Pregenerated sensors for CPPED1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000065979Ensembl transcript IDs: ENSMUST00000073371.7, ENSMUST00000096272.11, ENSMUST00000121750.2, ENSMUST00000127972.8
Found 192 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGGAGAGGTCTGTGTCAAGACCAGCTTTCCCGCCACGTCATAGCTaGCAACGGGGTGGGCCGCCTGCATCGGGAGAATACACACAGGGA | + |
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Preference number: 1 (lower is better) Translates to: WERSVSRPAFPPRHS*QRGGPPASGEYTQG Trigger: TCCCTGTGTGTATTCTCCCGATGCAGGCGGCCCACCCCGTTGTCAGCTATGACGTGGCGGGAAAGCTGGTCTTGACACAGACCTCTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
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| 3UTR GCA 90 bp | CAAAGTAACACACAGAGTGATGATGGCCCAGATGGTCAGCTCTGTTaGAGGGGAGGGAGCTTCTGTCCCCATGCTACACATCTGGATCCA | + |
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Preference number: 1 (lower is better) Translates to: QSNTQSDDGPDGQLC*RGGSFCPHATHLDP Trigger: TGGATCCAGATGTGTAGCATGGGGACAGAAGCTCCCTCCCCTGCAACAGAGCTGACCATCTGGGCCATCATCACTCTGTGTGTTACTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
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| 3UTR CCA 90 bp | ACCTACTCCATCACAAGTAGGTGGAGAACTGGCGGCCCAGGCTCCTaGTTTCTGACTGAGGTGGCTGTCTTCTGTTTCCTCTTCCTATCA | + |
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Preference number: 1 (lower is better) Translates to: TYSITSRWRTGGPGS*FLTEVAVFCFLFLS Trigger: TGATAGGAAGAGGAAACAGAAGACAGCCACCTCAGTCAGAAACCAGGAGCCTGGGCCGCCAGTTCTCCACCTACTTGTGATGGAGTAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
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| 3UTR TCA 90 bp | GCTTCCATTCTGGTCTTCTGGAACAGAGTCTGCACATGTCTGAGGTaGCGTTTGTCATCAGAAAGGCAAACAGCCTGGCGTGGACTCCCT | + |
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Preference number: 1 (lower is better) Translates to: ASILVFWNRVCTCLR*RLSSERQTAWRGLP Trigger: AGGGAGTCCACGCCAGGCTGTTTGCCTTTCTGATGACAAACGTCACCTCAGACATGTGCAGACTCTGTTCCAGAAGACCAGAATGGAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
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| 3UTR CCA 90 bp | GTCCCCATGCTACACATCTGGATCCAGGGACCCCAAAGCTGTAACTaGGTCTTAGTCTCTCCATTGCTCGTCTCTGCTTTCTTACTACCG | + |
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Preference number: 1 (lower is better) Translates to: VPMLHIWIQGPQSCN*VLVSPLLVSAFLLP Trigger: CGGTAGTAAGAAAGCAGAGACGAGCAATGGAGAGACTAAGACCCAGTTACAGCTTTGGGGTCCCTGGATCCAGATGTGTAGCATGGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
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| 3UTR TCA 90 bp | CCATCACAAGTAGGTGGAGAACTGGCGGCCCAGGCTCCTGGTTTCTaGCTGAGGTGGCTGTCTTCTGTTTCCTCTTCCTATCACATTTTT | + |
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Preference number: 1 (lower is better) Translates to: PSQVGGELAAQAPGF*LRWLSSVSSSYHIF Trigger: AAAAATGTGATAGGAAGAGGAAACAGAAGACAGCCACCTCAGTCAGAAACCAGGAGCCTGGGCCGCCAGTTCTCCACCTACTTGTGATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
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| 3UTR TCA 90 bp | TGGAGGCCCAGAATGTGTGGCAGTTTTACACTCTTGCTGTTTCAGTaGGAGTCAGAGATAAGGGGACTGTCTCTGCTCACCTACTCCATC | + |
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Preference number: 1 (lower is better) Translates to: WRPRMCGSFTLLLFQ*ESEIRGLSLLTYSI Trigger: GATGGAGTAGGTGAGCAGAGACAGTCCCCTTATCTCTGACTCTCACTGAAACAGCAAGAGTGTAAAACTGCCACACATTCTGGGCCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
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| 3UTR CCA 90 bp | TGGGTCTTAGTCTCTCCATTGCTCGTCTCTGCTTTCTTACTACCGTaGAGGCCCAGAATGTGTGGCAGTTTTACACTCTTGCTGTTTCAG | + |
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Preference number: 1 (lower is better) Translates to: WVLVSPLLVSAFLLP*RPRMCGSFTLLLFQ Trigger: CTGAAACAGCAAGAGTGTAAAACTGCCACACATTCTGGGCCTCCACGGTAGTAAGAAAGCAGAGACGAGCAATGGAGAGACTAAGACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
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| 3UTR TCA 90 bp | CTGTTTACAAGCCCGCCTTTCTGCTCAGACATTTCTATAAGGGGCTaGGATTATTCTGGCAAAATGGAAGGTGATGGTGTGAAGGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: LFTSPPFCSDISIRG*DYSGKMEGDGVKAG Trigger: CCCAGCCTTCACACCATCACCTTCCATTTTGCCAGAATAATCTCAGCCCCTTATAGAAATGTCTGAGCAGAAAGGCGGGCTTGTAAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
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| 3UTR GCA 90 bp | ACCAGCAAACAGACAAGGACACTCCTGAGAGTTCTGCCTGCCTGTTaGCCTCCAAGAATGTTAAAGAAAACAGCTCTAGCTGTTTTCCTT | + |
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Preference number: 1 (lower is better) Translates to: TSKQTRTLLRVLPAC*PPRMLKKTALAVFL Trigger: AAGGAAAACAGCTAGAGCTGTTTTCTTTAACATTCTTGGAGGGCAACAGGCAGGCAGAACTCTCAGGAGTGTCCTTGTCTGTTTGCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
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| 3UTR TCA 90 bp | TATCACATTTTTATAGGCCTAGTCCAGGACAGATGTTTCTGTAGGTaGTATCCATGGGCTCTACCCGGAGGAGTCATCGATAGATGGTCA | + |
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Preference number: 1 (lower is better) Translates to: YHIFIGLVQDRCFCR*YPWALPGGVIDRWS Trigger: TGACCATCTATCGATGACTCCTCCGGGTAGAGCCCATGGATATCACCTACAGAAACATCTGTCCTGGACTAGGCCTATAAAAATGTGATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
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| 3UTR TCA 90 bp | TTATGTAAGTGGCAAATAACATGGTATAATGTAAATTATACCCAATaGCACAGTTCTGTGTTCTTCTTGGGAGAGGTCTGTGTCAAGACC | + |
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Preference number: 1 (lower is better) Translates to: LCKWQITWYNVNYTQ*HSSVFFLGEVCVKT Trigger: GGTCTTGACACAGACCTCTCCCAAGAAGAACACAGAACTGTGTCATTGGGTATAATTTACATTATACCATGTTATTTGCCACTTACATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
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| 3UTR-3UTR GCA 90 bp | GGCACCAGGATGGCTGGCACACAGAGCAAATTCCACAGAGGTCAGAGCTCCCAGCTGGCGTGGACTCCCTaGACGGTGTTCATAGCATCA | + |
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Preference number: 2 (lower is better) Translates to: GTRMAGTQSKFHRGQSSQLAWTP*TVFIAS Trigger: TGATGCTATGAACACCGTGCAGGGAGTCCACGCCAG...CTGGGAGCTCTGACCTCTGTGGAATTTGCTCTGTGTGCCAGCCATCCTGGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCAGGGGAGGGAGCTTCTGTCCCCATGCTACACATCTGGATCCAGGGACCCCCTCTTGCTGTTTCAGTaGGAGTCAGAGATAAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: LQGRELLSPCYTSGSRDPLLLFQ*ESEIRG Trigger: TCCCCTTATCTCTGACTCTCACTGAAACAGCAAGAG...GGGGTCCCTGGATCCAGATGTGTAGCATGGGGACAGAAGCTCCCTCCCCTGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
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| 3UTR-3UTR TCA 90 bp | TTGCAGGGGAGGGAGCTTCTGTCCCCATGCTACACATCTGGATCCAGGGACCCCTTAATTGGGGTTGGCTaGCAGGTTCAGAGATTCAGT | + |
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Preference number: 2 (lower is better) Translates to: LQGRELLSPCYTSGSRDPLIGVG*QVQRFS Trigger: ACTGAATCTCTGAACCTGTCAGCCAACCCCAATTAA...GGGGTCCCTGGATCCAGATGTGTAGCATGGGGACAGAAGCTCCCTCCCCTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
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| 3UTR-3UTR TCA 90 bp | ATGGCTGGCACACAGAGCAAATTCCACAGAGGTCAGAGCTCCCAGGGGAGGCAGTGCACATGTCTGAGGTaGCGTTTGTCATCAGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: MAGTQSKFHRGQSSQGRQCTCLR*RLSSER Trigger: CCTTTCTGATGACAAACGTCACCTCAGACATGTGCA...CTGCCTCCCCTGGGAGCTCTGACCTCTGTGGAATTTGCTCTGTGTGCCAGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
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| 3UTR-3UTR TCA 90 bp | AGTACATCTGACCTGAAGGCTGCTGGGAGAAGACTGGCTCACGGGCAACTAGGAAGCCCACCCCTACAGTaGCATACTTCTTCCAACAAG | + |
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Preference number: 2 (lower is better) Translates to: STSDLKAAGRRLAHGQLGSPPLQ*HTSSNK Trigger: CTTGTTGGAAGAAGTATGTCACTGTAGGGGTGGGCT...TCCTAGTTGCCCGTGAGCCAGTCTTCTCCCAGCAGCCTTCAGGTCAGATGTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
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| 3UTR-3UTR CCA 90 bp | CTTCTGGAACAGAGTCTGCACATGTCTGAGGTGACGTTTGTCATCAGAAAGGCAGACGACAAACCTATGTaGCCCTGGGACTGGGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: LLEQSLHMSEVTFVIRKADDKPM*PWDWGW Trigger: CCACCCCCAGTCCCAGGGCCACATAGGTTTGTCGTC...TGCCTTTCTGATGACAAACGTCACCTCAGACATGTGCAGACTCTGTTCCAGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGCTGGCACACAGAGCAAATTCCACAGAGGTCAGAGCTCCCAGGGGAGGCAGTTGCTGCTTCCATTCTaGTCTTCTGGAACAGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: MAGTQSKFHRGQSSQGRQLLLPF*SSGTES Trigger: AGACTCTGTTCCAGAAGACCAGAATGGAAGCAGCAA...CTGCCTCCCCTGGGAGCTCTGACCTCTGTGGAATTTGCTCTGTGTGCCAGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGCTGGCACACAGAGCAAATTCCACAGAGGTCAGAGCTCCCAGGGGAGGCAGGTTCTGTGTTCTTCTTaGGAGAGGTCTGTGTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: MAGTQSKFHRGQSSQGRQVLCSS*ERSVSR Trigger: TCTTGACACAGACCTCTCCCAAGAAGAACACAGAAC...CTGCCTCCCCTGGGAGCTCTGACCTCTGTGGAATTTGCTCTGTGTGCCAGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
