Pregenerated sensors for CPNE9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030270Ensembl transcript IDs: ENSMUST00000041203.6, ENSMUST00000130191.8
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCTTTCCTGGCACACCCGTAAGAGGTCGCTCCACACGGCTGCCCTaGCCTCCAATCACCTCTCCCAGGGCCAGGAATGCTTGTCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: FFPGTPVRGRSTRLP*PPITSPRARNACPR Trigger: CCTGGGACAAGCATTCCTGGCCCTGGGAGAGGTGATTGGAGGCCAGGGCAGCCGTGTGGAGCGACCTCTTACGGGTGTGCCAGGAAAGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR GCA 90 bp | GGTTGGGGCTCGCAGGGGGAGGAGGTCGAGGCTGGATGTCCCTGGTaGGCATATAGGAGAGCAACTGTTCAGGAATCTCAGCTAGTACAT | + |
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Preference number: 1 (lower is better) Translates to: GWGSQGEEVEAGCPW*AYRRATVQESQLVH Trigger: ATGTACTAGCTGAGATTCCTGAACAGTTGCTCTCCTATATGCGCACCAGGGACATCCAGCCTCGACCTCCTCCCCCTGCGAGCCCCAACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR GCA 90 bp | CACACGGCTGCCCTGGCCTCCAATCACCTCTCCCAGGGCCAGGAATaGTTGTCCCAGGAAATCCTTCGGTTTGGAGATATTGGCTTTAGA | + |
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Preference number: 1 (lower is better) Translates to: HTAALASNHLSQGQE*LSQEILRFGDIGFR Trigger: TCTAAAGCCAATATCTCCAAACCGAAGGATTTCCTGGGACAAGCATTCCTGGCCCTGGGAGAGGTGATTGGAGGCCAGGGCAGCCGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR CCA 90 bp | GCAAAAAGCTTGTCAGCCAGCACTGATCAACCTAGATGGCCCTCCTaGTCAGGTTCAGAGCTCCAGGTGCCTTTAACTTCCAGCAGTGGG | + |
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Preference number: 1 (lower is better) Translates to: AKSLSASTDQPRWPS*SGSELQVPLTSSSG Trigger: CCCACTGCTGGAAGTTAAAGGCACCTGGAGCTCTGAACCTGACCAGGAGGGCCATCTAGGTTGATCAGTGCTGGCTGACAAGCTTTTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041203.6 ENSMUST00000130191.8 |
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| 3UTR CCA 90 bp | AGTCAGGGGGCAAAAAGCTTGTCAGCCAGCACTGATCAACCTAGATaGCCCTCCTGGTCAGGTTCAGAGCTCCAGGTGCCTTTAACTTCC | + |
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Preference number: 1 (lower is better) Translates to: SQGAKSLSASTDQPR*PSWSGSELQVPLTS Trigger: GGAAGTTAAAGGCACCTGGAGCTCTGAACCTGACCAGGAGGGCCATCTAGGTTGATCAGTGCTGGCTGACAAGCTTTTTGCCCCCTGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041203.6 ENSMUST00000130191.8 |
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| 3UTR GCA 90 bp | ATATACGTCGATCTTCACTGTTCTGTCATAGTCTCCGTTGCACAGTaGCCGCACAGGGATGCTGAAGGGCTGCCATACTGGGTTCAGTGT | + |
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Preference number: 1 (lower is better) Translates to: IYVDLHCSVIVSVAQ*PHRDAEGLPYWVQC Trigger: ACACTGAACCCAGTATGGCAGCCCTTCAGCATCCCTGTGCGGGCACTGTGCAACGGAGACTATGACAGAACAGTGAAGATCGACGTATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR GCA 90 bp | GCACTGTGCGCAGACTCTGGAAGTAACTCTCTAGCACACCCTCAATaGCTGCACAGTTGGGGTCTTCATCGTTATTGTTCAGGGGGAACT | + |
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Preference number: 1 (lower is better) Translates to: ALCADSGSNSLAHPQ*LHSWGLHRYCSGGT Trigger: AGTTCCCCCTGAACAATAACGATGAAGACCCCAACTGTGCAGGCATTGAGGGTGTGCTAGAGAGTTACTTCCAGAGTCTGCGCACAGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR TCA 90 bp | GATGTTAACCTCACTGAAGTTATCATTACTCCCTCACTCTTGATGTaGCCCCAGGCTCTGGGTCCCTCAGTCTCCCTCTCCAACACCCAT | + |
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Preference number: 1 (lower is better) Translates to: DVNLTEVIITPSLLM*PQALGPSVSLSNTH Trigger: ATGGGTGTTGGAGAGGGAGACTGAGGGACCCAGAGCCTGGGGTCACATCAAGAGTGAGGGAGTAATGATAACTTCAGTGAGGTTAACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
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| 3UTR TCA 90 bp | GGATGGATGTTAACCTCACTGAAGTTATCATTACTCCCTCACTCTTaGTGTGACCCCAGGCTCTGGGTCCCTCAGTCTCCCTCTCCAACA | + |
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Preference number: 1 (lower is better) Translates to: GWMLTSLKLSLLPHS*CDPRLWVPQSPSPT Trigger: TGTTGGAGAGGGAGACTGAGGGACCCAGAGCCTGGGGTCACATCAAGAGTGAGGGAGTAATGATAACTTCAGTGAGGTTAACATCCATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
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| 3UTR TCA 90 bp | TATTGTTGTCATGAGGCGGTAGGTGGTGATCATGCCAAGCCTTTCTaGAGTCAGGGGGCAAAAAGCTTGTCAGCCAGCACTGATCAACCT | + |
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Preference number: 1 (lower is better) Translates to: YCCHEAVGGDHAKPF*SQGAKSLSASTDQP Trigger: AGGTTGATCAGTGCTGGCTGACAAGCTTTTTGCCCCCTGACTTCAGAAAGGCTTGGCATGATCACCACCTACCGCCTCATGACAACAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041203.6 ENSMUST00000130191.8 |
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| 3UTR TCA 90 bp | TACACAGTAGCTGTACACCTGAACCTTCATGTGGTTGTTGGAAATTaGATTTTAGGACCTCTGCTCGCTCTGATCAACCCTGCTTGCTCA | + |
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Preference number: 1 (lower is better) Translates to: YTVAVHLNLHVVVGN*ILGPLLALINPACS Trigger: TGAGCAAGCAGGGTTGATCAGAGCGAGCAGAGGTCCTAAAATTCAATTTCCAACAACCACATGAAGGTTCAGGTGTACAGCTACTGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
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| 3UTR GCA 90 bp | AGCGGAGATTTTGCTTTTCCTCAAAGAAATAGTCGAGAACGAATTTaGGCACGAAGTCTGGATTCAGTGTGTTGTCAATCACCTCGGTTC | + |
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Preference number: 1 (lower is better) Translates to: SGDFAFPQRNSRERI*ARSLDSVCCQSPRF Trigger: GAACCGAGGTGATTGACAACACACTGAATCCAGACTTCGTGCGCAAATTCGTTCTCGACTATTTCTTTGAGGAAAAGCAAAATCTCCGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR-3UTR TCA 90 bp | AGGAGGTCGAGGCTGGATGTCCCTGGTGCGCATATAGGAGAGCAACTGTTCAGGTCTCTCCCACTGCCTTaGGGGCCATGGCATAGGCGC | + |
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Preference number: 2 (lower is better) Translates to: RRSRLDVPGAHIGEQLFRSLPLP*GPWHRR Trigger: GCGCCTATGCCATGGCCCTCAAGGCAGTGGGAGAGA...CCTGAACAGTTGCTCTCCTATATGCGCACCAGGGACATCCAGCCTCGACCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR-3UTR CCA 90 bp | CAGACTGCTAAGCATTGGCTATGTGAAGTCCTCAGGGCTGTTCTGGGGCTGGGGTCCACACGGCTGCCCTaGCCTCCAATCACCTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: QTAKHWLCEVLRAVLGLGSTRLP*PPITSP Trigger: GGGAGAGGTGATTGGAGGCCAGGGCAGCCGTGTGGA...CCCCAGCCCCAGAACAGCCCTGAGGACTTCACATAGCCAATGCTTAGCAGTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGGGGAGGAGGTCGAGGCTGGATGTCCCTGGTGCGCATATAGGAGAGCAACTGGGATGCTGAAGGGCTaGCATACTGGGTTCAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: QGEEVEAGCPWCAYRRATGMLKG*HTGFSV Trigger: CACACTGAACCCAGTATGGCAGCCCTTCAGCATCCC...AGTTGCTCTCCTATATGCGCACCAGGGACATCCAGCCTCGACCTCCTCCCCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCCAAGCCTTTCTGAAGTCAGGGGGCAAAAAGCTTGTCAGCCAGCACTGATCCCCGCCACTCCTGGCTaGCCCGGCTCTGCGTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: MPSLSEVRGQKACQPALIPATPG*PGSACE Trigger: TTCACACGCAGAGCCGGGCCAGCCAGGAGTGGCGGG...GATCAGTGCTGGCTGACAAGCTTTTTGCCCCCTGACTTCAGAAAGGCTTGGCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR-3UTR TCA 90 bp | GATAATGAGCAGAACGTAGTACTGGGAACCATCCGAGATTTTGGCTGCAGCCCTGCCCGGCTCTGCGTGTaGAGCACCACCATGGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: DNEQNVVLGTIRDFGCSPARLCV*STTMGS Trigger: GGACCCCATGGTGGTGCTTCACACGCAGAGCCGGGC...AGGGCTGCAGCCAAAATCTCGGATGGTTCCCAGTACTACGTTCTGCTCATTATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCAATGCCTGCACAGTTGGGGTCTTCATCGTTATTGTTCAGGGGGAACTGGTCCCGCACAGGGATGCTaGAGGGCTGCCATACTGGGT | + |
