Pregenerated sensors for CPNE7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034796Ensembl transcript IDs: ENSMUST00000037900.9
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGCCAGCAGAACACAGGAGCAGGGCTGGGAGGCCTGGGCTGGGTaGTCAGTTTCTGAGGATTTCTGGGGGCACGGGAGATGCCATAGA | + |
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Preference number: 1 (lower is better) Translates to: QASRTQEQGWEAWAG*SVSEDFWGHGRCHR Trigger: TCTATGGCATCTCCCGTGCCCCCAGAAATCCTCAGAAACTGATCACCCAGCCCAGGCCTCCCAGCCCTGCTCCTGTGTTCTGCTGGCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| 3UTR TCA 90 bp | TGGGCCAAGCTGGGCTTGAGGGCTCTTCTGAAGTGGTGCTATGATTaGCAGGAGAGTGACCTCAAGCAAGAGGGGAGAGCATCTTTGCAG | + |
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Preference number: 1 (lower is better) Translates to: WAKLGLRALLKWCYD*QESDLKQEGRASLQ Trigger: CTGCAAAGATGCTCTCCCCTCTTGCTTGAGGTCACTCTCCTGTCAATCATAGCACCACTTCAGAAGAGCCCTCAAGCCCAGCTTGGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| 3UTR GCA 90 bp | ATGATTGACAGGAGAGTGACCTCAAGCAAGAGGGGAGAGCATCTTTaGAGCCCCATTTCTTTCAGAACACCCTGCTCCTTGCCTGTTGGG | + |
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Preference number: 1 (lower is better) Translates to: MIDRRVTSSKRGEHL*SPISFRTPCSLPVG Trigger: CCCAACAGGCAAGGAGCAGGGTGTTCTGAAAGAAATGGGGCTGCAAAGATGCTCTCCCCTCTTGCTTGAGGTCACTCTCCTGTCAATCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| 3UTR-3UTR CCA 90 bp | ACAGGAGCGATCCCACCCATCTCTCTGGGCCAAGCTGGGCTTGAGGGCTCTTCTCTGCTCCTTGCCTGTTaGGTGCAGGGAGGCCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: TGAIPPISLGQAGLEGSSLLLAC*VQGGPE Trigger: CTCTGGGCCTCCCTGCACCCAACAGGCAAGGAGCAG...AGAAGAGCCCTCAAGCCCAGCTTGGCCCAGAGAGATGGGTGGGATCGCTCCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| 3UTR-3UTR CCA 90 bp | CCCCGCAGGCTCCAGGTGTGGGTACAGGTTGGAGAGGCACCAGACAGGACAGAGCAAAGTGCCCAGATATaGGTGTCCTCAAGGCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: PRRLQVWVQVGEAPDRTEQSAQI*VSSRLG Trigger: CCCAAGCCTTGAGGACACCCATATCTGGGCACTTTG...CTCTGTCCTGTCTGGTGCCTCTCCAACCTGTACCCACACCTGGAGCCTGCGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| 3UTR CAA 90 bp | CTAAGCTGTCTCCCAGGCCCCGCAGGCTCCAGGTGTGGGTACAGGTaGGAGAGGCACCAGACAGGACAGAGAAACCTATGGGGACAAAGT | + |
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Preference number: 2 (lower is better) Translates to: LSCLPGPAGSRCGYR*ERHQTGQRNLWGQS Trigger: ACTTTGTCCCCATAGGTTTCTCTGTCCTGTCTGGTGCCTCTCCAACCTGTACCCACACCTGGAGCCTGCGGGGCCTGGGAGACAGCTTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| 3UTR-3UTR GCA 90 bp | GGCAAGATTGTCCAGGTCGACCACCCCTTCACCACCCTTTCCATAGCTGAGCTGGAACACCCTGCTCCTTaGCTGTTGGGTGCAGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: GKIVQVDHPFTTLSIAELEHPAP*LLGAGR Trigger: CCTCCCTGCACCCAACAGGCAAGGAGCAGGGTGTTC...CAGCTCAGCTATGGAAAGGGTGGTGAAGGGGTGGTCGACCTGGACAATCTTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| 3UTR-3UTR GCA 90 bp | AGGCACCAGACAGGACAGAGAAACCTATGGGGACAAAGTGCCCAGATATGGGTGTCCTTGCCTGTTGGGTaGAGGGAGGCCCAGAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: RHQTGQRNLWGQSAQIWVSLPVG*REAQSW Trigger: CCAGCTCTGGGCCTCCCTGCACCCAACAGGCAAGGA...CACCCATATCTGGGCACTTTGTCCCCATAGGTTTCTCTGTCCTGTCTGGTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| 3UTR-3UTR GCA 90 bp | GGCTTGGGGTACTTCCTCTCTCCACACGATCAAATGGCAAGATTGTCCAGGTCGTGGGGGCACGGGAGATaGCATAGATGGACGGACGTA | + |