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| 3UTR-3UTR TCA 90 bp | TCGTCTCTGCTTTCTTACTACCGTGGAGGCCCAGAATGTGTGGCAGTTTTACACAGTCAAGAGTACATCTaGCCTGAAGGCTGCTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: SSLLSYYRGGPECVAVLHSQEYI*PEGCWE Trigger: CTCCCAGCAGCCTTCAGGTCAGATGTACTCTTGACT...GTGTAAAACTGCCACACATTCTGGGCCTCCACGGTAGTAAGAAAGCAGAGACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
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| 3UTR-3UTR TCA 90 bp | GGCACCAGGATGGCTGGCACACAGAGCAAATTCCACAGAGGTCAGAGCTCCCAGTTAAAAGCTGCACAATaGGAAGAATTCACCCAAACA | + |
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Preference number: 2 (lower is better) Translates to: GTRMAGTQSKFHRGQSSQLKAAQ*EEFTQT Trigger: TGTTTGGGTGAATTCTTCTCATTGTGCAGCTTTTAA...CTGGGAGCTCTGACCTCTGTGGAATTTGCTCTGTGTGCCAGCCATCCTGGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
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| 3UTR-3UTR CCA 90 bp | CCCATGCTACACATCTGGATCCAGGGACCCCAAAGCTGTAACTGGGTCTTAGTCAAGGGGAAGAAGTCATaGAAGCTAACTGACTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: PMLHIWIQGPQSCNWVLVKGKKS*KLTDSD Trigger: ATCAGAGTCAGTTAGCTTCCATGACTTCTTCCCCTT...GACTAAGACCCAGTTACAGCTTTGGGGTCCCTGGATCCAGATGTGTAGCATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
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| 3UTR-3UTR CCA 90 bp | TCGTCTCTGCTTTCTTACTACCGTGGAGGCCCAGAATGTGTGGCAGTTTTACACAATAGTGCCATCTCCTaGGCCAAGCATATTCAAGCC | + |
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Preference number: 2 (lower is better) Translates to: SSLLSYYRGGPECVAVLHNSAIS*AKHIQA Trigger: GGCTTGAATATGCTTGGCCCAGGAGATGGCACTATT...GTGTAAAACTGCCACACATTCTGGGCCTCCACGGTAGTAAGAAAGCAGAGACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
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| 3UTR-3UTR CCA 90 bp | TGGCCCTGGTTACTTAGGCACCAGGATGGCTGGCACACAGAGCAAATTCCACAGATTGAGGGCAGTAGGTaGTTATTGAAGTCAGAAACA | + |
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Preference number: 2 (lower is better) Translates to: WPWLLRHQDGWHTEQIPQIEGSR*LLKSET Trigger: TGTTTCTGACTTCAATAACCACCTACTGCCCTCAAT...CTGTGGAATTTGCTCTGTGTGCCAGCCATCCTGGTGCCTAAGTAACCAGGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
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| 3UTR-3UTR TCA 90 bp | GCAAATTCCACAGAGGTCAGAGCTCCCAGGGGAGGCAGAAGAGCGAATTCCATGGTAAATTATACCCAATaGCACAGTTCTGTGTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: ANSTEVRAPRGGRRANSMVNYTQ*HSSVFF Trigger: GAAGAACACAGAACTGTGTCATTGGGTATAATTTAC...CATGGAATTCGCTCTTCTGCCTCCCCTGGGAGCTCTGACCTCTGTGGAATTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
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| 3UTR-3UTR CCA 90 bp | TCGTCTCTGCTTTCTTACTACCGTGGAGGCCCAGAATGTGTGGCAGTTTTACACCCAGACAATAGGAGCTaGACAGGGATAACTGAAATG | + |
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Preference number: 2 (lower is better) Translates to: SSLLSYYRGGPECVAVLHPDNRS*TGITEM Trigger: CATTTCAGTTATCCCTGTCCAGCTCCTATTGTCTGG...GTGTAAAACTGCCACACATTCTGGGCCTCCACGGTAGTAAGAAAGCAGAGACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
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| 3UTR-3UTR TCA 90 bp | GTCTCTGCTTTCTTACTACCGTGGAGGCCCAGAATGTGTGGCAGTTTTACACTCAGATGGTCACATGAATaGCTTTGTGTAAGACACCAG | + |
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Preference number: 2 (lower is better) Translates to: VSAFLLPWRPRMCGSFTLRWSHE*LCVRHQ Trigger: CTGGTGTCTTACACAAAGTCATTCATGTGACCATCT...GAGTGTAAAACTGCCACACATTCTGGGCCTCCACGGTAGTAAGAAAGCAGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
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| 3UTR-3UTR TCA 90 bp | AGTCAGCTCGGAAACGTATGTGTTTTGAGGACAAGCACTTACTTCGTTTCCTTTTGGCAAAATGGAAGGTaGTGGTGTGAAGGCTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: SQLGNVCVLRTSTYFVSFWQNGR*WCEGWV Trigger: CACCCAGCCTTCACACCATCACCTTCCATTTTGCCA...AAAGGAAACGAAGTAAGTGCTTGTCCTCAAAACACATACGTTTCCGAGCTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCTTATCAAGGAAAGGCAGTTCTCTTTTGAAATAAGGGTAGGACCCAGCAGTTGGCAAAATGGAAGGTaGTGGTGTGAAGGCTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: CLIKERQFSFEIRVGPSSWQNGR*WCEGWV Trigger: CACCCAGCCTTCACACCATCACCTTCCATTTTGCCA...ACTGCTGGGTCCTACCCTTATTTCAAAAGAGAACTGCCTTTCCTTGATAAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
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| 3UTR CAA 90 bp | AAGGAAAGGCAGTTCTCTTTTGAAATAAGGGTAGGACCCAGCAGTTaGACTGATGTGAAAGCACATCTGTTTACAAGCCCGCCTTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: KERQFSFEIRVGPSS*TDVKAHLFTSPPFC Trigger: GCAGAAAGGCGGGCTTGTAAACAGATGTGCTTTCACATCAGTCAAACTGCTGGGTCCTACCCTTATTTCAAAAGAGAACTGCCTTTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
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| 3UTR-3UTR TCA 90 bp | AGTCAGCTCGGAAACGTATGTGTTTTGAGGACAAGCACTTACTTCGTTTCCTTTATCACTCTTGGGTACTaGGTTGGGATTGAGGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: SQLGNVCVLRTSTYFVSFITLGY*VGIEGS Trigger: ACTGCCCTCAATCCCAACTCAGTACCCAAGAGTGAT...AAAGGAAACGAAGTAAGTGCTTGTCCTCAAAACACATACGTTTCCGAGCTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTGTTTTGAGGACAAGCACTTACTTCGTTTCCTTTGCTCTATCCCATATCCTATCACTCTTGGGTACTaGGTTGGGATTGAGGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: MCFEDKHLLRFLCSIPYPITLGY*VGIEGS Trigger: ACTGCCCTCAATCCCAACTCAGTACCCAAGAGTGAT...AGGATATGGGATAGAGCAAAGGAAACGAAGTAAGTGCTTGTCCTCAAAACACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
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| 3UTR-3UTR GCA 90 bp | ATGTGTTTTGAGGACAAGCACTTACTTCGTTTCCTTTGCTCTATCCCATATCCTGCTGCGTTTTCCTTATaGAGCTTGGACAAGGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: MCFEDKHLLRFLCSIPYPAAFSL*SLDKGH Trigger: ATGCCCCTTGTCCAAGCTGCATAAGGAAAACGCAGC...AGGATATGGGATAGAGCAAAGGAAACGAAGTAAGTGCTTGTCCTCAAAACACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCAGCTCGGAAACGTATGTGTTTTGAGGACAAGCACTTACTTCGTTTCCTTTTCCATTCTGGTCTTCTaGAACAGAGTCTGCACATGT | + |
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Preference number: 2 (lower is better) Translates to: SQLGNVCVLRTSTYFVSFSILVF*NRVCTC Trigger: ACATGTGCAGACTCTGTTCCAGAAGACCAGAATGGA...AAAGGAAACGAAGTAAGTGCTTGTCCTCAAAACACATACGTTTCCGAGCTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCAGCTCGGAAACGTATGTGTTTTGAGGACAAGCACTTACTTCGTTTCCTTTTTGCTGCTTCCATTCTaGTCTTCTGGAACAGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: SQLGNVCVLRTSTYFVSFLLLPF*SSGTES Trigger: AGACTCTGTTCCAGAAGACCAGAATGGAAGCAGCAA...AAAGGAAACGAAGTAAGTGCTTGTCCTCAAAACACATACGTTTCCGAGCTGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTGTTTTGAGGACAAGCACTTACTTCGTTTCCTTTGCTCTATCCCATATCCTTCCATTCTGGTCTTCTaGAACAGAGTCTGCACATGT | + |
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Preference number: 2 (lower is better) Translates to: MCFEDKHLLRFLCSIPYPSILVF*NRVCTC Trigger: ACATGTGCAGACTCTGTTCCAGAAGACCAGAATGGA...AGGATATGGGATAGAGCAAAGGAAACGAAGTAAGTGCTTGTCCTCAAAACACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTGTTTTGAGGACAAGCACTTACTTCGTTTCCTTTGCTCTATCCCATATCCTGTTCTGTGTTCTTCTTaGGAGAGGTCTGTGTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: MCFEDKHLLRFLCSIPYPVLCSS*ERSVSR Trigger: TCTTGACACAGACCTCTCCCAAGAAGAACACAGAAC...AGGATATGGGATAGAGCAAAGGAAACGAAGTAAGTGCTTGTCCTCAAAACACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTGTTTTGAGGACAAGCACTTACTTCGTTTCCTTTGCTCTATCCCATATCCTGTAAATTATACCCAATaGCACAGTTCTGTGTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: MCFEDKHLLRFLCSIPYPVNYTQ*HSSVFF Trigger: GAAGAACACAGAACTGTGTCATTGGGTATAATTTAC...AGGATATGGGATAGAGCAAAGGAAACGAAGTAAGTGCTTGTCCTCAAAACACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
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| 3UTR CAA 90 bp | TTTAGTGGGCTTTGCGGTTCATTTATAACCAGTGGGTTTTTAAAGTaGGTTTCAGATTCTATAGTGTCGCTGCAGGATACTGTAAAACTT | + |
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Preference number: 2 (lower is better) Translates to: FSGLCGSFITSGFLK*VSDSIVSLQDTVKL Trigger: AAGTTTTACAGTATCCTGCAGCGACACTATAGAATCTGAAACCAACTTTAAAAACCCACTGGTTATAAATGAACCGCAAAGCCCACTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
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| 3UTR-3UTR CAA 90 bp | TTGCAGGGGAGGGAGCTTCTGTCCCCATGCTACACATCTGGATCCAGGGACCCCATCCCCAGACACTGCTaGTCTTTCCTACCCTGGTCT | + |
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Preference number: 3 (lower is better) Translates to: LQGRELLSPCYTSGSRDPIPRHC*SFLPWS Trigger: AGACCAGGGTAGGAAAGACAAGCAGTGTCTGGGGAT...GGGGTCCCTGGATCCAGATGTGTAGCATGGGGACAGAAGCTCCCTCCCCTGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
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| 3UTR-3UTR CAA 90 bp | TTGCAGGGGAGGGAGCTTCTGTCCCCATGCTACACATCTGGATCCAGGGACCCCAGTTCTGCCTGCCTGTaGCCCTCCAAGAATGTTAAA | + |