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Preference number: 2 (lower is better) Translates to: PQCLHSWGLHRYCSGGTGPAQGC*RAAILG Trigger: ACCCAGTATGGCAGCCCTTCAGCATCCCTGTGCGGG...ACCAGTTCCCCCTGAACAATAACGATGAAGACCCCAACTGTGCAGGCATTGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR-3UTR GCA 90 bp | GCCCATAGAGCTGCACTGTGCGCAGACTCTGGAAGTAACTCTCTAGCACACCCTGTCTCCGTTGCACAGTaGCCGCACAGGGATGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: AHRAALCADSGSNSLAHPVSVAQ*PHRDAE Trigger: TTCAGCATCCCTGTGCGGGCACTGTGCAACGGAGAC...AGGGTGTGCTAGAGAGTTACTTCCAGAGTCTGCGCACAGTGCAGCTCTATGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGGACCTTTGGAAGGGCAGTCAGTTCTCTTAGCCACTGAGCCATCTCACCAGTGTGACCCCAGGCTCTaGGTCCCTCAGTCTCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: SGPLEGQSVLLATEPSHQCDPRL*VPQSPS Trigger: AGAGGGAGACTGAGGGACCCAGAGCCTGGGGTCACA...CTGGTGAGATGGCTCAGTGGCTAAGAGAACTGACTGCCCTTCCAAAGGTCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
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| 3UTR CAA 90 bp | ACGGCTGCCCTGGCCTCCAATCACCTCTCCCAGGGCCAGGAATGCTaGTCCCAGGAAATCCTTCGGTTTGGAGATATTGGCTTTAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: TAALASNHLSQGQEC*SQEILRFGDIGFRV Trigger: GACTCTAAAGCCAATATCTCCAAACCGAAGGATTTCCTGGGACAAGCATTCCTGGCCCTGGGAGAGGTGATTGGAGGCCAGGGCAGCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTCAAACATGGCAGGTCCGACCCCGACAATAATGATAGACATGGGCAGTGAGCCATGGCATAGGCGCTaGGCTGGTAGGGACTCATGT | + |
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Preference number: 2 (lower is better) Translates to: ASNMAGPTPTIMIDMGSEPWHRR*AGRDSC Trigger: ACATGAGTCCCTACCAGCTCAGCGCCTATGCCATGG...CTCACTGCCCATGTCTATCATTATTGTCGGGGTCGGACCTGCCATGTTTGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR-3UTR GCA 90 bp | ATTGCCTCAAACATGGCAGGTCCGACCCCGACAATAATGATAGACATGGGCAGTGTCGCTCCACACGGCTaGCCTGGCCTCCAATCACCT | + |
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Preference number: 2 (lower is better) Translates to: IASNMAGPTPTIMIDMGSVAPHG*PGLQSP Trigger: AGGTGATTGGAGGCCAGGGCAGCCGTGTGGAGCGAC...ACTGCCCATGTCTATCATTATTGTCGGGGTCGGACCTGCCATGTTTGAGGCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR-3UTR GCA 90 bp | CAGACTGCTAAGCATTGGCTATGTGAAGTCCTCAGGGCTGTTCTGGGGCTGGGGGATGATCTCTCCCACTaGCTTGAGGGCCATGGCATA | + |
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Preference number: 2 (lower is better) Translates to: QTAKHWLCEVLRAVLGLGDDLSH*LEGHGI Trigger: TATGCCATGGCCCTCAAGGCAGTGGGAGAGATCATC...CCCCAGCCCCAGAACAGCCCTGAGGACTTCACATAGCCAATGCTTAGCAGTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAAAGGAGCGTCACGGTCCCCGAGTTGGTATATTTCTTCTTCTTGCATTTCTAACTCCCGCCACTCCTaGCTGGCCCGGCTCTGCGTG | + |
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Preference number: 2 (lower is better) Translates to: RKGASRSPSWYISSSCISNSRHS*LARLCV Trigger: CACGCAGAGCCGGGCCAGCCAGGAGTGGCGGGAGTT...AGAAATGCAAGAAGAAGAAATATACCAACTCGGGGACCGTGACGCTCCTTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAGGTCGAGGCTGGATGTCCCTGGTGCGCATATAGGAGAGCAACTGTTCAGGCAGGTGCAAAGTAAGTaGGCCCATAGAGCTGCACTG | + |
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Preference number: 2 (lower is better) Translates to: RRSRLDVPGAHIGEQLFRQVQSK*AHRAAL Trigger: CAGTGCAGCTCTATGGGCCCACTTACTTTGCACCTG...CCTGAACAGTTGCTCTCCTATATGCGCACCAGGGACATCCAGCCTCGACCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTCAAACATGGCAGGTCCGACCCCGACAATAATGATAGACATGGGCAGTGAGGCAGCCCTGGCCACCTaGTTGATGACAGGTGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: ASNMAGPTPTIMIDMGSEAALAT*LMTGAK Trigger: CTTTGCACCTGTCATCAACCAGGTGGCCAGGGCTGC...CTCACTGCCCATGTCTATCATTATTGTCGGGGTCGGACCTGCCATGTTTGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR-3UTR GCA 90 bp | GCACCTGGTTCCCCGATCGGTCAACATAATCTCGGAATGGGACAAACTGAACGAACTGATTCTGGGCCTTaGTCAGCTCCCGGTAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: APGSPIGQHNLGMGQTERTDSGP*SAPGSW Trigger: CCAGCTACCGGGAGCTGAGCAAGGCCCAGAATCAGT...TCGTTCAGTTTGTCCCATTCCGAGATTATGTTGACCGATCGGGGAACCAGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR-3UTR GCA 90 bp | CAGACTGCTAAGCATTGGCTATGTGAAGTCCTCAGGGCTGTTCTGGGGCTGGGGCATAGAGCTGCACTGTaGGCAGACTCTGGAAGTAAC | + |
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Preference number: 2 (lower is better) Translates to: QTAKHWLCEVLRAVLGLGHRAAL*ADSGSN Trigger: GTTACTTCCAGAGTCTGCGCACAGTGCAGCTCTATG...CCCCAGCCCCAGAACAGCCCTGAGGACTTCACATAGCCAATGCTTAGCAGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAAAGCTTGTCAGCCAGCACTGATCAACCTAGATGGCCCTCCTGGTCAGGTTAACGATGTCCCGCTCTaGATAGCGTCCCCTGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: QKACQPALINLDGPPGQVNDVPL*IASPGG Trigger: TCCTCCAGGGGACGCTATGCAGAGCGGGACATCGTT...AACCTGACCAGGAGGGCCATCTAGGTTGATCAGTGCTGGCTGACAAGCTTTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR-3UTR CCA 90 bp | CAGACTGCTAAGCATTGGCTATGTGAAGTCCTCAGGGCTGTTCTGGGGCTGGGGACTGATCAACCTAGATaGCCCTCCTGGTCAGGTTCA | + |
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Preference number: 2 (lower is better) Translates to: QTAKHWLCEVLRAVLGLGTDQPR*PSWSGS Trigger: TGAACCTGACCAGGAGGGCCATCTAGGTTGATCAGT...CCCCAGCCCCAGAACAGCCCTGAGGACTTCACATAGCCAATGCTTAGCAGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTCAAACATGGCAGGTCCGACCCCGACAATAATGATAGACATGGGCAGTGAGCACACAGCTGCATGGTaGCAATGTCCCTGCAGTTGC | + |
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Preference number: 2 (lower is better) Translates to: ASNMAGPTPTIMIDMGSEHTAAW*QCPCSC Trigger: GCAACTGCAGGGACATTGCCACCATGCAGCTGTGTG...CTCACTGCCCATGTCTATCATTATTGTCGGGGTCGGACCTGCCATGTTTGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR-3UTR CCA 90 bp | CAGACTGCTAAGCATTGGCTATGTGAAGTCCTCAGGGCTGTTCTGGGGCTGGGGACAACCTCTGTCTTGTaGCAGATGGTGAACGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: QTAKHWLCEVLRAVLGLGTTSVL*QMVNVP Trigger: TGGCACGTTCACCATCTGCCACAAGACAGAGGTTGT...CCCCAGCCCCAGAACAGCCCTGAGGACTTCACATAGCCAATGCTTAGCAGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGGGGAGGAGGTCGAGGCTGGATGTCCCTGGTGCGCATATAGGAGAGCAACTCACAAAAGTGAATTCTaGGTCCACAGAGAAGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: QGEEVEAGCPWCAYRRATHKSEF*VHREGK Trigger: CTTTCCTTCTCTGTGGACTCAGAATTCACTTTTGTG...AGTTGCTCTCCTATATGCGCACCAGGGACATCCAGCCTCGACCTCCTCCCCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR-3UTR GCA 90 bp | GCCCATAGAGCTGCACTGTGCGCAGACTCTGGAAGTAACTCTCTAGCACACCCTTTGTTTGCACACAGCTaGATGGTGGCAATGTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: AHRAALCADSGSNSLAHPLFAHS*MVAMSL Trigger: CAGGGACATTGCCACCATGCAGCTGTGTGCAAACAA...AGGGTGTGCTAGAGAGTTACTTCCAGAGTCTGCGCACAGTGCAGCTCTATGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR CAA 90 bp | ACCTCTCCCAGGGCCAGGAATGCTTGTCCCAGGAAATCCTTCGGTTaGGAGATATTGGCTTTAGAGTCGACGTTGTACACATCGAAGCGG | + |
