Pregenerated sensors for CPSF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041781Ensembl transcript IDs: ENSMUST00000047357.10
Found 178 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCTTGGAACAAGGGACCTGCAGAGGACACCAATCCCCTTGGCTCTaGGCCTGTCTCTTCGTTGGGCCTCTAGCATTCAGAGCTAGGCAA | + |
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Preference number: 1 (lower is better) Translates to: LLEQGTCRGHQSPWL*ACLFVGPLAFRARQ Trigger: TTGCCTAGCTCTGAATGCTAGAGGCCCAACGAAGAGACAGGCCCAGAGCCAAGGGGATTGGTGTCCTCTGCAGGTCCCTTGTTCCAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR TCA 90 bp | TTGAAGCAGGGTCGTATGTGGTCCAGACTGGCCTTCAGCCAAGTTTaGATGAAGTTGATGAAATTACAGGTATGTGCCACCGTGCCGTGC | + |
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Preference number: 1 (lower is better) Translates to: LKQGRMWSRLAFSQV*MKLMKLQVCATVPC Trigger: GCACGGCACGGTGGCACATACCTGTAATTTCATCAACTTCATTCAAACTTGGCTGAAGGCCAGTCTGGACCACATACGACCCTGCTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR GCA 90 bp | ACCCTTCCTTACACATACGCTGATCGGAACAGGAAACAGTACAGCTaGTTCACAAGTCAGCAGCTCCTTAGATGGTTAAGCAAAGTTACC | + |
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Preference number: 1 (lower is better) Translates to: TLPYTYADRNRKQYS*FTSQQLLRWLSKVT Trigger: GGTAACTTTGCTTAACCATCTAAGGAGCTGCTGACTTGTGAAGCAGCTGTACTGTTTCCTGTTCCGATCAGCGTATGTGTAAGGAAGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR CCA 90 bp | AACAGGAAACAGTACAGCTGCTTCACAAGTCAGCAGCTCCTTAGATaGTTAAGCAAAGTTACCACATGGCCCAACAATCCTATTCTTAAG | + |
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Preference number: 1 (lower is better) Translates to: NRKQYSCFTSQQLLR*LSKVTTWPNNPILK Trigger: CTTAAGAATAGGATTGTTGGGCCATGTGGTAACTTTGCTTAACCATCTAAGGAGCTGCTGACTTGTGAAGCAGCTGTACTGTTTCCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR TCA 90 bp | AGACCACTGGGAACCACTCAGTGTACATCAGCTGACAAGCAGACATaGTATCCAAGCAAAGGAGTGTCATATAACTACAAAATGGATACT | + |
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Preference number: 1 (lower is better) Translates to: RPLGTTQCTSADKQT*YPSKGVSYNYKMDT Trigger: AGTATCCATTTTGTAGTTATATGACACTCCTTTGCTTGGATATCATGTCTGCTTGTCAGCTGATGTACACTGAGTGGTTCCCAGTGGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR GCA 90 bp | GGCCTTCAGCCAAGTTTGAATGAAGTTGATGAAATTACAGGTATGTaGCACCGTGCCGTGCCCAGATACAATTTCTTTATAAGAAAACTA | + |
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Preference number: 1 (lower is better) Translates to: GLQPSLNEVDEITGM*HRAVPRYNFFIRKL Trigger: TAGTTTTCTTATAAAGAAATTGTATCTGGGCACGGCACGGTGGCACATACCTGTAATTTCATCAACTTCATTCAAACTTGGCTGAAGGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR TCA 90 bp | CACACCCTGTGTTTATTCTTGCATCTGAGACTCTCTCTGCTCTCATaGCTTATCTCACTGTTGTCTTTAGAAGTCATGCTTTTCTTAAGT | + |
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Preference number: 1 (lower is better) Translates to: HTLCLFLHLRLSLLS*LISLLSLEVMLFLS Trigger: ACTTAAGAAAAGCATGACTTCTAAAGACAACAGTGAGATAAGTCATGAGAGCAGAGAGAGTCTCAGATGCAAGAATAAACACAGGGTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR CAA 90 bp | CTAAATAAAATATGTACAGACCTGGTAACACAGCAGGCTCTCCTCTaGCTGGCTGAGACAGGCTCTAACCATGCAGCTCAGGCTGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: LNKICTDLVTQQALL*LAETGSNHAAQAGL Trigger: GAGGCCAGCCTGAGCTGCATGGTTAGAGCCTGTCTCAGCCAGCAAGAGGAGAGCCTGCTGTGTTACCAGGTCTGTACATATTTTATTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR CAA 90 bp | TTTGAAGCAGGGTCGTATGTGGTCCAGACTGGCCTTCAGCCAAGTTaGAATGAAGTTGATGAAATTACAGGTATGTGCCACCGTGCCGTG | + |
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Preference number: 2 (lower is better) Translates to: FEAGSYVVQTGLQPS*NEVDEITGMCHRAV Trigger: CACGGCACGGTGGCACATACCTGTAATTTCATCAACTTCATTCAAACTTGGCTGAAGGCCAGTCTGGACCACATACGACCCTGCTTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR-3UTR TCA 90 bp | GTGTTTATTCTTGCATCTGAGACTCTCTCTGCTCTCATGACTTATCTCACTGTTCCTACACCAGCCTCCTaGGTGCTGGGATTAGAAGCG | + |
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Preference number: 2 (lower is better) Translates to: VFILASETLSALMTYLTVPTPAS*VLGLEA Trigger: CGCTTCTAATCCCAGCACTCAGGAGGCTGGTGTAGG...AACAGTGAGATAAGTCATGAGAGCAGAGAGAGTCTCAGATGCAAGAATAAACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR-3UTR TCA 90 bp | CGGAACAGGAAACAGTACAGCTGCTTCACAAGTCAGCAGCTCCTTAGATGGTTACCTTTCTCCTTCTTTTaGAGCAGGGTCGTATGTGGT | + |
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Preference number: 2 (lower is better) Translates to: RNRKQYSCFTSQQLLRWLPFSFF*SRVVCG Trigger: ACCACATACGACCCTGCTTCAAAAGAAGGAGAAAGG...TAACCATCTAAGGAGCTGCTGACTTGTGAAGCAGCTGTACTGTTTCCTGTTCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR-3UTR GCA 90 bp | ATAACTACAAAATGGATACTGAAGTATACGCCTACAATCCCAGTACACCAGAGGTGTACTGCCTCCCACTaGACAGGTAGAGAGGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: ITTKWILKYTPTIPVHQRCTASH*TGREGS Trigger: GGAGCCCTCTCTACCTGTGCAGTGGGAGGCAGTACA...CCTCTGGTGTACTGGGATTGTAGGCGTATACTTCAGTATCCATTTTGTAGTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR-3UTR CCA 90 bp | CTTCCCCTGGAATGGAAATATAATTATAGGCCTCCTCTATCTAGTAACAGGAGTCAATCCCCTTGGCTCTaGGCCTGTCTCTTCGTTGGG | + |
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Preference number: 2 (lower is better) Translates to: LPLEWKYNYRPPLSSNRSQSPWL*ACLFVG Trigger: CCCAACGAAGAGACAGGCCCAGAGCCAAGGGGATTG...ACTCCTGTTACTAGATAGAGGAGGCCTATAATTATATTTCCATTCCAGGGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR CAA 90 bp | TTTTCTTTCTTTCTTTATTCAGGACAGAGAATCAAACCTAGGGCCTaGCACATGCTAGGCAAGAGCTCTACCACTGAGCTACACCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: FSFFLYSGQRIKPRA*HMLGKSSTTELHPR Trigger: CCTGGGGTGTAGCTCAGTGGTAGAGCTCTTGCCTAGCATGTGCAAGGCCCTAGGTTTGATTCTCTGTCCTGAATAAAGAAAGAAAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR-3UTR GCA 90 bp | ATAACTACAAAATGGATACTGAAGTATACGCCTACAATCCCAGTACACCAGAGGAGCAGGCTCTCCTCTTaGTGGCTGAGACAGGCTCTA | + |
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Preference number: 2 (lower is better) Translates to: ITTKWILKYTPTIPVHQRSRLSS*WLRQAL Trigger: TAGAGCCTGTCTCAGCCAGCAAGAGGAGAGCCTGCT...CCTCTGGTGTACTGGGATTGTAGGCGTATACTTCAGTATCCATTTTGTAGTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR-3UTR CCA 90 bp | CTAAAAATTAGTCTGGGAAACTACAACAGGACAGCATGGTTCATTGTTCAAGTCAGGCTCTCCTCTTGCTaGCTGAGACAGGCTCTAACC | + |
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Preference number: 2 (lower is better) Translates to: LKISLGNYNRTAWFIVQVRLSSC*LRQALT Trigger: GGTTAGAGCCTGTCTCAGCCAGCAAGAGGAGAGCCT...GACTTGAACAATGAACCATGCTGTCCTGTTGTAGTTTCCCAGACTAATTTTTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR-3UTR CCA 90 bp | CAAAAGGCTACGTGTTACATGATTCTTTATAAAATGTCTGGAAGAGACAGGAAGGGCCTGTCTCTTCGTTaGGCCTCTAGCATTCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: QKATCYMILYKMSGRDRKGLSLR*ASSIQS Trigger: GCTCTGAATGCTAGAGGCCCAACGAAGAGACAGGCC...CTTCCTGTCTCTTCCAGACATTTTATAAAGAATCATGTAACACGTAGCCTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR-3UTR GCA 90 bp | CGGAACAGGAAACAGTACAGCTGCTTCACAAGTCAGCAGCTCCTTAGATGGTTATCAAAATCTAGTACATaGTCACGTTTTCTGGCAGAT | + |
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Preference number: 2 (lower is better) Translates to: RNRKQYSCFTSQQLLRWLSKSST*SRFLAD Trigger: ATCTGCCAGAAAACGTGAGCATGTACTAGATTTTGA...TAACCATCTAAGGAGCTGCTGACTTGTGAAGCAGCTGTACTGTTTCCTGTTCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR CAA 90 bp | AGTGCTAAGTGTAGAGAAGACGGCTTCCACGTAAGGCATCAAGGATaGCCTTGTTCATGCTACTTTCTAAAAATTAGTCTGGGAAACTAC | + |
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Preference number: 2 (lower is better) Translates to: SAKCREDGFHVRHQG*PCSCYFLKISLGNY Trigger: GTAGTTTCCCAGACTAATTTTTAGAAAGTAGCATGAACAAGGCAATCCTTGATGCCTTACGTGGAAGCCGTCTTCTCTACACTTAGCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR-3UTR TCA 90 bp | ATAACTACAAAATGGATACTGAAGTATACGCCTACAATCCCAGTACACCAGAGGAGAATCCTTTCTTCCTaGGAAAGGTCAAGCAGACAC | + |