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Preference number: 3 (lower is better) Translates to: LQGRELLSPCYTSGSRDPSSACL*PSKNVK Trigger: TTTAACATTCTTGGAGGGCAACAGGCAGGCAGAACT...GGGGTCCCTGGATCCAGATGTGTAGCATGGGGACAGAAGCTCCCTCCCCTGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
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| 3UTR-3UTR CAA 90 bp | ATGGCTGGCACACAGAGCAAATTCCACAGAGGTCAGAGCTCCCAGGGGAGGCAGGGTACTGAGTTGGGATaGAGGGCAGTAGGTGGTTAT | + |
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Preference number: 3 (lower is better) Translates to: MAGTQSKFHRGQSSQGRQGTELG*RAVGGY Trigger: ATAACCACCTACTGCCCTCAATCCCAACTCAGTACC...CTGCCTCCCCTGGGAGCTCTGACCTCTGTGGAATTTGCTCTGTGTGCCAGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
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| 3UTR TCA 72 bp | GTGGAGAACTGGCGGCCCAGGCTCCTGGTTTCTGACTaGGGTGGCTGTCTTCTGTTTCCTCTTCCTATCACA | + |
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Preference number: 3 (lower is better) Translates to: VENWRPRLLVSD*GGCLLFPLPIT Trigger: TGTGATAGGAAGAGGAAACAGAAGACAGCCACCTCAGTCAGAAACCAGGAGCCTGGGCCGCCAGTTCTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
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| 3UTR TCA 72 bp | GTAGGTGGAGAACTGGCGGCCCAGGCTCCTGGTTTCTaGCTGAGGTGGCTGTCTTCTGTTTCCTCTTCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: VGGELAAQAPGF*LRWLSSVSSSY Trigger: ATAGGAAGAGGAAACAGAAGACAGCCACCTCAGTCAGAAACCAGGAGCCTGGGCCGCCAGTTCTCCACCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
||
| 3UTR CCA 72 bp | ATCACAAGTAGGTGGAGAACTGGCGGCCCAGGCTCCTaGTTTCTGACTGAGGTGGCTGTCTTCTGTTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: ITSRWRTGGPGS*FLTEVAVFCFL Trigger: GAGGAAACAGAAGACAGCCACCTCAGTCAGAAACCAGGAGCCTGGGCCGCCAGTTCTCCACCTACTTGTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
||
| 3UTR-3UTR CAA 90 bp | TTGCAGGGGAGGGAGCTTCTGTCCCCATGCTACACATCTGGATCCAGGGACCCCGTCTTAGTCTCTCCATaGCTCGTCTCTGCTTTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LQGRELLSPCYTSGSRDPVLVSP*LVSAFL Trigger: TAAGAAAGCAGAGACGAGCAATGGAGAGACTAAGAC...GGGGTCCCTGGATCCAGATGTGTAGCATGGGGACAGAAGCTCCCTCCCCTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
||
| 3UTR-3UTR CAA 90 bp | GGCACCAGGATGGCTGGCACACAGAGCAAATTCCACAGAGGTCAGAGCTCCCAGTACAGGGTCTTCAAGTaGCTGCTTCCATTCTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: GTRMAGTQSKFHRGQSSQYRVFK*LLPFWS Trigger: AGACCAGAATGGAAGCAGCAACTTGAAGACCCTGTA...CTGGGAGCTCTGACCTCTGTGGAATTTGCTCTGTGTGCCAGCCATCCTGGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| 3UTR CCA 72 bp | GTGACGTTTGTCATCAGAAAGGCAAACAGCCTGGCGTaGACTCCCTGCACGGTGTTCATAGCATCAGCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: VTFVIRKANSLA*TPCTVFIASAV Trigger: TACTGCTGATGCTATGAACACCGTGCAGGGAGTCCACGCCAGGCTGTTTGCCTTTCTGATGACAAACGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| 3UTR TCA 72 bp | TATAAGGGGCTGAGATTATTCTGGCAAAATGGAAGGTaGTGGTGTGAAGGCTGGGTGGACTCTGTGGGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: YKGLRLFWQNGR*WCEGWVDSVGA Trigger: GGCTCCCACAGAGTCCACCCAGCCTTCACACCATCACCTTCCATTTTGCCAGAATAATCTCAGCCCCTTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| 3UTR TCA 72 bp | CTGGTCTTCTGGAACAGAGTCTGCACATGTCTGAGGTaGCGTTTGTCATCAGAAAGGCAAACAGCCTGGCGT | + |
|
Preference number: 3 (lower is better) Translates to: LVFWNRVCTCLR*RLSSERQTAWR Trigger: ACGCCAGGCTGTTTGCCTTTCTGATGACAAACGTCACCTCAGACATGTGCAGACTCTGTTCCAGAAGACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| 3UTR CCA 72 bp | CTACACATCTGGATCCAGGGACCCCAAAGCTGTAACTaGGTCTTAGTCTCTCCATTGCTCGTCTCTGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LHIWIQGPQSCN*VLVSPLLVSAF Trigger: GAAAGCAGAGACGAGCAATGGAGAGACTAAGACCCAGTTACAGCTTTGGGGTCCCTGGATCCAGATGTGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
||
| 3UTR GCA 72 bp | CCAGGCAGGAAGCATGGCAGCATCCAGAAGACATTGTaGTTTGTGCTAGAGAAGGAGTCAAGAGTACATCTG | + |
|
Preference number: 3 (lower is better) Translates to: PGRKHGSIQKTL*FVLEKESRVHL Trigger: CAGATGTACTCTTGACTCCTTCTCTAGCACAAAGCACAATGTCTTCTGGATGCTGCCATGCTTCCTGCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
||
| 3UTR TCA 72 bp | TTTATAGGCCTAGTCCAGGACAGATGTTTCTGTAGGTaGTATCCATGGGCTCTACCCGGAGGAGTCATCGAT | + |
|
Preference number: 3 (lower is better) Translates to: FIGLVQDRCFCR*YPWALPGGVID Trigger: ATCGATGACTCCTCCGGGTAGAGCCCATGGATATCACCTACAGAAACATCTGTCCTGGACTAGGCCTATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
||
| 3UTR GCA 72 bp | CAGACAAGGACACTCCTGAGAGTTCTGCCTGCCTGTTaGCCTCCAAGAATGTTAAAGAAAACAGCTCTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: QTRTLLRVLPAC*PPRMLKKTALA Trigger: AGCTAGAGCTGTTTTCTTTAACATTCTTGGAGGGCAACAGGCAGGCAGAACTCTCAGGAGTGTCCTTGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
||
| 3UTR CCA 72 bp | CAGAGATTCAGTCCATTATCACCCAGGCAGGAAGCATaGCAGCATCCAGAAGACATTGTGCTTTGTGCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: QRFSPLSPRQEA*QHPEDIVLCAR Trigger: TCTAGCACAAAGCACAATGTCTTCTGGATGCTGCCATGCTTCCTGCCTGGGTGATAATGGACTGAATCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
||
| 3UTR TCA 72 bp | CTACCCGGAGGAGTCATCGATAGATGGTCACATGAATaGCTTTGTGTAAGACACCAGCAAACAGACAAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LPGGVIDRWSHE*LCVRHQQTDKD Trigger: GTCCTTGTCTGTTTGCTGGTGTCTTACACAAAGTCATTCATGTGACCATCTATCGATGACTCCTCCGGGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
||
| 3UTR TCA 72 bp | AGAATGTGTGGCAGTTTTACACTCTTGCTGTTTCAGTaGGAGTCAGAGATAAGGGGACTGTCTCTGCTCACC | + |
|
Preference number: 3 (lower is better) Translates to: RMCGSFTLLLFQ*ESEIRGLSLLT Trigger: GGTGAGCAGAGACAGTCCCCTTATCTCTGACTCTCACTGAAACAGCAAGAGTGTAAAACTGCCACACATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
||
| 3UTR TCA 72 bp | AGCCCGCCTTTCTGCTCAGACATTTCTATAAGGGGCTaGGATTATTCTGGCAAAATGGAAGGTGATGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SPPFCSDISIRG*DYSGKMEGDGV Trigger: CACACCATCACCTTCCATTTTGCCAGAATAATCTCAGCCCCTTATAGAAATGTCTGAGCAGAAAGGCGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTCAGCTCGGAAACGTATGTGTTTTGAGGACAAGCACTTACTTCGTTTCCTTTGGTACTGAGTTGGGATaGAGGGCAGTAGGTGGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: SQLGNVCVLRTSTYFVSFGTELG*RAVGGY Trigger: ATAACCACCTACTGCCCTCAATCCCAACTCAGTACC...AAAGGAAACGAAGTAAGTGCTTGTCCTCAAAACACATACGTTTCCGAGCTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAGCTCGGAAACGTATGTGTTTTGAGGACAAGCACTTACTTCGTTTCCTTTGCTACAGGGTCTTCAAGTaGCTGCTTCCATTCTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SARKRMCFEDKHLLRFLCYRVFK*LLPFWS Trigger: AGACCAGAATGGAAGCAGCAACTTGAAGACCCTGTA...GCAAAGGAAACGAAGTAAGTGCTTGTCCTCAAAACACATACGTTTCCGAGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| 3UTR TCA 72 bp | TGCAGCTTGGACAAGGGGCATGCCTTCAGCCCACTATaGCTAATCTTTCTCTTGTCATTGAATCAAGCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: CSLDKGHAFSPL*LIFLLSLNQAY Trigger: ATAGGCTTGATTCAATGACAAGAGAAAGATTAGTCATAGTGGGCTGAAGGCATGCCCCTTGTCCAAGCTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| 3UTR TCA 72 bp | GAAACTTATAAGGGGCAACATTTAATTGGGGTTGGCTaGCAGGTTCAGAGATTCAGTCCATTATCACCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: ETYKGQHLIGVG*QVQRFSPLSPR Trigger: CCTGGGTGATAATGGACTGAATCTCTGAACCTGTCAGCCAACCCCAATTAAATGTTGCCCCTTATAAGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
||
| 3UTR TCA 72 bp | GATGTTGGAGGAATTATTAAGATCACTCTTGGGTACTaGGTTGGGATTGAGGGCAGTAGGTGGTTATTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: DVGGIIKITLGY*VGIEGSRWLLK Trigger: CTTCAATAACCACCTACTGCCCTCAATCCCAACTCAGTACCCAAGAGTGATCTTAATAATTCCTCCAACATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| 3UTR GCA 72 bp | ATGTGTTTTGAGGACAAGCACTTACTTCGTTTCCTTTaGTCTATCCCATATCCTTGTCCCCATTCTAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: MCFEDKHLLRFL*SIPYPCPHSKA Trigger: AGCCTTAGAATGGGGACAAGGATATGGGATAGAGCAAAGGAAACGAAGTAAGTGCTTGTCCTCAAAACACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR TCA 90 bp | GCAAATTCCACAGAGGTCAGAGCTCCCAGGGGAGGCAGAAGAGCGAATTCCATGCAACAGCTTGCTCCGTaGGACGGATCTCCTGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ANSTEVRAPRGGRRANSMQQLAP*DGSPAP Trigger: GGGGGCAGGAGATCCGTCTCACGGAGCAAGCTGTTG...CATGGAATTCGCTCTTCTGCCTCCCCTGGGAGCTCTGACCTCTGTGGAATTTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR TCA 90 bp | GGCACCAGGATGGCTGGCACACAGAGCAAATTCCACAGAGGTCAGAGCTCCCAGTGTTGGTCCAGCCAGTaGTCCTGGGCCTGCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GTRMAGTQSKFHRGQSSQCWSSQ*SWACFS Trigger: ACTGAAGCAGGCCCAGGATCACTGGCTGGACCAACA...CTGGGAGCTCTGACCTCTGTGGAATTTGCTCTGTGTGCCAGCCATCCTGGTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR GCA 90 bp | ATGGCTGGCACACAGAGCAAATTCCACAGAGGTCAGAGCTCCCAGGGGAGGCAGTCCCTGGTCTGTTCTTaGCGCCATGGAGTTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: MAGTQSKFHRGQSSQGRQSLVCS*RHGVPG Trigger: GCCAGGAACTCCATGGCGGCAAGAACAGACCAGGGA...CTGCCTCCCCTGGGAGCTCTGACCTCTGTGGAATTTGCTCTGTGTGCCAGCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR TCA 90 bp | GGCACCAGGATGGCTGGCACACAGAGCAAATTCCACAGAGGTCAGAGCTCCCAGAGTCATGGTTGCCGCTaGCCATCACCAGTGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: GTRMAGTQSKFHRGQSSQSHGCR*PSPVGC Trigger: ACATCCCACTGGTGATGGTCAGCGGCAACCATGACT...CTGGGAGCTCTGACCTCTGTGGAATTTGCTCTGTGTGCCAGCCATCCTGGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR TCA 90 bp | GGAGGTCTCAAAGCCCACCCCTACAGTGACATACTTCTTCCAACAAGGCCACAACAACAGCTTGCTCCGTaGGACGGATCTCCTGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GGLKAHPYSDILLPTRPQQQLAP*DGSPAP Trigger: GGGGGCAGGAGATCCGTCTCACGGAGCAAGCTGTTG...TTGTGGCCTTGTTGGAAGAAGTATGTCACTGTAGGGGTGGGCTTTGAGACCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
