Pregenerated sensors for CPNE8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052560Ensembl transcript IDs: ENSMUST00000014777.9, ENSMUST00000064391.12, ENSMUST00000088649.11
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGTCTGCAGCACGTGTGTAGGAGGGGTGTACGGCGGGGGCGCCGGTaGTGGCTTGATTCCTCTGGCTCTCATGTAGGAAAGGAACTGCTC | + |
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Preference number: 1 (lower is better) Translates to: RLQHVCRRGVRRGRR*WLDSSGSHVGKELL Trigger: GAGCAGTTCCTTTCCTACATGAGAGCCAGAGGAATCAAGCCATCACCGGCGCCCCCGCCGTACACCCCTCCTACACACGTGCTGCAGACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
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| 3UTR CCA 90 bp | CTTCGCAGTTCCGACTGGCGTGTGAGGGACATCAGCATCTGGGCGTaGTCATATTTGCGTCTGCAGCACGTGTGTAGGAGGGGTGTACGG | + |
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Preference number: 1 (lower is better) Translates to: LRSSDWRVRDISIWA*SYLRLQHVCRRGVR Trigger: CCGTACACCCCTCCTACACACGTGCTGCAGACGCAAATATGACCACGCCCAGATGCTGATGTCCCTCACACGCCAGTCGGAACTGCGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
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| 3UTR TCA 90 bp | CAAGAGACTCCAGCCTGTGCAACCCGTGAAGGCAAGATGGAAGGGTaGGAATATAAATTCCAAAGCAAGAGAGCCAGTATCCCTTTGAAT | + |
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Preference number: 1 (lower is better) Translates to: QETPACATREGKMEG*EYKFQSKRASIPLN Trigger: ATTCAAAGGGATACTGGCTCTCTTGCTTTGGAATTTATATTCTCACCCTTCCATCTTGCCTTCACGGGTTGCACAGGCTGGAGTCTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
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| 3UTR CCA 90 bp | AACTATTTAGAATTGGTTGTGAGCAGGCAGGTCAGGGTAGAGGGATaGGTTATTTCACAAACAGGCAGGTTGGGGCACAGGAATGAGTTT | + |
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Preference number: 1 (lower is better) Translates to: NYLELVVSRQVRVEG*VISQTGRLGHRNEF Trigger: AAACTCATTCCTGTGCCCCAACCTGCCTGTTTGTGAAATAACCCATCCCTCTACCCTGACCTGCCTGCTCACAACCAATTCTAAATAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
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| 3UTR GCA 90 bp | AAGACATCTCTACTTTGCTTCAAGCATCTTAAACAATTTCCCGGTTaGTCATGCAACAACCCTATTTACAGTTTTGGTTTAGGAAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: KTSLLCFKHLKQFPG*SCNNPIYSFGLGRE Trigger: TTCTCTTCCTAAACCAAAACTGTAAATAGGGTTGTTGCATGAGCAACCGGGAAATTGTTTAAGATGCTTGAAGCAAAGTAGAGATGTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
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| 3UTR GCA 90 bp | TCTCTACTTTGCTTCAAGCATCTTAAACAATTTCCCGGTTGCTCATaGAACAACCCTATTTACAGTTTTGGTTTAGGAAGAGAATGTAAT | + |
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Preference number: 1 (lower is better) Translates to: SLLCFKHLKQFPGCS*NNPIYSFGLGRECN Trigger: ATTACATTCTCTTCCTAAACCAAAACTGTAAATAGGGTTGTTGCATGAGCAACCGGGAAATTGTTTAAGATGCTTGAAGCAAAGTAGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
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| 3UTR-3UTR GCA 90 bp | GTGAGCAGGCAGGTCAGGGTAGAGGGATGGGTTATTTCACAAACAGGCAGGTTGACGTTGAATTGTGACTaGCCTCTTGCGAGCTCCCGA | + |
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Preference number: 2 (lower is better) Translates to: VSRQVRVEGWVISQTGRLTLNCD*PLASSR Trigger: TCGGGAGCTCGCAAGAGGGCAGTCACAATTCAACGT...CAACCTGCCTGTTTGTGAAATAACCCATCCCTCTACCCTGACCTGCCTGCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
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| 3UTR-3UTR TCA 90 bp | CATAGGCATTCAGTTGGTAAGGGTTCATATAGTGGAGAGAAGTTGGCTGGGCAGTCTCCAATGAAATCATaGCTCCCGTCTCGGTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: HRHSVGKGSYSGEKLAGQSPMKS*LPSRSQ Trigger: CTGGGACCGAGACGGGAGTCATGATTTCATTGGAGA...CTGCCCAGCCAACTTCTCTCCACTATATGAACCCTTACCAACTGAATGCCTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
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| 3UTR-3UTR TCA 90 bp | TCTGTTAGCTATGAGGATTATGCATATTCTCCAGTAAAACAGCTTCATGCTTATCGGCGGGGGCGCCGGTaGTGGCTTGATTCCTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: SVSYEDYAYSPVKQLHAYRRGRR*WLDSSG Trigger: GCCAGAGGAATCAAGCCATCACCGGCGCCCCCGCCG...ATAAGCATGAAGCTGTTTTACTGGAGAATATGCATAATCCTCATAGCTAACAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
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| 3UTR-3UTR CCA 90 bp | ACAGGGTTGTGTGTACGTGGAACTGAGAACTCACAAGAGACTCCAGCCTGTGCAGTTGGCCCATACAACTaGACAGACTTCAGACTTCTA | + |
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Preference number: 2 (lower is better) Translates to: TGLCVRGTENSQETPACAVGPYN*TDFRLL Trigger: TAGAAGTCTGAAGTCTGTCCAGTTGTATGGGCCAAC...TGCACAGGCTGGAGTCTCTTGTGAGTTCTCAGTTCCACGTACACACAACCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
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| 3UTR CAA 90 bp | AACGATTTCTCCTACAGCCTTCAGTGCCATTCCATAGGCATTCAGTaGGTAAGGGTTCATATAGTGGAGAGAAGTTGGCTGGGCAGGGTT | + |
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Preference number: 2 (lower is better) Translates to: NDFSYSLQCHSIGIQ*VRVHIVERSWLGRV Trigger: AACCCTGCCCAGCCAACTTCTCTCCACTATATGAACCCTTACCAACTGAATGCCTATGGAATGGCACTGAAGGCTGTAGGAGAAATCGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
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| 3UTR-3UTR TCA 90 bp | ATTGAAAACTATTTAGAATTGGTTGTGAGCAGGCAGGTCAGGGTAGAGGGATGGATAGACGTTGAATTGTaGCTGCCCTCTTGCGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: IENYLELVVSRQVRVEGWIDVEL*LPSCEL Trigger: GAGCTCGCAAGAGGGCAGTCACAATTCAACGTCTAT...CCATCCCTCTACCCTGACCTGCCTGCTCACAACCAATTCTAAATAGTTTTCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
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| 3UTR-3UTR TCA 90 bp | ACATCGACACAGAGACTGCCGGCCTATATATGTAGCAGTCAAGGACAACATTTGCTGCTGAAACCAAACTaGGAAAGTGTCTCATTCCCT | + |
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Preference number: 2 (lower is better) Translates to: TSTQRLPAYICSSQGQHLLLKPN*ESVSFP Trigger: AGGGAATGAGACACTTTCTCAGTTTGGTTTCAGCAG...CAAATGTTGTCCTTGACTGCTACATATATAGGCCGGCAGTCTCTGTGTCGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
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| 3UTR-3UTR TCA 90 bp | ACGTGTAAACATCGACACAGAGACTGCCGGCCTATATATGTAGCAGTCAAGGACGGCAAGATGGAAGGGTaGGAATATAAATTCCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: TCKHRHRDCRPIYVAVKDGKMEG*EYKFQS Trigger: GCTTTGGAATTTATATTCTCACCCTTCCATCTTGCC...GTCCTTGACTGCTACATATATAGGCCGGCAGTCTCTGTGTCGATGTTTACACGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
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| 3UTR-3UTR TCA 90 bp | TGGGTTATTTCACAAACAGGCAGGTTGGGGCACAGGAATGAGTTTATTTCACAACCACCTCATAGACGTTaGATTGTGACTGCCCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: WVISQTGRLGHRNEFISQPPHRR*IVTALL Trigger: CAAGAGGGCAGTCACAATTCAACGTCTATGAGGTGG...TTGTGAAATAAACTCATTCCTGTGCCCCAACCTGCCTGTTTGTGAAATAACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
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| 3UTR-3UTR CCA 90 bp | GAGGGATGGGTTATTTCACAAACAGGCAGGTTGGGGCACAGGAATGAGTTTATTAGATATCCTTCCATCTaGAGGCAGCTTTGCACCAAA | + |