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Preference number: 2 (lower is better) Translates to: TSPRARNACPRKSFG*EILALESTLYTSKR Trigger: CCGCTTCGATGTGTACAACGTCGACTCTAAAGCCAATATCTCCAAACCGAAGGATTTCCTGGGACAAGCATTCCTGGCCCTGGGAGAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR-3UTR TCA 90 bp | GCACCTGGTTCCCCGATCGGTCAACATAATCTCGGAATGGGACAAACTGAACGATCGTACACTGTGAACTaGTTCTGGGCCTTGCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: APGSPIGQHNLGMGQTERSYTVN*FWALLS Trigger: GCTGAGCAAGGCCCAGAATCAGTTCACAGTGTACGA...TCGTTCAGTTTGTCCCATTCCGAGATTATGTTGACCGATCGGGGAACCAGGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCAATGCCTGCACAGTTGGGGTCTTCATCGTTATTGTTCAGGGGGAACTGGTTCCCAGGGCCAGGAATaGTTGTCCCAGGAAATCCTT | + |
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Preference number: 2 (lower is better) Translates to: PQCLHSWGLHRYCSGGTGSQGQE*LSQEIL Trigger: AAGGATTTCCTGGGACAAGCATTCCTGGCCCTGGGA...ACCAGTTCCCCCTGAACAATAACGATGAAGACCCCAACTGTGCAGGCATTGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR-3UTR GCA 90 bp | AGGAGGTCGAGGCTGGATGTCCCTGGTGCGCATATAGGAGAGCAACTGTTCAGGACGTGCCATCTTCATTaGTCCTGTAGAACACAAGGA | + |
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Preference number: 2 (lower is better) Translates to: RRSRLDVPGAHIGEQLFRTCHLH*SCRTQG Trigger: TCCTTGTGTTCTACAGGAGCAATGAAGATGGCACGT...CCTGAACAGTTGCTCTCCTATATGCGCACCAGGGACATCCAGCCTCGACCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAAAGCTTGTCAGCCAGCACTGATCAACCTAGATGGCCCTCCTGGTCAGGTTCTAGCACACCCTCAATaGCTGCACAGTTGGGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: QKACQPALINLDGPPGQVLAHPQ*LHSWGL Trigger: AAGACCCCAACTGTGCAGGCATTGAGGGTGTGCTAG...AACCTGACCAGGAGGGCCATCTAGGTTGATCAGTGCTGGCTGACAAGCTTTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR-3UTR CCA 90 bp | GATAATGAGCAGAACGTAGTACTGGGAACCATCCGAGATTTTGGCTGCAGCCCTTCGCCAATGAAGTCGTaGCTTCCATCTCGGTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: DNEQNVVLGTIRDFGCSPSPMKS*LPSRSQ Trigger: CTGGGACCGAGATGGAAGCCACGACTTCATTGGCGA...AGGGCTGCAGCCAAAATCTCGGATGGTTCCCAGTACTACGTTCTGCTCATTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR-3UTR TCA 90 bp | GATAATGAGCAGAACGTAGTACTGGGAACCATCCGAGATTTTGGCTGCAGCCCTGTACCTCGTACACTGTaGACTGATTCTGGGCCTTGC | + |
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Preference number: 2 (lower is better) Translates to: DNEQNVVLGTIRDFGCSPVPRTL*TDSGPC Trigger: GCAAGGCCCAGAATCAGTTCACAGTGTACGAGGTAC...AGGGCTGCAGCCAAAATCTCGGATGGTTCCCAGTACTACGTTCTGCTCATTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR-3UTR TCA 90 bp | TGTAGCTGTCTTCAGACACACAAGAAGAGGGTATCAAATCTCATTAATGGTGGTCCCTCACTCTTGATGTaGCCCCAGGCTCTGGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: CSCLQTHKKRVSNLINGGPSLLM*PQALGP Trigger: GGGACCCAGAGCCTGGGGTCACATCAAGAGTGAGGG...ACCACCATTAATGAGATTTGATACCCTCTTCTTGTGTGTCTGAAGACAGCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
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| 3UTR-3UTR CCA 90 bp | AGTAAGTGGGCCCATAGAGCTGCACTGTGCGCAGACTCTGGAAGTAACTCTCTATCACGGTCCCCGAGTTaGTATATTTCTTCTTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: SKWAHRAALCADSGSNSLSRSPS*YISSSC Trigger: GCAAGAAGAAGAAATATACCAACTCGGGGACCGTGA...TAGAGAGTTACTTCCAGAGTCTGCGCACAGTGCAGCTCTATGGGCCCACTTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTTAGCCACTGAGCCATCTCACCAGCCCACACGTTTTCTTACAATATTTGAAACTGATCAACCTAGATaGCCCTCCTGGTCAGGTTCA | + |
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Preference number: 2 (lower is better) Translates to: LLATEPSHQPTRFLTIFETDQPR*PSWSGS Trigger: TGAACCTGACCAGGAGGGCCATCTAGGTTGATCAGT...TTCAAATATTGTAAGAAAACGTGTGGGCTGGTGAGATGGCTCAGTGGCTAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
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| 3UTR-3UTR TCA 90 bp | ATGAGTGCATTAGGATGGATGTTAACCTCACTGAAGTTATCATTACTCCCTCACCCTCTCCAACACCCATaGGACAGAGACTGCGTAAGA | + |
|
Preference number: 2 (lower is better) Translates to: MSALGWMLTSLKLSLLPHPLQHP*DRDCVR Trigger: TCTTACGCAGTCTCTGTCTCATGGGTGTTGGAGAGG...GTGAGGGAGTAATGATAACTTCAGTGAGGTTAACATCCATCCTAATGCACTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| 3UTR-3UTR CCA 90 bp | CAAAAAGCTTGTCAGCCAGCACTGATCAACCTAGATGGCCCTCCTGGTCAGGTTCCTTCATGTGGTTGTTaGAAATTGAATTTTAGGACC | + |
|
Preference number: 2 (lower is better) Translates to: QKACQPALINLDGPPGQVPSCGC*KLNFRT Trigger: GGTCCTAAAATTCAATTTCCAACAACCACATGAAGG...AACCTGACCAGGAGGGCCATCTAGGTTGATCAGTGCTGGCTGACAAGCTTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| 3UTR CAA 90 bp | TGGAAATTGAATTTTAGGACCTCTGCTCGCTCTGATCAACCCTGCTaGCTCAGATCTTGCTTGCTCCGGCCCAAAAATTTATTTATTATT | + |
|
Preference number: 2 (lower is better) Translates to: WKLNFRTSARSDQPC*LRSCLLRPKNLFII Trigger: AATAATAAATAAATTTTTGGGCCGGAGCAAGCAAGATCTGAGCAAGCAGGGTTGATCAGAGCGAGCAGAGGTCCTAAAATTCAATTTCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| 3UTR-3UTR CCA 90 bp | CTCTTAGCCACTGAGCCATCTCACCAGCCCACACGTTTTCTTACAATATTTGAATTATATAGAAGTGACTaGATGAGTGCATTAGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: LLATEPSHQPTRFLTIFELYRSD*MSALGW Trigger: CCATCCTAATGCACTCATCCAGTCACTTCTATATAA...TTCAAATATTGTAAGAAAACGTGTGGGCTGGTGAGATGGCTCAGTGGCTAAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| 3UTR CCA 72 bp | TCACCTCGGTTCGTCCGAACTCCCGCCACTCCTGGCTaGCCCGGCTCTGCGTGTGAAGCACCACCATGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SPRFVRTPATPG*PGSACEAPPWG Trigger: ACCCCATGGTGGTGCTTCACACGCAGAGCCGGGCCAGCCAGGAGTGGCGGGAGTTCGGACGAACCGAGGTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
||
| 3UTR CCA 72 bp | GGCACACCCGTAAGAGGTCGCTCCACACGGCTGCCCTaGCCTCCAATCACCTCTCCCAGGGCCAGGAATGCT | + |
|
Preference number: 3 (lower is better) Translates to: GTPVRGRSTRLP*PPITSPRARNA Trigger: AGCATTCCTGGCCCTGGGAGAGGTGATTGGAGGCCAGGGCAGCCGTGTGGAGCGACCTCTTACGGGTGTGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
||
| 3UTR CCA 72 bp | CTCGGCGGTCAGCAGTATGGTCCCACACTTCTTTCCTaGCACACCCGTAAGAGGTCGCTCCACACGGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LGGQQYGPTLLS*HTRKRSLHTAA Trigger: GGCAGCCGTGTGGAGCGACCTCTTACGGGTGTGCCAGGAAAGAAGTGTGGGACCATACTGCTGACCGCCGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
||
| 3UTR GCA 72 bp | TCGCAGGGGGAGGAGGTCGAGGCTGGATGTCCCTGGTaGGCATATAGGAGAGCAACTGTTCAGGAATCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SQGEEVEAGCPW*AYRRATVQESQ Trigger: CTGAGATTCCTGAACAGTTGCTCTCCTATATGCGCACCAGGGACATCCAGCCTCGACCTCCTCCCCCTGCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
||
| 3UTR-3UTR CAA 90 bp | CATATACGTCGATCTTCACTGTTCTGTCATAGTCTCCGTTGCACAGTGCCCGCAGCAATGTCCCTGCAGTaGCTCAGCTCCTCGGCGGTC | + |
|
Preference number: 3 (lower is better) Translates to: HIRRSSLFCHSLRCTVPAAMSLQ*LSSSAV Trigger: GACCGCCGAGGAGCTGAGCAACTGCAGGGACATTGC...TGCGGGCACTGTGCAACGGAGACTATGACAGAACAGTGAAGATCGACGTATATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