||
| CDS-3UTR TCA 90 bp | GCAAATTCCACAGAGGTCAGAGCTCCCAGGGGAGGCAGAAGAGCGAATTCCATGTGTTGGTCCAGCCAGTaGTCCTGGGCCTGCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ANSTEVRAPRGGRRANSMCWSSQ*SWACFS Trigger: ACTGAAGCAGGCCCAGGATCACTGGCTGGACCAACA...CATGGAATTCGCTCTTCTGCCTCCCCTGGGAGCTCTGACCTCTGTGGAATTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR GCA 90 bp | GGAGGTCTCAAAGCCCACCCCTACAGTGACATACTTCTTCCAACAAGGCCACAAGTGAGACGGATCTCCTaGCCCCACTCGTCACCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGLKAHPYSDILLPTRPQVRRIS*PHSSPP Trigger: TGGCGGTGACGAGTGGGGGCAGGAGATCCGTCTCAC...TTGTGGCCTTGTTGGAAGAAGTATGTCACTGTAGGGGTGGGCTTTGAGACCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
||
| CDS-3UTR GCA 90 bp | ATGGCTGGCACACAGAGCAAATTCCACAGAGGTCAGAGCTCCCAGGGGAGGCAGCACAGCTCTGATACCTaGTCTGGTGAGCTTTTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: MAGTQSKFHRGQSSQGRQHSSDT*SGELFG Trigger: GCCGAAAAGCTCACCAGAGCAGGTATCAGAGCTGTG...CTGCCTCCCCTGGGAGCTCTGACCTCTGTGGAATTTGCTCTGTGTGCCAGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR CCA 90 bp | GCAAATTCCACAGAGGTCAGAGCTCCCAGGGGAGGCAGAAGAGCGAATTCCATGCGTCACAGTTCCCGGTaGACCAGGCCTTCATCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ANSTEVRAPRGGRRANSMRHSSR*TRPSSV Trigger: GACTGATGAAGGCCTGGTCCACCGGGAACTGTGACG...CATGGAATTCGCTCTTCTGCCTCCCCTGGGAGCTCTGACCTCTGTGGAATTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR CCA 90 bp | ATGGCTGGCACACAGAGCAAATTCCACAGAGGTCAGAGCTCCCAGGGGAGGCAGATGGAGTTCCTGGCATaGCATGAACGAGGTCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: MAGTQSKFHRGQSSQGRQMEFLA*HERGHH Trigger: GTGGTGACCTCGTTCATGCCATGCCAGGAACTCCAT...CTGCCTCCCCTGGGAGCTCTGACCTCTGTGGAATTTGCTCTGTGTGCCAGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR GCA 90 bp | GTAGGACCCAGCAGTTTGACTGATGTGAAAGCACATCTGTTTACAAGCCCGCCTCGGCTGTGGGGGCATTaGCCAAGTCATGGTTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VGPSSLTDVKAHLFTSPPRLWGH*PSHGCR Trigger: GCGGCAACCATGACTTGGGCAATGCCCCCACAGCCG...AGGCGGGCTTGTAAACAGATGTGCTTTCACATCAGTCAAACTGCTGGGTCCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR CCA 90 bp | GGCACCAGGATGGCTGGCACACAGAGCAAATTCCACAGAGGTCAGAGCTCCCAGGCATCGTACAAGAACTaGGAGTTGAGCACCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GTRMAGTQSKFHRGQSSQASYKN*ELSTRN Trigger: GTTCCTGGTGCTCAACTCCCAGTTCTTGTACGATGC...CTGGGAGCTCTGACCTCTGTGGAATTTGCTCTGTGTGCCAGCCATCCTGGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR TCA 90 bp | CTTCTGGAACAGAGTCTGCACATGTCTGAGGTGACGTTTGTCATCAGAAAGGCACAACAGCTTGCTCCGTaGGACGGATCTCCTGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLEQSLHMSEVTFVIRKAQQLAP*DGSPAP Trigger: GGGGGCAGGAGATCCGTCTCACGGAGCAAGCTGTTG...TGCCTTTCTGATGACAAACGTCACCTCAGACATGTGCAGACTCTGTTCCAGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTGGAACAGAGTCTGCACATGTCTGAGGTGACGTTTGTCATCAGAAAGGCAGTGAGACGGATCTCCTaGCCCCACTCGTCACCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLEQSLHMSEVTFVIRKAVRRIS*PHSSPP Trigger: TGGCGGTGACGAGTGGGGGCAGGAGATCCGTCTCAC...TGCCTTTCTGATGACAAACGTCACCTCAGACATGTGCAGACTCTGTTCCAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR GCA 90 bp | GTCTCTGCTTTCTTACTACCGTGGAGGCCCAGAATGTGTGGCAGTTTTACACTCCGGCTCCTCCTCGCTTaGTCCTTTCCTCTTCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSAFLLPWRPRMCGSFTLRLLLA*SFPLPS Trigger: GGAGGGAAGAGGAAAGGAGCAAGCGAGGAGGAGCCG...GAGTGTAAAACTGCCACACATTCTGGGCCTCCACGGTAGTAAGAAAGCAGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
||
| CDS-3UTR GCA 90 bp | TGGGCAGGAAAGGGGAAGAAGTCATGGAAGCTAACTGACTCTGATGGGAATGATACGGGGCTGTGGGCCTaGCTGAGACAGGACGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: WAGKGKKSWKLTDSDGNDTGLWA*LRQDGT Trigger: AGTACCGTCCTGTCTCAGGCAGGCCCACAGCCCCGT...ATCATTCCCATCAGAGTCAGTTAGCTTCCATGACTTCTTCCCCTTTCCTGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
||
| CDS-3UTR CCA 90 bp | GCAAATTCCACAGAGGTCAGAGCTCCCAGGGGAGGCAGAAGAGCGAATTCCATGATGGAGTTCCTGGCATaGCATGAACGAGGTCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: ANSTEVRAPRGGRRANSMMEFLA*HERGHH Trigger: GTGGTGACCTCGTTCATGCCATGCCAGGAACTCCAT...CATGGAATTCGCTCTTCTGCCTCCCCTGGGAGCTCTGACCTCTGTGGAATTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| 3UTR CAA 72 bp | GGACCCCAAAGCTGTAACTGGGTCTTAGTCTCTCCATaGCTCGTCTCTGCTTTCTTACTACCGTGGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GPQSCNWVLVSP*LVSAFLLPWRP Trigger: GGGCCTCCACGGTAGTAAGAAAGCAGAGACGAGCAATGGAGAGACTAAGACCCAGTTACAGCTTTGGGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
||
| CDS-3UTR TCA 90 bp | CCCATGCTACACATCTGGATCCAGGGACCCCAAAGCTGTAACTGGGTCTTAGTCTTCCCGTTCCTTTTCTaGGGAAAACGCGTCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PMLHIWIQGPQSCNWVLVFPFLF*GKRVQG Trigger: ACCCTGGACGCGTTTTCCTCAGAAAAGGAACGGGAA...GACTAAGACCCAGTTACAGCTTTGGGGTCCCTGGATCCAGATGTGTAGCATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
||
| CDS-3UTR TCA 90 bp | CCAAATATCCCCAGACACTGCTTGTCTTTCCTACCCTGGTCTTCAGGCCATTTCCCTCCTGGCATGGCATaGACGAGGTCACCACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PNIPRHCLSFLPWSSGHFPPGMA*TRSPHR Trigger: TCTGTGTGGTGACCTCGTTCATGCCATGCCAGGAGG...GAAATGGCCTGAAGACCAGGGTAGGAAAGACAAGCAGTGTCTGGGGATATTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
||
| CDS-3UTR TCA 90 bp | GTCTCTGCTTTCTTACTACCGTGGAGGCCCAGAATGTGTGGCAGTTTTACACTCCAGGACGGTACTAAGTaGGGGTCGGGGAGAAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VSAFLLPWRPRMCGSFTLQDGTK*GSGRRK Trigger: CTTCCTTCTCCCCGACCCTCACTTAGTACCGTCCTG...GAGTGTAAAACTGCCACACATTCTGGGCCTCCACGGTAGTAAGAAAGCAGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
||
| CDS-3UTR CCA 90 bp | ACAAGGACACTCCTGAGAGTTCTGCCTGCCTGTTGCCCTCCAAGAATGTTAAAGCGTCACAGTTCCCGGTaGACCAGGCCTTCATCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TRTLLRVLPACCPPRMLKRHSSR*TRPSSV Trigger: GACTGATGAAGGCCTGGTCCACCGGGAACTGTGACG...CTTTAACATTCTTGGAGGGCAACAGGCAGGCAGAACTCTCAGGAGTGTCCTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
||
| CDS-3UTR GCA 90 bp | GCAAATTCCACAGAGGTCAGAGCTCCCAGGGGAGGCAGAAGAGCGAATTCCATGTGCTGGCACTGTTTCTaGTCTGCAATGTTCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ANSTEVRAPRGGRRANSMCWHCF*SAMFSC Trigger: ACAGCTGAACATTGCAGAGCAGAAACAGTGCCAGCA...CATGGAATTCGCTCTTCTGCCTCCCCTGGGAGCTCTGACCTCTGTGGAATTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR GCA 90 bp | TGGCCCTGGTTACTTAGGCACCAGGATGGCTGGCACACAGAGCAAATTCCACAGTGCTGGCACTGTTTCTaGTCTGCAATGTTCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WPWLLRHQDGWHTEQIPQCWHCF*SAMFSC Trigger: ACAGCTGAACATTGCAGAGCAGAAACAGTGCCAGCA...CTGTGGAATTTGCTCTGTGTGCCAGCCATCCTGGTGCCTAAGTAACCAGGGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR GCA 90 bp | AGTCAGCTCGGAAACGTATGTGTTTTGAGGACAAGCACTTACTTCGTTTCCTTTGTGAGACGGATCTCCTaGCCCCACTCGTCACCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQLGNVCVLRTSTYFVSFVRRIS*PHSSPP Trigger: TGGCGGTGACGAGTGGGGGCAGGAGATCCGTCTCAC...AAAGGAAACGAAGTAAGTGCTTGTCCTCAAAACACATACGTTTCCGAGCTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR GCA 90 bp | TCAGCTCGGAAACGTATGTGTTTTGAGGACAAGCACTTACTTCGTTTCCTTTGCTCCCTGGTCTGTTCTTaGCGCCATGGAGTTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SARKRMCFEDKHLLRFLCSLVCS*RHGVPG Trigger: GCCAGGAACTCCATGGCGGCAAGAACAGACCAGGGA...GCAAAGGAAACGAAGTAAGTGCTTGTCCTCAAAACACATACGTTTCCGAGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR GCA 90 bp | ATGTGTTTTGAGGACAAGCACTTACTTCGTTTCCTTTGCTCTATCCCATATCCTCGGCTGTGGGGGCATTaGCCAAGTCATGGTTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: MCFEDKHLLRFLCSIPYPRLWGH*PSHGCR Trigger: GCGGCAACCATGACTTGGGCAATGCCCCCACAGCCG...AGGATATGGGATAGAGCAAAGGAAACGAAGTAAGTGCTTGTCCTCAAAACACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR CCA 90 bp | TCAGCTCGGAAACGTATGTGTTTTGAGGACAAGCACTTACTTCGTTTCCTTTGCCCGCCATGGAGTTCCTaGCATGGCATGAACGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SARKRMCFEDKHLLRFLCPPWSS*HGMNEV Trigger: GACCTCGTTCATGCCATGCCAGGAACTCCATGGCGG...GCAAAGGAAACGAAGTAAGTGCTTGTCCTCAAAACACATACGTTTCCGAGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR CCA 90 bp | ATTTTAGGACCAGGGACCTCTCCTGATCTCTTATACTCTGCTGTAAGAAACAAAACCACACGGAGCCCGTaGGTGTCTTTGCCCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ILGPGTSPDLLYSAVRNKTTRSP*VSLPSW Trigger: CCAGCTGGGCAAAGACACCCACGGGCTCCGTGTGGT...TTTGTTTCTTACAGCAGAGTATAAGAGATCAGGAGAGGTCCCTGGTCCTAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| 3UTR CAA 72 bp | CACCCAGGCAGGAAGCATGGCAGCATCCAGAAGACATaGTGCTTTGTGCTAGAGAAGGAGTCAAGAGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: HPGRKHGSIQKT*CFVLEKESRVH Trigger: ATGTACTCTTGACTCCTTCTCTAGCACAAAGCACAATGTCTTCTGGATGCTGCCATGCTTCCTGCCTGGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