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Preference number: 2 (lower is better) Translates to: ITTKWILKYTPTIPVHQRRILSS*ERSSRH Trigger: GTGTCTGCTTGACCTTTCTCAGGAAGAAAGGATTCT...CCTCTGGTGTACTGGGATTGTAGGCGTATACTTCAGTATCCATTTTGTAGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR-3UTR GCA 90 bp | CAAAAGGCTACGTGTTACATGATTCTTTATAAAATGTCTGGAAGAGACAGGAAGTGTGCCACCGTGCCGTaGCCAGATACAATTTCTTTA | + |
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Preference number: 2 (lower is better) Translates to: QKATCYMILYKMSGRDRKCATVP*PDTISL Trigger: TAAAGAAATTGTATCTGGGCACGGCACGGTGGCACA...CTTCCTGTCTCTTCCAGACATTTTATAAAGAATCATGTAACACGTAGCCTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR CAA 90 bp | CACACAAATGTGCACACACCAGTTTCTGTAAGGCCATCAACAGGTTaGCTAAGTTGCACTGTTCTTTTGTTTGTTTGTTTGTTTTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: HTNVHTPVSVRPSTG*LSCTVLLFVCLFSP Trigger: AGGAGAAAACAAACAAACAAACAAAAGAACAGTGCAACTTAGCAAACCTGTTGATGGCCTTACAGAAACTGGTGTGTGCACATTTGTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR-3UTR TCA 90 bp | GGATTTCTTCCCCTGGAATGGAAATATAATTATAGGCCTCCTCTATCTAGTAACAAGTTTAGCCTCAGATaGGAATCCTTTCTTCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: GFLPLEWKYNYRPPLSSNKFSLR*ESFLPE Trigger: CTCAGGAAGAAAGGATTCTCATCTGAGGCTAAACTT...GTTACTAGATAGAGGAGGCCTATAATTATATTTCCATTCCAGGGGAAGAAATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR-3UTR CCA 90 bp | TGTTTCATGGCTGATAAAAGGACAATACGCTCTTTACACTCATCTCTGCAACACAAAAAGACCGAGCATTaGATGGTTTCAGAGACAGTT | + |
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Preference number: 2 (lower is better) Translates to: CFMADKRTIRSLHSSLQHKKTEH*MVSETV Trigger: AACTGTCTCTGAAACCATCCAATGCTCGGTCTTTTT...GTGTTGCAGAGATGAGTGTAAAGAGCGTATTGTCCTTTTATCAGCCATGAAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR-3UTR CCA 90 bp | CTTCCCCTGGAATGGAAATATAATTATAGGCCTCCTCTATCTAGTAACAGGAGTTACAACAGGACAGCATaGTTCATTGTTCAAGTCAAC | + |
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Preference number: 2 (lower is better) Translates to: LPLEWKYNYRPPLSSNRSYNRTA*FIVQVN Trigger: GTTGACTTGAACAATGAACCATGCTGTCCTGTTGTA...ACTCCTGTTACTAGATAGAGGAGGCCTATAATTATATTTCCATTCCAGGGGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR-3UTR GCA 90 bp | CAAAAGGCTACGTGTTACATGATTCTTTATAAAATGTCTGGAAGAGACAGGAAGCACAGGCAGTTGGATTaGTCTCCAATGACATTATTG | + |
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Preference number: 2 (lower is better) Translates to: QKATCYMILYKMSGRDRKHRQLD*SPMTLL Trigger: CAATAATGTCATTGGAGAGCAATCCAACTGCCTGTG...CTTCCTGTCTCTTCCAGACATTTTATAAAGAATCATGTAACACGTAGCCTTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR-3UTR CCA 90 bp | ATAACTACAAAATGGATACTGAAGTATACGCCTACAATCCCAGTACACCAGAGGCATGCTCACGTTTTCTaGCAGATTCTTTTTGTATGT | + |
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Preference number: 2 (lower is better) Translates to: ITTKWILKYTPTIPVHQRHAHVF*QILFVC Trigger: ACATACAAAAAGAATCTGCCAGAAAACGTGAGCATG...CCTCTGGTGTACTGGGATTGTAGGCGTATACTTCAGTATCCATTTTGTAGTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR CAA 90 bp | CTCCATTTCAGGAATTTTTGGATGATGTCATCTAGACACAGGCAGTaGGATTGCTCTCCAATGACATTATTGTACAACAATCATCTTCAA | + |
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Preference number: 2 (lower is better) Translates to: LHFRNFWMMSSRHRQ*DCSPMTLLYNNHLQ Trigger: TTGAAGATGATTGTTGTACAATAATGTCATTGGAGAGCAATCCAACTGCCTGTGTCTAGATGACATCATCCAAAAATTCCTGAAATGGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR-3UTR GCA 90 bp | GTGTTTATTCTTGCATCTGAGACTCTCTCTGCTCTCATGACTTATCTCACTGTTACAGGTTTGCTAAGTTaGACTGTTCTTTTGTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: VFILASETLSALMTYLTVTGLLS*TVLLFV Trigger: AACAAACAAAAGAACAGTGCAACTTAGCAAACCTGT...AACAGTGAGATAAGTCATGAGAGCAGAGAGAGTCTCAGATGCAAGAATAAACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR-3UTR GCA 90 bp | GTGTTTATTCTTGCATCTGAGACTCTCTCTGCTCTCATGACTTATCTCACTGTTTGCAACACTATTTTGTaGATCTGGTTTTCAGTATCA | + |
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Preference number: 2 (lower is better) Translates to: VFILASETLSALMTYLTVCNTIL*IWFSVS Trigger: TGATACTGAAAACCAGATGCACAAAATAGTGTTGCA...AACAGTGAGATAAGTCATGAGAGCAGAGAGAGTCTCAGATGCAAGAATAAACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR-3UTR CCA 90 bp | GTGTTTATTCTTGCATCTGAGACTCTCTCTGCTCTCATGACTTATCTCACTGTTAAGAGGAATGTTTCATaGCTGATAAAAGGACAATAC | + |
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Preference number: 2 (lower is better) Translates to: VFILASETLSALMTYLTVKRNVS*LIKGQY Trigger: GTATTGTCCTTTTATCAGCCATGAAACATTCCTCTT...AACAGTGAGATAAGTCATGAGAGCAGAGAGAGTCTCAGATGCAAGAATAAACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR-3UTR CCA 90 bp | GTGTTTATTCTTGCATCTGAGACTCTCTCTGCTCTCATGACTTATCTCACTGTTCATTTCAGGAATTTTTaGATGATGTCATCTAGACAC | + |
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Preference number: 2 (lower is better) Translates to: VFILASETLSALMTYLTVHFRNF*MMSSRH Trigger: GTGTCTAGATGACATCATCCAAAAATTCCTGAAATG...AACAGTGAGATAAGTCATGAGAGCAGAGAGAGTCTCAGATGCAAGAATAAACAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR CCA 72 bp | CAAGGGACCTGCAGAGGACACCAATCCCCTTGGCTCTaGGCCTGTCTCTTCGTTGGGCCTCTAGCATTCAGA | + |
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Preference number: 3 (lower is better) Translates to: QGTCRGHQSPWL*ACLFVGPLAFR Trigger: TCTGAATGCTAGAGGCCCAACGAAGAGACAGGCCCAGAGCCAAGGGGATTGGTGTCCTCTGCAGGTCCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR-3UTR CAA 90 bp | GCTCTAACCATGCAGCTCAGGCTGGCCTCTAATTCACAGTCCTCCTACACCAGCAGGCCATCAACAGGTTaGCTAAGTTGCACTGTTCTT | + |
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Preference number: 3 (lower is better) Translates to: ALTMQLRLASNSQSSYTSRPSTG*LSCTVL Trigger: AAGAACAGTGCAACTTAGCAAACCTGTTGATGGCCT...GCTGGTGTAGGAGGACTGTGAATTAGAGGCCAGCCTGAGCTGCATGGTTAGAGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR TCA 72 bp | GCCAAGACCACTGGGAACCACTCAGTGTACATCAGCTaGCAAGCAGACATGATATCCAAGCAAAGGAGTGTC | + |
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Preference number: 3 (lower is better) Translates to: AKTTGNHSVYIS*QADMISKQRSV Trigger: GACACTCCTTTGCTTGGATATCATGTCTGCTTGTCAGCTGATGTACACTGAGTGGTTCCCAGTGGTCTTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR-3UTR CAA 90 bp | TGTTTCATGGCTGATAAAAGGACAATACGCTCTTTACACTCATCTCTGCAACACCAGCAGGCTCTCCTCTaGCTGGCTGAGACAGGCTCT | + |
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Preference number: 3 (lower is better) Translates to: CFMADKRTIRSLHSSLQHQQALL*LAETGS Trigger: AGAGCCTGTCTCAGCCAGCAAGAGGAGAGCCTGCTG...GTGTTGCAGAGATGAGTGTAAAGAGCGTATTGTCCTTTTATCAGCCATGAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR-3UTR CAA 90 bp | CGGAACAGGAAACAGTACAGCTGCTTCACAAGTCAGCAGCTCCTTAGATGGTTACCCTTTCTCCTTCTTTaGAAGCAGGGTCGTATGTGG | + |
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Preference number: 3 (lower is better) Translates to: RNRKQYSCFTSQQLLRWLPFLLL*KQGRMW Trigger: CCACATACGACCCTGCTTCAAAAGAAGGAGAAAGGG...TAACCATCTAAGGAGCTGCTGACTTGTGAAGCAGCTGTACTGTTTCCTGTTCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR-3UTR CAA 90 bp | GGATTTCTTCCCCTGGAATGGAAATATAATTATAGGCCTCCTCTATCTAGTAACAGGACACCAATCCCCTaGGCTCTGGGCCTGTCTCTT | + |
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Preference number: 3 (lower is better) Translates to: GFLPLEWKYNYRPPLSSNRTPIP*ALGLSL Trigger: AAGAGACAGGCCCAGAGCCAAGGGGATTGGTGTCCT...GTTACTAGATAGAGGAGGCCTATAATTATATTTCCATTCCAGGGGAAGAAATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR TCA 72 bp | GGTCGTATGTGGTCCAGACTGGCCTTCAGCCAAGTTTaGATGAAGTTGATGAAATTACAGGTATGTGCCACC | + |
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Preference number: 3 (lower is better) Translates to: GRMWSRLAFSQV*MKLMKLQVCAT Trigger: GGTGGCACATACCTGTAATTTCATCAACTTCATTCAAACTTGGCTGAAGGCCAGTCTGGACCACATACGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR CCA 72 bp | CAGTACAGCTGCTTCACAAGTCAGCAGCTCCTTAGATaGTTAAGCAAAGTTACCACATGGCCCAACAATCCT | + |