||
| 3UTR GCA 72 bp | GCCCTGGCCTCCAATCACCTCTCCCAGGGCCAGGAATaGTTGTCCCAGGAAATCCTTCGGTTTGGAGATATT | + |
|
Preference number: 3 (lower is better) Translates to: ALASNHLSQGQE*LSQEILRFGDI Trigger: AATATCTCCAAACCGAAGGATTTCCTGGGACAAGCATTCCTGGCCCTGGGAGAGGTGATTGGAGGCCAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
||
| 3UTR GCA 72 bp | CCGTTGCACAGTGCCCGCACAGGGATGCTGAAGGGCTaGCATACTGGGTTCAGTGTGTTTTTCACAACCTCT | + |
|
Preference number: 3 (lower is better) Translates to: PLHSARTGMLKG*HTGFSVFFTTS Trigger: AGAGGTTGTGAAAAACACACTGAACCCAGTATGGCAGCCCTTCAGCATCCCTGTGCGGGCACTGTGCAACGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
||
| 3UTR GCA 72 bp | GATCTTCACTGTTCTGTCATAGTCTCCGTTGCACAGTaGCCGCACAGGGATGCTGAAGGGCTGCCATACTGG | + |
|
Preference number: 3 (lower is better) Translates to: DLHCSVIVSVAQ*PHRDAEGLPYW Trigger: CCAGTATGGCAGCCCTTCAGCATCCCTGTGCGGGCACTGTGCAACGGAGACTATGACAGAACAGTGAAGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
||
| 3UTR CCA 72 bp | GCAAAAAGCTTGTCAGCCAGCACTGATCAACCTAGATaGCCCTCCTGGTCAGGTTCAGAGCTCCAGGTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: AKSLSASTDQPR*PSWSGSELQVP Trigger: AGGCACCTGGAGCTCTGAACCTGACCAGGAGGGCCATCTAGGTTGATCAGTGCTGGCTGACAAGCTTTTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041203.6 ENSMUST00000130191.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTGCCTCAAACATGGCAGGTCCGACCCCGACAATAATGATAGACATGGGCAGTGAACCATCCGAGATTTaGGCTGCAGCCCTGGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: IASNMAGPTPTIMIDMGSEPSEI*AAALAT Trigger: GGTGGCCAGGGCTGCAGCCAAAATCTCGGATGGTTC...ACTGCCCATGTCTATCATTATTGTCGGGGTCGGACCTGCCATGTTTGAGGCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
||
| 3UTR TCA 72 bp | CATGAGGCGGTAGGTGGTGATCATGCCAAGCCTTTCTaGAGTCAGGGGGCAAAAAGCTTGTCAGCCAGCACT | + |
|
Preference number: 3 (lower is better) Translates to: HEAVGGDHAKPF*SQGAKSLSAST Trigger: AGTGCTGGCTGACAAGCTTTTTGCCCCCTGACTTCAGAAAGGCTTGGCATGATCACCACCTACCGCCTCATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041203.6 ENSMUST00000130191.8 |
||
| 3UTR GCA 72 bp | CAGGTGCAAAGTAAGTGGGCCCATAGAGCTGCACTGTaGGCAGACTCTGGAAGTAACTCTCTAGCACACCCT | + |
|
Preference number: 3 (lower is better) Translates to: QVQSKWAHRAAL*ADSGSNSLAHP Trigger: AGGGTGTGCTAGAGAGTTACTTCCAGAGTCTGCGCACAGTGCAGCTCTATGGGCCCACTTACTTTGCACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
||
| 3UTR CCA 72 bp | TTGTCAGCCAGCACTGATCAACCTAGATGGCCCTCCTaGTCAGGTTCAGAGCTCCAGGTGCCTTTAACTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LSASTDQPRWPS*SGSELQVPLTS Trigger: GGAAGTTAAAGGCACCTGGAGCTCTGAACCTGACCAGGAGGGCCATCTAGGTTGATCAGTGCTGGCTGACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041203.6 ENSMUST00000130191.8 |
||
| 3UTR GCA 72 bp | ATCTCGGAATGGGACAAACTGAACGATGTCCCGCTCTaGATAGCGTCCCCTGGAGGATACACGTACATCATC | + |
|
Preference number: 3 (lower is better) Translates to: ISEWDKLNDVPL*IASPGGYTYII Trigger: GATGATGTACGTGTATCCTCCAGGGGACGCTATGCAGAGCGGGACATCGTTCAGTTTGTCCCATTCCGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
||
| 3UTR TCA 72 bp | TTAACCTCACTGAAGTTATCATTACTCCCTCACTCTTaGTGTGACCCCAGGCTCTGGGTCCCTCAGTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LTSLKLSLLPHS*CDPRLWVPQSP Trigger: GGGAGACTGAGGGACCCAGAGCCTGGGGTCACATCAAGAGTGAGGGAGTAATGATAACTTCAGTGAGGTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| 3UTR-3UTR CAA 90 bp | AGTAAGTGGGCCCATAGAGCTGCACTGTGCGCAGACTCTGGAAGTAACTCTCTATCTGGATTCAGTGTGTaGTCAATCACCTCGGTTCGT | + |
|
Preference number: 3 (lower is better) Translates to: SKWAHRAALCADSGSNSLSGFSV*SITSVR Trigger: ACGAACCGAGGTGATTGACAACACACTGAATCCAGA...TAGAGAGTTACTTCCAGAGTCTGCGCACAGTGCAGCTCTATGGGCCCACTTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
||
| 3UTR TCA 72 bp | AGGACCTTTGGAAGGGCAGTCAGTTCTCTTAGCCACTaGGCCATCTCACCAGCCCACACGTTTTCTTACAAT | + |
|
Preference number: 3 (lower is better) Translates to: RTFGRAVSSLSH*AISPAHTFSYN Trigger: ATTGTAAGAAAACGTGTGGGCTGGTGAGATGGCTCAGTGGCTAAGAGAACTGACTGCCCTTCCAAAGGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| 3UTR TCA 72 bp | ATGGTGGTTGTGAACCACAGTGTGGTTGCTGGGATTTaGACTCAGGACCTTTGGAAGGGCAGTCAGTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: MVVVNHSVVAGI*TQDLWKGSQFS Trigger: AGAGAACTGACTGCCCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACACTGTGGTTCACAACCACCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| 3UTR-3UTR CAA 90 bp | CAAAAAGCTTGTCAGCCAGCACTGATCAACCTAGATGGCCCTCCTGGTCAGGTTTTCGGTTTGGAGATATaGGCTTTAGAGTCGACGTTG | + |
|
Preference number: 3 (lower is better) Translates to: QKACQPALINLDGPPGQVFGLEI*ALESTL Trigger: CAACGTCGACTCTAAAGCCAATATCTCCAAACCGAA...AACCTGACCAGGAGGGCCATCTAGGTTGATCAGTGCTGGCTGACAAGCTTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
||
| 3UTR GCA 72 bp | GCAGACTCTGGAAGTAACTCTCTAGCACACCCTCAATaGCTGCACAGTTGGGGTCTTCATCGTTATTGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: ADSGSNSLAHPQ*LHSWGLHRYCS Trigger: TGAACAATAACGATGAAGACCCCAACTGTGCAGGCATTGAGGGTGTGCTAGAGAGTTACTTCCAGAGTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
||
| 3UTR CCA 72 bp | CTCATTAATGGTGGTTGTGAACCACAGTGTGGTTGCTaGGATTTGAACTCAGGACCTTTGGAAGGGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LINGGCEPQCGC*DLNSGPLEGQS Trigger: TGACTGCCCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACACTGTGGTTCACAACCACCATTAATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| 3UTR CCA 72 bp | ACTGGGTTCAGTGTGTTTTTCACAACCTCTGTCTTGTaGCAGATGGTGAACGTGCCATCTTCATTGCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: TGFSVFFTTSVL*QMVNVPSSLLL Trigger: CAGGAGCAATGAAGATGGCACGTTCACCATCTGCCACAAGACAGAGGTTGTGAAAAACACACTGAACCCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
||
| 3UTR TCA 72 bp | AGTCCAGATAAGTTGCCTACACTGGCCTTGAACTTGTaGTTACAGGCTTGTACCACTAGGACCTCACAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: SPDKLPTLALNL*LQACTTRTSQL Trigger: CAACTGTGAGGTCCTAGTGGTACAAGCCTGTAATCACAAGTTCAAGGCCAGTGTAGGCAACTTATCTGGACT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| 3UTR GCA 72 bp | AATCTCATTAATGGTGGTTGTGAACCACAGTGTGGTTaGTGGGATTTGAACTCAGGACCTTTGGAAGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: NLINGGCEPQCG*WDLNSGPLEGQ Trigger: CTGCCCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACACTGTGGTTCACAACCACCATTAATGAGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| 3UTR TCA 72 bp | GCTGTACACCTGAACCTTCATGTGGTTGTTGGAAATTaGATTTTAGGACCTCTGCTCGCTCTGATCAACCCT | + |
|
Preference number: 3 (lower is better) Translates to: AVHLNLHVVVGN*ILGPLLALINP Trigger: AGGGTTGATCAGAGCGAGCAGAGGTCCTAAAATTCAATTTCCAACAACCACATGAAGGTTCAGGTGTACAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| 3UTR-3UTR CAA 90 bp | GATAATGAGCAGAACGTAGTACTGGGAACCATCCGAGATTTTGGCTGCAGCCCTGTATATTTCTTCTTCTaGCATTTCTTCCGAGGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: DNEQNVVLGTIRDFGCSPVYFFF*HFFRGL Trigger: TAACCCTCGGAAGAAATGCAAGAAGAAGAAATATAC...AGGGCTGCAGCCAAAATCTCGGATGGTTCCCAGTACTACGTTCTGCTCATTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