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Preference number: 2 (lower is better) Translates to: EGWVISQTGRLGHRNEFIRYPSI*RQLCTK Trigger: TTTGGTGCAAAGCTGCCTCCAGATGGAAGGATATCT...AATAAACTCATTCCTGTGCCCCAACCTGCCTGTTTGTGAAATAACCCATCCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
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| 3UTR-3UTR TCA 90 bp | CAGTGCCATTCCATAGGCATTCAGTTGGTAAGGGTTCATATAGTGGAGAGAAGTCTGCTGAAACCAAACTaGGAAAGTGTCTCATTCCCT | + |
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Preference number: 2 (lower is better) Translates to: QCHSIGIQLVRVHIVERSLLKPN*ESVSFP Trigger: AGGGAATGAGACACTTTCTCAGTTTGGTTTCAGCAG...ACTTCTCTCCACTATATGAACCCTTACCAACTGAATGCCTATGGAATGGCACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
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| 3UTR-3UTR TCA 90 bp | TTATTTCACAAACAGGCAGGTTGGGGCACAGGAATGAGTTTATTTCACAAACGTGTGTGTACGTGGAACTaGGAACTCACAAGAGACTCC | + |
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Preference number: 2 (lower is better) Translates to: LFHKQAGWGTGMSLFHKRVCTWN*ELTRDS Trigger: GGAGTCTCTTGTGAGTTCTCAGTTCCACGTACACAC...ACGTTTGTGAAATAAACTCATTCCTGTGCCCCAACCTGCCTGTTTGTGAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
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| 3UTR-3UTR TCA 90 bp | ACGTGTAAACATCGACACAGAGACTGCCGGCCTATATATGTAGCAGTCAAGGACTGTCAATATAATCCCTaGACGGCACAAACTGTACAA | + |
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Preference number: 2 (lower is better) Translates to: TCKHRHRDCRPIYVAVKDCQYNP*TAQTVQ Trigger: TTGTACAGTTTGTGCCGTTCAGGGATTATATTGACA...GTCCTTGACTGCTACATATATAGGCCGGCAGTCTCTGTGTCGATGTTTACACGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
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| 3UTR-3UTR TCA 90 bp | TCTGTTAGCTATGAGGATTATGCATATTCTCCAGTAAAACAGCTTCATGCTTATGCGCCGGTGATGGCTTaGTTCCTCTGGCTCTCATGT | + |
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Preference number: 2 (lower is better) Translates to: SVSYEDYAYSPVKQLHAYAPVMA*FLWLSC Trigger: ACATGAGAGCCAGAGGAATCAAGCCATCACCGGCGC...ATAAGCATGAAGCTGTTTTACTGGAGAATATGCATAATCCTCATAGCTAACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
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| 3UTR-3UTR CCA 90 bp | CACAGGAATGAGTTTATTTCACAAACGTGTTGTGTGCTAAGTCACAGGGTTGTGTGGAGAGAAGTTGGCTaGGCAGGGTTTCCATTTGAT | + |
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Preference number: 2 (lower is better) Translates to: HRNEFISQTCCVLSHRVVWREVG*AGFPFD Trigger: ATCAAATGGAAACCCTGCCCAGCCAACTTCTCTCCA...CACAACCCTGTGACTTAGCACACAACACGTTTGTGAAATAAACTCATTCCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
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| 3UTR-3UTR CCA 90 bp | CACAGGAATGAGTTTATTTCACAAACGTGTTGTGTGCTAAGTCACAGGGTTGTGTTACGGGAGCAAAGTTaGTTGGCCCATACAACTGGA | + |
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Preference number: 2 (lower is better) Translates to: HRNEFISQTCCVLSHRVVLREQS*LAHTTG Trigger: TCCAGTTGTATGGGCCAACCAACTTTGCTCCCGTAA...CACAACCCTGTGACTTAGCACACAACACGTTTGTGAAATAAACTCATTCCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
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| 3UTR-3UTR TCA 90 bp | GAGTTTATTTCACAAACGTGTTGTGTGCTAAGTCACAGGGTTGTGTGTACGTGGGGCAAGATGGAAGGGTaGGAATATAAATTCCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: EFISQTCCVLSHRVVCTWGKMEG*EYKFQS Trigger: GCTTTGGAATTTATATTCTCACCCTTCCATCTTGCC...CCACGTACACACAACCCTGTGACTTAGCACACAACACGTTTGTGAAATAAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
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| 3UTR-3UTR GCA 90 bp | CCCGTGAAGGCAAGATGGAAGGGTGAGAATATAAATTCCAAAGCAAGAGAGCCAACAGTTCACGATGTTTaGCTGTTCATTGCTTCTAGT | + |
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Preference number: 2 (lower is better) Translates to: PVKARWKGENINSKAREPTVHDV*LFIASS Trigger: ACTAGAAGCAATGAACAGGCAAACATCGTGAACTGT...TGGCTCTCTTGCTTTGGAATTTATATTCTCACCCTTCCATCTTGCCTTCACGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
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| 3UTR-3UTR GCA 90 bp | CACAGGAATGAGTTTATTTCACAAACGTGTTGTGTGCTAAGTCACAGGGTTGTGATCCAATTCAACCATTaGATCAAATTCTGCAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: HRNEFISQTCCVLSHRVVIQFNH*IKFCRS Trigger: GGACCTGCAGAATTTGATGCAATGGTTGAATTGGAT...CACAACCCTGTGACTTAGCACACAACACGTTTGTGAAATAAACTCATTCCTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
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| 3UTR-3UTR GCA 90 bp | ACAGTTCACGATGTTTGCCTGTTCATTGCTTCTAGTTGGCATTTGAAAGATAAAGAGATCTTGAACGCTTaGCACACAGGATTTAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: TVHDVCLFIASSWHLKDKEILNA*HTGFRV Trigger: CACTCTAAATCCTGTGTGGCAAGCGTTCAAGATCTC...TTTATCTTTCAAATGCCAACTAGAAGCAATGAACAGGCAAACATCGTGAACTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
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| 3UTR-3UTR CCA 90 bp | TTCTCTTCCCTTATTCATACCATGAATGTCCAGACAGTCATTCAAAGAGATATTATAGTGGAGAGAAGTTaGCTGGGCAGGGTTTCCATT | + |
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Preference number: 2 (lower is better) Translates to: FSSLIHTMNVQTVIQRDIIVERS*LGRVSI Trigger: AATGGAAACCCTGCCCAGCCAACTTCTCTCCACTAT...AATATCTCTTTGAATGACTGTCTGGACATTCATGGTATGAATAAGGGAAGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTTCCCTTATTCATACCATGAATGTCCAGACAGTCATTCAAAGAGATATTGGCAGGGTTTCCATTTaGTGCTGTAAAATCAATGGC | + |
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Preference number: 2 (lower is better) Translates to: FSSLIHTMNVQTVIQRDIGRVSI*CCKING Trigger: GCCATTGATTTTACAGCATCAAATGGAAACCCTGCC...AATATCTCTTTGAATGACTGTCTGGACATTCATGGTATGAATAAGGGAAGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
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| 3UTR-3UTR TCA 90 bp | GTACTTAAAAATGGACAATTCACGTCACAGTTATGTAACTGTGACTCTGTTAGCTATAGTAAGCTTCCATaGCACCTTCAATGCCATCAC | + |
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Preference number: 2 (lower is better) Translates to: VLKNGQFTSQLCNCDSVSYSKLP*HLQCHH Trigger: GTGATGGCATTGAAGGTGTCATGGAAGCTTACTATA...GCTAACAGAGTCACAGTTACATAACTGTGACGTGAATTGTCCATTTTTAAGTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
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| 3UTR-3UTR GCA 90 bp | GAGGATTATGCATATTCTCCAGTAAAACAGCTTCATGCTTATAAAAGTCACCATCATTGCATCAAATTCTaGAGGTCCCACACCTACTAT | + |
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Preference number: 2 (lower is better) Translates to: EDYAYSPVKQLHAYKSHHHCIKF*RSHTYY Trigger: ATAGTAGGTGTGGGACCTGCAGAATTTGATGCAATG...ATGGTGACTTTTATAAGCATGAAGCTGTTTTACTGGAGAATATGCATAATCCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
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| 3UTR-3UTR CCA 90 bp | TACTTAAAAATGGACAATTCACGTCACAGTTATGTAACTGTGACTCTGTTAGCTCCCGTGAAGGCAAGATaGAAGGGTGAGAATATAAAT | + |