||
| 3UTR CAA 72 bp | CACAGGGAAACATGTGGGCTGTACAGGGTCTTCAAGTaGCTGCTTCCATTCTGGTCTTCTGGAACAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HRETCGLYRVFK*LLPFWSSGTES Trigger: AGACTCTGTTCCAGAAGACCAGAATGGAAGCAGCAACTTGAAGACCCTGTACAGCCCACATGTTTCCCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| 3UTR CAA 72 bp | GTGTCTTGCTATCTGAGTTACATAGATTACACACTTTaGCTCCCCACATCAGCAGGCCCCACAGGGATACCG | + |
|
Preference number: 4 (lower is better) Translates to: VSCYLSYIDYTL*LPTSAGPTGIP Trigger: CGGTATCCCTGTGGGGCCTGCTGATGTGGGGAGCAAAAGTGTGTAATCTATGTAACTCAGATAGCAAGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR CCA 90 bp | TCAGCTCGGAAACGTATGTGTTTTGAGGACAAGCACTTACTTCGTTTCCTTTGCTCGTCTCCCCATGTCTaGCAGAACTCCTCCACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SARKRMCFEDKHLLRFLCSSPHV*QNSSTV Trigger: GACTGTGGAGGAGTTCTGCCAGACATGGGGAGACGA...GCAAAGGAAACGAAGTAAGTGCTTGTCCTCAAAACACATACGTTTCCGAGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTGGAACAGAGTCTGCACATGTCTGAGGTGACGTTTGTCATCAGAAAGGCAGCATCGTACAAGAACTaGGAGTTGAGCACCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLEQSLHMSEVTFVIRKAASYKN*ELSTRN Trigger: GTTCCTGGTGCTCAACTCCCAGTTCTTGTACGATGC...TGCCTTTCTGATGACAAACGTCACCTCAGACATGTGCAGACTCTGTTCCAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR TCA 90 bp | AAGGAAAGGCAGTTCTCTTTTGAAATAAGGGTAGGACCCAGCAGTTTGACTGATGTTCCTGGCATGGCATaGACGAGGTCACCACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KERQFSFEIRVGPSSLTDVPGMA*TRSPHR Trigger: TCTGTGTGGTGACCTCGTTCATGCCATGCCAGGAAC...ATCAGTCAAACTGCTGGGTCCTACCCTTATTTCAAAAGAGAACTGCCTTTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR TCA 90 bp | AAGGAAAGGCAGTTCTCTTTTGAAATAAGGGTAGGACCCAGCAGTTTGACTGATAGTCATGGTTGCCGCTaGCCATCACCAGTGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: KERQFSFEIRVGPSSLTDSHGCR*PSPVGC Trigger: ACATCCCACTGGTGATGGTCAGCGGCAACCATGACT...ATCAGTCAAACTGCTGGGTCCTACCCTTATTTCAAAAGAGAACTGCCTTTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR TCA 90 bp | TGTCTTATCAAGGAAAGGCAGTTCTCTTTTGAAATAAGGGTAGGACCCAGCAGTACAAGAACTGGGAGTTaGGCACCAGGAACAGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: CLIKERQFSFEIRVGPSSTRTGS*APGTGR Trigger: GCGTCCTGTTCCTGGTGCTCAACTCCCAGTTCTTGT...ACTGCTGGGTCCTACCCTTATTTCAAAAGAGAACTGCCTTTCCTTGATAAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR TCA 90 bp | GTAGGACCCAGCAGTTTGACTGATGTGAAAGCACATCTGTTTACAAGCCCGCCTGCACCCGATAGCAGATaGAACTACCATGTCAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: VGPSSLTDVKAHLFTSPPAPDSR*NYHVKI Trigger: AATCTTGACATGGTAGTTTCATCTGCTATCGGGTGC...AGGCGGGCTTGTAAACAGATGTGCTTTCACATCAGTCAAACTGCTGGGTCCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR CCA 90 bp | TCGTCTCTGCTTTCTTACTACCGTGGAGGCCCAGAATGTGTGGCAGTTTTACACTTGGACGAAGTAGAATaGACCTTTCCATTCCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSLLSYYRGGPECVAVLHLDEVE*TFPFPF Trigger: GAACGGGAATGGAAAGGTCCATTCTACTTCGTCCAA...GTGTAAAACTGCCACACATTCTGGGCCTCCACGGTAGTAAGAAAGCAGAGACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
||
| CDS-3UTR CCA 90 bp | ATTTTAGGACCAGGGACCTCTCCTGATCTCTTATACTCTGCTGTAAGAAACAAACGTCACAGTTCCCGGTaGACCAGGCCTTCATCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ILGPGTSPDLLYSAVRNKRHSSR*TRPSSV Trigger: GACTGATGAAGGCCTGGTCCACCGGGAACTGTGACG...TTTGTTTCTTACAGCAGAGTATAAGAGATCAGGAGAGGTCCCTGGTCCTAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR CCA 90 bp | ATTTTAGGACCAGGGACCTCTCCTGATCTCTTATACTCTGCTGTAAGAAACAAACCGCCATGGAGTTCCTaGCATGGCATGAACGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ILGPGTSPDLLYSAVRNKPPWSS*HGMNEV Trigger: GACCTCGTTCATGCCATGCCAGGAACTCCATGGCGG...TTTGTTTCTTACAGCAGAGTATAAGAGATCAGGAGAGGTCCCTGGTCCTAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR CCA 90 bp | AAGGAAAGGCAGTTCTCTTTTGAAATAAGGGTAGGACCCAGCAGTTTGACTGATCTGTTCTTGCCGCCATaGAGTTCCTGGCATGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: KERQFSFEIRVGPSSLTDLFLPP*SSWHGM Trigger: CATGCCATGCCAGGAACTCCATGGCGGCAAGAACAG...ATCAGTCAAACTGCTGGGTCCTACCCTTATTTCAAAAGAGAACTGCCTTTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR CCA 90 bp | AGTCAGCTCGGAAACGTATGTGTTTTGAGGACAAGCACTTACTTCGTTTCCTTTTCGTCTCCCCATGTCTaGCAGAACTCCTCCACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SQLGNVCVLRTSTYFVSFSSPHV*QNSSTV Trigger: GACTGTGGAGGAGTTCTGCCAGACATGGGGAGACGA...AAAGGAAACGAAGTAAGTGCTTGTCCTCAAAACACATACGTTTCCGAGCTGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR TCA 90 bp | ATGTGTTTTGAGGACAAGCACTTACTTCGTTTCCTTTGCTCTATCCCATATCCTGTTCCTGGCATGGCATaGACGAGGTCACCACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: MCFEDKHLLRFLCSIPYPVPGMA*TRSPHR Trigger: TCTGTGTGGTGACCTCGTTCATGCCATGCCAGGAAC...AGGATATGGGATAGAGCAAAGGAAACGAAGTAAGTGCTTGTCCTCAAAACACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR TCA 90 bp | ATGTGTTTTGAGGACAAGCACTTACTTCGTTTCCTTTGCTCTATCCCATATCCTACAAGAACTGGGAGTTaGGCACCAGGAACAGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: MCFEDKHLLRFLCSIPYPTRTGS*APGTGR Trigger: GCGTCCTGTTCCTGGTGCTCAACTCCCAGTTCTTGT...AGGATATGGGATAGAGCAAAGGAAACGAAGTAAGTGCTTGTCCTCAAAACACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR CCA 90 bp | ATTTTAGGACCAGGGACCTCTCCTGATCTCTTATACTCTGCTGTAAGAAACAAACTGTTCTTGCCGCCATaGAGTTCCTGGCATGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: ILGPGTSPDLLYSAVRNKLFLPP*SSWHGM Trigger: CATGCCATGCCAGGAACTCCATGGCGGCAAGAACAG...TTTGTTTCTTACAGCAGAGTATAAGAGATCAGGAGAGGTCCCTGGTCCTAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR TCA 90 bp | ATTTTAGGACCAGGGACCTCTCCTGATCTCTTATACTCTGCTGTAAGAAACAAATTCCCGTTCCTTTTCTaGGGAAAACGCGTCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ILGPGTSPDLLYSAVRNKFPFLF*GKRVQG Trigger: ACCCTGGACGCGTTTTCCTCAGAAAAGGAACGGGAA...TTTGTTTCTTACAGCAGAGTATAAGAGATCAGGAGAGGTCCCTGGTCCTAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000096272.11 |
||
| CDS-3UTR GCA 90 bp | GTCTCTGCTTTCTTACTACCGTGGAGGCCCAGAATGTGTGGCAGTTTTACACTCTCCAGAAGCATCTGCTaGTTATGTATCCAAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: VSAFLLPWRPRMCGSFTLSRSIC*LCIQEL Trigger: AAGTTCTTGGATACATAAGCAGCAGATGCTTCTGGA...GAGTGTAAAACTGCCACACATTCTGGGCCTCCACGGTAGTAAGAAAGCAGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
||
| CDS-3UTR GCA 90 bp | ATGTGTTTTGAGGACAAGCACTTACTTCGTTTCCTTTGCTCTATCCCATATCCTCACAGCTCTGATACCTaGTCTGGTGAGCTTTTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: MCFEDKHLLRFLCSIPYPHSSDT*SGELFG Trigger: GCCGAAAAGCTCACCAGAGCAGGTATCAGAGCTGTG...AGGATATGGGATAGAGCAAAGGAAACGAAGTAAGTGCTTGTCCTCAAAACACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| 3UTR CAA 72 bp | CAGTTCTCTTTTGAAATAAGGGTAGGACCCAGCAGTTaGACTGATGTGAAAGCACATCTGTTTACAAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QFSFEIRVGPSS*TDVKAHLFTSP Trigger: CGGGCTTGTAAACAGATGTGCTTTCACATCAGTCAAACTGCTGGGTCCTACCCTTATTTCAAAAGAGAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR GCA 90 bp | ATTTTAGGACCAGGGACCTCTCCTGATCTCTTATACTCTGCTGTAAGAAACAAAGCACTGTTTCTGCTCTaGAATGTTCAGCTGTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ILGPGTSPDLLYSAVRNKALFLL*NVQLLV Trigger: GACCAACAGCTGAACATTGCAGAGCAGAAACAGTGC...TTTGTTTCTTACAGCAGAGTATAAGAGATCAGGAGAGGTCCCTGGTCCTAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR GCA 90 bp | ATGTGTTTTGAGGACAAGCACTTACTTCGTTTCCTTTGCTCTATCCCATATCCTGCACTGTTTCTGCTCTaGAATGTTCAGCTGTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: MCFEDKHLLRFLCSIPYPALFLL*NVQLLV Trigger: GACCAACAGCTGAACATTGCAGAGCAGAAACAGTGC...AGGATATGGGATAGAGCAAAGGAAACGAAGTAAGTGCTTGTCCTCAAAACACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR TCA 90 bp | ATGTGTTTTGAGGACAAGCACTTACTTCGTTTCCTTTGCTCTATCCCATATCCTGCACCCGATAGCAGATaGAACTACCATGTCAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: MCFEDKHLLRFLCSIPYPAPDSR*NYHVKI Trigger: AATCTTGACATGGTAGTTTCATCTGCTATCGGGTGC...AGGATATGGGATAGAGCAAAGGAAACGAAGTAAGTGCTTGTCCTCAAAACACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR CCA 90 bp | ATTTTAGGACCAGGGACCTCTCCTGATCTCTTATACTCTGCTGTAAGAAACAAATTGGACGAAGTAGAATaGACCTTTCCATTCCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILGPGTSPDLLYSAVRNKLDEVE*TFPFPF Trigger: GAACGGGAATGGAAAGGTCCATTCTACTTCGTCCAA...TTTGTTTCTTACAGCAGAGTATAAGAGATCAGGAGAGGTCCCTGGTCCTAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096272.11 |
||
| 3UTR CAA 72 bp | CTTTGCGGTTCATTTATAACCAGTGGGTTTTTAAAGTaGGTTTCAGATTCTATAGTGTCGCTGCAGGATACT | + |
|