||
| 3UTR GCA 72 bp | TCTGCTCGCTCTGATCAACCCTGCTTGCTCAGATCTTaGTTGCTCCGGCCCAAAAATTTATTTATTATTATA | + |
|
Preference number: 3 (lower is better) Translates to: SARSDQPCLLRS*LLRPKNLFIII Trigger: TATAATAATAAATAAATTTTTGGGCCGGAGCAAGCAAGATCTGAGCAAGCAGGGTTGATCAGAGCGAGCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| 3UTR GCA 72 bp | TTTGCTTTTCCTCAAAGAAATAGTCGAGAACGAATTTaGGCACGAAGTCTGGATTCAGTGTGTTGTCAATCA | + |
|
Preference number: 3 (lower is better) Translates to: FAFPQRNSRERI*ARSLDSVCCQS Trigger: TGATTGACAACACACTGAATCCAGACTTCGTGCGCAAATTCGTTCTCGACTATTTCTTTGAGGAAAAGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
||
| 3UTR GCA 72 bp | CTCGCTCTGATCAACCCTGCTTGCTCAGATCTTGCTTaGTCCGGCCCAAAAATTTATTTATTATTATATATA | + |
|
Preference number: 3 (lower is better) Translates to: LALINPACSDLA*SGPKIYLLLYI Trigger: TATATATAATAATAAATAAATTTTTGGGCCGGAGCAAGCAAGATCTGAGCAAGCAGGGTTGATCAGAGCGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR CCA 90 bp | TCAGGACCTTTGGAAGGGCAGTCAGTTCTCTTAGCCACTGAGCCATCTCACCAGCCCGCCACTCCTGGCTaGCCCGGCTCTGCGTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SGPLEGQSVLLATEPSHQPATPG*PGSACE Trigger: TTCACACGCAGAGCCGGGCCAGCCAGGAGTGGCGGG...CTGGTGAGATGGCTCAGTGGCTAAGAGAACTGACTGCCCTTCCAAAGGTCCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR CCA 90 bp | TCAGGACCTTTGGAAGGGCAGTCAGTTCTCTTAGCCACTGAGCCATCTCACCAGAACTCCCGCCACTCCTaGCTGGCCCGGCTCTGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGPLEGQSVLLATEPSHQNSRHS*LARLCV Trigger: CACGCAGAGCCGGGCCAGCCAGGAGTGGCGGGAGTT...CTGGTGAGATGGCTCAGTGGCTAAGAGAACTGACTGCCCTTCCAAAGGTCCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR TCA 90 bp | GTCAGGGGGCAAAAAGCTTGTCAGCCAGCACTGATCAACCTAGATGGCCCTCCTTCTCTCCCACTGCCTTaGGGGCCATGGCATAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VRGQKACQPALINLDGPPSLPLP*GPWHRR Trigger: GCGCCTATGCCATGGCCCTCAAGGCAGTGGGAGAGA...AGGAGGGCCATCTAGGTTGATCAGTGCTGGCTGACAAGCTTTTTGCCCCCTGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR GCA 90 bp | AGGCTCTGGGTCCCTCAGTCTCCCTCTCCAACACCCATGAGACAGAGACTGCGTGTCTCCGTTGCACAGTaGCCGCACAGGGATGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RLWVPQSPSPTPMRQRLRVSVAQ*PHRDAE Trigger: TTCAGCATCCCTGTGCGGGCACTGTGCAACGGAGAC...ACGCAGTCTCTGTCTCATGGGTGTTGGAGAGGGAGACTGAGGGACCCAGAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR TCA 90 bp | ACTGATCAACCTAGATGGCCCTCCTGGTCAGGTTCAGAGCTCCAGGTGCCTTTACCCGCACAGGGATGCTaGAGGGCTGCCATACTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TDQPRWPSWSGSELQVPLPAQGC*RAAILG Trigger: ACCCAGTATGGCAGCCCTTCAGCATCCCTGTGCGGG...TAAAGGCACCTGGAGCTCTGAACCTGACCAGGAGGGCCATCTAGGTTGATCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR CCA 90 bp | AGCCTTTCTGAAGTCAGGGGGCAAAAAGCTTGTCAGCCAGCACTGATCAACCTAGGGCTGTTCTGGGGCTaGGGTTGGGTTGGGGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SLSEVRGQKACQPALINLGLFWG*GWVGAR Trigger: GCGAGCCCCAACCCAACCCCAGCCCCAGAACAGCCC...TAGGTTGATCAGTGCTGGCTGACAAGCTTTTTGCCCCCTGACTTCAGAAAGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| 3UTR CAA 72 bp | TTTGCACACAGCTGCATGGTGGCAATGTCCCTGCAGTaGCTCAGCTCCTCGGCGGTCAGCAGTATGGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FAHSCMVAMSLQ*LSSSAVSSMVP Trigger: TGGGACCATACTGCTGACCGCCGAGGAGCTGAGCAACTGCAGGGACATTGCCACCATGCAGCTGTGTGCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
||
| CDS-3UTR TCA 90 bp | CTGGATTCAGTGTGTTGTCAATCACCTCGGTTCGTCCGAACTCCCGCCACTCCTACCTTGACACAGTCCTaGACTGACTGGGCACCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LDSVCCQSPRFVRTPATPTLTQS*TDWAPA Trigger: TGCCGGTGCCCAGTCAGTTCAGGACTGTGTCAAGGT...AGGAGTGGCGGGAGTTCGGACGAACCGAGGTGATTGACAACACACTGAATCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGGGATTTGAACTCAGGACCTTTGGAAGGGCAGTCAGTTCTCTTAGCCACTGTCGCTCCACACGGCTaGCCTGGCCTCCAATCACCT | + |
|
Preference number: 4 (lower is better) Translates to: CWDLNSGPLEGQSVLLATVAPHG*PGLQSP Trigger: AGGTGATTGGAGGCCAGGGCAGCCGTGTGGAGCGAC...AGTGGCTAAGAGAACTGACTGCCCTTCCAAAGGTCCTGAGTTCAAATCCCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR GCA 90 bp | CCTTTGGAAGGGCAGTCAGTTCTCTTAGCCACTGAGCCATCTCACCAGCCCACAGGGATGCTGAAGGGCTaGCATACTGGGTTCAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLEGQSVLLATEPSHQPTGMLKG*HTGFSV Trigger: CACACTGAACCCAGTATGGCAGCCCTTCAGCATCCC...TGTGGGCTGGTGAGATGGCTCAGTGGCTAAGAGAACTGACTGCCCTTCCAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| 3UTR CAA 72 bp | CTGGCCTCCAATCACCTCTCCCAGGGCCAGGAATGCTaGTCCCAGGAAATCCTTCGGTTTGGAGATATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LASNHLSQGQEC*SQEILRFGDIG Trigger: GCCAATATCTCCAAACCGAAGGATTTCCTGGGACAAGCATTCCTGGCCCTGGGAGAGGTGATTGGAGGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
||
| CDS-3UTR TCA 90 bp | AGCCTTTCTGAAGTCAGGGGGCAAAAAGCTTGTCAGCCAGCACTGATCAACCTAGACACAGTCCTGAACTaGCTGGGCACCGGCACGACA | + |
|
Preference number: 4 (lower is better) Translates to: SLSEVRGQKACQPALINLDTVLN*LGTGTT Trigger: TGTCGTGCCGGTGCCCAGTCAGTTCAGGACTGTGTC...TAGGTTGATCAGTGCTGGCTGACAAGCTTTTTGCCCCCTGACTTCAGAAAGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
||
| CDS-3UTR GCA 90 bp | TCAGGACCTTTGGAAGGGCAGTCAGTTCTCTTAGCCACTGAGCCATCTCACCAGTGTCATAGTCTCCGTTaGACAGTGCCCGCACAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SGPLEGQSVLLATEPSHQCHSLR*TVPAQG Trigger: TCCCTGTGCGGGCACTGTGCAACGGAGACTATGACA...CTGGTGAGATGGCTCAGTGGCTAAGAGAACTGACTGCCCTTCCAAAGGTCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR CCA 90 bp | CCTTTGGAAGGGCAGTCAGTTCTCTTAGCCACTGAGCCATCTCACCAGCCCACATTGCACACAGCTGCATaGTGGCAATGTCCCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PLEGQSVLLATEPSHQPTLHTAA*WQCPCS Trigger: ACTGCAGGGACATTGCCACCATGCAGCTGTGTGCAA...TGTGGGCTGGTGAGATGGCTCAGTGGCTAAGAGAACTGACTGCCCTTCCAAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR CCA 90 bp | CAAAAAGCTTGTCAGCCAGCACTGATCAACCTAGATGGCCCTCCTGGTCAGGTTGCAGCCCTGGCCACCTaGTTGATGACAGGTGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QKACQPALINLDGPPGQVAALAT*LMTGAK Trigger: CTTTGCACCTGTCATCAACCAGGTGGCCAGGGCTGC...AACCTGACCAGGAGGGCCATCTAGGTTGATCAGTGCTGGCTGACAAGCTTTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR CCA 90 bp | TCAGGACCTTTGGAAGGGCAGTCAGTTCTCTTAGCCACTGAGCCATCTCACCAGGAGGCTGGATGTCCCTaGTGCGCATATAGGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SGPLEGQSVLLATEPSHQEAGCP*CAYRRA Trigger: TGCTCTCCTATATGCGCACCAGGGACATCCAGCCTC...CTGGTGAGATGGCTCAGTGGCTAAGAGAACTGACTGCCCTTCCAAAGGTCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR TCA 90 bp | GTCAGGGGGCAAAAAGCTTGTCAGCCAGCACTGATCAACCTAGATGGCCCTCCTTCTTGTGGCAGATGGTaGACGTGCCATCTTCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: VRGQKACQPALINLDGPPSCGRW*TCHLHC Trigger: GCAATGAAGATGGCACGTTCACCATCTGCCACAAGA...AGGAGGGCCATCTAGGTTGATCAGTGCTGGCTGACAAGCTTTTTGCCCCCTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR GCA 90 bp | ATGCCAAGCCTTTCTGAAGTCAGGGGGCAAAAAGCTTGTCAGCCAGCACTGATCATCCGAGATTTTGGCTaGAGCCCTGGCCACCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: MPSLSEVRGQKACQPALIIRDFG*SPGHLV Trigger: AACCAGGTGGCCAGGGCTGCAGCCAAAATCTCGGAT...GATCAGTGCTGGCTGACAAGCTTTTTGCCCCCTGACTTCAGAAAGGCTTGGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR CCA 90 bp | ATGCCAAGCCTTTCTGAAGTCAGGGGGCAAAAAGCTTGTCAGCCAGCACTGATCCGGCGGTCAGCAGTATaGTCCCACACTTCTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MPSLSEVRGQKACQPALIRRSAV*SHTSFL Trigger: CAGGAAAGAAGTGTGGGACCATACTGCTGACCGCCG...GATCAGTGCTGGCTGACAAGCTTTTTGCCCCCTGACTTCAGAAAGGCTTGGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR CCA 90 bp | ATGCCAAGCCTTTCTGAAGTCAGGGGGCAAAAAGCTTGTCAGCCAGCACTGATCCAGCTAGTACATCCTTaGCCAGTCGGGCCATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MPSLSEVRGQKACQPALIQLVHP*PVGPCS Trigger: TGAGCATGGCCCGACTGGCCAAGGATGTACTAGCTG...GATCAGTGCTGGCTGACAAGCTTTTTGCCCCCTGACTTCAGAAAGGCTTGGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| 3UTR CAA 72 bp | CCACAGTGTGGTTGCTGGGATTTGAACTCAGGACCTTaGGAAGGGCAGTCAGTTCTCTTAGCCACTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PQCGCWDLNSGP*EGQSVLLATEP Trigger: TGGCTCAGTGGCTAAGAGAACTGACTGCCCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACACTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR TCA 90 bp | TGTAGCTGTCTTCAGACACACAAGAAGAGGGTATCAAATCTCATTAATGGTGGTGCCCGGCTCTGCGTGTaGAGCACCACCATGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CSCLQTHKKRVSNLINGGARLCV*STTMGS Trigger: GGACCCCATGGTGGTGCTTCACACGCAGAGCCGGGC...ACCACCATTAATGAGATTTGATACCCTCTTCTTGTGTGTCTGAAGACAGCTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR TCA 90 bp | ATGCCAAGCCTTTCTGAAGTCAGGGGGCAAAAAGCTTGTCAGCCAGCACTGATCGTACCTCGTACACTGTaGACTGATTCTGGGCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: MPSLSEVRGQKACQPALIVPRTL*TDSGPC Trigger: GCAAGGCCCAGAATCAGTTCACAGTGTACGAGGTAC...GATCAGTGCTGGCTGACAAGCTTTTTGCCCCCTGACTTCAGAAAGGCTTGGCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR GCA 90 bp | ATGCCAAGCCTTTCTGAAGTCAGGGGGCAAAAAGCTTGTCAGCCAGCACTGATCCACACCCTCAATGCCTaGACAGTTGGGGTCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: MPSLSEVRGQKACQPALIHTLNA*TVGVFI Trigger: GATGAAGACCCCAACTGTGCAGGCATTGAGGGTGTG...GATCAGTGCTGGCTGACAAGCTTTTTGCCCCCTGACTTCAGAAAGGCTTGGCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR CCA 90 bp | CTCTTAGCCACTGAGCCATCTCACCAGCCCACACGTTTTCTTACAATATTTGAATCCACACGGCTGCCCTaGCCTCCAATCACCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLATEPSHQPTRFLTIFESTRLP*PPITSP Trigger: GGGAGAGGTGATTGGAGGCCAGGGCAGCCGTGTGGA...TTCAAATATTGTAAGAAAACGTGTGGGCTGGTGAGATGGCTCAGTGGCTAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR CCA 90 bp | ACTGATCAACCTAGATGGCCCTCCTGGTCAGGTTCAGAGCTCCAGGTGCCTTTACTGCATAGCGTCCCCTaGAGGATACACGTACATCAT | + |
|
Preference number: 4 (lower is better) Translates to: TDQPRWPSWSGSELQVPLLHSVP*RIHVHH Trigger: ATGATGTACGTGTATCCTCCAGGGGACGCTATGCAG...TAAAGGCACCTGGAGCTCTGAACCTGACCAGGAGGGCCATCTAGGTTGATCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR GCA 90 bp | AGCCTTTCTGAAGTCAGGGGGCAAAAAGCTTGTCAGCCAGCACTGATCAACCTATCCCAGGGCCAGGAATaGTTGTCCCAGGAAATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLSEVRGQKACQPALINLSQGQE*LSQEIL Trigger: AAGGATTTCCTGGGACAAGCATTCCTGGCCCTGGGA...TAGGTTGATCAGTGCTGGCTGACAAGCTTTTTGCCCCCTGACTTCAGAAAGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR GCA 90 bp | GACTGGATGAGTGCATTAGGATGGATGTTAACCTCACTGAAGTTATCATTACTCTGGCCAGTCGGGCCATaGTCAGCACCTGGTTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: DWMSALGWMLTSLKLSLLWPVGP*SAPGSP Trigger: CGGGGAACCAGGTGCTGAGCATGGCCCGACTGGCCA...GAGTAATGATAACTTCAGTGAGGTTAACATCCATCCTAATGCACTCATCCAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR CCA 90 bp | CCAAGCCTTTCTGAAGTCAGGGGGCAAAAAGCTTGTCAGCCAGCACTGATCAACACAACCTCTGTCTTGTaGCAGATGGTGAACGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSLSEVRGQKACQPALINTTSVL*QMVNVP Trigger: TGGCACGTTCACCATCTGCCACAAGACAGAGGTTGT...GTTGATCAGTGCTGGCTGACAAGCTTTTTGCCCCCTGACTTCAGAAAGGCTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR GCA 90 bp | TGCTGGGATTTGAACTCAGGACCTTTGGAAGGGCAGTCAGTTCTCTTAGCCACTCATAGAGCTGCACTGTaGGCAGACTCTGGAAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: CWDLNSGPLEGQSVLLATHRAAL*ADSGSN Trigger: GTTACTTCCAGAGTCTGCGCACAGTGCAGCTCTATG...AGTGGCTAAGAGAACTGACTGCCCTTCCAAAGGTCCTGAGTTCAAATCCCAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR CCA 90 bp | GCCACTGAGCCATCTCACCAGCCCACACGTTTTCTTACAATATTTGAAATTTTATTCAGGGGGAACTGGTaGGAGATCCGCCCCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ATEPSHQPTRFLTIFEILFRGNW*EIRPSG Trigger: CCCAGAGGGGCGGATCTCCCACCAGTTCCCCCTGAA...TAAAATTTCAAATATTGTAAGAAAACGTGTGGGCTGGTGAGATGGCTCAGTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| 3UTR CAA 72 bp | AATGGTGGTTGTGAACCACAGTGTGGTTGCTGGGATTaGAACTCAGGACCTTTGGAAGGGCAGTCAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NGGCEPQCGCWD*NSGPLEGQSVL Trigger: GAGAACTGACTGCCCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACACTGTGGTTCACAACCACCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR GCA 90 bp | CCAAGCCTTTCTGAAGTCAGGGGGCAAAAAGCTTGTCAGCCAGCACTGATCAACACGTGCCATCTTCATTaGTCCTGTAGAACACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSLSEVRGQKACQPALINTCHLH*SCRTQG Trigger: TCCTTGTGTTCTACAGGAGCAATGAAGATGGCACGT...GTTGATCAGTGCTGGCTGACAAGCTTTTTGCCCCCTGACTTCAGAAAGGCTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR GCA 90 bp | AGCCTTTCTGAAGTCAGGGGGCAAAAAGCTTGTCAGCCAGCACTGATCAACCTACTGGTTGATGACAGGTaGAAAGTAAGTGGGCCCATA | + |
|
Preference number: 4 (lower is better) Translates to: SLSEVRGQKACQPALINLLVDDR*KVSGPI Trigger: TATGGGCCCACTTACTTTGCACCTGTCATCAACCAG...TAGGTTGATCAGTGCTGGCTGACAAGCTTTTTGCCCCCTGACTTCAGAAAGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR CCA 90 bp | ATGCCAAGCCTTTCTGAAGTCAGGGGGCAAAAAGCTTGTCAGCCAGCACTGATCTCACGGTCCCCGAGTTaGTATATTTCTTCTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: MPSLSEVRGQKACQPALISRSPS*YISSSC Trigger: GCAAGAAGAAGAAATATACCAACTCGGGGACCGTGA...GATCAGTGCTGGCTGACAAGCTTTTTGCCCCCTGACTTCAGAAAGGCTTGGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| 3UTR CAA 72 bp | AGGGCCAGGAATGCTTGTCCCAGGAAATCCTTCGGTTaGGAGATATTGGCTTTAGAGTCGACGTTGTACACA | + |
|
Preference number: 4 (lower is better) Translates to: RARNACPRKSFG*EILALESTLYT Trigger: TGTGTACAACGTCGACTCTAAAGCCAATATCTCCAAACCGAAGGATTTCCTGGGACAAGCATTCCTGGCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
||
