCGCTGATCCGAGAATATGAAGATAATGATGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067284.10 ENSMUST00000222968.2 |
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| CDS-3UTR CAA 90 bp | TTGAGGATTAGTTGGAGAATAAAGGACACATCAGTTGGTGGTCCTGCAGTAGTCAAGGGGTTGTTGATGTaGATCTGCTTCCGGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LRISWRIKDTSVGGPAVVKGLLM*ICFRIL Trigger: CAAGATCCGGAAGCAGATCAACATCAACAACCCCTT...GACTACTGCAGGACCACCAACTGATGTGTCCTTTATTCTCCAACTAATCCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR CAA 90 bp | AAACTCAGATTTGCCAGTACAGACCAGAGGAAGACAGACGGAGAGCTGAAGATTAAAACAAAGGGGTTGTaGATGTTGATCTGCTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: KLRFASTDQRKTDGELKIKTKGL*MLICFR Trigger: CCGGAAGCAGATCAACATCAACAACCCCTTTGTTTT...AATCTTCAGCTCTCCGTCTGTCTTCCTCTGGTCTGTACTGGCAAATCTGAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067284.10 |
||
| CDS-3UTR CAA 90 bp | ACACAATTAGATAAATTTCAGTCAACACACCCGTCAATTTCTGGAGCTGGTAGTAAAACAAAGGGGTTGTaGATGTTGATCTGCTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TQLDKFQSTHPSISGAGSKTKGL*MLICFR Trigger: CCGGAAGCAGATCAACATCAACAACCCCTTTGTTTT...ACTACCAGCTCCAGAAATTGACGGGTGTGTTGACTGAAATTTATCTAATTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
||
| CDS TCA 72 bp | ACCTGCTGCCTTGTACCTTGGCGAGCTTCTCTCCCCTaGAGTTTAAGGTCACGGCCTCTGTGTTCCGAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: TCCLVPWRASLP*SLRSRPLCSED Trigger: ATCCTCGGAACACAGAGGCCGTGACCTTAAACTTCAGGGGAGAGAAGCTCGCCAAGGTACAAGGCAGCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
||
| CDS TCA 72 bp | GGCCCTGTTCTGGTTTCTTGTCTGCCAAAAAGCCCATaGCCTGCTGCCTTGTACCTTGGCGAGCTTCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GPVLVSCLPKSP*PAALYLGELLS Trigger: GGAGAGAAGCTCGCCAAGGTACAAGGCAGCAGGTCATGGGCTTTTTGGCAGACAAGAAACCAGAACAGGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
||
| CDS GCA 72 bp | CTGGTACACGGCCATGCACTTCTTGGCCAGAGACGATaGGTAGTAAATGGGTATGTCATGCAGCTCCGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LVHGHALLGQRR*VVNGYVMQLRV Trigger: CACCCGGAGCTGCATGACATACCCATTTACTACGCATCGTCTCTGGCCAAGAAGTGCATGGCCGTGTACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067284.10 ENSMUST00000222968.2 |
||
| CDS TCA 72 bp | AGTACATACACCACGTCTTTAATTTCCCCGCCCATCTaGGCACGTGTAGGGTCAGGGGTCGGATCAGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: STYTTSLISPPI*ARVGSGVGSAA Trigger: AGCTGCTGATCCGACCCCTGACCCTACACGTGCTCAGATGGGCGGGGAAATTAAAGACGTGGTGTATGTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221507.2 |
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| CDS CCA 72 bp | CCATGCACTTCTTGGCCAGAGACGATGCGTAGTAAATaGGTATGTCATGCAGCTCCGGGTGGTTCTGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: PCTSWPETMRSK*VCHAAPGGSAS Trigger: ACTGGCAGAACCACCCGGAGCTGCATGACATACCCATTTACTACGCATCGTCTCTGGCCAAGAAGTGCATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067284.10 ENSMUST00000222968.2 |
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| CDS CAA 72 bp | GTCTGCCAAAAAGCCCATGACCTGCTGCCTTGTACCTaGGCGAGCTTCTCTCCCCTGAAGTTTAAGGTCACG | + |
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Preference number: 6 (lower is better) Translates to: VCQKAHDLLPCT*ASFSPLKFKVT Trigger: CGTGACCTTAAACTTCAGGGGAGAGAAGCTCGCCAAGGTACAAGGCAGCAGGTCATGGGCTTTTTGGCAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
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| CDS CAA 90 bp | GCTCTTCCGAGAGCAAAGACAGGAATGAGCCCTCTGCCCCCTCTGTaGACAATGTCGTGCACAGTGTTGCAGAATCTTGCTTCTCGCTCT | + |
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Preference number: 6 (lower is better) Translates to: ALPRAKTGMSPLPPL*TMSCTVLQNLASRS Trigger: AGAGCGAGAAGCAAGATTCTGCAACACTGTGCACGACATTGTCAACAGAGGGGGCAGAGGGCTCATTCCTGTCTTTGCTCTCGGAAGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067284.10 ENSMUST00000221042.2 ENSMUST00000221145.2 ENSMUST00000222968.2 |
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| CDS CAA 90 bp | TGGTTTCTTGTCTGCCAAAAAGCCCATGACCTGCTGCCTTGTACCTaGGCGAGCTTCTCTCCCCTGAAGTTTAAGGTCACGGCCTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: WFLVCQKAHDLLPCT*ASFSPLKFKVTASV Trigger: CACAGAGGCCGTGACCTTAAACTTCAGGGGAGAGAAGCTCGCCAAGGTACAAGGCAGCAGGTCATGGGCTTTTTGGCAGACAAGAAACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