Preference number: 4 (lower is better) Translates to: LCGSFITSGFLK*VSDSIVSLQDT Trigger: AGTATCCTGCAGCGACACTATAGAATCTGAAACCAACTTTAAAAACCCACTGGTTATAAATGAACCGCAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| 3UTR CAA 72 bp | TTTAAGAAAAGGCCTAGGAGAGAACAGAATAGTGTCTaGCTATCTGAGTTACATAGATTACACACTTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FKKRPRREQNSV*LSELHRLHTFA Trigger: AGCAAAAGTGTGTAATCTATGTAACTCAGATAGCAAGACACTATTCTGTTCTCTCCTAGGCCTTTTCTTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS CCA 90 bp | GGATCTCCTGCCCCCACTCGTCACCGCCAGCGTCACAGTTCCCGGTaGACCAGGCCTTCATCAGTCCAAACTGAGTGTCTGCGCCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSPAPTRHRQRHSSR*TRPSSVQTECLRLR Trigger: CCTCAGGCGCAGACACTCAGTTTGGACTGATGAAGGCCTGGTCCACCGGGAACTGTGACGCTGGCGGTGACGAGTGGGGGCAGGAGATCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121750.2 |
||
| CDS GCA 90 bp | AGCTTGTTGATGGCCTCAACAGCTTGCTCCGTGAGACGGATCTCCTaGCCCCACTCGTCACCGCCAGCGTCACAGTTCCCGGTGGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLLMASTACSVRRIS*PHSSPPASQFPVDQ Trigger: CTGGTCCACCGGGAACTGTGACGCTGGCGGTGACGAGTGGGGGCAGGAGATCCGTCTCACGGAGCAAGCTGTTGAGGCCATCAACAAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073371.7 ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
||
| CDS CCA 90 bp | GGATCTCCTGCCCCCACTCGTCACCGCCAGCGTCACAGTTCCCGGTaGACCAGGCCTTCATCAGTCCAAACTGAGTGTCTGCGCCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GSPAPTRHRQRHSSR*TRPSSVQTECLRLG Trigger: TCCAAGGCGCAGACACTCAGTTTGGACTGATGAAGGCCTGGTCCACCGGGAACTGTGACGCTGGCGGTGACGAGTGGGGGCAGGAGATCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000073371.7 ENSMUST00000096272.11 ENSMUST00000127972.8 |
||
| CDS CCA 90 bp | CAGAACTCCTCCACAGTCTCGGCTGTGGGGGCATTGCCCAAGTCATaGTTGCCGCTGACCATCACCAGTGGGATGTCCTGGTCGACGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QNSSTVSAVGALPKS*LPLTITSGMSWSTA Trigger: AGCCGTCGACCAGGACATCCCACTGGTGATGGTCAGCGGCAACCATGACTTGGGCAATGCCCCCACAGCCGAGACTGTGGAGGAGTTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
||
| CDS-3UTR CAA 90 bp | ATGGCTGGCACACAGAGCAAATTCCACAGAGGTCAGAGCTCCCAGGGGAGGCAGTCGGCTGTGGGGGCATaGCCCAAGTCATGGTTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: MAGTQSKFHRGQSSQGRQSAVGA*PKSWLP Trigger: CGGCAACCATGACTTGGGCAATGCCCCCACAGCCGA...CTGCCTCCCCTGGGAGCTCTGACCTCTGTGGAATTTGCTCTGTGTGCCAGCCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS TCA 90 bp | CCACAGTCTCGGCTGTGGGGGCATTGCCCAAGTCATGGTTGCCGCTaGCCATCACCAGTGGGATGTCCTGGTCGACGGCTTTCAGTACTC | + |
|
Preference number: 5 (lower is better) Translates to: PQSRLWGHCPSHGCR*PSPVGCPGRRLSVL Trigger: GAGTACTGAAAGCCGTCGACCAGGACATCCCACTGGTGATGGTCAGCGGCAACCATGACTTGGGCAATGCCCCCACAGCCGAGACTGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
||
| CDS CCA 90 bp | TGTGGGGGCATTGCCCAAGTCATGGTTGCCGCTGACCATCACCAGTaGGATGTCCTGGTCGACGGCTTTCAGTACTCGCTGCAGGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: CGGIAQVMVAADHHQ*DVLVDGFQYSLQVP Trigger: AGGGACCTGCAGCGAGTACTGAAAGCCGTCGACCAGGACATCCCACTGGTGATGGTCAGCGGCAACCATGACTTGGGCAATGCCCCCACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
||
| CDS GCA 90 bp | ACCATCACCAGTGGGATGTCCTGGTCGACGGCTTTCAGTACTCGCTaGAGGTCCCTGGTCTGTTCTTGCCGCCATGGAGTTCCTGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: TITSGMSWSTAFSTR*RSLVCSCRHGVPGM Trigger: CATGCCAGGAACTCCATGGCGGCAAGAACAGACCAGGGACCTGCAGCGAGTACTGAAAGCCGTCGACCAGGACATCCCACTGGTGATGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
||
| CDS-3UTR CAA 90 bp | TGGCCCTGGTTACTTAGGCACCAGGATGGCTGGCACACAGAGCAAATTCCACAGAGCCCGTGGGTGTCTTaGCCCAGCTGGCACCCGATA | + |
|
Preference number: 5 (lower is better) Translates to: WPWLLRHQDGWHTEQIPQSPWVS*PSWHPI Trigger: TATCGGGTGCCAGCTGGGCAAAGACACCCACGGGCT...CTGTGGAATTTGCTCTGTGTGCCAGCCATCCTGGTGCCTAAGTAACCAGGGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS CCA 90 bp | TTGCCCAAGTCATGGTTGCCGCTGACCATCACCAGTGGGATGTCCTaGTCGACGGCTTTCAGTACTCGCTGCAGGTCCCTGGTCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPKSWLPLTITSGMS*STAFSTRCRSLVCS Trigger: AGAACAGACCAGGGACCTGCAGCGAGTACTGAAAGCCGTCGACCAGGACATCCCACTGGTGATGGTCAGCGGCAACCATGACTTGGGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
||
| CDS TCA 90 bp | ACGGAGCCCGTGGGTGTCTTTGCCCAGCTGGCACCCGATAGCAGATaGAACTACCATGTCAAGATTCTGGTAGGTTCCCCCGGCATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TEPVGVFAQLAPDSR*NYHVKILVGSPGIP Trigger: AGGAATGCCGGGGGAACCTACCAGAATCTTGACATGGTAGTTTCATCTGCTATCGGGTGCCAGCTGGGCAAAGACACCCACGGGCTCCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS GCA 90 bp | AAGAATTTGGGTTTAGGGTTCAGCTTGTTGATGGCCTCAACAGCTTaGTCCGTGAGACGGATCTCCTGCCCCCACTCGTCACCGCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: KNLGLGFSLLMASTA*SVRRISCPHSSPPA Trigger: CGCTGGCGGTGACGAGTGGGGGCAGGAGATCCGTCTCACGGAGCAAGCTGTTGAGGCCATCAACAAGCTGAACCCTAAACCCAAATTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000073371.7 ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
||
| CDS GCA 90 bp | CCCGGCATTCCTGTGGTAGTGCCCGGAGAACACAGCTCTGATACCTaGTCTGGTGAGCTTTTCGGCCAGTTCCTTACGGACGGTCTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: PGIPVVVPGEHSSDT*SGELFGQFLTDGLS Trigger: ACTAAGACCGTCCGTAAGGAACTGGCCGAAAAGCTCACCAGAGCAGGTATCAGAGCTGTGTTCTCCGGGCACTACCACAGGAATGCCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR CAA 90 bp | AGTACATCTGACCTGAAGGCTGCTGGGAGAAGACTGGCTCACGGGCAACTAGGAGATGGCCTCAACAGCTaGCTCCGTGAGACGGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: STSDLKAAGRRLAHGQLGDGLNS*LRETDL Trigger: GAGATCCGTCTCACGGAGCAAGCTGTTGAGGCCATC...TCCTAGTTGCCCGTGAGCCAGTCTTCTCCCAGCAGCCTTCAGGTCAGATGTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
||
| CDS TCA 90 bp | TCAGCTCATCTAAACTGTAGTAACGATGAACAATCTTCTCCGCAGTaGTGGCCACCACACGGAGCCCGTGGGTGTCTTTGCCCAGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SAHLNCSNDEQSSPQ*WPPHGARGCLCPAG Trigger: GCCAGCTGGGCAAAGACACCCACGGGCTCCGTGTGGTGGCCATCACTGCGGAGAAGATTGTTCATCGTTACTACAGTTTAGATGAGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS CCA 90 bp | TACTCGCTGCAGGTCCCTGGTCTGTTCTTGCCGCCATGGAGTTCCTaGCATGGCATGAACGAGGTCACCACACAGAACAAAGAATTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: YSLQVPGLFLPPWSS*HGMNEVTTQNKEFG Trigger: CCCAAATTCTTTGTTCTGTGTGGTGACCTCGTTCATGCCATGCCAGGAACTCCATGGCGGCAAGAACAGACCAGGGACCTGCAGCGAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
||
| CDS-3UTR CAA 90 bp | GCAAATTCCACAGAGGTCAGAGCTCCCAGGGGAGGCAGAAGAGCGAATTCCATGTGCAATGTTCAGCTGTaGGTCCAGCCAGTGATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ANSTEVRAPRGGRRANSMCNVQL*VQPVIL Trigger: CAGGATCACTGGCTGGACCAACAGCTGAACATTGCA...CATGGAATTCGCTCTTCTGCCTCCCCTGGGAGCTCTGACCTCTGTGGAATTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS GCA 90 bp | ACAGTTCCCGGTGGACCAGGCCTTCATCAGTCCAAACTGAGTGTCTaGGCCTTGGACGAAGTAGAATGGACCTTTCCATTCCCGTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TVPGGPGLHQSKLSV*ALDEVEWTFPFPFL Trigger: AAGGAACGGGAATGGAAAGGTCCATTCTACTTCGTCCAAGGCGCAGACACTCAGTTTGGACTGATGAAGGCCTGGTCCACCGGGAACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073371.7 ENSMUST00000096272.11 ENSMUST00000127972.8 |
||
| CDS-3UTR CAA 90 bp | GTAGGACCCAGCAGTTTGACTGATGTGAAAGCACATCTGTTTACAAGCCCGCCTGATGGCCTCAACAGCTaGCTCCGTGAGACGGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: VGPSSLTDVKAHLFTSPPDGLNS*LRETDL Trigger: GAGATCCGTCTCACGGAGCAAGCTGTTGAGGCCATC...AGGCGGGCTTGTAAACAGATGTGCTTTCACATCAGTCAAACTGCTGGGTCCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR CAA 90 bp | AGTACATCTGACCTGAAGGCTGCTGGGAGAAGACTGGCTCACGGGCAACTAGGATTAGGGTTCAGCTTGTaGATGGCCTCAACAGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: STSDLKAAGRRLAHGQLGLGFSL*MASTAC Trigger: GCAAGCTGTTGAGGCCATCAACAAGCTGAACCCTAA...TCCTAGTTGCCCGTGAGCCAGTCTTCTCCCAGCAGCCTTCAGGTCAGATGTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
||
| CDS TCA 90 bp | AGGTCCCTGGTCTGTTCTTGCCGCCATGGAGTTCCTGGCATGGCATaGACGAGGTCACCACACAGAACAAAGAATTTGGGTTTAGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RSLVCSCRHGVPGMA*TRSPHRTKNLGLGF Trigger: GAACCCTAAACCCAAATTCTTTGTTCTGTGTGGTGACCTCGTTCATGCCATGCCAGGAACTCCATGGCGGCAAGAACAGACCAGGGACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
||
| CDS CCA 90 bp | ATACTCTGCAGGAATAGCGGGATATGCTGGAAGACAATGGCGTGCTaGCACTGTTTCTGCTCTGCAATGTTCAGCTGTTGGTCCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ILCRNSGICWKTMAC*HCFCSAMFSCWSSQ Trigger: CTGGCTGGACCAACAGCTGAACATTGCAGAGCAGAAACAGTGCCAGCACGCCATTGTCTTCCAGCATATCCCGCTATTCCTGCAGAGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
||
| CDS-3UTR CAA 90 bp | TCAGCTCGGAAACGTATGTGTTTTGAGGACAAGCACTTACTTCGTTTCCTTTGCTCGGCTGTGGGGGCATaGCCCAAGTCATGGTTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SARKRMCFEDKHLLRFLCSAVGA*PKSWLP Trigger: CGGCAACCATGACTTGGGCAATGCCCCCACAGCCGA...GCAAAGGAAACGAAGTAAGTGCTTGTCCTCAAAACACATACGTTTCCGAGCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS GCA 90 bp | TCAATACTCTGCAGGAATAGCGGGATATGCTGGAAGACAATGGCGTaGTGGCACTGTTTCTGCTCTGCAATGTTCAGCTGTTGGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SILCRNSGICWKTMA*WHCFCSAMFSCWSS Trigger: GCTGGACCAACAGCTGAACATTGCAGAGCAGAAACAGTGCCAGCACGCCATTGTCTTCCAGCATATCCCGCTATTCCTGCAGAGTATTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