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Preference number: 3 (lower is better) Translates to: QYSCFTSQQLLR*LSKVTTWPNNP Trigger: AGGATTGTTGGGCCATGTGGTAACTTTGCTTAACCATCTAAGGAGCTGCTGACTTGTGAAGCAGCTGTACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR TCA 72 bp | GACTGGTGTCTCACACCCTGTGTTTATTCTTGCATCTaGGACTCTCTCTGCTCTCATGACTTATCTCACTGT | + |
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Preference number: 3 (lower is better) Translates to: DWCLTPCVYSCI*DSLCSHDLSHC Trigger: ACAGTGAGATAAGTCATGAGAGCAGAGAGAGTCTCAGATGCAAGAATAAACACAGGGTGTGAGACACCAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR CCA 72 bp | GTTCAAAGCAACATTCTTTATAGCAGCCAAGACCACTaGGAACCACTCAGTGTACATCAGCTGACAAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: VQSNILYSSQDH*EPLSVHQLTSR Trigger: TCTGCTTGTCAGCTGATGTACACTGAGTGGTTCCCAGTGGTCTTGGCTGCTATAAAGAATGTTGCTTTGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR CCA 72 bp | CAGCAGCTCCTTAGATGGTTAAGCAAAGTTACCACATaGCCCAACAATCCTATTCTTAAGCACACACGCAAG | + |
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Preference number: 3 (lower is better) Translates to: QQLLRWLSKVTT*PNNPILKHTRK Trigger: CTTGCGTGTGTGCTTAAGAATAGGATTGTTGGGCCATGTGGTAACTTTGCTTAACCATCTAAGGAGCTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR-3UTR CAA 90 bp | GGATTTCTTCCCCTGGAATGGAAATATAATTATAGGCCTCCTCTATCTAGTAACATCAAACCTAGGGCCTaGCACATGCTAGGCAAGAGC | + |
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Preference number: 3 (lower is better) Translates to: GFLPLEWKYNYRPPLSSNIKPRA*HMLGKS Trigger: GCTCTTGCCTAGCATGTGCAAGGCCCTAGGTTTGAT...GTTACTAGATAGAGGAGGCCTATAATTATATTTCCATTCCAGGGGAAGAAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR-3UTR CAA 90 bp | ATAACTACAAAATGGATACTGAAGTATACGCCTACAATCCCAGTACACCAGAGGTCCAACAGAATTCATTaGTACTGTATCGAGGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: ITTKWILKYTPTIPVHQRSNRIH*YCIEGG Trigger: GCCACCCTCGATACAGTACAAATGAATTCTGTTGGA...CCTCTGGTGTACTGGGATTGTAGGCGTATACTTCAGTATCCATTTTGTAGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR-3UTR CAA 90 bp | ATAACTACAAAATGGATACTGAAGTATACGCCTACAATCCCAGTACACCAGAGGACCCTGTGTTTATTCTaGCATCTGAGACTCTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: ITTKWILKYTPTIPVHQRTLCLF*HLRLSL Trigger: CAGAGAGAGTCTCAGATGCAAGAATAAACACAGGGT...CCTCTGGTGTACTGGGATTGTAGGCGTATACTTCAGTATCCATTTTGTAGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| 3UTR TCA 72 bp | GGAACCACTCAGTGTACATCAGCTGACAAGCAGACATaGTATCCAAGCAAAGGAGTGTCATATAACTACAAA | + |
|
Preference number: 3 (lower is better) Translates to: GTTQCTSADKQT*YPSKGVSYNYK Trigger: TTTGTAGTTATATGACACTCCTTTGCTTGGATATCATGTCTGCTTGTCAGCTGATGTACACTGAGTGGTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTTATTCTTGCATCTGAGACTCTCTCTGCTCTCATGACTTATCTCACTGTTTGCGAGCTTCCACATTaGCTTTTTAAAAAGACCGAG | + |
|
Preference number: 3 (lower is better) Translates to: VFILASETLSALMTYLTVCELPH*LFKKTE Trigger: CTCGGTCTTTTTAAAAAGCAAATGTGGAAGCTCGCA...AACAGTGAGATAAGTCATGAGAGCAGAGAGAGTCTCAGATGCAAGAATAAACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| 3UTR-3UTR CAA 90 bp | TGTTTCATGGCTGATAAAAGGACAATACGCTCTTTACACTCATCTCTGCAACACGGACAGCATGGTTCATaGTTCAAGTCAACAGAATTA | + |
|
Preference number: 3 (lower is better) Translates to: CFMADKRTIRSLHSSLQHGQHGS*FKSTEL Trigger: TAATTCTGTTGACTTGAACAATGAACCATGCTGTCC...GTGTTGCAGAGATGAGTGTAAAGAGCGTATTGTCCTTTTATCAGCCATGAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| 3UTR GCA 72 bp | GAGGATTATGAGTTTGAACCAGCTTTAGCTACACAATaGAAGACTACATCCCGAAGCAAACAAGAATTATGC | + |
|
Preference number: 3 (lower is better) Translates to: EDYEFEPALATQ*KTTSRSKQELC Trigger: GCATAATTCTTGTTTGCTTCGGGATGTAGTCTTGCATTGTGTAGCTAAAGCTGGTTCAAACTCATAATCCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| 3UTR TCA 72 bp | TGTTTATTCTTGCATCTGAGACTCTCTCTGCTCTCATaGCTTATCTCACTGTTGTCTTTAGAAGTCATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: CLFLHLRLSLLS*LISLLSLEVML Trigger: AAGCATGACTTCTAAAGACAACAGTGAGATAAGTCATGAGAGCAGAGAGAGTCTCAGATGCAAGAATAAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| 3UTR GCA 72 bp | CCAGTTTCTGTAAGGCCATCAACAGGTTTGCTAAGTTaGACTGTTCTTTTGTTTGTTTGTTTGTTTTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PVSVRPSTGLLS*TVLLFVCLFSP Trigger: AGGAGAAAACAAACAAACAAACAAAAGAACAGTGCAACTTAGCAAACCTGTTGATGGCCTTACAGAAACTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| 3UTR CCA 72 bp | GATATCCAAGCAAAGGAGTGTCATATAACTACAAAATaGATACTGAAGTATACGCCTACAATCCCAGTACAC | + |
|
Preference number: 3 (lower is better) Translates to: DIQAKECHITTK*ILKYTPTIPVH Trigger: GTGTACTGGGATTGTAGGCGTATACTTCAGTATCCATTTTGTAGTTATATGACACTCCTTTGCTTGGATATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| 3UTR TCA 72 bp | TGTCATCTAGACACAGGCAGTTGGATTGCTCTCCAATaGCATTATTGTACAACAATCATCTTCAAGGAATAT | + |
|
Preference number: 3 (lower is better) Translates to: CHLDTGSWIALQ*HYCTTIIFKEY Trigger: ATATTCCTTGAAGATGATTGTTGTACAATAATGTCATTGGAGAGCAATCCAACTGCCTGTGTCTAGATGACA 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| 3UTR GCA 72 bp | TTTTGGATGATGTCATCTAGACACAGGCAGTTGGATTaGTCTCCAATGACATTATTGTACAACAATCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: FWMMSSRHRQLD*SPMTLLYNNHL Trigger: AAGATGATTGTTGTACAATAATGTCATTGGAGAGCAATCCAACTGCCTGTGTCTAGATGACATCATCCAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| 3UTR-3UTR CAA 90 bp | CTATACAATTCTCCCTTCTTATTCCAGAAAACACAAGAAACTGTCCACACAAATAACAGGTTTGCTAAGTaGCACTGTTCTTTTGTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LYNSPFLFQKTQETVHTNNRFAK*HCSFVC Trigger: ACAAACAAAAGAACAGTGCAACTTAGCAAACCTGTT...ATTTGTGTGGACAGTTTCTTGTGTTTTCTGGAATAAGAAGGGAGAATTGTATAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR TCA 90 bp | GCTCTAACCATGCAGCTCAGGCTGGCCTCTAATTCACAGTCCTCCTACACCAGCACTTCTTGGCCTGTTTaGAGAAGCTCCCTTTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALTMQLRLASNSQSSYTSTSWPV*RSSLCG Trigger: GCCGCAAAGGGAGCTTCTTCAAACAGGCCAAGAAGT...GCTGGTGTAGGAGGACTGTGAATTAGAGGCCAGCCTGAGCTGCATGGTTAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CCA 90 bp | GCTCTAACCATGCAGCTCAGGCTGGCCTCTAATTCACAGTCCTCCTACACCAGCTTCATGGCCTTCTGCTaGGCCATGGCACTAGAATCG | + |
|
Preference number: 4 (lower is better) Translates to: ALTMQLRLASNSQSSYTSFMAFC*AMALES Trigger: CGATTCTAGTGCCATGGCCCAGCAGAAGGCCATGAA...GCTGGTGTAGGAGGACTGTGAATTAGAGGCCAGCCTGAGCTGCATGGTTAGAGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CCA 90 bp | TCTCCTTTTTCTTCTTCAAGTAATGAGCTCTTGGAACAAGGGACCTGCAGAGGACTTCCCCACGGCGAATaGGAGGGCACCGAGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPFSSSSNELLEQGTCRGLPHGE*EGTEVE Trigger: CTCCACCTCGGTGCCCTCCCATTCGCCGTGGGGAAG...TCCTCTGCAGGTCCCTTGTTCCAAGAGCTCATTACTTGAAGAAGAAAAAGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR TCA 90 bp | CCACGAGGAGCAGAGCTCACAGGAGCAGCCGCACGTCACCCCTTCTCAAGAAAATCTTCTTCAGTAGCCTaGAGTTCTGGCACTAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PRGAELTGAAARHPFSRKSSSVA*SSGTKK Trigger: TTTCTTAGTGCCAGAACTTCAGGCTACTGAAGAAGA...TTTTCTTGAGAAGGGGTGACGTGCGGCTGCTCCTGTGAGCTCTGCTCCTCGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CCA 90 bp | GCTCTAACCATGCAGCTCAGGCTGGCCTCTAATTCACAGTCCTCCTACACCAGCTATCATATGACCAGCTaGCAGGGGTGTGATAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: ALTMQLRLASNSQSSYTSYHMTS*QGCDRQ Trigger: TTGTCTATCACACCCCTGCCAGCTGGTCATATGATA...GCTGGTGTAGGAGGACTGTGAATTAGAGGCCAGCCTGAGCTGCATGGTTAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CCA 90 bp | ATTCTCCCTTCTTATTCCAGAAAACACAAGAAACTGTCCACACAAATGTGCACACGGCCAGATCCTGGCTaGCCTCTGGTGGGCCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ILPSYSRKHKKLSTQMCTRPDPG*PLVGRG Trigger: TCCACGGCCCACCAGAGGCCAGCCAGGATCTGGCCG...TGTGCACATTTGTGTGGACAGTTTCTTGTGTTTTCTGGAATAAGAAGGGAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CCA 90 bp | TCTCCTTTTTCTTCTTCAAGTAATGAGCTCTTGGAACAAGGGACCTGCAGAGGAAGGAACCTCGTGAGGTaGCAAAGGCTCCAGCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPFSSSSNELLEQGTCRGRNLVR*QRLQRG Trigger: CCCACGCTGGAGCCTTTGCCACCTCACGAGGTTCCT...TCCTCTGCAGGTCCCTTGTTCCAAGAGCTCATTACTTGAAGAAGAAAAAGGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR TCA 90 bp | GCTCTAACCATGCAGCTCAGGCTGGCCTCTAATTCACAGTCCTCCTACACCAGCAGAACTGAAGGGAGCTaGCAAGTGAGTCTTTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: ALTMQLRLASNSQSSYTSRTEGS*QVSLLI Trigger: GATTAAAAGACTCACTTGTCAGCTCCCTTCAGTTCT...GCTGGTGTAGGAGGACTGTGAATTAGAGGCCAGCCTGAGCTGCATGGTTAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CCA 90 bp | CGGAACAGGAAACAGTACAGCTGCTTCACAAGTCAGCAGCTCCTTAGATGGTTACACTCCAGGTCAGGCTaGCTGGCAAGTACAACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RNRKQYSCFTSQQLLRWLHSRSG*LASTTL Trigger: CAAAGTTGTACTTGCCAGCCAGCCTGACCTGGAGTG...TAACCATCTAAGGAGCTGCTGACTTGTGAAGCAGCTGTACTGTTTCCTGTTCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CCA 90 bp | GCTCTAACCATGCAGCTCAGGCTGGCCTCTAATTCACAGTCCTCCTACACCAGCGGTCTCGTGCAGCTTTaGCATGTACACTTTAATATC | + |