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Preference number: 2 (lower is better) Translates to: YLKMDNSRHSYVTVTLLAPVKAR*KGENIN Trigger: ATTTATATTCTCACCCTTCCATCTTGCCTTCACGGG...AGCTAACAGAGTCACAGTTACATAACTGTGACGTGAATTGTCCATTTTTAAGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
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| 3UTR-3UTR TCA 90 bp | TACTTAAAAATGGACAATTCACGTCACAGTTATGTAACTGTGACTCTGTTAGCTATGGATTCTTTAGTTTaGGCCATATCTGAGATGACG | + |
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Preference number: 2 (lower is better) Translates to: YLKMDNSRHSYVTVTLLAMDSLV*AISEMT Trigger: CGTCATCTCAGATATGGCTCAAACTAAAGAATCCAT...AGCTAACAGAGTCACAGTTACATAACTGTGACGTGAATTGTCCATTTTTAAGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
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| 3UTR-3UTR GCA 90 bp | GAGGATTATGCATATTCTCCAGTAAAACAGCTTCATGCTTATAAAAGTCACCATAGCTTCCATCCTCATTaGTTCGATAAAATACCAGGA | + |
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Preference number: 2 (lower is better) Translates to: EDYAYSPVKQLHAYKSHHSFHPH*FDKIPG Trigger: TCCTGGTATTTTATCGAAGCAATGAGGATGGAAGCT...ATGGTGACTTTTATAAGCATGAAGCTGTTTTACTGGAGAATATGCATAATCCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
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| 3UTR-3UTR CCA 90 bp | TACTTAAAAATGGACAATTCACGTCACAGTTATGTAACTGTGACTCTGTTAGCTACCTGCTACATGGTTTaGAGTTATATAGTCTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: YLKMDNSRHSYVTVTLLATCYMV*SYIVLF Trigger: AAACAAGACTATATAACTCCAAACCATGTAGCAGGT...AGCTAACAGAGTCACAGTTACATAACTGTGACGTGAATTGTCCATTTTTAAGTA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
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| 3UTR TCA 72 bp | CACGTGTGTAGGAGGGGTGTACGGCGGGGGCGCCGGTaGTGGCTTGATTCCTCTGGCTCTCATGTAGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: HVCRRGVRRGRR*WLDSSGSHVGK Trigger: CTTTCCTACATGAGAGCCAGAGGAATCAAGCCATCACCGGCGCCCCCGCCGTACACCCCTCCTACACACGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
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| 3UTR CCA 72 bp | TCCGACTGGCGTGTGAGGGACATCAGCATCTGGGCGTaGTCATATTTGCGTCTGCAGCACGTGTGTAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: SDWRVRDISIWA*SYLRLQHVCRR Trigger: CCTCCTACACACGTGCTGCAGACGCAAATATGACCACGCCCAGATGCTGATGTCCCTCACACGCCAGTCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
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| 3UTR TCA 72 bp | AAAGAGAACAACAATTGCCTAGGACGCATCACTCCCTaGTTGGCTGCAGCCCATGGCCGAGCTGACGTTCAC | + |
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Preference number: 3 (lower is better) Translates to: KENNNCLGRITP*LAAAHGRADVH Trigger: GTGAACGTCAGCTCGGCCATGGGCTGCAGCCAATCAGGGAGTGATGCGTCCTAGGCAATTGTTGTTCTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014777.9 |
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| 3UTR CCA 72 bp | GAATTGGTTGTGAGCAGGCAGGTCAGGGTAGAGGGATaGGTTATTTCACAAACAGGCAGGTTGGGGCACAGG | + |
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Preference number: 3 (lower is better) Translates to: ELVVSRQVRVEG*VISQTGRLGHR Trigger: CCTGTGCCCCAACCTGCCTGTTTGTGAAATAACCCATCCCTCTACCCTGACCTGCCTGCTCACAACCAATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
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| 3UTR TCA 72 bp | TGTGTGCTAAGTCACAGGGTTGTGTGTACGTGGAACTaGGAACTCACAAGAGACTCCAGCCTGTGCAACCCG | + |
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Preference number: 3 (lower is better) Translates to: CVLSHRVVCTWN*ELTRDSSLCNP Trigger: CGGGTTGCACAGGCTGGAGTCTCTTGTGAGTTCTCAGTTCCACGTACACACAACCCTGTGACTTAGCACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
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| 3UTR-3UTR CAA 90 bp | GTGAGCAGGCAGGTCAGGGTAGAGGGATGGGTTATTTCACAAACAGGCAGGTTGTCCATAGGCATTCAGTaGGTAAGGGTTCATATAGTG | + |
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Preference number: 3 (lower is better) Translates to: VSRQVRVEGWVISQTGRLSIGIQ*VRVHIV Trigger: CACTATATGAACCCTTACCAACTGAATGCCTATGGA...CAACCTGCCTGTTTGTGAAATAACCCATCCCTCTACCCTGACCTGCCTGCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
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| 3UTR TCA 72 bp | CCAGCCTGTGCAACCCGTGAAGGCAAGATGGAAGGGTaGGAATATAAATTCCAAAGCAAGAGAGCCAGTATC | + |
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Preference number: 3 (lower is better) Translates to: PACATREGKMEG*EYKFQSKRASI Trigger: GATACTGGCTCTCTTGCTTTGGAATTTATATTCTCACCCTTCCATCTTGCCTTCACGGGTTGCACAGGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
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| 3UTR-3UTR CAA 90 bp | GTGAGCAGGCAGGTCAGGGTAGAGGGATGGGTTATTTCACAAACAGGCAGGTTGGGAAGAGAATGTAATTaGGATCCAAGAAAGCACATT | + |
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Preference number: 3 (lower is better) Translates to: VSRQVRVEGWVISQTGRLGRECN*DPRKHI Trigger: AATGTGCTTTCTTGGATCCAAATTACATTCTCTTCC...CAACCTGCCTGTTTGTGAAATAACCCATCCCTCTACCCTGACCTGCCTGCTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
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| 3UTR-3UTR CAA 90 bp | TTATTTCACAAACAGGCAGGTTGGGGCACAGGAATGAGTTTATTTCACAAACGTATTGTGACTGCCCTCTaGCGAGCTCCCGATAGCTTG | + |
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Preference number: 3 (lower is better) Translates to: LFHKQAGWGTGMSLFHKRIVTAL*RAPDSL Trigger: CAAGCTATCGGGAGCTCGCAAGAGGGCAGTCACAAT...ACGTTTGTGAAATAAACTCATTCCTGTGCCCCAACCTGCCTGTTTGTGAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
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| 3UTR GCA 72 bp | CACCTTCAATGCCATCACAGTAAGGATTCTGAGGGTTaGCATTCAGGGCAAACTCGTGAGATATCCTTCCAT | + |
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Preference number: 3 (lower is better) Translates to: HLQCHHSKDSEG*HSGQTREISFH Trigger: ATGGAAGGATATCTCACGAGTTTGCCCTGAATGGCAACCCTCAGAATCCTTACTGTGATGGCATTGAAGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
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| 3UTR CCA 72 bp | AAGAGACTCCAGCCTGTGCAACCCGTGAAGGCAAGATaGAAGGGTGAGAATATAAATTCCAAAGCAAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: KRLQPVQPVKAR*KGENINSKARE Trigger: CTCTCTTGCTTTGGAATTTATATTCTCACCCTTCCATCTTGCCTTCACGGGTTGCACAGGCTGGAGTCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
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| 3UTR CCA 72 bp | GAGCCATCTTTTACAGAGGATGCGTATCTTGCTACGTaGTTTATTACGGGAGCAAAGTTGGTTGGCCCATAC | + |
|
Preference number: 3 (lower is better) Translates to: EPSFTEDAYLAT*FITGAKLVGPY Trigger: GTATGGGCCAACCAACTTTGCTCCCGTAATAAACCACGTAGCAAGATACGCATCCTCTGTAAAAGATGGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
||
| 3UTR-3UTR CAA 90 bp | ACGTGTAAACATCGACACAGAGACTGCCGGCCTATATATGTAGCAGTCAAGGACTATTTCACAAACGTGTaGTGTGCTAAGTCACAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: TCKHRHRDCRPIYVAVKDYFTNV*CAKSQG Trigger: ACCCTGTGACTTAGCACACAACACGTTTGTGAAATA...GTCCTTGACTGCTACATATATAGGCCGGCAGTCTCTGTGTCGATGTTTACACGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
||
| 3UTR TCA 72 bp | TCTCAGCTAAGACATCTTTGGCCAGTCTCGCCATGCTaGGTATGTGGTTTCCACTTCTGTCAATATAATCCC | + |