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Preference number: 2 (lower is better) Translates to: GLGYFLSPHDQMARLSRSWGHGR*HRWTDV Trigger: TACGTCCGTCCATCTATGGCATCTCCCGTGCCCCCA...CGACCTGGACAATCTTGCCATTTGATCGTGTGGAGAGAGGAAGTACCCCAAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| 3UTR-3UTR TCA 90 bp | GTGGGTACAGGTTGGAGAGGCACCAGACAGGACAGAGAAACCTATGGGGACAAAAAGTGGTGCTATGATTaGCAGGAGAGTGACCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: VGTGWRGTRQDRETYGDKKWCYD*QESDLK Trigger: CTTGAGGTCACTCTCCTGTCAATCATAGCACCACTT...TTTGTCCCCATAGGTTTCTCTGTCCTGTCTGGTGCCTCTCCAACCTGTACCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| 3UTR GCA 72 bp | TTTGCAGCCCCATTTCTTTCAGAACACCCTGCTCCTTaGCTGTTGGGTGCAGGGAGGCCCAGAGCTGGGGGA | + |
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Preference number: 3 (lower is better) Translates to: FAAPFLSEHPAP*LLGAGRPRAGG Trigger: TCCCCCAGCTCTGGGCCTCCCTGCACCCAACAGGCAAGGAGCAGGGTGTTCTGAAAGAAATGGGGCTGCAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| 3UTR-3UTR CAA 90 bp | AGGCACCAGACAGGACAGAGAAACCTATGGGGACAAAGTGCCCAGATATGGGTGCCTGCTCCTTGCCTGTaGGGTGCAGGGAGGCCCAGA | + |
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Preference number: 3 (lower is better) Translates to: RHQTGQRNLWGQSAQIWVPAPCL*GAGRPR Trigger: TCTGGGCCTCCCTGCACCCAACAGGCAAGGAGCAGG...CACCCATATCTGGGCACTTTGTCCCCATAGGTTTCTCTGTCCTGTCTGGTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| 3UTR TCA 72 bp | CCAGGTCGACCACCCCTTCACCACCCTTTCCATAGCTaGGCTGCCAGGATTATAACAGGAGCGATCCCACCC | + |
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Preference number: 3 (lower is better) Translates to: PGRPPLHHPFHS*AARIITGAIPP Trigger: GGGTGGGATCGCTCCTGTTATAATCCTGGCAGCTCAGCTATGGAAAGGGTGGTGAAGGGGTGGTCGACCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| 3UTR-3UTR CAA 90 bp | TGTGGGTACAGGTTGGAGAGGCACCAGACAGGACAGAGAAACCTATGGGGACAATGGGCCAAGCTGGGCTaGAGGGCTCTTCTGAAGTGG | + |
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Preference number: 3 (lower is better) Translates to: CGYRLERHQTGQRNLWGQWAKLG*RALLKW Trigger: CCACTTCAGAAGAGCCCTCAAGCCCAGCTTGGCCCA...TTGTCCCCATAGGTTTCTCTGTCCTGTCTGGTGCCTCTCCAACCTGTACCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| 3UTR TCA 72 bp | CTGGGCTTGAGGGCTCTTCTGAAGTGGTGCTATGATTaGCAGGAGAGTGACCTCAAGCAAGAGGGGAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: LGLRALLKWCYD*QESDLKQEGRA Trigger: TGCTCTCCCCTCTTGCTTGAGGTCACTCTCCTGTCAATCATAGCACCACTTCAGAAGAGCCCTCAAGCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| 3UTR CCA 72 bp | AAGGCTTGGGGTACTTCCTCTCTCCACACGATCAAATaGCAAGATTGTCCAGGTCGACCACCCCTTCACCAC | + |