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| CDS GCA 72 bp | AAGCTTCACACCAGCGATCTCTATCATAAACATGGCTaGTCCCAGGACGTGGCCGGCATGGTAACACCAGAA | + |
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Preference number: 6 (lower is better) Translates to: KLHTSDLYHKHG*SQDVAGMVTPE Trigger: TTCTGGTGTTACCATGCCGGCCACGTCCTGGGAGCAGCCATGTTTATGATAGAGATCGCTGGTGTGAAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067284.10 ENSMUST00000221042.2 ENSMUST00000221145.2 ENSMUST00000222968.2 |
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| CDS GCA 72 bp | CGTTCATGGCATTCACGTAGGTCTGGTACACGGCCATaGACTTCTTGGCCAGAGACGATGCGTAGTAAATGG | + |
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Preference number: 6 (lower is better) Translates to: RSWHSRRSGTRP*TSWPETMRSKW Trigger: CCATTTACTACGCATCGTCTCTGGCCAAGAAGTGCATGGCCGTGTACCAGACCTACGTGAATGCCATGAACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067284.10 ENSMUST00000222968.2 |
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| CDS CAA 72 bp | CCTCTGCCCCCTCTGTTGACAATGTCGTGCACAGTGTaGCAGAATCTTGCTTCTCGCTCTTCACGCTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: PLPPLLTMSCTV*QNLASRSSRFS Trigger: TGAGAAGCGTGAAGAGCGAGAAGCAAGATTCTGCAACACTGTGCACGACATTGTCAACAGAGGGGGCAGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067284.10 ENSMUST00000221042.2 ENSMUST00000221145.2 ENSMUST00000222968.2 |
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| CDS CAA 90 bp | GGAATGAGCCCTCTGCCCCCTCTGTTGACAATGTCGTGCACAGTGTaGCAGAATCTTGCTTCTCGCTCTTCACGCTTCTCATGGATATGG | + |
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Preference number: 6 (lower is better) Translates to: GMSPLPPLLTMSCTV*QNLASRSSRFSWIW Trigger: CCATATCCATGAGAAGCGTGAAGAGCGAGAAGCAAGATTCTGCAACACTGTGCACGACATTGTCAACAGAGGGGGCAGAGGGCTCATTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067284.10 ENSMUST00000221042.2 ENSMUST00000221145.2 ENSMUST00000222968.2 |
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| CDS CAA 90 bp | CTTTTAACAAGAATTCCAGAGACCCGCTGGCCCTGTTCTGGTTTCTaGTCTGCCAAAAAGCCCATGACCTGCTGCCTTGTACCTTGGCGA | + |
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Preference number: 6 (lower is better) Translates to: LLTRIPETRWPCSGF*SAKKPMTCCLVPWR Trigger: TCGCCAAGGTACAAGGCAGCAGGTCATGGGCTTTTTGGCAGACAAGAAACCAGAACAGGGCCAGCGGGTCTCTGGAATTCTTGTTAAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222968.2 |
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| CDS GCA 72 bp | TTGAACTCCAGAATAATACATGATCTTCCCACTTCTTaGCCAGCACCAAGGGGTCGGATCAGCAGCTGGTCG | + |
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Preference number: 6 (lower is better) Translates to: LNSRIIHDLPTS*PAPRGRISSWS Trigger: CGACCAGCTGCTGATCCGACCCCTTGGTGCTGGGCAAGAAGTGGGAAGATCATGTATTATTCTGGAGTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067284.10 ENSMUST00000222968.2 |
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| CDS CCA 72 bp | CATTCACGTAGGTCTGGTACACGGCCATGCACTTCTTaGCCAGAGACGATGCGTAGTAAATGGGTATGTCAT | + |
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Preference number: 6 (lower is better) Translates to: HSRRSGTRPCTS*PETMRSKWVCH Trigger: ATGACATACCCATTTACTACGCATCGTCTCTGGCCAAGAAGTGCATGGCCGTGTACCAGACCTACGTGAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067284.10 ENSMUST00000222968.2 |
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| CDS TCA 72 bp | GAGGCCATCACAACACTGGGGCCAATGTCATCAAAGTaGTCCATGCTCTTGAGGTTGCTGATGTGCTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: EAITTLGPMSSK*SMLLRLLMCLK Trigger: TTTCAAGCACATCAGCAACCTCAAGAGCATGGATCACTTTGATGACATTGGCCCCAGTGTTGTGATGGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067284.10 ENSMUST00000222968.2 |
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| CDS GCA 72 bp | TTTCAAACAGCTCTCTGGATAAGCCGTTTTGAATCATaGCTGGTGAGGCCATCACAACACTGGGGCCAATGT | + |