|
Preference number: 3 (lower is better) Translates to: SQLRHLWPVSPC*VCGFHFCQYNP Trigger: GGGATTATATTGACAGAAGTGGAAACCACATACTCAGCATGGCGAGACTGGCCAAAGATGTCTTAGCTGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
||
| 3UTR TCA 72 bp | GGAAGCTTTGAGGCATTAACTATGGATTCTTTAGTTTaGGCCATATCTGAGATGACGCCGTCCGTCACAATG | + |
|
Preference number: 3 (lower is better) Translates to: GSFEALTMDSLV*AISEMTPSVTM Trigger: CATTGTGACGGACGGCGTCATCTCAGATATGGCTCAAACTAAAGAATCCATAGTTAATGCCTCAAAGCTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
||
| 3UTR GCA 72 bp | AAGCACAAAGTACTGGGAGCCATCTTTTACAGAGGATaGGTATCTTGCTACGTGGTTTATTACGGGAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: KHKVLGAIFYRG*VSCYVVYYGSK Trigger: TTTGCTCCCGTAATAAACCACGTAGCAAGATACGCATCCTCTGTAAAAGATGGCTCCCAGTACTTTGTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
||
| 3UTR-3UTR CAA 90 bp | ACGTGTAAACATCGACACAGAGACTGCCGGCCTATATATGTAGCAGTCAAGGACGCTTCTAGTTGGCATTaGAAAGATAAATTGACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: TCKHRHRDCRPIYVAVKDASSWH*KDKLTA Trigger: TGCAGTCAATTTATCTTTCAAATGCCAACTAGAAGC...GTCCTTGACTGCTACATATATAGGCCGGCAGTCTCTGTGTCGATGTTTACACGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
||
| 3UTR-3UTR CAA 90 bp | GAGGGATGGGTTATTTCACAAACAGGCAGGTTGGGGCACAGGAATGAGTTTATTATCACTGTCATAATCTaGAACGATTTCTCCTACAGC | + |
|
Preference number: 3 (lower is better) Translates to: EGWVISQTGRLGHRNEFIITVII*NDFSYS Trigger: GCTGTAGGAGAAATCGTTCAAGATTATGACAGTGAT...AATAAACTCATTCCTGTGCCCCAACCTGCCTGTTTGTGAAATAACCCATCCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
||
| 3UTR TCA 72 bp | ACTGGACAGACTTCAGACTTCTATAGTAAGCTTCCATaGCACCTTCAATGCCATCACAGTAAGGATTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: TGQTSDFYSKLP*HLQCHHSKDSE Trigger: CTCAGAATCCTTACTGTGATGGCATTGAAGGTGTCATGGAAGCTTACTATAGAAGTCTGAAGTCTGTCCAGT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
||
| 3UTR GCA 72 bp | GTCATAATCTTGAACGATTTCTCCTACAGCCTTCAGTaGCATTCCATAGGCATTCAGTTGGTAAGGGTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: VIILNDFSYSLQ*HSIGIQLVRVH Trigger: ATGAACCCTTACCAACTGAATGCCTATGGAATGGCACTGAAGGCTGTAGGAGAAATCGTTCAAGATTATGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
||
| 3UTR-3UTR CAA 90 bp | CCCGTGAAGGCAAGATGGAAGGGTGAGAATATAAATTCCAAAGCAAGAGAGCCAGCTTCTAGTTGGCATTaGAAAGATAAATTGACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PVKARWKGENINSKAREPASSWH*KDKLTA Trigger: TGCAGTCAATTTATCTTTCAAATGCCAACTAGAAGC...TGGCTCTCTTGCTTTGGAATTTATATTCTCACCCTTCCATCTTGCCTTCACGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
||
| 3UTR-3UTR CAA 90 bp | GTACTTAAAAATGGACAATTCACGTCACAGTTATGTAACTGTGACTCTGTTAGCTCACAAACAGGCAGGTaGGGGCACAGGAATGAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: VLKNGQFTSQLCNCDSVSSQTGR*GHRNEF Trigger: AAACTCATTCCTGTGCCCCAACCTGCCTGTTTGTGA...GCTAACAGAGTCACAGTTACATAACTGTGACGTGAATTGTCCATTTTTAAGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCTTCCCTTATTCATACCATGAATGTCCAGACAGTCATTCAAAGAGATATTTATAGTGGAGAGAAGTaGGCTGGGCAGGGTTTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: FSSLIHTMNVQTVIQRDIYSGEK*AGQGFH Trigger: ATGGAAACCCTGCCCAGCCAACTTCTCTCCACTATA...AATATCTCTTTGAATGACTGTCTGGACATTCATGGTATGAATAAGGGAAGAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
||
| 3UTR-3UTR CAA 90 bp | TCTGTTAGCTATGAGGATTATGCATATTCTCCAGTAAAACAGCTTCATGCTTATCACCATAGATCCAAGTaGTGGCAAGAGCACACACAA | + |
|
Preference number: 3 (lower is better) Translates to: SVSYEDYAYSPVKQLHAYHHRSK*WQEHTQ Trigger: TTGTGTGTGCTCTTGCCACAACTTGGATCTATGGTG...ATAAGCATGAAGCTGTTTTACTGGAGAATATGCATAATCCTCATAGCTAACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
||
| 3UTR-3UTR CAA 90 bp | AAGACATCTCTACTTTGCTTCAAGCATCTTAAACAATTTCCCGGTTGCTCATGCGGAAGAGAATGTAATTaGGATCCAAGAAAGCACATT | + |
|
Preference number: 3 (lower is better) Translates to: KTSLLCFKHLKQFPGCSCGRECN*DPRKHI Trigger: AATGTGCTTTCTTGGATCCAAATTACATTCTCTTCC...GCATGAGCAACCGGGAAATTGTTTAAGATGCTTGAAGCAAAGTAGAGATGTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
||
| 3UTR-3UTR CAA 90 bp | GTACTTAAAAATGGACAATTCACGTCACAGTTATGTAACTGTGACTCTGTTAGCGAAAACTATTTAGAATaGGTTGTGAGCAGGCAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: VLKNGQFTSQLCNCDSVSENYLE*VVSRQV Trigger: GACCTGCCTGCTCACAACCAATTCTAAATAGTTTTC...GCTAACAGAGTCACAGTTACATAACTGTGACGTGAATTGTCCATTTTTAAGTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
||
| 3UTR GCA 72 bp | TGCTTCAAGCATCTTAAACAATTTCCCGGTTGCTCATaGAACAACCCTATTTACAGTTTTGGTTTAGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: CFKHLKQFPGCS*NNPIYSFGLGR Trigger: TCTTCCTAAACCAAAACTGTAAATAGGGTTGTTGCATGAGCAACCGGGAAATTGTTTAAGATGCTTGAAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
||
| 3UTR-3UTR CAA 90 bp | GAGGATTATGCATATTCTCCAGTAAAACAGCTTCATGCTTATAAAAGTCACCATCATCCAATTCAACCATaGCATCAAATTCTGCAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: EDYAYSPVKQLHAYKSHHHPIQP*HQILQV Trigger: GACCTGCAGAATTTGATGCAATGGTTGAATTGGATG...ATGGTGACTTTTATAAGCATGAAGCTGTTTTACTGGAGAATATGCATAATCCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
||
| 3UTR CCA 72 bp | CAAACTGTACAATATCTCTTTCAGCATATTTCCCTCTaGAGGAAACTCTTACATCATCTCCATCCAATTCAA | + |
|
Preference number: 3 (lower is better) Translates to: QTVQYLFQHISL*RKLLHHLHPIQ Trigger: TTGAATTGGATGGAGATGATGTAAGAGTTTCCTCCAGAGGGAAATATGCTGAAAGAGATATTGTACAGTTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
||
| 3UTR GCA 72 bp | TATAAGGATGGTGGTTTTTATACAAAGTATATTCTGTaGATTAACAGTTCACGATGTTTGCCTGTTCATTGC | + |
|
Preference number: 3 (lower is better) Translates to: YKDGGFYTKYIL*INSSRCLPVHC Trigger: GCAATGAACAGGCAAACATCGTGAACTGTTAATGCACAGAATATACTTTGTATAAAAACCACCATCCTTATA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
||
| CDS-3UTR CCA 90 bp | GTGAGCAGGCAGGTCAGGGTAGAGGGATGGGTTATTTCACAAACAGGCAGGTTGAGTCCCCGATGCCCGTaGCGCTGGTGTAGCGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSRQVRVEGWVISQTGRLSPRCP*RWCSGC Trigger: ACAGCCGCTACACCAGCGCCACGGGCATCGGGGACT...CAACCTGCCTGTTTGTGAAATAACCCATCCCTCTACCCTGACCTGCCTGCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
||
| CDS-3UTR CCA 90 bp | ACAGGGTTGTGTGTACGTGGAACTGAGAACTCACAAGAGACTCCAGCCTGTGCACGATGCCCGTGGCGCTaGTGTAGCGGCTGTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: TGLCVRGTENSQETPACARCPWR*CSGCPS Trigger: AGATGGACAGCCGCTACACCAGCGCCACGGGCATCG...TGCACAGGCTGGAGTCTCTTGTGAGTTCTCAGTTCCACGTACACACAACCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
||
| CDS-3UTR TCA 90 bp | GTGAGCAGGCAGGTCAGGGTAGAGGGATGGGTTATTTCACAAACAGGCAGGTTGCGCCGTCCGTCACAATaGGAAGCACAAAGTACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSRQVRVEGWVISQTGRLRRPSQ*EAQSTG Trigger: CCCAGTACTTTGTGCTTCTCATTGTGACGGACGGCG...CAACCTGCCTGTTTGTGAAATAACCCATCCCTCTACCCTGACCTGCCTGCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR CCA 90 bp | ACGTGTAAACATCGACACAGAGACTGCCGGCCTATATATGTAGCAGTCAAGGACCTCGTGTGGCGGGGATaGCCGCACTCAGCTGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TCKHRHRDCRPIYVAVKDLVWRG*PHSAGS Trigger: TGAACCAGCTGAGTGCGGCCATCCCCGCCACACGAG...GTCCTTGACTGCTACATATATAGGCCGGCAGTCTCTGTGTCGATGTTTACACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