|
Preference number: 4 (lower is better) Translates to: ALTMQLRLASNSQSSYTSGLVQL*HVHFNI Trigger: GATATTAAAGTGTACATGCCAAAGCTGCACGAGACC...GCTGGTGTAGGAGGACTGTGAATTAGAGGCCAGCCTGAGCTGCATGGTTAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR TCA 90 bp | ATTCTCCCTTCTTATTCCAGAAAACACAAGAAACTGTCCACACAAATGTGCACATGTCCAGGAACCTCGTaGGGTGGCAAAGGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ILPSYSRKHKKLSTQMCTCPGTS*GGKGSS Trigger: GCTGGAGCCTTTGCCACCTCACGAGGTTCCTGGACA...TGTGCACATTTGTGTGGACAGTTTCTTGTGTTTTCTGGAATAAGAAGGGAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CCA 90 bp | CTTCCCCTGGAATGGAAATATAATTATAGGCCTCCTCTATCTAGTAACAGGAGTGGCACCGAGGTGGAGTaGATCAGGATGAGACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPLEWKYNYRPPLSSNRSGTEVE*IRMRQE Trigger: CTCCTGTCTCATCCTGATCCACTCCACCTCGGTGCC...ACTCCTGTTACTAGATAGAGGAGGCCTATAATTATATTTCCATTCCAGGGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CCA 90 bp | ATAACTACAAAATGGATACTGAAGTATACGCCTACAATCCCAGTACACCAGAGGCCAGGTCAGGCTGGCTaGCAAGTACAACTTTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ITTKWILKYTPTIPVHQRPGQAG*QVQLWG Trigger: GCCCCAAAGTTGTACTTGCCAGCCAGCCTGACCTGG...CCTCTGGTGTACTGGGATTGTAGGCGTATACTTCAGTATCCATTTTGTAGTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CCA 90 bp | CGGAACAGGAAACAGTACAGCTGCTTCACAAGTCAGCAGCTCCTTAGATGGTTAGGCACTAGAATCGGATaGAGCATCCACTTGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: RNRKQYSCFTSQQLLRWLGTRIG*SIHLHF Trigger: GAAATGCAAGTGGATGCTCCATCCGATTCTAGTGCC...TAACCATCTAAGGAGCTGCTGACTTGTGAAGCAGCTGTACTGTTTCCTGTTCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR TCA 90 bp | ATAACTACAAAATGGATACTGAAGTATACGCCTACAATCCCAGTACACCAGAGGAGAGCGGACTCTTCTTaGACCCCAGAGAGGGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ITTKWILKYTPTIPVHQRRADSS*TPERVV Trigger: AACCACCCTCTCTGGGGTTCAAGAAGAGTCCGCTCT...CCTCTGGTGTACTGGGATTGTAGGCGTATACTTCAGTATCCATTTTGTAGTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR TCA 90 bp | CGGAACAGGAAACAGTACAGCTGCTTCACAAGTCAGCAGCTCCTTAGATGGTTACTTCTCCATCGTCCTTaGGCTCTCCTTCTTCTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RNRKQYSCFTSQQLLRWLLLHRP*ALLLLK Trigger: TTTTAGAAGAAGGAGAGCTCAAGGACGATGGAGAAG...TAACCATCTAAGGAGCTGCTGACTTGTGAAGCAGCTGTACTGTTTCCTGTTCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CCA 90 bp | CAAAAGGCTACGTGTTACATGATTCTTTATAAAATGTCTGGAAGAGACAGGAAGGCCTCTGGTGGGCCGTaGACAATGATGAGCTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: QKATCYMILYKMSGRDRKASGGP*TMMSCR Trigger: ACGGCAGCTCATCATTGTCCACGGCCCACCAGAGGC...CTTCCTGTCTCTTCCAGACATTTTATAAAGAATCATGTAACACGTAGCCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| 3UTR CAA 72 bp | GGGTCGTATGTGGTCCAGACTGGCCTTCAGCCAAGTTaGAATGAAGTTGATGAAATTACAGGTATGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GSYVVQTGLQPS*NEVDEITGMCH Trigger: GTGGCACATACCTGTAATTTCATCAACTTCATTCAAACTTGGCTGAAGGCCAGTCTGGACCACATACGACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR TCA 90 bp | ATTCTCCCTTCTTATTCCAGAAAACACAAGAAACTGTCCACACAAATGTGCACATGGAGTGGATCAGGATaGGACAGGAGCACTGCATCG | + |
|
Preference number: 4 (lower is better) Translates to: ILPSYSRKHKKLSTQMCTWSGSG*DRSTAS Trigger: CGATGCAGTGCTCCTGTCTCATCCTGATCCACTCCA...TGTGCACATTTGTGTGGACAGTTTCTTGTGTTTTCTGGAATAAGAAGGGAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR TCA 90 bp | CAAAAGGCTACGTGTTACATGATTCTTTATAAAATGTCTGGAAGAGACAGGAAGGTCCCTCCTATCATATaGCCAGCTGGCAGGGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QKATCYMILYKMSGRDRKVPPII*PAGRGV Trigger: CACACCCCTGCCAGCTGGTCATATGATAGGAGGGAC...CTTCCTGTCTCTTCCAGACATTTTATAAAGAATCATGTAACACGTAGCCTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR GCA 90 bp | TGTTTCATGGCTGATAAAAGGACAATACGCTCTTTACACTCATCTCTGCAACACAGCTGCTCATCTCTCTaGTTCCTTCTAGGCTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: CFMADKRTIRSLHSSLQHSCSSL*FLLGCT Trigger: CGTGCAGCCTAGAAGGAAGCAGAGAGATGAGCAGCT...GTGTTGCAGAGATGAGTGTAAAGAGCGTATTGTCCTTTTATCAGCCATGAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR GCA 90 bp | TGTTTCATGGCTGATAAAAGGACAATACGCTCTTTACACTCATCTCTGCAACACGCATCGACGGTCTCGTaGAGCTTTGGCATGTACACT | + |
|
Preference number: 4 (lower is better) Translates to: CFMADKRTIRSLHSSLQHASTVS*SFGMYT Trigger: AGTGTACATGCCAAAGCTGCACGAGACCGTCGATGC...GTGTTGCAGAGATGAGTGTAAAGAGCGTATTGTCCTTTTATCAGCCATGAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR GCA 90 bp | TCTCCTTTTTCTTCTTCAAGTAATGAGCTCTTGGAACAAGGGACCTGCAGAGGACTGCTACTTGATTGTTaGAGACAAGTACGCCCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: SPFSSSSNELLEQGTCRGLLLDC*RQVRPL Trigger: TAGGGGGCGTACTTGTCTGCAACAATCAAGTAGCAG...TCCTCTGCAGGTCCCTTGTTCCAAGAGCTCATTACTTGAAGAAGAAAAAGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| 3UTR CAA 72 bp | TTTCTTTATTCAGGACAGAGAATCAAACCTAGGGCCTaGCACATGCTAGGCAAGAGCTCTACCACTGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: FLYSGQRIKPRA*HMLGKSSTTEL Trigger: TAGCTCAGTGGTAGAGCTCTTGCCTAGCATGTGCAAGGCCCTAGGTTTGATTCTCTGTCCTGAATAAAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR GCA 90 bp | ATTCTCCCTTCTTATTCCAGAAAACACAAGAAACTGTCCACACAAATGTGCACACTCTTCATGGCCTTCTaGTGGGCCATGGCACTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ILPSYSRKHKKLSTQMCTLFMAF*WAMALE Trigger: TTCTAGTGCCATGGCCCAGCAGAAGGCCATGAAGAG...TGTGCACATTTGTGTGGACAGTTTCTTGTGTTTTCTGGAATAAGAAGGGAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CCA 90 bp | TGTTTCATGGCTGATAAAAGGACAATACGCTCTTTACACTCATCTCTGCAACACTGGCAAGTACAACTTTaGGGCTTGGAACTCGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CFMADKRTIRSLHSSLQHWQVQL*GLELEP Trigger: TGGCTCGAGTTCCAAGCCCCAAAGTTGTACTTGCCA...GTGTTGCAGAGATGAGTGTAAAGAGCGTATTGTCCTTTTATCAGCCATGAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CCA 90 bp | ATTCTCCCTTCTTATTCCAGAAAACACAAGAAACTGTCCACACAAATGTGCACACAAACAGACTCTTCATaGCCTTCTGCTGGGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: ILPSYSRKHKKLSTQMCTQTDSS*PSAGPW Trigger: CCATGGCCCAGCAGAAGGCCATGAAGAGTCTGTTTG...TGTGCACATTTGTGTGGACAGTTTCTTGTGTTTTCTGGAATAAGAAGGGAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR TCA 90 bp | GGATTTCTTCCCCTGGAATGGAAATATAATTATAGGCCTCCTCTATCTAGTAACCCTACAAATTCCGCTTaGATCCCCTCCCGCAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GFLPLEWKYNYRPPLSSNPTNSA*IPSRKR Trigger: TCTTTTGCGGGAGGGGATTCAAGCGGAATTTGTAGG...GTTACTAGATAGAGGAGGCCTATAATTATATTTCCATTCCAGGGGAAGAAATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CCA 90 bp | CTAAAAATTAGTCTGGGAAACTACAACAGGACAGCATGGTTCATTGTTCAAGTCTGGATCTCCCTCTTGTaGTTGAAGTCCACGGCATAC | + |
|