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Preference number: 6 (lower is better) Translates to: FQTALWISRFES*LVRPSQHWGQC Trigger: ACATTGGCCCCAGTGTTGTGATGGCCTCACCAGGCATGATTCAAAACGGCTTATCCAGAGAGCTGTTTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067284.10 ENSMUST00000222968.2 |
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| CDS GCA 72 bp | TCTGTTGACAATGTCGTGCACAGTGTTGCAGAATCTTaGTTCTCGCTCTTCACGCTTCTCATGGATATGGGT | + |
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Preference number: 6 (lower is better) Translates to: SVDNVVHSVAES*FSLFTLLMDMG Trigger: ACCCATATCCATGAGAAGCGTGAAGAGCGAGAAGCAAGATTCTGCAACACTGTGCACGACATTGTCAACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067284.10 ENSMUST00000221042.2 ENSMUST00000221145.2 ENSMUST00000222968.2 |
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| CDS CCA 72 bp | TTGCAGAATCTTGCTTCTCGCTCTTCACGCTTCTCATaGATATGGGTCCCATACGTAGACTCAATGATCAGG | + |
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Preference number: 6 (lower is better) Translates to: LQNLASRSSRFS*IWVPYVDSMIR Trigger: CCTGATCATTGAGTCTACGTATGGGACCCATATCCATGAGAAGCGTGAAGAGCGAGAAGCAAGATTCTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067284.10 ENSMUST00000221042.2 ENSMUST00000221145.2 ENSMUST00000222968.2 |
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| CDS CCA 72 bp | TCCTCTTATCTGTACACCAGCTTTCAAACAGCTCTCTaGATAAGCCGTTTTGAATCATGCCTGGTGAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: SSYLYTSFQTAL*ISRFESCLVRP Trigger: TGGCCTCACCAGGCATGATTCAAAACGGCTTATCCAGAGAGCTGTTTGAAAGCTGGTGTACAGATAAGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067284.10 ENSMUST00000222968.2 |
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| CDS CCA 72 bp | AATCTTGCTTCTCGCTCTTCACGCTTCTCATGGATATaGGTCCCATACGTAGACTCAATGATCAGGATGTCT | + |
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Preference number: 6 (lower is better) Translates to: NLASRSSRFSWI*VPYVDSMIRMS Trigger: AGACATCCTGATCATTGAGTCTACGTATGGGACCCATATCCATGAGAAGCGTGAAGAGCGAGAAGCAAGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067284.10 ENSMUST00000221042.2 ENSMUST00000221145.2 ENSMUST00000222968.2 |
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| CDS GCA 72 bp | AACTTCATCATTATCTTCATATTCTCGGATCAGCGCTaGTTTCAGCCTGGCCATTTCATTCTGTTCCCCATG | + |
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Preference number: 6 (lower is better) Translates to: NFIIIFIFSDQR*FQPGHFILFPM Trigger: CATGGGGAACAGAATGAAATGGCCAGGCTGAAAGCAGCGCTGATCCGAGAATATGAAGATAATGATGAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067284.10 ENSMUST00000222968.2 |
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| CDS CCA 72 bp | TATCTTCATATTCTCGGATCAGCGCTGCTTTCAGCCTaGCCATTTCATTCTGTTCCCCATGGACTAAAATCA | + |
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Preference number: 6 (lower is better) Translates to: YLHILGSALLSA*PFHSVPHGLKS Trigger: TGATTTTAGTCCATGGGGAACAGAATGAAATGGCCAGGCTGAAAGCAGCGCTGATCCGAGAATATGAAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067284.10 ENSMUST00000222968.2 |
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| CDS CAA 72 bp | GGGTGGATCCCACAGTCCAGCATGATTTTCCTTCCTTaGAACTCCAGAATAATACATGATCTTCCCACTTCT | + |
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Preference number: 6 (lower is better) Translates to: GWIPQSSMIFLP*NSRIIHDLPTS Trigger: AGAAGTGGGAAGATCATGTATTATTCTGGAGTTCAAAGGAAGGAAAATCATGCTGGACTGTGGGATCCACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067284.10 ENSMUST00000221145.2 ENSMUST00000221507.2 ENSMUST00000222968.2 |
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| CDS TCA 72 bp | GTCATCTGCCGATATGTTGCTGACTTTGACATAGTCTaGGAGAAGCCATCTATAAATAGCTTTTGTGGCGTG | + |
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Preference number: 6 (lower is better) Translates to: VICRYVADFDIV*EKPSINSFCGV Trigger: CACGCCACAAAAGCTATTTATAGATGGCTTCTCTCAGACTATGTCAAAGTCAGCAACATATCGGCAGATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000067284.10 ENSMUST00000221042.2 ENSMUST00000221145.2 ENSMUST00000221507.2 ENSMUST00000222968.2 |
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