||
| CDS-3UTR CAA 90 bp | TCAGCTCGGAAACGTATGTGTTTTGAGGACAAGCACTTACTTCGTTTCCTTTGCGATGGCCTCAACAGCTaGCTCCGTGAGACGGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: SARKRMCFEDKHLLRFLCDGLNS*LRETDL Trigger: GAGATCCGTCTCACGGAGCAAGCTGTTGAGGCCATC...GCAAAGGAAACGAAGTAAGTGCTTGTCCTCAAAACACATACGTTTCCGAGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR CAA 90 bp | GCAAATTCCACAGAGGTCAGAGCTCCCAGGGGAGGCAGAAGAGCGAATTCCATGCACAGAACAAAGAATTaGGGTTTAGGGTTCAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ANSTEVRAPRGGRRANSMHRTKN*GLGFSL Trigger: CAAGCTGAACCCTAAACCCAAATTCTTTGTTCTGTG...CATGGAATTCGCTCTTCTGCCTCCCCTGGGAGCTCTGACCTCTGTGGAATTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR CAA 90 bp | CTTCTGGAACAGAGTCTGCACATGTCTGAGGTGACGTTTGTCATCAGAAAGGCATGCAATGTTCAGCTGTaGGTCCAGCCAGTGATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLEQSLHMSEVTFVIRKACNVQL*VQPVIL Trigger: CAGGATCACTGGCTGGACCAACAGCTGAACATTGCA...TGCCTTTCTGATGACAAACGTCACCTCAGACATGTGCAGACTCTGTTCCAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS CCA 90 bp | CTTCATCAATACTCTGCAGGAATAGCGGGATATGCTGGAAGACAATaGCGTGCTGGCACTGTTTCTGCTCTGCAATGTTCAGCTGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LHQYSAGIAGYAGRQ*RAGTVSALQCSAVG Trigger: ACCAACAGCTGAACATTGCAGAGCAGAAACAGTGCCAGCACGCCATTGTCTTCCAGCATATCCCGCTATTCCTGCAGAGTATTGATGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
||
| CDS-3UTR CAA 90 bp | CTTCTGGAACAGAGTCTGCACATGTCTGAGGTGACGTTTGTCATCAGAAAGGCATTAGGGTTCAGCTTGTaGATGGCCTCAACAGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LLEQSLHMSEVTFVIRKALGFSL*MASTAC Trigger: GCAAGCTGTTGAGGCCATCAACAAGCTGAACCCTAA...TGCCTTTCTGATGACAAACGTCACCTCAGACATGTGCAGACTCTGTTCCAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS-3UTR CAA 90 bp | GTCTTATGGTTTCCACTGCTGAGAAGAGACACCATGACCAAGGAAACTTATAAGCTGAGTGTCTGCGCCTaGGACGAAGTAGAATGGACC | + |
|
Preference number: 5 (lower is better) Translates to: VLWFPLLRRDTMTKETYKLSVCA*DEVEWT Trigger: GGTCCATTCTACTTCGTCCAAGGCGCAGACACTCAG...CTTATAAGTTTCCTTGGTCATGGTGTCTCTTCTCAGCAGTGGAAACCATAAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
||
| CDS-3UTR CAA 90 bp | AAGGAAAGGCAGTTCTCTTTTGAAATAAGGGTAGGACCCAGCAGTTTGACTGATCTGAGTGTCTGCGCCTaGGACGAAGTAGAATGGACC | + |
|
Preference number: 5 (lower is better) Translates to: KERQFSFEIRVGPSSLTDLSVCA*DEVEWT Trigger: GGTCCATTCTACTTCGTCCAAGGCGCAGACACTCAG...ATCAGTCAAACTGCTGGGTCCTACCCTTATTTCAAAAGAGAACTGCCTTTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096272.11 |
||
| CDS-3UTR CAA 90 bp | GTCTCTGCTTTCTTACTACCGTGGAGGCCCAGAATGTGTGGCAGTTTTACACTCCACAGAACAAAGAATTaGGGTTTAGGGTTCAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VSAFLLPWRPRMCGSFTLHRTKN*GLGFSL Trigger: CAAGCTGAACCCTAAACCCAAATTCTTTGTTCTGTG...GAGTGTAAAACTGCCACACATTCTGGGCCTCCACGGTAGTAAGAAAGCAGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
||
| CDS-3UTR CAA 90 bp | TGTCTTATCAAGGAAAGGCAGTTCTCTTTTGAAATAAGGGTAGGACCCAGCAGTCACAGAACAAAGAATTaGGGTTTAGGGTTCAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CLIKERQFSFEIRVGPSSHRTKN*GLGFSL Trigger: CAAGCTGAACCCTAAACCCAAATTCTTTGTTCTGTG...ACTGCTGGGTCCTACCCTTATTTCAAAAGAGAACTGCCTTTCCTTGATAAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS GCA 72 bp | ATGGCCTCAACAGCTTGCTCCGTGAGACGGATCTCCTaGCCCCACTCGTCACCGCCAGCGTCACAGTTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: MASTACSVRRIS*PHSSPPASQFP Trigger: CGGGAACTGTGACGCTGGCGGTGACGAGTGGGGGCAGGAGATCCGTCTCACGGAGCAAGCTGTTGAGGCCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073371.7 ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
||
| CDS TCA 72 bp | CGGCTGTGGGGGCATTGCCCAAGTCATGGTTGCCGCTaGCCATCACCAGTGGGATGTCCTGGTCGACGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: RLWGHCPSHGCR*PSPVGCPGRRL Trigger: AAGCCGTCGACCAGGACATCCCACTGGTGATGGTCAGCGGCAACCATGACTTGGGCAATGCCCCCACAGCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
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| CDS TCA 72 bp | CCAGGCCTTCATCAGTCCAAACTGAGTGTCTGCGCCTaGGGAAAACGCGTCCAGGGTCCTGCCCCGGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PGLHQSKLSVCA*GKRVQGPAPGS Trigger: AGAGCCCGGGGCAGGACCCTGGACGCGTTTTCCTCAGGCGCAGACACTCAGTTTGGACTGATGAAGGCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121750.2 |
||
| CDS CCA 72 bp | GCCCCCACTCGTCACCGCCAGCGTCACAGTTCCCGGTaGACCAGGCCTTCATCAGTCCAAACTGAGTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: APTRHRQRHSSR*TRPSSVQTECL Trigger: CAGACACTCAGTTTGGACTGATGAAGGCCTGGTCCACCGGGAACTGTGACGCTGGCGGTGACGAGTGGGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000073371.7 ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
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| CDS CCA 72 bp | TTCAGTGCGGGGCACCTGGAGGCATCGTACAAGAACTaGGAGTTGAGCACCAGGAACAGGACGCCCCCGACC | + |
|
Preference number: 6 (lower is better) Translates to: FSAGHLEASYKN*ELSTRNRTPPT Trigger: GGTCGGGGGCGTCCTGTTCCTGGTGCTCAACTCCCAGTTCTTGTACGATGCCTCCAGGTGCCCCGCACTGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
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| CDS CAA 90 bp | CCCCATGTCTGGCAGAACTCCTCCACAGTCTCGGCTGTGGGGGCATaGCCCAAGTCATGGTTGCCGCTGACCATCACCAGTGGGATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PHVWQNSSTVSAVGA*PKSWLPLTITSGMS Trigger: GGACATCCCACTGGTGATGGTCAGCGGCAACCATGACTTGGGCAATGCCCCCACAGCCGAGACTGTGGAGGAGTTCTGCCAGACATGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
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| CDS CCA 72 bp | TCCACAGTCTCGGCTGTGGGGGCATTGCCCAAGTCATaGTTGCCGCTGACCATCACCAGTGGGATGTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: STVSAVGALPKS*LPLTITSGMSW Trigger: CCAGGACATCCCACTGGTGATGGTCAGCGGCAACCATGACTTGGGCAATGCCCCCACAGCCGAGACTGTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
||
| CDS CCA 72 bp | ATCTTCTCCGCAGTGATGGCCACCACACGGAGCCCGTaGGTGTCTTTGCCCAGCTGGCACCCGATAGCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: IFSAVMATTRSP*VSLPSWHPIAD Trigger: ATCTGCTATCGGGTGCCAGCTGGGCAAAGACACCCACGGGCTCCGTGTGGTGGCCATCACTGCGGAGAAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS CAA 72 bp | ACAGTCTCGGCTGTGGGGGCATTGCCCAAGTCATGGTaGCCGCTGACCATCACCAGTGGGATGTCCTGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: TVSAVGALPKSW*PLTITSGMSWS Trigger: CGACCAGGACATCCCACTGGTGATGGTCAGCGGCAACCATGACTTGGGCAATGCCCCCACAGCCGAGACTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
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| CDS CAA 72 bp | GCAGTGATGGCCACCACACGGAGCCCGTGGGTGTCTTaGCCCAGCTGGCACCCGATAGCAGATGAAACTACC | + |
|
Preference number: 6 (lower is better) Translates to: AVMATTRSPWVS*PSWHPIADETT Trigger: GGTAGTTTCATCTGCTATCGGGTGCCAGCTGGGCAAAGACACCCACGGGCTCCGTGTGGTGGCCATCACTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
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| CDS CAA 90 bp | AACTCCTCCACAGTCTCGGCTGTGGGGGCATTGCCCAAGTCATGGTaGCCGCTGACCATCACCAGTGGGATGTCCTGGTCGACGGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: NSSTVSAVGALPKSW*PLTITSGMSWSTAF Trigger: GAAAGCCGTCGACCAGGACATCCCACTGGTGATGGTCAGCGGCAACCATGACTTGGGCAATGCCCCCACAGCCGAGACTGTGGAGGAGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
||
| CDS TCA 72 bp | GGGCTGTGGGCCTGCCTGAGACAGGACGGTACTAAGTaGGGGTCGGGGAGAAGGAAGAGAGTTCCAGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GLWACLRQDGTK*GSGRRKRVPEA Trigger: TGCTTCTGGAACTCTCTTCCTTCTCCCCGACCCTCACTTAGTACCGTCCTGTCTCAGGCAGGCCCACAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
||
| CDS TCA 72 bp | CAGTTCCCGGTGGACCAGGCCTTCATCAGTCCAAACTaGGTGTCTGCGCCTGAGGAAAACGCGTCCAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: QFPVDQAFISPN*VSAPEENASRV Trigger: GACCCTGGACGCGTTTTCCTCAGGCGCAGACACTCAGTTTGGACTGATGAAGGCCTGGTCCACCGGGAACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121750.2 |
||
| CDS CCA 72 bp | TCATGGTTGCCGCTGACCATCACCAGTGGGATGTCCTaGTCGACGGCTTTCAGTACTCGCTGCAGGTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SWLPLTITSGMS*STAFSTRCRSL Trigger: CAGGGACCTGCAGCGAGTACTGAAAGCCGTCGACCAGGACATCCCACTGGTGATGGTCAGCGGCAACCATGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
||
| CDS CAA 72 bp | TGGCAGAACTCCTCCACAGTCTCGGCTGTGGGGGCATaGCCCAAGTCATGGTTGCCGCTGACCATCACCAGT | + |
|
Preference number: 6 (lower is better) Translates to: WQNSSTVSAVGA*PKSWLPLTITS Trigger: ACTGGTGATGGTCAGCGGCAACCATGACTTGGGCAATGCCCCCACAGCCGAGACTGTGGAGGAGTTCTGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
||
| CDS CCA 72 bp | TACTCGCTGCAGGTCCCTGGTCTGTTCTTGCCGCCATaGAGTTCCTGGCATGGCATGAACGAGGTCACCACA | + |
|