Preference number: 4 (lower is better) Translates to: LKISLGNYNRTAWFIVQVWISLL*LKSTAY Trigger: GTATGCCGTGGACTTCAACCACAAGAGGGAGATCCA...GACTTGAACAATGAACCATGCTGTCCTGTTGTAGTTTCCCAGACTAATTTTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CCA 90 bp | TCTCCTTTTTCTTCTTCAAGTAATGAGCTCTTGGAACAAGGGACCTGCAGAGGAGAACATCCATTTAAGTaGATCTCCCTCTTGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPFSSSSNELLEQGTCRGEHPFK*ISLLWL Trigger: CAACCACAAGAGGGAGATCCACTTAAATGGATGTTC...TCCTCTGCAGGTCCCTTGTTCCAAGAGCTCATTACTTGAAGAAGAAAAAGGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CCA 90 bp | CTTCCCCTGGAATGGAAATATAATTATAGGCCTCCTCTATCTAGTAACAGGAGTTACAACTTTGGGGCTTaGAACTCGAGCCAAGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPLEWKYNYRPPLSSNRSYNFGA*NSSQVR Trigger: TCTGACTTGGCTCGAGTTCCAAGCCCCAAAGTTGTA...ACTCCTGTTACTAGATAGAGGAGGCCTATAATTATATTTCCATTCCAGGGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CCA 90 bp | ATTCTCCCTTCTTATTCCAGAAAACACAAGAAACTGTCCACACAAATGTGCACAACAGGTCCTGGTCCATaGGTTCCTCTCCATTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILPSYSRKHKKLSTQMCTTGPGP*VPLHLS Trigger: TGACAAATGGAGAGGAACCCATGGACCAGGACCTGT...TGTGCACATTTGTGTGGACAGTTTCTTGTGTTTTCTGGAATAAGAAGGGAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR TCA 90 bp | CAAAAGGCTACGTGTTACATGATTCTTTATAAAATGTCTGGAAGAGACAGGAAGTCTCCCTCTTGTGGTTaGAGTCCACGGCATACACAA | + |
|
Preference number: 4 (lower is better) Translates to: QKATCYMILYKMSGRDRKSPSCG*SPRHTQ Trigger: TTGTGTATGCCGTGGACTTCAACCACAAGAGGGAGA...CTTCCTGTCTCTTCCAGACATTTTATAAAGAATCATGTAACACGTAGCCTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR TCA 90 bp | TGTTTCATGGCTGATAAAAGGACAATACGCTCTTTACACTCATCTCTGCAACACTTAGCTTTACAGAACTaGAGGGAGCTGACAAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CFMADKRTIRSLHSSLQHLALQN*RELTSE Trigger: CTCACTTGTCAGCTCCCTTCAGTTCTGTAAAGCTAA...GTGTTGCAGAGATGAGTGTAAAGAGCGTATTGTCCTTTTATCAGCCATGAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR GCA 90 bp | ATTCTCCCTTCTTATTCCAGAAAACACAAGAAACTGTCCACACAAATGTGCACAATGAGACAGGAGCACTaGATCGATCTGGTGAACATG | + |
|
Preference number: 4 (lower is better) Translates to: ILPSYSRKHKKLSTQMCTMRQEH*IDLVNM Trigger: CATGTTCACCAGATCGATGCAGTGCTCCTGTCTCAT...TGTGCACATTTGTGTGGACAGTTTCTTGTGTTTTCTGGAATAAGAAGGGAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR GCA 90 bp | ATTCTCCCTTCTTATTCCAGAAAACACAAGAAACTGTCCACACAAATGTGCACAACGTTTGTCAGGAGCTaGTCATCTCTCTGCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILPSYSRKHKKLSTQMCTTFVRS*SSLCFL Trigger: AAGGAAGCAGAGAGATGAGCAGCTCCTGACAAACGT...TGTGCACATTTGTGTGGACAGTTTCTTGTGTTTTCTGGAATAAGAAGGGAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR GCA 90 bp | CTATACAATTCTCCCTTCTTATTCCAGAAAACACAAGAAACTGTCCACACAAATCTCCAGAACTCTGCCTaGTGTGTCCACAGCTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LYNSPFLFQKTQETVHTNLQNSA*CVHSYQ Trigger: CTGATAGCTGTGGACACAGCAGGCAGAGTTCTGGAG...ATTTGTGTGGACAGTTTCTTGTGTTTTCTGGAATAAGAAGGGAGAATTGTATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR GCA 90 bp | CTATACAATTCTCCCTTCTTATTCCAGAAAACACAAGAAACTGTCCACACAAATCAAGCTCCAGAACTCTaGCTGCTGTGTCCACAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LYNSPFLFQKTQETVHTNQAPEL*LLCPQL Trigger: TAGCTGTGGACACAGCAGGCAGAGTTCTGGAGCTTG...ATTTGTGTGGACAGTTTCTTGTGTTTTCTGGAATAAGAAGGGAGAATTGTATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CCA 90 bp | ATTCTCCCTTCTTATTCCAGAAAACACAAGAAACTGTCCACACAAATGTGCACACAGAAACACACTTGGTaGGAACATCAGACAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ILPSYSRKHKKLSTQMCTQKHTW*EHQTGP Trigger: AGGACCTGTCTGATGTTCCCACCAAGTGTGTTTCTG...TGTGCACATTTGTGTGGACAGTTTCTTGTGTTTTCTGGAATAAGAAGGGAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| 3UTR CAA 72 bp | GTGCATCTGGTTTTCAGTATCAAAAGGCTACAAACTTaGCTTCAGGGCTATAATCCACAAGAGAAGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VHLVFSIKRLQT*LQGYNPQEKVL Trigger: CAGAACCTTCTCTTGTGGATTATAGCCCTGAAGCAAAGTTTGTAGCCTTTTGATACTGAAAACCAGATGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR TCA 90 bp | CTATACAATTCTCCCTTCTTATTCCAGAAAACACAAGAAACTGTCCACACAAATACTGCATCGATCTGGTaGACATGCTTCCTCAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LYNSPFLFQKTQETVHTNTASIW*TCFLRE Trigger: TTCCCTGAGGAAGCATGTTCACCAGATCGATGCAGT...ATTTGTGTGGACAGTTTCTTGTGTTTTCTGGAATAAGAAGGGAGAATTGTATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR TCA 90 bp | CTAAAAATTAGTCTGGGAAACTACAACAGGACAGCATGGTTCATTGTTCAAGTCTTCAGGTTCACAATCTaGGAGAACTTCAGCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LKISLGNYNRTAWFIVQVFRFTI*ENFSCC Trigger: ACAGCAGCTGAAGTTCTCTCAGATTGTGAACCTGAA...GACTTGAACAATGAACCATGCTGTCCTGTTGTAGTTTCCCAGACTAATTTTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR GCA 90 bp | CTTCCCCTGGAATGGAAATATAATTATAGGCCTCCTCTATCTAGTAACAGGAGTTTCTGTTCTGCGAACTaGTACTTGATTGTTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LPLEWKYNYRPPLSSNRSFCSAN*YLIVAD Trigger: GTCTGCAACAATCAAGTAGCAGTTCGCAGAACAGAA...ACTCCTGTTACTAGATAGAGGAGGCCTATAATTATATTTCCATTCCAGGGGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR GCA 90 bp | TGTTTCATGGCTGATAAAAGGACAATACGCTCTTTACACTCATCTCTGCAACACGTCCAGTTTCTGTTCTaGGAACTGCTACTTGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: CFMADKRTIRSLHSSLQHVQFLF*ELLLDC Trigger: ACAATCAAGTAGCAGTTCGCAGAACAGAAACTGGAC...GTGTTGCAGAGATGAGTGTAAAGAGCGTATTGTCCTTTTATCAGCCATGAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CCA 90 bp | TGTTTCATGGCTGATAAAAGGACAATACGCTCTTTACACTCATCTCTGCAACACGAATTGTTGCATAGATaGCACAGTTTAGACCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CFMADKRTIRSLHSSLQHELLHR*HSLDPA Trigger: AGCTGGGTCTAAACTGTGCCATCTATGCAACAATTC...GTGTTGCAGAGATGAGTGTAAAGAGCGTATTGTCCTTTTATCAGCCATGAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CCA 90 bp | GGATTTCTTCCCCTGGAATGGAAATATAATTATAGGCCTCCTCTATCTAGTAACTTGCAGAAACACACTTaGTGGGAACATCAGACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GFLPLEWKYNYRPPLSSNLQKHT*WEHQTG Trigger: ACCTGTCTGATGTTCCCACCAAGTGTGTTTCTGCAA...GTTACTAGATAGAGGAGGCCTATAATTATATTTCCATTCCAGGGGAAGAAATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CCA 90 bp | CTATACAATTCTCCCTTCTTATTCCAGAAAACACAAGAAACTGTCCACACAAATAGATATGCGTTTCACTaGTGGCATCGACGGTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LYNSPFLFQKTQETVHTNRYAFH*WHRRSR Trigger: ACGAGACCGTCGATGCCACCAGTGAAACGCATATCT...ATTTGTGTGGACAGTTTCTTGTGTTTTCTGGAATAAGAAGGGAGAATTGTATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CCA 90 bp | CTAAAAATTAGTCTGGGAAACTACAACAGGACAGCATGGTTCATTGTTCAAGTCCTCCCGTGTCCACTTTaGAAACTCTCATGTCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LKISLGNYNRTAWFIVQVLPCPL*KLSCLR Trigger: TCTTAGACATGAGAGTTTCCAAAGTGGACACGGGAG...GACTTGAACAATGAACCATGCTGTCCTGTTGTAGTTTCCCAGACTAATTTTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR TCA 90 bp | ATAACTACAAAATGGATACTGAAGTATACGCCTACAATCCCAGTACACCAGAGGTGCCGTGGCTTCATCTaGTTGATGATCTTTTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: ITTKWILKYTPTIPVHQRCRGFI*LMIFLM Trigger: CATTAAAAAGATCATCAATCAGATGAAGCCACGGCA...CCTCTGGTGTACTGGGATTGTAGGCGTATACTTCAGTATCCATTTTGTAGTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR GCA 90 bp | CTTCCCCTGGAATGGAAATATAATTATAGGCCTCCTCTATCTAGTAACAGGAGTACAAACCATGTCCTTTaGCTTTCAGGTTCACAATCT | + |
|
Preference number: 4 (lower is better) Translates to: LPLEWKYNYRPPLSSNRSTNHVL*LSGSQS Trigger: AGATTGTGAACCTGAAAGGCAAAGGACATGGTTTGT...ACTCCTGTTACTAGATAGAGGAGGCCTATAATTATATTTCCATTCCAGGGGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR GCA 90 bp | CAAAAGGCTACGTGTTACATGATTCTTTATAAAATGTCTGGAAGAGACAGGAAGCTCAATAGACTCTGTTaGAGAAACACACTTGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QKATCYMILYKMSGRDRKLNRLC*RNTLGG Trigger: CCCACCAAGTGTGTTTCTGCAACAGAGTCTATTGAG...CTTCCTGTCTCTTCCAGACATTTTATAAAGAATCATGTAACACGTAGCCTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR GCA 90 bp | CTAAAAATTAGTCTGGGAAACTACAACAGGACAGCATGGTTCATTGTTCAAGTCTCCCGCAAAAGAACTTaGTTGAAGTCAGACAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LKISLGNYNRTAWFIVQVSRKRT*LKSDSL Trigger: AAGACTGTCTGACTTCAAGCAAGTTCTTTTGCGGGA...GACTTGAACAATGAACCATGCTGTCCTGTTGTAGTTTCCCAGACTAATTTTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CCA 90 bp | GGATTTCTTCCCCTGGAATGGAAATATAATTATAGGCCTCCTCTATCTAGTAACAATGATGAGCTGCCGTaGCTTCATCTGATTGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: GFLPLEWKYNYRPPLSSNNDELP*LHLIDD Trigger: ATCATCAATCAGATGAAGCCACGGCAGCTCATCATT...GTTACTAGATAGAGGAGGCCTATAATTATATTTCCATTCCAGGGGAAGAAATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR GCA 90 bp | GTGTTTATTCTTGCATCTGAGACTCTCTCTGCTCTCATGACTTATCTCACTGTTTATTTTGTCAAAGGCTaGATCCACATCATCCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: VFILASETLSALMTYLTVYFVKG*IHIIQC Trigger: ACATTGGATGATGTGGATGCAGCCTTTGACAAAATA...AACAGTGAGATAAGTCATGAGAGCAGAGAGAGTCTCAGATGCAAGAATAAACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR GCA 90 bp | CTATACAATTCTCCCTTCTTATTCCAGAAAACACAAGAAACTGTCCACACAAATCTCATCCATTCTACCTaGGACTTAGAAAACTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LYNSPFLFQKTQETVHTNLIHST*DLENST Trigger: GGTGGAGTTTTCTAAGTCGCAGGTAGAATGGATGAG...ATTTGTGTGGACAGTTTCTTGTGTTTTCTGGAATAAGAAGGGAGAATTGTATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR TCA 90 bp | CTATACAATTCTCCCTTCTTATTCCAGAAAACACAAGAAACTGTCCACACAAATGCAAAAGAACTTGCTTaGAGTCAGACAGTCTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LYNSPFLFQKTQETVHTNAKELA*SQTVLV Trigger: AACCAAGACTGTCTGACTTCAAGCAAGTTCTTTTGC...ATTTGTGTGGACAGTTTCTTGTGTTTTCTGGAATAAGAAGGGAGAATTGTATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| 3UTR CAA 72 bp | CAATACGCTCTTTACACTCATCTCTGCAACACTATTTaGTGCATCTGGTTTTCAGTATCAAAAGGCTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: QYALYTHLCNTI*CIWFSVSKGYK Trigger: TTTGTAGCCTTTTGATACTGAAAACCAGATGCACAAAATAGTGTTGCAGAGATGAGTGTAAAGAGCGTATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| 3UTR CAA 72 bp | AGGAATTTTTGGATGATGTCATCTAGACACAGGCAGTaGGATTGCTCTCCAATGACATTATTGTACAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: RNFWMMSSRHRQ*DCSPMTLLYNN Trigger: ATTGTTGTACAATAATGTCATTGGAGAGCAATCCAACTGCCTGTGTCTAGATGACATCATCCAAAAATTCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS CCA 90 bp | CCCACCAAACGCACGGCAGCACTCGGCCAGATCCTGGCTGGCCTCTaGTGGGCCGTGGACAATGATGAGCTGCCGTGGCTTCATCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: PTKRTAALGQILAGL*WAVDNDELPWLHLI Trigger: AATCAGATGAAGCCACGGCAGCTCATCATTGTCCACGGCCCACCAGAGGCCAGCCAGGATCTGGCCGAGTGCTGCCGTGCGTTTGGTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS CCA 90 bp | ACCAAACGCACGGCAGCACTCGGCCAGATCCTGGCTGGCCTCTGGTaGGCCGTGGACAATGATGAGCTGCCGTGGCTTCATCTGATTGAT | + |
|
Preference number: 5 (lower is better) Translates to: TKRTAALGQILAGLW*AVDNDELPWLHLID Trigger: ATCAATCAGATGAAGCCACGGCAGCTCATCATTGTCCACGGCCCACCAGAGGCCAGCCAGGATCTGGCCGAGTGCTGCCGTGCGTTTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS CCA 90 bp | TTAATATCTTTCCCACCAAACGCACGGCAGCACTCGGCCAGATCCTaGCTGGCCTCTGGTGGGCCGTGGACAATGATGAGCTGCCGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LISFPPNARQHSARS*LASGGPWTMMSCRG Trigger: GCCACGGCAGCTCATCATTGTCCACGGCCCACCAGAGGCCAGCCAGGATCTGGCCGAGTGCTGCCGTGCGTTTGGTGGGAAAGATATTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS TCA 90 bp | TTGCGGCTGCCTTCCCCCTTCATCATCAGGTCGTGCTTTGTCTTGTaGGCCGATGGCTGGTCCACGTCTTCCTCCACGTCACTCTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LRLPSPFIIRSCFVL*ADGWSTSSSTSLSS Trigger: TGACGAGAGTGACGTGGAGGAAGACGTGGACCAGCCATCGGCTCACAAGACAAAGCACGACCTGATGATGAAGGGGGAAGGCAGCCGCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS GCA 90 bp | TCTCCAAATCTGATCCAGGAGTTGAGCAAGCTCCAGAACTCTGCCTaGTGTGTCCACAGCTATCAGCACGTTCCCGTCGCCCCGAAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: SPNLIQELSKLQNSA*CVHSYQHVPVAPKR Trigger: ACGCTTCGGGGCGACGGGAACGTGCTGATAGCTGTGGACACAGCAGGCAGAGTTCTGGAGCTTGCTCAACTCCTGGATCAGATTTGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS TCA 90 bp | GATGTCCAGGAACCTCGTGAGGTGGCAAAGGCTCCAGCGTGGGGATaGTCTCAGTCTCCTCACCCAACTCTTTCTCGTCCTCTCCAAACA | + |
|
Preference number: 5 (lower is better) Translates to: DVQEPREVAKAPAWG*SQSPHPTLSRPLQT Trigger: TGTTTGGAGAGGACGAGAAAGAGTTGGGTGAGGAGACTGAGATCATCCCCACGCTGGAGCCTTTGCCACCTCACGAGGTTCCTGGACATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS CCA 90 bp | TCCACACTCCAGGTCAGGCTGGCTGGCAAGTACAACTTTGGGGCTTaGAACTCGAGCCAAGTCAGAAAGACCGTGGCACAGAGAGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: STLQVRLAGKYNFGA*NSSQVRKTVAQREM Trigger: CATCTCTCTCTGTGCCACGGTCTTTCTGACTTGGCTCGAGTTCCAAGCCCCAAAGTTGTACTTGCCAGCCAGCCTGACCTGGAGTGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS CCA 90 bp | TTGAGAATCCACACTCCAGGTCAGGCTGGCTGGCAAGTACAACTTTaGGGCTTGGAACTCGAGCCAAGTCAGAAAGACCGTGGCACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LRIHTPGQAGWQVQL*GLELEPSQKDRGTE Trigger: CTCTGTGCCACGGTCTTTCTGACTTGGCTCGAGTTCCAAGCCCCAAAGTTGTACTTGCCAGCCAGCCTGACCTGGAGTGTGGATTCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CAA 90 bp | GCTCTAACCATGCAGCTCAGGCTGGCCTCTAATTCACAGTCCTCCTACACCAGCGGATGGAGCATCCACTaGCATTTCAGAGTCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ALTMQLRLASNSQSSYTSGWSIH*HFRVFS Trigger: GGAGAAGACTCTGAAATGCAAGTGGATGCTCCATCC...GCTGGTGTAGGAGGACTGTGAATTAGAGGCCAGCCTGAGCTGCATGGTTAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS TCA 90 bp | GCCTCTGGTGGGCCGTGGACAATGATGAGCTGCCGTGGCTTCATCTaGTTGATGATCTTTTTAATGGAGTCTCCATCGGAGCGTCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASGGPWTMMSCRGFI*LMIFLMESPSERPS Trigger: TGAAGGACGCTCCGATGGAGACTCCATTAAAAAGATCATCAATCAGATGAAGCCACGGCAGCTCATCATTGTCCACGGCCCACCAGAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS GCA 90 bp | GTCCACGTCTTCCTCCACGTCACTCTCGTCACTGGAGTCGATGTCTaGCTCTTTCGACTGCTCCAGTTTCTTAGCAGCTTCTTTCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VHVFLHVTLVTGVDV*LFRLLQFLSSFFLE Trigger: CTCAAGAAAGAAGCTGCTAAGAAACTGGAGCAGTCGAAAGAGGCAGACATCGACTCCAGTGACGAGAGTGACGTGGAGGAAGACGTGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS CCA 90 bp | ATCCTGGCTGGCCTCTGGTGGGCCGTGGACAATGATGAGCTGCCGTaGCTTCATCTGATTGATGATCTTTTTAATGGAGTCTCCATCGGA | + |
|
Preference number: 5 (lower is better) Translates to: ILAGLWWAVDNDELP*LHLIDDLFNGVSIG Trigger: TCCGATGGAGACTCCATTAAAAAGATCATCAATCAGATGAAGCCACGGCAGCTCATCATTGTCCACGGCCCACCAGAGGCCAGCCAGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CAA 90 bp | CCACGAGGAGCAGAGCTCACAGGAGCAGCCGCACGTCACCCCTTCTCAAGAAAATGGGTTCCTCTCCATTaGTCAAGCCAGATTCTAATT | + |
|
Preference number: 5 (lower is better) Translates to: PRGAELTGAAARHPFSRKWVPLH*SSQILI Trigger: AATTAGAATCTGGCTTGACAAATGGAGAGGAACCCA...TTTTCTTGAGAAGGGGTGACGTGCGGCTGCTCCTGTGAGCTCTGCTCCTCGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS GCA 90 bp | ATCCGATGCGTCCAGTTTCTGTTCTGCGAACTGCTACTTGATTGTTaGAGACAAGTACGCCCCCTACAAATTCCGCTTGAATCCCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: IRCVQFLFCELLLDC*RQVRPLQIPLESPP Trigger: GGGAGGGGATTCAAGCGGAATTTGTAGGGGGCGTACTTGTCTGCAACAATCAAGTAGCAGTTCGCAGAACAGAAACTGGACGCATCGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CAA 90 bp | GCTCTAACCATGCAGCTCAGGCTGGCCTCTAATTCACAGTCCTCCTACACCAGCGACAAACCATGTCCTTaGCCTTTCAGGTTCACAATC | + |
|
Preference number: 5 (lower is better) Translates to: ALTMQLRLASNSQSSYTSDKPCP*PFRFTI Trigger: GATTGTGAACCTGAAAGGCAAAGGACATGGTTTGTC...GCTGGTGTAGGAGGACTGTGAATTAGAGGCCAGCCTGAGCTGCATGGTTAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CAA 90 bp | CGGAACAGGAAACAGTACAGCTGCTTCACAAGTCAGCAGCTCCTTAGATGGTTACTGGCAAGTACAACTTaGGGGCTTGGAACTCGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RNRKQYSCFTSQQLLRWLLASTT*GLGTRA Trigger: GGCTCGAGTTCCAAGCCCCAAAGTTGTACTTGCCAG...TAACCATCTAAGGAGCTGCTGACTTGTGAAGCAGCTGTACTGTTTCCTGTTCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS CCA 90 bp | GTAGATATGCGTTTCACTGGTGGCATCGACGGTCTCGTGCAGCTTTaGCATGTACACTTTAATATCTTTCCCACCAAACGCACGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VDMRFTGGIDGLVQL*HVHFNIFPTKRTAA Trigger: TGCTGCCGTGCGTTTGGTGGGAAAGATATTAAAGTGTACATGCCAAAGCTGCACGAGACCGTCGATGCCACCAGTGAAACGCATATCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS CCA 90 bp | GACTCTGTTGCAGAAACACACTTGGTGGGAACATCAGACAGGTCCTaGTCCATGGGTTCCTCTCCATTTGTCAAGCCAGATTCTAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: DSVAETHLVGTSDRS*SMGSSPFVKPDSNL Trigger: CAAATTAGAATCTGGCTTGACAAATGGAGAGGAACCCATGGACCAGGACCTGTCTGATGTTCCCACCAAGTGTGTTTCTGCAACAGAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS TCA 90 bp | AAGAACTTGCTTGAAGTCAGACAGTCTTGGTTCATTCATAAAAACTaGCTGATGTCCAGGAACCTCGTGAGGTGGCAAAGGCTCCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: KNLLEVRQSWFIHKN*LMSRNLVRWQRLQR Trigger: ACGCTGGAGCCTTTGCCACCTCACGAGGTTCCTGGACATCAGTCAGTTTTTATGAATGAACCAAGACTGTCTGACTTCAAGCAAGTTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS GCA 90 bp | TCCACGTCACTCTCGTCACTGGAGTCGATGTCTGCCTCTTTCGACTaGTCCAGTTTCTTAGCAGCTTCTTTCTTGAGTTTTTCTTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: STSLSSLESMSASFD*SSFLAASFLSFSFS Trigger: GGAAAAAGAAAAACTCAAGAAAGAAGCTGCTAAGAAACTGGAGCAGTCGAAAGAGGCAGACATCGACTCCAGTGACGAGAGTGACGTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS CCA 90 bp | TGGTTTGATGATCTCGCCATACTCGTCCCATTTAATTCTTTCCTCTaGGGCAGGAAACATGGGGTAGGACTTCTTGGCCTGTTTGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: WFDDLAILVPFNSFL*GRKHGVGLLGLFEE Trigger: TTCTTCAAACAGGCCAAGAAGTCCTACCCCATGTTTCCTGCCCCAGAGGAAAGAATTAAATGGGACGAGTATGGCGAGATCATCAAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CAA 90 bp | TCTCCTTTTTCTTCTTCAAGTAATGAGCTCTTGGAACAAGGGACCTGCAGAGGATCTTCTCCATCGTCCTaGAGCTCTCCTTCTTCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: SPFSSSSNELLEQGTCRGSSPSS*SSPSSK Trigger: TTTAGAAGAAGGAGAGCTCAAGGACGATGGAGAAGA...TCCTCTGCAGGTCCCTTGTTCCAAGAGCTCATTACTTGAAGAAGAAAAAGGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CAA 90 bp | CGGAACAGGAAACAGTACAGCTGCTTCACAAGTCAGCAGCTCCTTAGATGGTTATTTTATACACAGGAATaGTTGCATAGATGGCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: RNRKQYSCFTSQQLLRWLFYTQE*LHRWHS Trigger: ACTGTGCCATCTATGCAACAATTCCTGTGTATAAAA...TAACCATCTAAGGAGCTGCTGACTTGTGAAGCAGCTGTACTGTTTCCTGTTCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CAA 90 bp | CAAAAGGCTACGTGTTACATGATTCTTTATAAAATGTCTGGAAGAGACAGGAAGGACTTCTTGGCCTGTTaGAAGAAGCTCCCTTTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: QKATCYMILYKMSGRDRKDFLAC*KKLPLR Trigger: CCGCAAAGGGAGCTTCTTCAAACAGGCCAAGAAGTC...CTTCCTGTCTCTTCCAGACATTTTATAAAGAATCATGTAACACGTAGCCTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
||
| CDS-3UTR CAA 90 bp | GTGTTTATTCTTGCATCTGAGACTCTCTCTGCTCTCATGACTTATCTCACTGTTACTCCCGTGTCCACTTaGGAAACTCTCATGTCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: VFILASETLSALMTYLTVTPVST*ETLMSK Trigger: CTTAGACATGAGAGTTTCCAAAGTGGACACGGGAGT...AACAGTGAGATAAGTCATGAGAGCAGAGAGAGTCTCAGATGCAAGAATAAACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS GCA 90 bp | ATAGTCTATGTAAGTAACTCTGGCTTTTATCTCAATAGACTCTGTTaGAGAAACACACTTGGTGGGAACATCAGACAGGTCCTGGTCCAT | + |
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Preference number: 5 (lower is better) Translates to: IVYVSNSGFYLNRLC*RNTLGGNIRQVLVH Trigger: ATGGACCAGGACCTGTCTGATGTTCCCACCAAGTGTGTTTCTGCAACAGAGTCTATTGAGATAAAAGCCAGAGTTACTTACATAGACTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS-3UTR CAA 90 bp | TGTTTCATGGCTGATAAAAGGACAATACGCTCTTTACACTCATCTCTGCAACACCGCAAAAGAACTTGCTaGAAGTCAGACAGTCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: CFMADKRTIRSLHSSLQHRKRTC*KSDSLG Trigger: ACCAAGACTGTCTGACTTCAAGCAAGTTCTTTTGCG...GTGTTGCAGAGATGAGTGTAAAGAGCGTATTGTCCTTTTATCAGCCATGAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS-3UTR CAA 90 bp | CTATACAATTCTCCCTTCTTATTCCAGAAAACACAAGAAACTGTCCACACAAATCCCTACAAATTCCGCTaGAATCCCCTCCCGCAAAAG | + |
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Preference number: 5 (lower is better) Translates to: LYNSPFLFQKTQETVHTNPYKFR*NPLPQK Trigger: CTTTTGCGGGAGGGGATTCAAGCGGAATTTGTAGGG...ATTTGTGTGGACAGTTTCTTGTGTTTTCTGGAATAAGAAGGGAGAATTGTATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS-3UTR CAA 90 bp | GTGTTTATTCTTGCATCTGAGACTCTCTCTGCTCTCATGACTTATCTCACTGTTTCTGCGAACTGCTACTaGATTGTTGCAGACAAGTAC | + |
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Preference number: 5 (lower is better) Translates to: VFILASETLSALMTYLTVSANCY*IVADKY Trigger: GTACTTGTCTGCAACAATCAAGTAGCAGTTCGCAGA...AACAGTGAGATAAGTCATGAGAGCAGAGAGAGTCTCAGATGCAAGAATAAACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS-3UTR CAA 90 bp | CTAAAAATTAGTCTGGGAAACTACAACAGGACAGCATGGTTCATTGTTCAAGTCTTCAGCTGCTGTATTTaGTCAAAGGCTGCATCCACA | + |
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Preference number: 5 (lower is better) Translates to: LKISLGNYNRTAWFIVQVFSCCI*SKAAST Trigger: TGTGGATGCAGCCTTTGACAAAATACAGCAGCTGAA...GACTTGAACAATGAACCATGCTGTCCTGTTGTAGTTTCCCAGACTAATTTTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS-3UTR CAA 90 bp | CTATACAATTCTCCCTTCTTATTCCAGAAAACACAAGAAACTGTCCACACAAATGTTGCAGAAACACACTaGGTGGGAACATCAGACAGG | + |
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Preference number: 5 (lower is better) Translates to: LYNSPFLFQKTQETVHTNVAETH*VGTSDR Trigger: CCTGTCTGATGTTCCCACCAAGTGTGTTTCTGCAAC...ATTTGTGTGGACAGTTTCTTGTGTTTTCTGGAATAAGAAGGGAGAATTGTATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS GCA 90 bp | GTTCACAATCTGAGAGAACTTCAGCTGCTGTATTTTGTCAAAGGCTaGATCCACATCATCCAATGTAAAGAGGGTAAAATCTTCTGTATT | + |
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Preference number: 5 (lower is better) Translates to: VHNLRELQLLYFVKG*IHIIQCKEGKIFCI Trigger: AATACAGAAGATTTTACCCTCTTTACATTGGATGATGTGGATGCAGCCTTTGACAAAATACAGCAGCTGAAGTTCTCTCAGATTGTGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS CCA 90 bp | CAAGTCAGAAAGACCGTGGCACAGAGAGAGATGGCGAAACTGAAATaGGTTATTTCTTTTGTCTTCAAAACATCTCATCAATTTATCACT | + |
|
Preference number: 5 (lower is better) Translates to: QVRKTVAQREMAKLK*VISFVFKTSHQFIT Trigger: AGTGATAAATTGATGAGATGTTTTGAAGACAAAAGAAATAACCCATTTCAGTTTCGCCATCTCTCTCTGTGCCACGGTCTTTCTGACTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS CCA 72 bp | CGCACGGCAGCACTCGGCCAGATCCTGGCTGGCCTCTaGTGGGCCGTGGACAATGATGAGCTGCCGTGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: RTAALGQILAGL*WAVDNDELPWL Trigger: AAGCCACGGCAGCTCATCATTGTCCACGGCCCACCAGAGGCCAGCCAGGATCTGGCCGAGTGCTGCCGTGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS CCA 72 bp | TTCCCACCAAACGCACGGCAGCACTCGGCCAGATCCTaGCTGGCCTCTGGTGGGCCGTGGACAATGATGAGC | + |
|
Preference number: 6 (lower is better) Translates to: FPPNARQHSARS*LASGGPWTMMS Trigger: GCTCATCATTGTCCACGGCCCACCAGAGGCCAGCCAGGATCTGGCCGAGTGCTGCCGTGCGTTTGGTGGGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS CAA 72 bp | TGCGGCTGCCTTCCCCCTTCATCATCAGGTCGTGCTTaGTCTTGTGAGCCGATGGCTGGTCCACGTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: CGCLPPSSSGRA*SCEPMAGPRLP Trigger: AGGAAGACGTGGACCAGCCATCGGCTCACAAGACAAAGCACGACCTGATGATGAAGGGGGAAGGCAGCCGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS TCA 72 bp | CCTTCCCCCTTCATCATCAGGTCGTGCTTTGTCTTGTaGGCCGATGGCTGGTCCACGTCTTCCTCCACGTCA | + |
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Preference number: 6 (lower is better) Translates to: PSPFIIRSCFVL*ADGWSTSSSTS Trigger: TGACGTGGAGGAAGACGTGGACCAGCCATCGGCTCACAAGACAAAGCACGACCTGATGATGAAGGGGGAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS TCA 72 bp | GAACCTCGTGAGGTGGCAAAGGCTCCAGCGTGGGGATaGTCTCAGTCTCCTCACCCAACTCTTTCTCGTCCT | + |
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Preference number: 6 (lower is better) Translates to: EPREVAKAPAWG*SQSPHPTLSRP Trigger: AGGACGAGAAAGAGTTGGGTGAGGAGACTGAGATCATCCCCACGCTGGAGCCTTTGCCACCTCACGAGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS CCA 72 bp | CAGGTCAGGCTGGCTGGCAAGTACAACTTTGGGGCTTaGAACTCGAGCCAAGTCAGAAAGACCGTGGCACAG | + |
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Preference number: 6 (lower is better) Translates to: QVRLAGKYNFGA*NSSQVRKTVAQ Trigger: CTGTGCCACGGTCTTTCTGACTTGGCTCGAGTTCCAAGCCCCAAAGTTGTACTTGCCAGCCAGCCTGACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS CAA 72 bp | CCAGGTCAGGCTGGCTGGCAAGTACAACTTTGGGGCTaGGAACTCGAGCCAAGTCAGAAAGACCGTGGCACA | + |
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Preference number: 6 (lower is better) Translates to: PGQAGWQVQLWG*ELEPSQKDRGT Trigger: TGTGCCACGGTCTTTCTGACTTGGCTCGAGTTCCAAGCCCCAAAGTTGTACTTGCCAGCCAGCCTGACCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS CAA 72 bp | CCACACTCCAGGTCAGGCTGGCTGGCAAGTACAACTTaGGGGCTTGGAACTCGAGCCAAGTCAGAAAGACCG | + |