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Preference number: 3 (lower is better) Translates to: KAWGTSSLHTIK*QDCPGRPPLHH Trigger: GTGGTGAAGGGGTGGTCGACCTGGACAATCTTGCCATTTGATCGTGTGGAGAGAGGAAGTACCCCAAGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| 3UTR CCA 72 bp | AGGTTGGAGAGGCACCAGACAGGACAGAGAAACCTATaGGGACAAAGTGCCCAGATATGGGTGTCCTCAAGG | + |
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Preference number: 3 (lower is better) Translates to: RLERHQTGQRNL*GQSAQIWVSSR Trigger: CCTTGAGGACACCCATATCTGGGCACTTTGTCCCCATAGGTTTCTCTGTCCTGTCTGGTGCCTCTCCAACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| 3UTR-3UTR CAA 90 bp | GTGGGTACAGGTTGGAGAGGCACCAGACAGGACAGAGAAACCTATGGGGACAAAGAGGGGAGAGCATCTTaGCAGCCCCATTTCTTTCAG | + |
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Preference number: 3 (lower is better) Translates to: VGTGWRGTRQDRETYGDKEGRAS*QPHFFQ Trigger: CTGAAAGAAATGGGGCTGCAAAGATGCTCTCCCCTC...TTTGTCCCCATAGGTTTCTCTGTCCTGTCTGGTGCCTCTCCAACCTGTACCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| 3UTR-3UTR CAA 90 bp | AGGCACCAGACAGGACAGAGAAACCTATGGGGACAAAGTGCCCAGATATGGGTGGATCAAATGGCAAGATaGTCCAGGTCGACCACCCCT | + |
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Preference number: 3 (lower is better) Translates to: RHQTGQRNLWGQSAQIWVDQMAR*SRSTTP Trigger: AGGGGTGGTCGACCTGGACAATCTTGCCATTTGATC...CACCCATATCTGGGCACTTTGTCCCCATAGGTTTCTCTGTCCTGTCTGGTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| 3UTR GCA 72 bp | AGGAGAGTGACCTCAAGCAAGAGGGGAGAGCATCTTTaGAGCCCCATTTCTTTCAGAACACCCTGCTCCTTG | + |
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Preference number: 3 (lower is better) Translates to: RRVTSSKRGEHL*SPISFRTPCSL Trigger: CAAGGAGCAGGGTGTTCTGAAAGAAATGGGGCTGCAAAGATGCTCTCCCCTCTTGCTTGAGGTCACTCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR GCA 90 bp | ACAGGAGCGATCCCACCCATCTCTCTGGGCCAAGCTGGGCTTGAGGGCTCTTCTCTTCGAGGCGCAGGGTaGAGGCACCACCCCCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: TGAIPPISLGQAGLEGSSLRGAG*RHHPRG Trigger: GCCCCGGGGGTGGTGCCTGCACCCTGCGCCTCGAAG...AGAAGAGCCCTCAAGCCCAGCTTGGCCCAGAGAGATGGGTGGGATCGCTCCTGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR CCA 90 bp | GTTGGGGACCAGGCCACTGACGCAGGCCAGCAGAACACAGGAGCAGGGCTGGGAGGGAGGCACGCACAATaGCCTCTCGAGTGTCCGACA | + |
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Preference number: 4 (lower is better) Translates to: VGDQATDAGQQNTGAGLGGRHAQ*PLECPT Trigger: TGTCGGACACTCGAGAGGCCATTGTGCGTGCCTCCC...TCCCAGCCCTGCTCCTGTGTTCTGCTGGCCTGCGTCAGTGGCCTGGTCCCCAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR GCA 90 bp | CTGAGGATTTCTGGGGGCACGGGAGATGCCATAGATGGACGGACGTACTGCTCCTGGCCCTGTGCCTGCTaGAGCAGCACCACGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: LRISGGTGDAIDGRTYCSWPCAC*SSTTLG Trigger: CCCCAGCGTGGTGCTGCTGCAGCAGGCACAGGGCCA...GGAGCAGTACGTCCGTCCATCTATGGCATCTCCCGTGCCCCCAGAAATCCTCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR TCA 90 bp | GTTGGGGACCAGGCCACTGACGCAGGCCAGCAGAACACAGGAGCAGGGCTGGGATTCTGGGCCACAATTTaGCCCAGGGTACACTCCATG | + |