||
| CDS-3UTR GCA 90 bp | AGCAGAGCACCAGGATCAAAGCACAGGCTTCGCAGTTCCGACTGGCGTGTGAGGGAGATCTTGAACGCTTaGCACACAGGATTTAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SRAPGSKHRLRSSDWRVREILNA*HTGFRV Trigger: CACTCTAAATCCTGTGTGGCAAGCGTTCAAGATCTC...CCTCACACGCCAGTCGGAACTGCGAAGCCTGTGCTTTGATCCTGGTGCTCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR CCA 90 bp | ATTGCTTACATCTTATGGGGCCAGAGTGTAAGAAGCAAGAGAGAGCGAAGCAAGCGATGCCCGTGGCGCTaGTGTAGCGGCTGTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: IAYILWGQSVRSKRERSKRCPWR*CSGCPS Trigger: AGATGGACAGCCGCTACACCAGCGCCACGGGCATCG...CTTGCTTCGCTCTCTCTTGCTTCTTACACTCTGGCCCCATAAGATGTAAGCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014777.9 |
||
| CDS-3UTR CCA 90 bp | ACGGCAAAGCTTTATTGCTTACATCTTATGGGGCCAGAGTGTAAGAAGCAAGAGAGTCCCCGATGCCCGTaGCGCTGGTGTAGCGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TAKLYCLHLMGPECKKQESPRCP*RWCSGC Trigger: ACAGCCGCTACACCAGCGCCACGGGCATCGGGGACT...CTCTTGCTTCTTACACTCTGGCCCCATAAGATGTAAGCAATAAAGCTTTGCCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014777.9 |
||
| CDS-3UTR GCA 90 bp | AGCTTTATTGCTTACATCTTATGGGGCCAGAGTGTAAGAAGCAAGAGAGAGCGAGGTTCAAGTCCCCGATaGCCGTGGCGCTGGTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFIAYILWGQSVRSKRERGSSPR*PWRWCS Trigger: GCTACACCAGCGCCACGGGCATCGGGGACTTGAACC...TCGCTCTCTCTTGCTTCTTACACTCTGGCCCCATAAGATGTAAGCAATAAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014777.9 |
||
| CDS-3UTR GCA 90 bp | AGCAGAGCACCAGGATCAAAGCACAGGCTTCGCAGTTCCGACTGGCGTGTGAGGTTGTCCCACATTTCCTaGCTGGAATTCCTATGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SRAPGSKHRLRSSDWRVRLSHIS*LEFLCL Trigger: CAAACATAGGAATTCCAGGCAGGAAATGTGGGACAA...CCTCACACGCCAGTCGGAACTGCGAAGCCTGTGCTTTGATCCTGGTGCTCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
||
| CDS-3UTR CCA 90 bp | ACGGCAAAGCTTTATTGCTTACATCTTATGGGGCCAGAGTGTAAGAAGCAAGAGCTCGTGTGGCGGGGATaGCCGCACTCAGCTGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TAKLYCLHLMGPECKKQELVWRG*PHSAGS Trigger: TGAACCAGCTGAGTGCGGCCATCCCCGCCACACGAG...CTCTTGCTTCTTACACTCTGGCCCCATAAGATGTAAGCAATAAAGCTTTGCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014777.9 |
||
| CDS-3UTR TCA 90 bp | CATAGGCATTCAGTTGGTAAGGGTTCATATAGTGGAGAGAAGTTGGCTGGGCAGATTTCTGCAGGACACTaGCACCTCCACTCGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HRHSVGKGSYSGEKLAGQISAGH*HLHSCG Trigger: GCCACACGAGTGGAGGTGTCAGTGTCCTGCAGAAAT...CTGCCCAGCCAACTTCTCTCCACTATATGAACCCTTACCAACTGAATGCCTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
||
| CDS-3UTR CCA 90 bp | AGCTTTATTGCTTACATCTTATGGGGCCAGAGTGTAAGAAGCAAGAGAGAGCGAATGGCCGCACTCAGCTaGTTCAAGTCCCCGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SFIAYILWGQSVRSKRERMAALS*FKSPMP Trigger: GGGCATCGGGGACTTGAACCAGCTGAGTGCGGCCAT...TCGCTCTCTCTTGCTTCTTACACTCTGGCCCCATAAGATGTAAGCAATAAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014777.9 |
||
| CDS-3UTR CCA 90 bp | AACTATTTAGAATTGGTTGTGAGCAGGCAGGTCAGGGTAGAGGGATGGGTTATTATGGCCGCACTCAGCTaGTTCAAGTCCCCGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NYLELVVSRQVRVEGWVIMAALS*FKSPMP Trigger: GGGCATCGGGGACTTGAACCAGCTGAGTGCGGCCAT...AATAACCCATCCCTCTACCCTGACCTGCCTGCTCACAACCAATTCTAAATAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
||
| CDS-3UTR TCA 90 bp | GAGGGATGGGTTATTTCACAAACAGGCAGGTTGGGGCACAGGAATGAGTTTATTATTTCTGCAGGACACTaGCACCTCCACTCGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EGWVISQTGRLGHRNEFIISAGH*HLHSCG Trigger: GCCACACGAGTGGAGGTGTCAGTGTCCTGCAGAAAT...AATAAACTCATTCCTGTGCCCCAACCTGCCTGTTTGTGAAATAACCCATCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
||
| CDS-3UTR TCA 90 bp | GAGGATTATGCATATTCTCCAGTAAAACAGCTTCATGCTTATAAAAGTCACCATCGGCGGGGGCGCCGGTaGTGGCTTGATTCCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EDYAYSPVKQLHAYKSHHRRGRR*WLDSSG Trigger: GCCAGAGGAATCAAGCCATCACCGGCGCCCCCGCCG...ATGGTGACTTTTATAAGCATGAAGCTGTTTTACTGGAGAATATGCATAATCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR CCA 90 bp | TTATTTCACAAACAGGCAGGTTGGGGCACAGGAATGAGTTTATTTCACAAACGTCGATGCCCGTGGCGCTaGTGTAGCGGCTGTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LFHKQAGWGTGMSLFHKRRCPWR*CSGCPS Trigger: AGATGGACAGCCGCTACACCAGCGCCACGGGCATCG...ACGTTTGTGAAATAAACTCATTCCTGTGCCCCAACCTGCCTGTTTGTGAAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
||
| CDS-3UTR CCA 90 bp | CACAGGAATGAGTTTATTTCACAAACGTGTTGTGTGCTAAGTCACAGGGTTGTGATGGCCGCACTCAGCTaGTTCAAGTCCCCGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HRNEFISQTCCVLSHRVVMAALS*FKSPMP Trigger: GGGCATCGGGGACTTGAACCAGCTGAGTGCGGCCAT...CACAACCCTGTGACTTAGCACACAACACGTTTGTGAAATAAACTCATTCCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
||
| 3UTR CAA 72 bp | GAAAGGAACTGCTCTGGGATCTCAGCTAAGACATCTTaGGCCAGTCTCGCCATGCTGAGTATGTGGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ERNCSGISAKTS*ASLAMLSMWFP Trigger: TGGAAACCACATACTCAGCATGGCGAGACTGGCCAAAGATGTCTTAGCTGAGATCCCAGAGCAGTTCCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
||
| CDS-3UTR TCA 90 bp | ACGGCAAAGCTTTATTGCTTACATCTTATGGGGCCAGAGTGTAAGAAGCAAGAGATTTCTGCAGGACACTaGCACCTCCACTCGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TAKLYCLHLMGPECKKQEISAGH*HLHSCG Trigger: GCCACACGAGTGGAGGTGTCAGTGTCCTGCAGAAAT...CTCTTGCTTCTTACACTCTGGCCCCATAAGATGTAAGCAATAAAGCTTTGCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014777.9 |
||
| CDS-3UTR TCA 90 bp | ACATCGACACAGAGACTGCCGGCCTATATATGTAGCAGTCAAGGACAACATTTGTCTCCAATGAAATCATaGCTCCCGTCTCGGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TSTQRLPAYICSSQGQHLSPMKS*LPSRSQ Trigger: CTGGGACCGAGACGGGAGTCATGATTTCATTGGAGA...CAAATGTTGTCCTTGACTGCTACATATATAGGCCGGCAGTCTCTGTGTCGATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR TCA 90 bp | CTGTACATTGAAAACTATTTAGAATTGGTTGTGAGCAGGCAGGTCAGGGTAGAGGCGCCGGTGATGGCTTaGTTCCTCTGGCTCTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: LYIENYLELVVSRQVRVEAPVMA*FLWLSC Trigger: ACATGAGAGCCAGAGGAATCAAGCCATCACCGGCGC...CTCTACCCTGACCTGCCTGCTCACAACCAATTCTAAATAGTTTTCAATGTACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR TCA 90 bp | GAGTTTATTTCACAAACGTGTTGTGTGCTAAGTCACAGGGTTGTGTGTACGTGGCCTCTGCCGTCAGTATaGTTGTCCCACATTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EFISQTCCVLSHRVVCTWPLPSV*LSHISC Trigger: GCAGGAAATGTGGGACAATCATACTGACGGCAGAGG...CCACGTACACACAACCCTGTGACTTAGCACACAACACGTTTGTGAAATAAACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
||