Preference number: 6 (lower is better) Translates to: YSLQVPGLFLPP*SSWHGMNEVTT Trigger: TGTGGTGACCTCGTTCATGCCATGCCAGGAACTCCATGGCGGCAAGAACAGACCAGGGACCTGCAGCGAGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
||
| CDS CAA 72 bp | GGGTTTAGGGTTCAGCTTGTTGATGGCCTCAACAGCTaGCTCCGTGAGACGGATCTCCTGCCCCCACTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: GFRVQLVDGLNS*LRETDLLPPLV Trigger: GACGAGTGGGGGCAGGAGATCCGTCTCACGGAGCAAGCTGTTGAGGCCATCAACAAGCTGAACCCTAAACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000073371.7 ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
||
| CDS CAA 90 bp | ATCTTCTCCGCAGTGATGGCCACCACACGGAGCCCGTGGGTGTCTTaGCCCAGCTGGCACCCGATAGCAGATGAAACTACCATGTCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: IFSAVMATTRSPWVS*PSWHPIADETTMSR Trigger: TCTTGACATGGTAGTTTCATCTGCTATCGGGTGCCAGCTGGGCAAAGACACCCACGGGCTCCGTGTGGTGGCCATCACTGCGGAGAAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
||
| CDS GCA 72 bp | GGTTTAGGGTTCAGCTTGTTGATGGCCTCAACAGCTTaGTCCGTGAGACGGATCTCCTGCCCCCACTCGTCA | + |
|
Preference number: 6 (lower is better) Translates to: GLGFSLLMASTA*SVRRISCPHSS Trigger: TGACGAGTGGGGGCAGGAGATCCGTCTCACGGAGCAAGCTGTTGAGGCCATCAACAAGCTGAACCCTAAACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000073371.7 ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
||
| CDS CCA 72 bp | ATTGCCCAAGTCATGGTTGCCGCTGACCATCACCAGTaGGATGTCCTGGTCGACGGCTTTCAGTACTCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: IAQVMVAADHHQ*DVLVDGFQYSL Trigger: CAGCGAGTACTGAAAGCCGTCGACCAGGACATCCCACTGGTGATGGTCAGCGGCAACCATGACTTGGGCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
||
| CDS CAA 90 bp | AAAGAATTTGGGTTTAGGGTTCAGCTTGTTGATGGCCTCAACAGCTaGCTCCGTGAGACGGATCTCCTGCCCCCACTCGTCACCGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KEFGFRVQLVDGLNS*LRETDLLPPLVTAS Trigger: GCTGGCGGTGACGAGTGGGGGCAGGAGATCCGTCTCACGGAGCAAGCTGTTGAGGCCATCAACAAGCTGAACCCTAAACCCAAATTCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000073371.7 ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
||
| CDS CCA 72 bp | CAGGTCCCTGGTCTGTTCTTGCCGCCATGGAGTTCCTaGCATGGCATGAACGAGGTCACCACACAGAACAAA | + |
|
Preference number: 6 (lower is better) Translates to: QVPGLFLPPWSS*HGMNEVTTQNK Trigger: TTTGTTCTGTGTGGTGACCTCGTTCATGCCATGCCAGGAACTCCATGGCGGCAAGAACAGACCAGGGACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
||
| CDS CAA 90 bp | CCCGGTGGACCAGGCCTTCATCAGTCCAAACTGAGTGTCTGCGCCTaGGACGAAGTAGAATGGACCTTTCCATTCCCGTTCCTTTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PGGPGLHQSKLSVCA*DEVEWTFPFPFLFW Trigger: CCAGAAAAGGAACGGGAATGGAAAGGTCCATTCTACTTCGTCCAAGGCGCAGACACTCAGTTTGGACTGATGAAGGCCTGGTCCACCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127972.8 |
||
| CDS TCA 72 bp | TTCCCTCCCGCCTTCCCCTTTCCTCCTGGCATGGCATaGACGAGGTCACCACACAGAACAAAGAATTTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: FPPAFPFPPGMA*TRSPHRTKNLG Trigger: ACCCAAATTCTTTGTTCTGTGTGGTGACCTCGTTCATGCCATGCCAGGAGGAAAGGGGAAGGCGGGAGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
||
| CDS TCA 72 bp | GTGGGTGTCTTTGCCCAGCTGGCACCCGATAGCAGATaGAACTACCATGTCAAGATTCTGGTAGGTTCCCCC | + |
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Preference number: 6 (lower is better) Translates to: VGVFAQLAPDSR*NYHVKILVGSP Trigger: GGGGGAACCTACCAGAATCTTGACATGGTAGTTTCATCTGCTATCGGGTGCCAGCTGGGCAAAGACACCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
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| CDS GCA 72 bp | CTGGAAGACAATGGCGTGCTGGCACTGTTTCTGCTCTaGAATGTTCAGCTGTTGGTCCAGCCAGTGATCCTG | + |
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Preference number: 6 (lower is better) Translates to: LEDNGVLALFLL*NVQLLVQPVIL Trigger: CAGGATCACTGGCTGGACCAACAGCTGAACATTGCAGAGCAGAAACAGTGCCAGCACGCCATTGTCTTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
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| CDS TCA 72 bp | CTAAACTGTAGTAACGATGAACAATCTTCTCCGCAGTaGTGGCCACCACACGGAGCCCGTGGGTGTCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: LNCSNDEQSSPQ*WPPHGARGCLC Trigger: GCAAAGACACCCACGGGCTCCGTGTGGTGGCCATCACTGCGGAGAAGATTGTTCATCGTTACTACAGTTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 |
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| CDS GCA 72 bp | GGTGGACCAGGCCTTCATCAGTCCAAACTGAGTGTCTaGGCCTTGGACGAAGTAGAATGGACCTTTCCATTC | + |
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Preference number: 6 (lower is better) Translates to: GGPGLHQSKLSV*ALDEVEWTFPF Trigger: GAATGGAAAGGTCCATTCTACTTCGTCCAAGGCGCAGACACTCAGTTTGGACTGATGAAGGCCTGGTCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073371.7 ENSMUST00000096272.11 ENSMUST00000127972.8 |
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| CDS GCA 72 bp | GTCGGGGAGAAGGAAGAGAGTTCCAGAAGCATCTGCTaGTTATGTATCCAAGAACTTCCTCCTCCGGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: VGEKEESSRSIC*LCIQELPPPAP Trigger: AGGAGCCGGAGGAGGAAGTTCTTGGATACATAAGCAGCAGATGCTTCTGGAACTCTCTTCCTTCTCCCCGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
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| CDS GCA 72 bp | AGGGTCGGGGAGAAGGAAGAGAGTTCCAGAAGCATCTaGTGCTTATGTATCCAAGAACTTCCTCCTCCGGCT | + |
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Preference number: 6 (lower is better) Translates to: RVGEKEESSRSI*CLCIQELPPPA Trigger: AGCCGGAGGAGGAAGTTCTTGGATACATAAGCAGCAGATGCTTCTGGAACTCTCTTCCTTCTCCCCGACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073371.7 |
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| CDS CAA 72 bp | CCAGGCCTTCATCAGTCCAAACTGAGTGTCTGCGCCTaGGACGAAGTAGAATGGACCTTTCCATTCCCGTTC | + |
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Preference number: 6 (lower is better) Translates to: PGLHQSKLSVCA*DEVEWTFPFPF Trigger: GAACGGGAATGGAAAGGTCCATTCTACTTCGTCCAAGGCGCAGACACTCAGTTTGGACTGATGAAGGCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073371.7 ENSMUST00000096272.11 ENSMUST00000127972.8 |
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| CDS CAA 90 bp | ACGAGGTCACCACACAGAACAAAGAATTTGGGTTTAGGGTTCAGCTaGTTGATGGCCTCAACAGCTTGCTCCGTGAGACGGATCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: TRSPHRTKNLGLGFS*LMASTACSVRRISC Trigger: GCAGGAGATCCGTCTCACGGAGCAAGCTGTTGAGGCCATCAACAAGCTGAACCCTAAACCCAAATTCTTTGTTCTGTGTGGTGACCTCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073371.7 ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
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| CDS TCA 72 bp | GTCTGTTCTTGCCGCCATGGAGTTCCTGGCATGGCATaGACGAGGTCACCACACAGAACAAAGAATTTGGGT | + |
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Preference number: 6 (lower is better) Translates to: VCSCRHGVPGMA*TRSPHRTKNLG Trigger: ACCCAAATTCTTTGTTCTGTGTGGTGACCTCGTTCATGCCATGCCAGGAACTCCATGGCGGCAAGAACAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
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| CDS GCA 72 bp | TGCAGGAATAGCGGGATATGCTGGAAGACAATGGCGTaGTGGCACTGTTTCTGCTCTGCAATGTTCAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: CRNSGICWKTMA*WHCFCSAMFSC Trigger: ACAGCTGAACATTGCAGAGCAGAAACAGTGCCAGCACGCCATTGTCTTCCAGCATATCCCGCTATTCCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
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| CDS CCA 72 bp | AGGAATAGCGGGATATGCTGGAAGACAATGGCGTGCTaGCACTGTTTCTGCTCTGCAATGTTCAGCTGTTGG | + |
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Preference number: 6 (lower is better) Translates to: RNSGICWKTMAC*HCFCSAMFSCW Trigger: CCAACAGCTGAACATTGCAGAGCAGAAACAGTGCCAGCACGCCATTGTCTTCCAGCATATCCCGCTATTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
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| CDS CCA 72 bp | TCCAAACTGAGTGTCTGCGCCTTGGACGAAGTAGAATaGACCTTTCCATTCCCGTTCCTTTTCTGGAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: SKLSVCALDEVE*TFPFPFLFWKG Trigger: CCCCTTCCAGAAAAGGAACGGGAATGGAAAGGTCCATTCTACTTCGTCCAAGGCGCAGACACTCAGTTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127972.8 |
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| CDS CCA 72 bp | TACTCTGCAGGAATAGCGGGATATGCTGGAAGACAATaGCGTGCTGGCACTGTTTCTGCTCTGCAATGTTCA | + |
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Preference number: 6 (lower is better) Translates to: YSAGIAGYAGRQ*RAGTVSALQCS Trigger: TGAACATTGCAGAGCAGAAACAGTGCCAGCACGCCATTGTCTTCCAGCATATCCCGCTATTCCTGCAGAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096272.11 ENSMUST00000121750.2 ENSMUST00000127972.8 |
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| CDS GCA 72 bp | TCCATTCCCGTTCCTTTTCTGGAAGGGGCTCCTGGCTaGCCCAAAGTTGTTGATTTCCATATAGACATTTTT | + |
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Preference number: 6 (lower is better) Translates to: SIPVPFLEGAPG*PKVVDFHIDIF Trigger: AAAAATGTCTATATGGAAATCAACAACTTTGGGGCAGCCAGGAGCCCCTTCCAGAAAAGGAACGGGAATGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127972.8 |
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