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Preference number: 6 (lower is better) Translates to: PHSRSGWLASTT*GLGTRAKSERP Trigger: CGGTCTTTCTGACTTGGCTCGAGTTCCAAGCCCCAAAGTTGTACTTGCCAGCCAGCCTGACCTGGAGTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS CCA 72 bp | CACACTCCAGGTCAGGCTGGCTGGCAAGTACAACTTTaGGGCTTGGAACTCGAGCCAAGTCAGAAAGACCGT | + |
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Preference number: 6 (lower is better) Translates to: HTPGQAGWQVQL*GLELEPSQKDR Trigger: ACGGTCTTTCTGACTTGGCTCGAGTTCCAAGCCCCAAAGTTGTACTTGCCAGCCAGCCTGACCTGGAGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS CAA 90 bp | ATCCACACTCCAGGTCAGGCTGGCTGGCAAGTACAACTTTGGGGCTaGGAACTCGAGCCAAGTCAGAAAGACCGTGGCACAGAGAGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: IHTPGQAGWQVQLWG*ELEPSQKDRGTERD Trigger: ATCTCTCTCTGTGCCACGGTCTTTCTGACTTGGCTCGAGTTCCAAGCCCCAAAGTTGTACTTGCCAGCCAGCCTGACCTGGAGTGTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS CAA 90 bp | CTTGAGAATCCACACTCCAGGTCAGGCTGGCTGGCAAGTACAACTTaGGGGCTTGGAACTCGAGCCAAGTCAGAAAGACCGTGGCACAGA | + |
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Preference number: 6 (lower is better) Translates to: LENPHSRSGWLASTT*GLGTRAKSERPWHR Trigger: TCTGTGCCACGGTCTTTCTGACTTGGCTCGAGTTCCAAGCCCCAAAGTTGTACTTGCCAGCCAGCCTGACCTGGAGTGTGGATTCTCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS CCA 72 bp | AAGAGGTCCCTTGAGAATCCACACTCCAGGTCAGGCTaGCTGGCAAGTACAACTTTGGGGCTTGGAACTCGA | + |
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Preference number: 6 (lower is better) Translates to: KRSLENPHSRSG*LASTTLGLGTR Trigger: TCGAGTTCCAAGCCCCAAAGTTGTACTTGCCAGCCAGCCTGACCTGGAGTGTGGATTCTCAAGGGACCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS CAA 90 bp | GGCCTTCTGCTGGGCCATGGCACTAGAATCGGATGGAGCATCCACTaGCATTTCAGAGTCTTCTCCATCGTCCTTGAGCTCTCCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: GLLLGHGTRIGWSIH*HFRVFSIVLELSFF Trigger: GAAGAAGGAGAGCTCAAGGACGATGGAGAAGACTCTGAAATGCAAGTGGATGCTCCATCCGATTCTAGTGCCATGGCCCAGCAGAAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS TCA 72 bp | TTTAGGGTCCTGACACCACTGAATAAAGAGGTCCCTTaGGAATCCACACTCCAGGTCAGGCTGGCTGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: FRVLTPLNKEVP*ESTLQVRLAGK Trigger: CTTGCCAGCCAGCCTGACCTGGAGTGTGGATTCTCAAGGGACCTCTTTATTCAGTGGTGTCAGGACCCTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS CCA 72 bp | CATGGCCTTCTGCTGGGCCATGGCACTAGAATCGGATaGAGCATCCACTTGCATTTCAGAGTCTTCTCCATC | + |
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Preference number: 6 (lower is better) Translates to: HGLLLGHGTRIG*SIHLHFRVFSI Trigger: GATGGAGAAGACTCTGAAATGCAAGTGGATGCTCCATCCGATTCTAGTGCCATGGCCCAGCAGAAGGCCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS CAA 72 bp | CTGGGCCATGGCACTAGAATCGGATGGAGCATCCACTaGCATTTCAGAGTCTTCTCCATCGTCCTTGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: LGHGTRIGWSIH*HFRVFSIVLEL Trigger: GAGCTCAAGGACGATGGAGAAGACTCTGAAATGCAAGTGGATGCTCCATCCGATTCTAGTGCCATGGCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS CCA 72 bp | GATCTCGCCATACTCGTCCCATTTAATTCTTTCCTCTaGGGCAGGAAACATGGGGTAGGACTTCTTGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: DLAILVPFNSFL*GRKHGVGLLGL Trigger: CAGGCCAAGAAGTCCTACCCCATGTTTCCTGCCCCAGAGGAAAGAATTAAATGGGACGAGTATGGCGAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS CCA 72 bp | GCAGAAACACACTTGGTGGGAACATCAGACAGGTCCTaGTCCATGGGTTCCTCTCCATTTGTCAAGCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: AETHLVGTSDRS*SMGSSPFVKPD Trigger: ATCTGGCTTGACAAATGGAGAGGAACCCATGGACCAGGACCTGTCTGATGTTCCCACCAAGTGTGTTTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS CCA 72 bp | CGTTTCACTGGTGGCATCGACGGTCTCGTGCAGCTTTaGCATGTACACTTTAATATCTTTCCCACCAAACGC | + |
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Preference number: 6 (lower is better) Translates to: RFTGGIDGLVQL*HVHFNIFPTKR Trigger: GCGTTTGGTGGGAAAGATATTAAAGTGTACATGCCAAAGCTGCACGAGACCGTCGATGCCACCAGTGAAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS CCA 72 bp | TCTGGCCCATTTTATACACAGGAATTGTTGCATAGATaGCACAGTTTAGACCCAGCTTCCCCACGGCGAATG | + |
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Preference number: 6 (lower is better) Translates to: SGPFYTQELLHR*HSLDPASPRRM Trigger: CATTCGCCGTGGGGAAGCTGGGTCTAAACTGTGCCATCTATGCAACAATTCCTGTGTATAAAATGGGCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS CCA 72 bp | CACACTTGGTGGGAACATCAGACAGGTCCTGGTCCATaGGTTCCTCTCCATTTGTCAAGCCAGATTCTAATT | + |
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Preference number: 6 (lower is better) Translates to: HTWWEHQTGPGP*VPLHLSSQILI Trigger: AATTAGAATCTGGCTTGACAAATGGAGAGGAACCCATGGACCAGGACCTGTCTGATGTTCCCACCAAGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS CAA 90 bp | GTAACTCTGGCTTTTATCTCAATAGACTCTGTTGCAGAAACACACTaGGTGGGAACATCAGACAGGTCCTGGTCCATGGGTTCCTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VTLAFISIDSVAETH*VGTSDRSWSMGSSP Trigger: TGGAGAGGAACCCATGGACCAGGACCTGTCTGATGTTCCCACCAAGTGTGTTTCTGCAACAGAGTCTATTGAGATAAAAGCCAGAGTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS GCA 72 bp | CTCTCGTCACTGGAGTCGATGTCTGCCTCTTTCGACTaGTCCAGTTTCTTAGCAGCTTCTTTCTTGAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: LSSLESMSASFD*SSFLAASFLSF Trigger: AAAACTCAAGAAAGAAGCTGCTAAGAAACTGGAGCAGTCGAAAGAGGCAGACATCGACTCCAGTGACGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS GCA 72 bp | GTCCAGTTTCTGTTCTGCGAACTGCTACTTGATTGTTaGAGACAAGTACGCCCCCTACAAATTCCGCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: VQFLFCELLLDC*RQVRPLQIPLE Trigger: TTCAAGCGGAATTTGTAGGGGGCGTACTTGTCTGCAACAATCAAGTAGCAGTTCGCAGAACAGAAACTGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS CCA 72 bp | CTTTTAATCTTACCTGGTAGATATGCGTTTCACTGGTaGCATCGACGGTCTCGTGCAGCTTTGGCATGTACA | + |
|
Preference number: 6 (lower is better) Translates to: LLILPGRYAFHW*HRRSRAALACT Trigger: TGTACATGCCAAAGCTGCACGAGACCGTCGATGCCACCAGTGAAACGCATATCTACCAGGTAAGATTAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS CCA 72 bp | AGTCTTTTAATCTTACCTGGTAGATATGCGTTTCACTaGTGGCATCGACGGTCTCGTGCAGCTTTGGCATGT | + |
|
Preference number: 6 (lower is better) Translates to: SLLILPGRYAFH*WHRRSRAALAC Trigger: ACATGCCAAAGCTGCACGAGACCGTCGATGCCACCAGTGAAACGCATATCTACCAGGTAAGATTAAAAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS TCA 72 bp | GGGAACATCCATTTAAGTGGATCTCCCTCTTGTGGTTaGAGTCCACGGCATACACAATTTCTTCTTCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GNIHLSGSPSCG*SPRHTQFLLLH Trigger: ATGGAGAAGAAGAAATTGTGTATGCCGTGGACTTCAACCACAAGAGGGAGATCCACTTAAATGGATGTTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS CCA 72 bp | TCCAGGGAACATCCATTTAAGTGGATCTCCCTCTTGTaGTTGAAGTCCACGGCATACACAATTTCTTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SREHPFKWISLL*LKSTAYTISSS Trigger: AGAAGAAGAAATTGTGTATGCCGTGGACTTCAACCACAAGAGGGAGATCCACTTAAATGGATGTTCCCTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS CAA 72 bp | AGGGAACATCCATTTAAGTGGATCTCCCTCTTGTGGTaGAAGTCCACGGCATACACAATTTCTTCTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: REHPFKWISLLW*KSTAYTISSSP Trigger: TGGAGAAGAAGAAATTGTGTATGCCGTGGACTTCAACCACAAGAGGGAGATCCACTTAAATGGATGTTCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS TCA 72 bp | ATCCAAGCTAACTCGGCATCTTTAGCTTTACAGAACTaGAGGGAGCTGACAAGTGAGTCTTTTAATCTTACC | + |
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Preference number: 6 (lower is better) Translates to: IQANSASLALQN*RELTSESFNLT Trigger: GGTAAGATTAAAAGACTCACTTGTCAGCTCCCTTCAGTTCTGTAAAGCTAAAGATGCCGAGTTAGCTTGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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| CDS CAA 72 bp | TACAAATTCCGCTTGAATCCCCTCCCGCAAAAGAACTaGCTTGAAGTCAGACAGTCTTGGTTCATTCATAAA | + |
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Preference number: 6 (lower is better) Translates to: YKFRLNPLPQKN*LEVRQSWFIHK Trigger: TTTATGAATGAACCAAGACTGTCTGACTTCAAGCAAGTTCTTTTGCGGGAGGGGATTCAAGCGGAATTTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047357.10 |
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