| CDS-3UTR TCA 90 bp | ACAGGGTTGTGTGTACGTGGAACTGAGAACTCACAAGAGACTCCAGCCTGTGCATATAGTAAGCTTCCATaGCACCTTCAATGCCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: TGLCVRGTENSQETPACAYSKLP*HLQCHH Trigger: GTGATGGCATTGAAGGTGTCATGGAAGCTTACTATA...TGCACAGGCTGGAGTCTCTTGTGAGTTCTCAGTTCCACGTACACACAACCCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR TCA 90 bp | GTGAGCAGGCAGGTCAGGGTAGAGGGATGGGTTATTTCACAAACAGGCAGGTTGTGTCAATATAATCCCTaGACGGCACAAACTGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: VSRQVRVEGWVISQTGRLCQYNP*TAQTVQ Trigger: TTGTACAGTTTGTGCCGTTCAGGGATTATATTGACA...CAACCTGCCTGTTTGTGAAATAACCCATCCCTCTACCCTGACCTGCCTGCTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR GCA 90 bp | GTACTTAAAAATGGACAATTCACGTCACAGTTATGTAACTGTGACTCTGTTAGCGGTTCAAGTCCCCGATaGCCGTGGCGCTGGTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLKNGQFTSQLCNCDSVSGSSPR*PWRWCS Trigger: GCTACACCAGCGCCACGGGCATCGGGGACTTGAACC...GCTAACAGAGTCACAGTTACATAACTGTGACGTGAATTGTCCATTTTTAAGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
||
| CDS-3UTR GCA 90 bp | GTGAGCAGGCAGGTCAGGGTAGAGGGATGGGTTATTTCACAAACAGGCAGGTTGATCCAATTCAACCATTaGATCAAATTCTGCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSRQVRVEGWVISQTGRLIQFNH*IKFCRS Trigger: GGACCTGCAGAATTTGATGCAATGGTTGAATTGGAT...CAACCTGCCTGTTTGTGAAATAACCCATCCCTCTACCCTGACCTGCCTGCTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR CCA 90 bp | ACAGTTCACGATGTTTGCCTGTTCATTGCTTCTAGTTGGCATTTGAAAGATAAACTCGTGTGGCGGGGATaGCCGCACTCAGCTGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TVHDVCLFIASSWHLKDKLVWRG*PHSAGS Trigger: TGAACCAGCTGAGTGCGGCCATCCCCGCCACACGAG...TTTATCTTTCAAATGCCAACTAGAAGCAATGAACAGGCAAACATCGTGAACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
||
| CDS-3UTR TCA 90 bp | ACATCGACACAGAGACTGCCGGCCTATATATGTAGCAGTCAAGGACAACATTTGTTCAGGGCAAACTCGTaGGATATCCTTCCATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSTQRLPAYICSSQGQHLFRANS*DILPSG Trigger: TCCAGATGGAAGGATATCTCACGAGTTTGCCCTGAA...CAAATGTTGTCCTTGACTGCTACATATATAGGCCGGCAGTCTCTGTGTCGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR TCA 90 bp | TGGGTTATTTCACAAACAGGCAGGTTGGGGCACAGGAATGAGTTTATTTCACAACCAGTCTCGCCATGCTaGGTATGTGGTTTCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: WVISQTGRLGHRNEFISQPVSPC*VCGFHF Trigger: GAAGTGGAAACCACATACTCAGCATGGCGAGACTGG...TTGTGAAATAAACTCATTCCTGTGCCCCAACCTGCCTGTTTGTGAAATAACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR GCA 90 bp | GAGGATTATGCATATTCTCCAGTAAAACAGCTTCATGCTTATAAAAGTCACCATGGTTCAAGTCCCCGATaGCCGTGGCGCTGGTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: EDYAYSPVKQLHAYKSHHGSSPR*PWRWCS Trigger: GCTACACCAGCGCCACGGGCATCGGGGACTTGAACC...ATGGTGACTTTTATAAGCATGAAGCTGTTTTACTGGAGAATATGCATAATCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
||
| CDS-3UTR GCA 90 bp | TGGGTTATTTCACAAACAGGCAGGTTGGGGCACAGGAATGAGTTTATTTCACAAACGTTGAATTGTGACTaGCCTCTTGCGAGCTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: WVISQTGRLGHRNEFISQTLNCD*PLASSR Trigger: TCGGGAGCTCGCAAGAGGGCAGTCACAATTCAACGT...TTGTGAAATAAACTCATTCCTGTGCCCCAACCTGCCTGTTTGTGAAATAACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR CCA 90 bp | GAGGGATGGGTTATTTCACAAACAGGCAGGTTGGGGCACAGGAATGAGTTTATTTGGAGAGAAGTTGGCTaGGCAGGGTTTCCATTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: EGWVISQTGRLGHRNEFIWREVG*AGFPFD Trigger: ATCAAATGGAAACCCTGCCCAGCCAACTTCTCTCCA...AATAAACTCATTCCTGTGCCCCAACCTGCCTGTTTGTGAAATAACCCATCCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| 3UTR CAA 72 bp | TCCTACAGCCTTCAGTGCCATTCCATAGGCATTCAGTaGGTAAGGGTTCATATAGTGGAGAGAAGTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SYSLQCHSIGIQ*VRVHIVERSWL Trigger: CAGCCAACTTCTCTCCACTATATGAACCCTTACCAACTGAATGCCTATGGAATGGCACTGAAGGCTGTAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
||
| CDS-3UTR GCA 90 bp | ATTGCTTACATCTTATGGGGCCAGAGTGTAAGAAGCAAGAGAGAGCGAAGCAAGTATCAAGGAGATTTCTaGAGGACACTGACACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IAYILWGQSVRSKRERSKYQGDF*RTLTPP Trigger: TGGAGGTGTCAGTGTCCTGCAGAAATCTCCTTGATA...CTTGCTTCGCTCTCTCTTGCTTCTTACACTCTGGCCCCATAAGATGTAAGCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014777.9 |
||
| CDS-3UTR CCA 90 bp | ATTGAAAACTATTTAGAATTGGTTGTGAGCAGGCAGGTCAGGGTAGAGGGATGGATAGTGGAGAGAAGTTaGCTGGGCAGGGTTTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: IENYLELVVSRQVRVEGWIVERS*LGRVSI Trigger: AATGGAAACCCTGCCCAGCCAACTTCTCTCCACTAT...CCATCCCTCTACCCTGACCTGCCTGCTCACAACCAATTCTAAATAGTTTTCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR CCA 90 bp | AACTATTTAGAATTGGTTGTGAGCAGGCAGGTCAGGGTAGAGGGATGGGTTATTTTACGGGAGCAAAGTTaGTTGGCCCATACAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NYLELVVSRQVRVEGWVILREQS*LAHTTG Trigger: TCCAGTTGTATGGGCCAACCAACTTTGCTCCCGTAA...AATAACCCATCCCTCTACCCTGACCTGCCTGCTCACAACCAATTCTAAATAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| 3UTR CAA 72 bp | AGGGTAGAGGGATGGGTTATTTCACAAACAGGCAGGTaGGGGCACAGGAATGAGTTTATTTCACAAACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RVEGWVISQTGR*GHRNEFISQTC Trigger: ACACGTTTGTGAAATAAACTCATTCCTGTGCCCCAACCTGCCTGTTTGTGAAATAACCCATCCCTCTACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
||
| CDS-3UTR TCA 90 bp | ACAGTTCACGATGTTTGCCTGTTCATTGCTTCTAGTTGGCATTTGAAAGATAAACAGGCGACTTCCCTGTaGACCAACAATCTCCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TVHDVCLFIASSWHLKDKQATSL*TNNLPQ Trigger: TTGGGGGAGATTGTTGGTTCACAGGGAAGTCGCCTG...TTTATCTTTCAAATGCCAACTAGAAGCAATGAACAGGCAAACATCGTGAACTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR TCA 90 bp | GAGTTTATTTCACAAACGTGTTGTGTGCTAAGTCACAGGGTTGTGTGTACGTGGGGCAGGGTTTCCATTTaGTGCTGTAAAATCAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: EFISQTCCVLSHRVVCTWGRVSI*CCKING Trigger: GCCATTGATTTTACAGCATCAAATGGAAACCCTGCC...CCACGTACACACAACCCTGTGACTTAGCACACAACACGTTTGTGAAATAAACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR GCA 90 bp | GAGGGATGGGTTATTTCACAAACAGGCAGGTTGGGGCACAGGAATGAGTTTATTTTGTCCCACATTTCCTaGCTGGAATTCCTACTATTG | + |
|
Preference number: 4 (lower is better) Translates to: EGWVISQTGRLGHRNEFILSHIS*LEFLLL Trigger: CAATAGTAGGAATTCCAGGCAGGAAATGTGGGACAA...AATAAACTCATTCCTGTGCCCCAACCTGCCTGTTTGTGAAATAACCCATCCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR CCA 90 bp | ATTGAAAACTATTTAGAATTGGTTGTGAGCAGGCAGGTCAGGGTAGAGGGATGGTGGAATTCCTACTATTaGCTTTTCCAGGCGACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IENYLELVVSRQVRVEGWWNSYY*LFQATS Trigger: GGAAGTCGCCTGGAAAAGCCAATAGTAGGAATTCCA...CCATCCCTCTACCCTGACCTGCCTGCTCACAACCAATTCTAAATAGTTTTCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR CCA 90 bp | TCACAAACAGGCAGGTTGGGGCACAGGAATGAGTTTATTTCACAAACGTGTTGTCCCACATTTCCTGCCTaGAATTCCTACTATTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQTGRLGHRNEFISQTCCPTFPA*NSYYWL Trigger: AAGCCAATAGTAGGAATTCCAGGCAGGAAATGTGGG...ACAACACGTTTGTGAAATAAACTCATTCCTGTGCCCCAACCTGCCTGTTTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR CCA 90 bp | TTATTTCACAAACAGGCAGGTTGGGGCACAGGAATGAGTTTATTTCACAAACGTGGGAGCAAAGTTGGTTaGCCCATACAACTGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LFHKQAGWGTGMSLFHKRGSKVG*PIQLDR Trigger: TCTGTCCAGTTGTATGGGCCAACCAACTTTGCTCCC...ACGTTTGTGAAATAAACTCATTCCTGTGCCCCAACCTGCCTGTTTGTGAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR CCA 90 bp | CCCGTGAAGGCAAGATGGAAGGGTGAGAATATAAATTCCAAAGCAAGAGAGCCAAGAAGCACAAAGTACTaGGAGCCATCTTTTACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PVKARWKGENINSKAREPRSTKY*EPSFTE Trigger: CTCTGTAAAAGATGGCTCCCAGTACTTTGTGCTTCT...TGGCTCTCTTGCTTTGGAATTTATATTCTCACCCTTCCATCTTGCCTTCACGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR GCA 90 bp | TGGGTTATTTCACAAACAGGCAGGTTGGGGCACAGGAATGAGTTTATTTCACAATATCAAGGAGATTTCTaGAGGACACTGACACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WVISQTGRLGHRNEFISQYQGDF*RTLTPP Trigger: TGGAGGTGTCAGTGTCCTGCAGAAATCTCCTTGATA...TTGTGAAATAAACTCATTCCTGTGCCCCAACCTGCCTGTTTGTGAAATAACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