| CDS-3UTR TCA 90 bp | GCCACTGAGCCATCTCACCAGCCCACACGTTTTCTTACAATATTTGAAATTTTACCATGGCATAGGCGCTaGGCTGGTAGGGACTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: ATEPSHQPTRFLTIFEILPWHRR*AGRDSC Trigger: ACATGAGTCCCTACCAGCTCAGCGCCTATGCCATGG...TAAAATTTCAAATATTGTAAGAAAACGTGTGGGCTGGTGAGATGGCTCAGTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR GCA 90 bp | GCCACTGAGCCATCTCACCAGCCCACACGTTTTCTTACAATATTTGAAATTTTAACTGATTCTGGGCCTTaGTCAGCTCCCGGTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ATEPSHQPTRFLTIFEILTDSGP*SAPGSW Trigger: CCAGCTACCGGGAGCTGAGCAAGGCCCAGAATCAGT...TAAAATTTCAAATATTGTAAGAAAACGTGTGGGCTGGTGAGATGGCTCAGTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR GCA 90 bp | TGGATGAGTGCATTAGGATGGATGTTAACCTCACTGAAGTTATCATTACTCCCTAACGATGTCCCGCTCTaGATAGCGTCCCCTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WMSALGWMLTSLKLSLLPNDVPL*IASPGG Trigger: TCCTCCAGGGGACGCTATGCAGAGCGGGACATCGTT...AGGGAGTAATGATAACTTCAGTGAGGTTAACATCCATCCTAATGCACTCATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR CCA 90 bp | TGTAGCTGTCTTCAGACACACAAGAAGAGGGTATCAAATCTCATTAATGGTGGTTTGTTCAGGGGGAACTaGTGGGAGATCCGCCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSCLQTHKKRVSNLINGGLFRGN*WEIRPS Trigger: AGAGGGGCGGATCTCCCACCAGTTCCCCCTGAACAA...ACCACCATTAATGAGATTTGATACCCTCTTCTTGTGTGTCTGAAGACAGCTACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR CCA 90 bp | GACTGGATGAGTGCATTAGGATGGATGTTAACCTCACTGAAGTTATCATTACTCCACACAGCTGCATGGTaGCAATGTCCCTGCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: DWMSALGWMLTSLKLSLLHTAAW*QCPCSC Trigger: GCAACTGCAGGGACATTGCCACCATGCAGCTGTGTG...GAGTAATGATAACTTCAGTGAGGTTAACATCCATCCTAATGCACTCATCCAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR CCA 90 bp | ATGAGTGCATTAGGATGGATGTTAACCTCACTGAAGTTATCATTACTCCCTCACTCGCCAATGAAGTCGTaGCTTCCATCTCGGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MSALGWMLTSLKLSLLPHSPMKS*LPSRSQ Trigger: CTGGGACCGAGATGGAAGCCACGACTTCATTGGCGA...GTGAGGGAGTAATGATAACTTCAGTGAGGTTAACATCCATCCTAATGCACTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR CCA 90 bp | ATGAGTGCATTAGGATGGATGTTAACCTCACTGAAGTTATCATTACTCCCTCACAACCATCCGAGATTTTaGCTGCAGCCCTGGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: MSALGWMLTSLKLSLLPHNHPRF*LQPWPP Trigger: AGGTGGCCAGGGCTGCAGCCAAAATCTCGGATGGTT...GTGAGGGAGTAATGATAACTTCAGTGAGGTTAACATCCATCCTAATGCACTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| 3UTR CAA 72 bp | AATTTTAGGACCTCTGCTCGCTCTGATCAACCCTGCTaGCTCAGATCTTGCTTGCTCCGGCCCAAAAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: NFRTSARSDQPC*LRSCLLRPKNL Trigger: TAAATTTTTGGGCCGGAGCAAGCAAGATCTGAGCAAGCAGGGTTGATCAGAGCGAGCAGAGGTCCTAAAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| 3UTR CAA 72 bp | AATGCTTGTCCCAGGAAATCCTTCGGTTTGGAGATATaGGCTTTAGAGTCGACGTTGTACACATCGAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: NACPRKSFGLEI*ALESTLYTSKR Trigger: CCGCTTCGATGTGTACAACGTCGACTCTAAAGCCAATATCTCCAAACCGAAGGATTTCCTGGGACAAGCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
||
| 3UTR CAA 72 bp | CATACTGGGTTCAGTGTGTTTTTCACAACCTCTGTCTaGTGGCAGATGGTGAACGTGCCATCTTCATTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HTGFSVFFTTSV*WQMVNVPSSLL Trigger: GAGCAATGAAGATGGCACGTTCACCATCTGCCACAAGACAGAGGTTGTGAAAAACACACTGAACCCAGTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
||
| 3UTR CAA 72 bp | AGCGTCACGGTCCCCGAGTTGGTATATTTCTTCTTCTaGCATTTCTTCCGAGGGTTAAGTACCTCGTACACT | + |
|
Preference number: 4 (lower is better) Translates to: SVTVPELVYFFF*HFFRGLSTSYT Trigger: AGTGTACGAGGTACTTAACCCTCGGAAGAAATGCAAGAAGAAGAAATATACCAACTCGGGGACCGTGACGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
||
| CDS-3UTR TCA 90 bp | TGTAGCTGTCTTCAGACACACAAGAAGAGGGTATCAAATCTCATTAATGGTGGTTCGTACACTGTGAACTaGTTCTGGGCCTTGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CSCLQTHKKRVSNLINGGSYTVN*FWALLS Trigger: GCTGAGCAAGGCCCAGAATCAGTTCACAGTGTACGA...ACCACCATTAATGAGATTTGATACCCTCTTCTTGTGTGTCTGAAGACAGCTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR GCA 90 bp | GACTGGATGAGTGCATTAGGATGGATGTTAACCTCACTGAAGTTATCATTACTCGATGATCTCTCCCACTaGCTTGAGGGCCATGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: DWMSALGWMLTSLKLSLLDDLSH*LEGHGI Trigger: TATGCCATGGCCCTCAAGGCAGTGGGAGAGATCATC...GAGTAATGATAACTTCAGTGAGGTTAACATCCATCCTAATGCACTCATCCAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR GCA 90 bp | GACTGGATGAGTGCATTAGGATGGATGTTAACCTCACTGAAGTTATCATTACTCCTAGCACACCCTCAATaGCTGCACAGTTGGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DWMSALGWMLTSLKLSLLLAHPQ*LHSWGL Trigger: AAGACCCCAACTGTGCAGGCATTGAGGGTGTGCTAG...GAGTAATGATAACTTCAGTGAGGTTAACATCCATCCTAATGCACTCATCCAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR CCA 90 bp | CTCTTAGCCACTGAGCCATCTCACCAGCCCACACGTTTTCTTACAATATTTGAAGAAGGGCTGCCATACTaGGTTCAGTGTGTTTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLATEPSHQPTRFLTIFEEGLPY*VQCVFH Trigger: GTGAAAAACACACTGAACCCAGTATGGCAGCCCTTC...TTCAAATATTGTAAGAAAACGTGTGGGCTGGTGAGATGGCTCAGTGGCTAAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR CCA 90 bp | TGGATGAGTGCATTAGGATGGATGTTAACCTCACTGAAGTTATCATTACTCCCTCAGGTGCAAAGTAAGTaGGCCCATAGAGCTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: WMSALGWMLTSLKLSLLPQVQSK*AHRAAL Trigger: CAGTGCAGCTCTATGGGCCCACTTACTTTGCACCTG...AGGGAGTAATGATAACTTCAGTGAGGTTAACATCCATCCTAATGCACTCATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR GCA 90 bp | TGGATGAGTGCATTAGGATGGATGTTAACCTCACTGAAGTTATCATTACTCCCTTTGTTTGCACACAGCTaGATGGTGGCAATGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: WMSALGWMLTSLKLSLLPLFAHS*MVAMSL Trigger: CAGGGACATTGCCACCATGCAGCTGTGTGCAAACAA...AGGGAGTAATGATAACTTCAGTGAGGTTAACATCCATCCTAATGCACTCATCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR GCA 90 bp | TGTAGCTGTCTTCAGACACACAAGAAGAGGGTATCAAATCTCATTAATGGTGGTATCCAGCTCTTCCATTaGCTCAAACATGGCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CSCLQTHKKRVSNLINGGIQLFH*LKHGRS Trigger: GGACCTGCCATGTTTGAGGCAATGGAAGAGCTGGAT...ACCACCATTAATGAGATTTGATACCCTCTTCTTGTGTGTCTGAAGACAGCTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR TCA 90 bp | ATGAGTGCATTAGGATGGATGTTAACCTCACTGAAGTTATCATTACTCCCTCACCACAAAAGTGAATTCTaGGTCCACAGAGAAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: MSALGWMLTSLKLSLLPHHKSEF*VHREGK Trigger: CTTTCCTTCTCTGTGGACTCAGAATTCACTTTTGTG...GTGAGGGAGTAATGATAACTTCAGTGAGGTTAACATCCATCCTAATGCACTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| 3UTR CAA 72 bp | GCTCGCTCTGATCAACCCTGCTTGCTCAGATCTTGCTaGCTCCGGCCCAAAAATTTATTTATTATTATATAT | + |
|
Preference number: 4 (lower is better) Translates to: ARSDQPCLLRSC*LRPKNLFIIIY Trigger: ATATATAATAATAAATAAATTTTTGGGCCGGAGCAAGCAAGATCTGAGCAAGCAGGGTTGATCAGAGCGAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR CAA 90 bp | CAGGGGGAGGAGGTCGAGGCTGGATGTCCCTGGTGCGCATATAGGAGAGCAACTACAGTAATTTCAATCTaGGTGGCCGGGACGCTACGC | + |
|
Preference number: 5 (lower is better) Translates to: QGEEVEAGCPWCAYRRATTVISI*VAGTLR Trigger: GCGTAGCGTCCCGGCCACCAAGATTGAAATTACTGT...AGTTGCTCTCCTATATGCGCACCAGGGACATCCAGCCTCGACCTCCTCCCCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTCTGGGTCCCTCAGTCTCCCTCTCCAACACCCATGAGACAGAGACTGCGTCTGACGATGGCCTCTTaGGTCTGTGTCATGTCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RLWVPQSPSPTPMRQRLRLTMAS*VCVMSE Trigger: CTCCGACATGACACAGACCAAAGAGGCCATCGTCAG...ACGCAGTCTCTGTCTCATGGGTGTTGGAGAGGGAGACTGAGGGACCCAGAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR CAA 90 bp | ATGCCAAGCCTTTCTGAAGTCAGGGGGCAAAAAGCTTGTCAGCCAGCACTGATCGCAATGTCCCTGCAGTaGCTCAGCTCCTCGGCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: MPSLSEVRGQKACQPALIAMSLQ*LSSSAV Trigger: GACCGCCGAGGAGCTGAGCAACTGCAGGGACATTGC...GATCAGTGCTGGCTGACAAGCTTTTTGCCCCCTGACTTCAGAAAGGCTTGGCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS-3UTR CAA 90 bp | CCAAGCCTTTCTGAAGTCAGGGGGCAAAAAGCTTGTCAGCCAGCACTGATCAACGAACCATCCGAGATTTaGGCTGCAGCCCTGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: PSLSEVRGQKACQPALINEPSEI*AAALAT Trigger: GGTGGCCAGGGCTGCAGCCAAAATCTCGGATGGTTC...GTTGATCAGTGCTGGCTGACAAGCTTTTTGCCCCCTGACTTCAGAAAGGCTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