||
| CDS-3UTR CCA 90 bp | CACAGAGACTGCCGGCCTATATATGTAGCAGTCAAGGACAACATTTGTGTTAAAAGATATCCTTCCATCTaGAGGCAGCTTTGCACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HRDCRPIYVAVKDNICVKRYPSI*RQLCTK Trigger: TTTGGTGCAAAGCTGCCTCCAGATGGAAGGATATCT...TTTAACACAAATGTTGTCCTTGACTGCTACATATATAGGCCGGCAGTCTCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR CCA 90 bp | CACAGGAATGAGTTTATTTCACAAACGTGTTGTGTGCTAAGTCACAGGGTTGTGGTTGGCCCATACAACTaGACAGACTTCAGACTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: HRNEFISQTCCVLSHRVVVGPYN*TDFRLL Trigger: TAGAAGTCTGAAGTCTGTCCAGTTGTATGGGCCAAC...CACAACCCTGTGACTTAGCACACAACACGTTTGTGAAATAAACTCATTCCTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR CCA 90 bp | AACTATTTAGAATTGGTTGTGAGCAGGCAGGTCAGGGTAGAGGGATGGGTTATTCAGCATATTTCCCTCTaGAGGAAACTCTTACATCAT | + |
|
Preference number: 4 (lower is better) Translates to: NYLELVVSRQVRVEGWVIQHISL*RKLLHH Trigger: ATGATGTAAGAGTTTCCTCCAGAGGGAAATATGCTG...AATAACCCATCCCTCTACCCTGACCTGCCTGCTCACAACCAATTCTAAATAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR TCA 90 bp | TCTGTTAGCTATGAGGATTATGCATATTCTCCAGTAAAACAGCTTCATGCTTATATAGACGTTGAATTGTaGCTGCCCTCTTGCGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVSYEDYAYSPVKQLHAYIDVEL*LPSCEL Trigger: GAGCTCGCAAGAGGGCAGTCACAATTCAACGTCTAT...ATAAGCATGAAGCTGTTTTACTGGAGAATATGCATAATCCTCATAGCTAACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR TCA 90 bp | TACTTAAAAATGGACAATTCACGTCACAGTTATGTAACTGTGACTCTGTTAGCTCCACCTCATAGACGTTaGATTGTGACTGCCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YLKMDNSRHSYVTVTLLAPPHRR*IVTALL Trigger: CAAGAGGGCAGTCACAATTCAACGTCTATGAGGTGG...AGCTAACAGAGTCACAGTTACATAACTGTGACGTGAATTGTCCATTTTTAAGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR GCA 90 bp | GAGGATTATGCATATTCTCCAGTAAAACAGCTTCATGCTTATAAAAGTCACCATTCAAGACAGCATCCCTaGAGCAGTTTAGCTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EDYAYSPVKQLHAYKSHHSRQHP*SSLAPL Trigger: CAGAGGAGCTAAACTGCTGCAGGGATGCTGTCTTGA...ATGGTGACTTTTATAAGCATGAAGCTGTTTTACTGGAGAATATGCATAATCCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
||
| CDS-3UTR GCA 90 bp | TACTTAAAAATGGACAATTCACGTCACAGTTATGTAACTGTGACTCTGTTAGCTTCAAGACAGCATCCCTaGAGCAGTTTAGCTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YLKMDNSRHSYVTVTLLASRQHP*SSLAPL Trigger: CAGAGGAGCTAAACTGCTGCAGGGATGCTGTCTTGA...AGCTAACAGAGTCACAGTTACATAACTGTGACGTGAATTGTCCATTTTTAAGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064391.12 ENSMUST00000088649.11 |
||
| CDS-3UTR CCA 90 bp | ATTCAACCATTGCATCAAATTCTGCAGGTCCCACACCTACTATTATTATTGACACCCACATTTCCTGCCTaGAATTCCTATGTTTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: IQPLHQILQVPHLLLLLTPTFPA*NSYVWT Trigger: TGTCCAAACATAGGAATTCCAGGCAGGAAATGTGGG...TGTCAATAATAATAGTAGGTGTGGGACCTGCAGAATTTGATGCAATGGTTGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
||
| CDS-3UTR GCA 90 bp | TACTTAAAAATGGACAATTCACGTCACAGTTATGTAACTGTGACTCTGTTAGCTCATTGCATCAAATTCTaGAGGTCCCACACCTACTAT | + |
|
Preference number: 4 (lower is better) Translates to: YLKMDNSRHSYVTVTLLAHCIKF*RSHTYY Trigger: ATAGTAGGTGTGGGACCTGCAGAATTTGATGCAATG...AGCTAACAGAGTCACAGTTACATAACTGTGACGTGAATTGTCCATTTTTAAGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR TCA 90 bp | TTCTCTTCCCTTATTCATACCATGAATGTCCAGACAGTCATTCAAAGAGATATTATGGATTCTTTAGTTTaGGCCATATCTGAGATGACG | + |
|
Preference number: 4 (lower is better) Translates to: FSSLIHTMNVQTVIQRDIMDSLV*AISEMT Trigger: CGTCATCTCAGATATGGCTCAAACTAAAGAATCCAT...AATATCTCTTTGAATGACTGTCTGGACATTCATGGTATGAATAAGGGAAGAGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR GCA 90 bp | TCTGTTAGCTATGAGGATTATGCATATTCTCCAGTAAAACAGCTTCATGCTTATAGCTTCCATCCTCATTaGTTCGATAAAATACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SVSYEDYAYSPVKQLHAYSFHPH*FDKIPG Trigger: TCCTGGTATTTTATCGAAGCAATGAGGATGGAAGCT...ATAAGCATGAAGCTGTTTTACTGGAGAATATGCATAATCCTCATAGCTAACAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS CCA 90 bp | TGGCGGGGATGGCCGCACTCAGCTGGTTCAAGTCCCCGATGCCCGTaGCGCTGGTGTAGCGGCTGTCCATCTCGAGCTGAGGAACGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: WRGWPHSAGSSPRCP*RWCSGCPSRAEERS Trigger: GCTCCGTTCCTCAGCTCGAGATGGACAGCCGCTACACCAGCGCCACGGGCATCGGGGACTTGAACCAGCTGAGTGCGGCCATCCCCGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014777.9 ENSMUST00000064391.12 ENSMUST00000088649.11 |
||
| CDS GCA 90 bp | CTCGTGTGGCGGGGATGGCCGCACTCAGCTGGTTCAAGTCCCCGATaGCCGTGGCGCTGGTGTAGCGGCTGTCCATCTCGAGCTGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LVWRGWPHSAGSSPR*PWRWCSGCPSRAEE Trigger: TTCCTCAGCTCGAGATGGACAGCCGCTACACCAGCGCCACGGGCATCGGGGACTTGAACCAGCTGAGTGCGGCCATCCCCGCCACACGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014777.9 ENSMUST00000064391.12 ENSMUST00000088649.11 |
||
| CDS CCA 90 bp | GGAGATTTCTGCAGGACACTGACACCTCCACTCGTGTGGCGGGGATaGCCGCACTCAGCTGGTTCAAGTCCCCGATGCCCGTGGCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GDFCRTLTPPLVWRG*PHSAGSSPRCPWRW Trigger: CCAGCGCCACGGGCATCGGGGACTTGAACCAGCTGAGTGCGGCCATCCCCGCCACACGAGTGGAGGTGTCAGTGTCCTGCAGAAATCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014777.9 ENSMUST00000064391.12 ENSMUST00000088649.11 |
||
| CDS CCA 90 bp | GGATGGCCGCACTCAGCTGGTTCAAGTCCCCGATGCCCGTGGCGCTaGTGTAGCGGCTGTCCATCTCGAGCTGAGGAACGGAGCACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GWPHSAGSSPRCPWR*CSGCPSRAEERSTC Trigger: ACAAGTGCTCCGTTCCTCAGCTCGAGATGGACAGCCGCTACACCAGCGCCACGGGCATCGGGGACTTGAACCAGCTGAGTGCGGCCATCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000014777.9 ENSMUST00000064391.12 ENSMUST00000088649.11 |
||
| CDS CCA 90 bp | CTCTATCAAGGAGATTTCTGCAGGACACTGACACCTCCACTCGTGTaGCGGGGATGGCCGCACTCAGCTGGTTCAAGTCCCCGATGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LYQGDFCRTLTPPLV*RGWPHSAGSSPRCP Trigger: CGGGCATCGGGGACTTGAACCAGCTGAGTGCGGCCATCCCCGCCACACGAGTGGAGGTGTCAGTGTCCTGCAGAAATCTCCTTGATAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014777.9 ENSMUST00000064391.12 ENSMUST00000088649.11 |
||
| CDS-3UTR CAA 90 bp | ACGTGTAAACATCGACACAGAGACTGCCGGCCTATATATGTAGCAGTCAAGGACATTGTGACTGCCCTCTaGCGAGCTCCCGATAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TCKHRHRDCRPIYVAVKDIVTAL*RAPDSL Trigger: CAAGCTATCGGGAGCTCGCAAGAGGGCAGTCACAAT...GTCCTTGACTGCTACATATATAGGCCGGCAGTCTCTGTGTCGATGTTTACACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS TCA 90 bp | TCAAGACAGCATCCCTGCAGCAGTTTAGCTCCTCTGCCGTCAGTATaGTTGTCCCACATTTCCTGCCTGGAATTCCTATGTTTGGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: SRQHPCSSLAPLPSV*LSHISCLEFLCLDK Trigger: CTTGTCCAAACATAGGAATTCCAGGCAGGAAATGTGGGACAATCATACTGACGGCAGAGGAGCTAAACTGCTGCAGGGATGCTGTCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
||
| CDS-3UTR CAA 90 bp | ACAGGGTTGTGTGTACGTGGAACTGAGAACTCACAAGAGACTCCAGCCTGTGCATCATGTTTGGACAAGTaGGGACTCTTAGAATCAACA | + |
|
Preference number: 5 (lower is better) Translates to: TGLCVRGTENSQETPACASCLDK*GLLEST Trigger: TGTTGATTCTAAGAGTCCCAACTTGTCCAAACATGA...TGCACAGGCTGGAGTCTCTTGTGAGTTCTCAGTTCCACGTACACACAACCCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR CAA 90 bp | AACTATTTAGAATTGGTTGTGAGCAGGCAGGTCAGGGTAGAGGGATGGGTTATTCTGGAATTCCTACTATaGGCTTTTCCAGGCGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: NYLELVVSRQVRVEGWVILEFLL*AFPGDF Trigger: GAAGTCGCCTGGAAAAGCCAATAGTAGGAATTCCAG...AATAACCCATCCCTCTACCCTGACCTGCCTGCTCACAACCAATTCTAAATAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR CAA 90 bp | AAGACATCTCTACTTTGCTTCAAGCATCTTAAACAATTTCCCGGTTGCTCATGCTATAGTGGAGAGAAGTaGGCTGGGCAGGGTTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: KTSLLCFKHLKQFPGCSCYSGEK*AGQGFH Trigger: ATGGAAACCCTGCCCAGCCAACTTCTCTCCACTATA...GCATGAGCAACCGGGAAATTGTTTAAGATGCTTGAAGCAAAGTAGAGATGTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR CAA 90 bp | GAGGGATGGGTTATTTCACAAACAGGCAGGTTGGGGCACAGGAATGAGTTTATTCTATGTTTGGACAAGTaGGGACTCTTAGAATCAACA | + |
|
Preference number: 5 (lower is better) Translates to: EGWVISQTGRLGHRNEFILCLDK*GLLEST Trigger: TGTTGATTCTAAGAGTCCCAACTTGTCCAAACATAG...AATAAACTCATTCCTGTGCCCCAACCTGCCTGTTTGTGAAATAACCCATCCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
||
| CDS-3UTR CAA 90 bp | GAGTTTATTTCACAAACGTGTTGTGTGCTAAGTCACAGGGTTGTGTGTACGTGGTCCTTCTTATCCAATTaGTTTGCACAGAACTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: EFISQTCCVLSHRVVCTWSFLSN*FAQNCI Trigger: GATGCAGTTCTGTGCAAACAAATTGGATAAGAAGGA...CCACGTACACACAACCCTGTGACTTAGCACACAACACGTTTGTGAAATAAACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR CAA 90 bp | CACAGAGACTGCCGGCCTATATATGTAGCAGTCAAGGACAACATTTGTGTTAAATCCATAGGCATTCAGTaGGTAAGGGTTCATATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: HRDCRPIYVAVKDNICVKSIGIQ*VRVHIV Trigger: CACTATATGAACCCTTACCAACTGAATGCCTATGGA...TTTAACACAAATGTTGTCCTTGACTGCTACATATATAGGCCGGCAGTCTCTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR CAA 90 bp | ATTGAAAACTATTTAGAATTGGTTGTGAGCAGGCAGGTCAGGGTAGAGGGATGGATCACTGTCATAATCTaGAACGATTTCTCCTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: IENYLELVVSRQVRVEGWITVII*NDFSYS Trigger: GCTGTAGGAGAAATCGTTCAAGATTATGACAGTGAT...CCATCCCTCTACCCTGACCTGCCTGCTCACAACCAATTCTAAATAGTTTTCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR CAA 90 bp | ATTGAAAACTATTTAGAATTGGTTGTGAGCAGGCAGGTCAGGGTAGAGGGATGGCAATGTACAAAACACTaGTCCCAGAAAGTCATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: IENYLELVVSRQVRVEGWQCTKH*SQKVMF Trigger: AAACATGACTTTCTGGGACAAGTGTTTTGTACATTG...CCATCCCTCTACCCTGACCTGCCTGCTCACAACCAATTCTAAATAGTTTTCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
||
| CDS-3UTR CAA 90 bp | TCTGTTAGCTATGAGGATTATGCATATTCTCCAGTAAAACAGCTTCATGCTTATCATCCAATTCAACCATaGCATCAAATTCTGCAGGTC | + |
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Preference number: 5 (lower is better) Translates to: SVSYEDYAYSPVKQLHAYHPIQP*HQILQV Trigger: GACCTGCAGAATTTGATGCAATGGTTGAATTGGATG...ATAAGCATGAAGCTGTTTTACTGGAGAATATGCATAATCCTCATAGCTAACAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
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| CDS GCA 72 bp | CGGGGATGGCCGCACTCAGCTGGTTCAAGTCCCCGATaGCCGTGGCGCTGGTGTAGCGGCTGTCCATCTCGA | + |
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Preference number: 6 (lower is better) Translates to: RGWPHSAGSSPR*PWRWCSGCPSR Trigger: TCGAGATGGACAGCCGCTACACCAGCGCCACGGGCATCGGGGACTTGAACCAGCTGAGTGCGGCCATCCCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014777.9 ENSMUST00000064391.12 ENSMUST00000088649.11 |
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| CDS CCA 72 bp | TGGCCGCACTCAGCTGGTTCAAGTCCCCGATGCCCGTaGCGCTGGTGTAGCGGCTGTCCATCTCGAGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: WPHSAGSSPRCP*RWCSGCPSRAE Trigger: CTCAGCTCGAGATGGACAGCCGCTACACCAGCGCCACGGGCATCGGGGACTTGAACCAGCTGAGTGCGGCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000014777.9 ENSMUST00000064391.12 ENSMUST00000088649.11 |
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| CDS CCA 72 bp | TGCAGGACACTGACACCTCCACTCGTGTGGCGGGGATaGCCGCACTCAGCTGGTTCAAGTCCCCGATGCCCG | + |
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Preference number: 6 (lower is better) Translates to: CRTLTPPLVWRG*PHSAGSSPRCP Trigger: CGGGCATCGGGGACTTGAACCAGCTGAGTGCGGCCATCCCCGCCACACGAGTGGAGGTGTCAGTGTCCTGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014777.9 ENSMUST00000064391.12 ENSMUST00000088649.11 |
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| CDS CCA 72 bp | CACTCAGCTGGTTCAAGTCCCCGATGCCCGTGGCGCTaGTGTAGCGGCTGTCCATCTCGAGCTGAGGAACGG | + |
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Preference number: 6 (lower is better) Translates to: HSAGSSPRCPWR*CSGCPSRAEER Trigger: CCGTTCCTCAGCTCGAGATGGACAGCCGCTACACCAGCGCCACGGGCATCGGGGACTTGAACCAGCTGAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000014777.9 ENSMUST00000064391.12 ENSMUST00000088649.11 |
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| CDS CCA 72 bp | GGAGATTTCTGCAGGACACTGACACCTCCACTCGTGTaGCGGGGATGGCCGCACTCAGCTGGTTCAAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: GDFCRTLTPPLV*RGWPHSAGSSP Trigger: GGGACTTGAACCAGCTGAGTGCGGCCATCCCCGCCACACGAGTGGAGGTGTCAGTGTCCTGCAGAAATCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000014777.9 ENSMUST00000064391.12 ENSMUST00000088649.11 |
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| CDS TCA 72 bp | AAATGTATCTCTATCAAGGAGATTTCTGCAGGACACTaGCACCTCCACTCGTGTGGCGGGGATGGCCGCACT | + |
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Preference number: 6 (lower is better) Translates to: KCISIKEISAGH*HLHSCGGDGRT Trigger: AGTGCGGCCATCCCCGCCACACGAGTGGAGGTGTCAGTGTCCTGCAGAAATCTCCTTGATAGAGATACATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000014777.9 ENSMUST00000064391.12 ENSMUST00000088649.11 |
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| CDS TCA 72 bp | CATCCCTGCAGCAGTTTAGCTCCTCTGCCGTCAGTATaGTTGTCCCACATTTCCTGCCTGGAATTCCTACTA | + |
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Preference number: 6 (lower is better) Translates to: HPCSSLAPLPSV*LSHISCLEFLL Trigger: TAGTAGGAATTCCAGGCAGGAAATGTGGGACAATCATACTGACGGCAGAGGAGCTAAACTGCTGCAGGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064391.12 |
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| CDS TCA 72 bp | CATCCCTGCAGCAGTTTAGCTCCTCTGCCGTCAGTATaGTTGTCCCACATTTCCTGCCTGGAATTCCTATGT | + |
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Preference number: 6 (lower is better) Translates to: HPCSSLAPLPSV*LSHISCLEFLC Trigger: ACATAGGAATTCCAGGCAGGAAATGTGGGACAATCATACTGACGGCAGAGGAGCTAAACTGCTGCAGGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088649.11 |
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