||
| CDS TCA 90 bp | CAAACAGATGGACAGAGGGCTAGCTCATTCTGGCGCTCACCACCTTaGCACAGTCCTGAACTGACTGGGCACCGGCACGACACAGTAATT | + |
|
Preference number: 5 (lower is better) Translates to: QTDGQRASSFWRSPP*HSPELTGHRHDTVI Trigger: AATTACTGTGTCGTGCCGGTGCCCAGTCAGTTCAGGACTGTGTCAAGGTGGTGAGCGCCAGAATGAGCTAGCCCTCTGTCCATCTGTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTCTGGGTCCCTCAGTCTCCCTCTCCAACACCCATGAGACAGAGACTGCGTTCTGGATTCAGTGTGTaGTCAATCACCTCGGTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: RLWVPQSPSPTPMRQRLRSGFSV*SITSVR Trigger: ACGAACCGAGGTGATTGACAACACACTGAATCCAGA...ACGCAGTCTCTGTCTCATGGGTGTTGGAGAGGGAGACTGAGGGACCCAGAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
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| CDS-3UTR CAA 90 bp | ACTGATCAACCTAGATGGCCCTCCTGGTCAGGTTCAGAGCTCCAGGTGCCTTTAACAGTAATTTCAATCTaGGTGGCCGGGACGCTACGC | + |
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Preference number: 5 (lower is better) Translates to: TDQPRWPSWSGSELQVPLTVISI*VAGTLR Trigger: GCGTAGCGTCCCGGCCACCAAGATTGAAATTACTGT...TAAAGGCACCTGGAGCTCTGAACCTGACCAGGAGGGCCATCTAGGTTGATCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041203.6 ENSMUST00000130191.8 |
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| CDS-3UTR CAA 90 bp | CAAAAAGCTTGTCAGCCAGCACTGATCAACCTAGATGGCCCTCCTGGTCAGGTTTTCACAACCTCTGTCTaGTGGCAGATGGTGAACGTG | + |
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Preference number: 5 (lower is better) Translates to: QKACQPALINLDGPPGQVFTTSV*WQMVNV Trigger: CACGTTCACCATCTGCCACAAGACAGAGGTTGTGAA...AACCTGACCAGGAGGGCCATCTAGGTTGATCAGTGCTGGCTGACAAGCTTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
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| CDS-3UTR CAA 90 bp | ACTGATCAACCTAGATGGCCCTCCTGGTCAGGTTCAGAGCTCCAGGTGCCTTTATGCAGGGGATTCCCATaGGAAGCAGTGAAGTCAATA | + |
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Preference number: 5 (lower is better) Translates to: TDQPRWPSWSGSELQVPLCRGFP*EAVKSI Trigger: TATTGACTTCACTGCTTCCAATGGGAATCCCCTGCA...TAAAGGCACCTGGAGCTCTGAACCTGACCAGGAGGGCCATCTAGGTTGATCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
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| CDS-3UTR CAA 90 bp | TGCTGGGATTTGAACTCAGGACCTTTGGAAGGGCAGTCAGTTCTCTTAGCCACTGTCACGGTCCCCGAGTaGGTATATTTCTTCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: CWDLNSGPLEGQSVLLATVTVPE*VYFFFL Trigger: CAAGAAGAAGAAATATACCAACTCGGGGACCGTGAC...AGTGGCTAAGAGAACTGACTGCCCTTCCAAAGGTCCTGAGTTCAAATCCCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
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| CDS-3UTR CAA 90 bp | CCTTTGGAAGGGCAGTCAGTTCTCTTAGCCACTGAGCCATCTCACCAGCCCACAATCGAAGCGGAGATTTaGCTTTTCCTCAAAGAAATA | + |
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Preference number: 5 (lower is better) Translates to: PLEGQSVLLATEPSHQPTIEAEI*LFLKEI Trigger: TATTTCTTTGAGGAAAAGCAAAATCTCCGCTTCGAT...TGTGGGCTGGTGAGATGGCTCAGTGGCTAAGAGAACTGACTGCCCTTCCAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
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| CDS-3UTR CAA 90 bp | GTAGCTGTCTTCAGACACACAAGAAGAGGGTATCAAATCTCATTAATGGTGGTTCAGGGCCAGGAATGCTaGTCCCAGGAAATCCTTCGG | + |
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Preference number: 5 (lower is better) Translates to: VAVFRHTRRGYQISLMVVQGQEC*SQEILR Trigger: CCGAAGGATTTCCTGGGACAAGCATTCCTGGCCCTG...AACCACCATTAATGAGATTTGATACCCTCTTCTTGTGTGTCTGAAGACAGCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
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| CDS-3UTR CAA 90 bp | CTCTTAGCCACTGAGCCATCTCACCAGCCCACACGTTTTCTTACAATATTTGAACATCCAGCTCTTCCATaGCCTCAAACATGGCAGGTC | + |
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Preference number: 5 (lower is better) Translates to: LLATEPSHQPTRFLTIFEHPALP*PQTWQV Trigger: GACCTGCCATGTTTGAGGCAATGGAAGAGCTGGATG...TTCAAATATTGTAAGAAAACGTGTGGGCTGGTGAGATGGCTCAGTGGCTAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
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| CDS-3UTR CAA 90 bp | ATGAGTGCATTAGGATGGATGTTAACCTCACTGAAGTTATCATTACTCCCTCACTCAGCTAGTACATCCTaGGCCAGTCGGGCCATGCTC | + |
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Preference number: 5 (lower is better) Translates to: MSALGWMLTSLKLSLLPHSASTS*ASRAML Trigger: GAGCATGGCCCGACTGGCCAAGGATGTACTAGCTGA...GTGAGGGAGTAATGATAACTTCAGTGAGGTTAACATCCATCCTAATGCACTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
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| CDS-3UTR CAA 90 bp | TCAGGACCTTTGGAAGGGCAGTCAGTTCTCTTAGCCACTGAGCCATCTCACCAGGTATATTTCTTCTTCTaGCATTTCTTCCGAGGGTTA | + |
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Preference number: 5 (lower is better) Translates to: SGPLEGQSVLLATEPSHQVYFFF*HFFRGL Trigger: TAACCCTCGGAAGAAATGCAAGAAGAAGAAATATAC...CTGGTGAGATGGCTCAGTGGCTAAGAGAACTGACTGCCCTTCCAAAGGTCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
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| CDS-3UTR CAA 90 bp | TGTAGCTGTCTTCAGACACACAAGAAGAGGGTATCAAATCTCATTAATGGTGGTTCCTTTTTGTCCAGCTaGTTTGCACACAGCTGCATG | + |
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Preference number: 5 (lower is better) Translates to: CSCLQTHKKRVSNLINGGSFLSS*FAHSCM Trigger: CATGCAGCTGTGTGCAAACAAGCTGGACAAAAAGGA...ACCACCATTAATGAGATTTGATACCCTCTTCTTGTGTGTCTGAAGACAGCTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
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| CDS TCA 72 bp | GGACAGAGGGCTAGCTCATTCTGGCGCTCACCACCTTaGCACAGTCCTGAACTGACTGGGCACCGGCACGAC | + |
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Preference number: 6 (lower is better) Translates to: GQRASSFWRSPP*HSPELTGHRHD Trigger: GTCGTGCCGGTGCCCAGTCAGTTCAGGACTGTGTCAAGGTGGTGAGCGCCAGAATGAGCTAGCCCTCTGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130191.8 |
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| CDS CCA 72 bp | GGCTCTGCGTGTGAAGCACCACCATGGGGTCCGACTTaGAGAATGTATCCAGGTCTAGCAGATTCCGGCACG | + |
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Preference number: 6 (lower is better) Translates to: GSACEAPPWGPT*RMYPGLADSGT Trigger: CGTGCCGGAATCTGCTAGACCTGGATACATTCTCCAAGTCGGACCCCATGGTGGTGCTTCACACGCAGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041203.6 |
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