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Preference number: 4 (lower is better) Translates to: VGDQATDAGQQNTGAGLGFWATI*PRVHSM Trigger: CATGGAGTGTACCCTGGGTCAAATTGTGGCCCAGAA...TCCCAGCCCTGCTCCTGTGTTCTGCTGGCCTGCGTCAGTGGCCTGGTCCCCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR TCA 90 bp | GTTGGGGACCAGGCCACTGACGCAGGCCAGCAGAACACAGGAGCAGGGCTGGGAAGATTTGCATATCTGTaGAGTCAGCGTTGCCCACCC | + |
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Preference number: 4 (lower is better) Translates to: VGDQATDAGQQNTGAGLGRFAYL*SQRCPP Trigger: GGGTGGGCAACGCTGACTTCACAGATATGCAAATCT...TCCCAGCCCTGCTCCTGTGTTCTGCTGGCCTGCGTCAGTGGCCTGGTCCCCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR GCA 90 bp | CAGGGAGGCCCAGAGCTGGGGGAGCTGCTAATTTCTGTCAAGCCACAAGGCCTATCCCACTGGGCCTGCTaGTCCTCCTCAAAGGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: QGGPELGELLISVKPQGLSHWAC*SSSKAF Trigger: GAAGGCCTTTGAGGAGGAGCAGCAGGCCCAGTGGGA...TAGGCCTTGTGGCTTGACAGAAATTAGCAGCTCCCCCAGCTCTGGGCCTCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR CCA 90 bp | CTGAGGATTTCTGGGGGCACGGGAGATGCCATAGATGGACGGACGTACTGCTCCGTCGGACTTGGTCAATaGGTCCCGGTCCAGCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: LRISGGTGDAIDGRTYCSVGLGQ*VPVQQV Trigger: CACCTGCTGGACCGGGACCCATTGACCAAGTCCGAC...GGAGCAGTACGTCCGTCCATCTATGGCATCTCCCGTGCCCCCAGAAATCCTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR TCA 90 bp | GGCAAGATTGTCCAGGTCGACCACCCCTTCACCACCCTTTCCATAGCTGAGCTGTGGGCTGGTAAGGGTTaGTGTGGTGGAGGGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GKIVQVDHPFTTLSIAELWAGKG*CGGGSS Trigger: GCTGCTCCCTCCACCACATCAACCCTTACCAGCCCA...CAGCTCAGCTATGGAAAGGGTGGTGAAGGGGTGGTCGACCTGGACAATCTTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR GCA 90 bp | GAGAGCATCTTTGCAGCCCCATTTCTTTCAGAACACCCTGCTCCTTGCCTGTTGAACGATGTCCCGGAGTaGAGGCTCGCCCCGTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: ESIFAAPFLSEHPAPCLLNDVPE*RLAPWG Trigger: TCCCCACGGGGCGAGCCTGCACTCCGGGACATCGTT...CAACAGGCAAGGAGCAGGGTGTTCTGAAAGAAATGGGGCTGCAAAGATGCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR CCA 90 bp | TCAGTTTCTGAGGATTTCTGGGGGCACGGGAGATGCCATAGATGGACGGACGTACGCTGGGGTCGGACTTaGTCAATGGGTCCCGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: SVSEDFWGHGRCHRWTDVRWGRT*SMGPGP Trigger: TGGACCGGGACCCATTGACCAAGTCCGACCCCAGCG...TACGTCCGTCCATCTATGGCATCTCCCGTGCCCCCAGAAATCCTCAGAAACTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR TCA 90 bp | CAGCCCCATTTCTTTCAGAACACCCTGCTCCTTGCCTGTTGGGTGCAGGGAGGCCTCGCAGCTGCAGAGTaGATTCAGGGACACCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: QPHFFQNTLLLACWVQGGLAAAE*IQGHLE Trigger: TTCAAGGTGTCCCTGAATTCACTCTGCAGCTGCGAG...GCCTCCCTGCACCCAACAGGCAAGGAGCAGGGTGTTCTGAAAGAAATGGGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR GCA 90 bp | CTGAGGATTTCTGGGGGCACGGGAGATGCCATAGATGGACGGACGTACTGCTCCACACAGGATGCAGGCTaGTCTTCACCACCTCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: LRISGGTGDAIDGRTYCSTQDAG*SSPPLF Trigger: GAACAGAGGTGGTGAAGAGCAGCCTGCATCCTGTGT...GGAGCAGTACGTCCGTCCATCTATGGCATCTCCCGTGCCCCCAGAAATCCTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR GCA 90 bp | CAGCCCCATTTCTTTCAGAACACCCTGCTCCTTGCCTGTTGGGTGCAGGGAGGCGTGTCTCCTCGCAGCTaGAGAGTGAATTCAGGGACA | + |
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Preference number: 4 (lower is better) Translates to: QPHFFQNTLLLACWVQGGVSPRS*RVNSGT Trigger: TGTCCCTGAATTCACTCTGCAGCTGCGAGGAGACAC...GCCTCCCTGCACCCAACAGGCAAGGAGCAGGGTGTTCTGAAAGAAATGGGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR GCA 90 bp | CAGGGAGGCCCAGAGCTGGGGGAGCTGCTAATTTCTGTCAAGCCACAAGGCCTATCCTCAAAGGCCTTCTaGATCTCTGCGAACGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: QGGPELGELLISVKPQGLSSKAF*ISANVV Trigger: CACCACGTTCGCAGAGATGCAGAAGGCCTTTGAGGA...TAGGCCTTGTGGCTTGACAGAAATTAGCAGCTCCCCCAGCTCTGGGCCTCCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR GCA 90 bp | TCAGTTTCTGAGGATTTCTGGGGGCACGGGAGATGCCATAGATGGACGGACGTAGTGGAGCTTCAGGTCTaGCAGGATCACCACCCCGGA | + |
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Preference number: 4 (lower is better) Translates to: SVSEDFWGHGRCHRWTDVVELQV*QDHHPG Trigger: TCCGGGGTGGTGATCCTGGCAGACCTGAAGCTCCAC...TACGTCCGTCCATCTATGGCATCTCCCGTGCCCCCAGAAATCCTCAGAAACTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR CCA 90 bp | CTGAGGATTTCTGGGGGCACGGGAGATGCCATAGATGGACGGACGTACTGCTCCTTCAACCACCTGCTTTaGCACCTCGGCCAACACACA | + |
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Preference number: 4 (lower is better) Translates to: LRISGGTGDAIDGRTYCSFNHLL*HLGQHT Trigger: TGTGTGTTGGCCGAGGTGCCAAAGCAGGTGGTTGAA...GGAGCAGTACGTCCGTCCATCTATGGCATCTCCCGTGCCCCCAGAAATCCTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR TCA 90 bp | CAGTTTCTGAGGATTTCTGGGGGCACGGGAGATGCCATAGATGGACGGACGTACAGGGGTCCGACTTGCTaGAGAGGTCCTTGTCATCCA | + |
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Preference number: 4 (lower is better) Translates to: QFLRISGGTGDAIDGRTYRGPTC*RGPCHP Trigger: TGGATGACAAGGACCTCTTCAGCAAGTCGGACCCCT...GTACGTCCGTCCATCTATGGCATCTCCCGTGCCCCCAGAAATCCTCAGAAACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR CCA 90 bp | GAGAGCATCTTTGCAGCCCCATTTCTTTCAGAACACCCTGCTCCTTGCCTGTTGGCAGCAGCACCACGCTaGGGTCGGACTTGGTCAATG | + |
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Preference number: 4 (lower is better) Translates to: ESIFAAPFLSEHPAPCLLAAAPR*GRTWSM Trigger: CATTGACCAAGTCCGACCCCAGCGTGGTGCTGCTGC...CAACAGGCAAGGAGCAGGGTGTTCTGAAAGAAATGGGGCTGCAAAGATGCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR CCA 90 bp | GAGGCACCAGACAGGACAGAGAAACCTATGGGGACAAAGTGCCCAGATATGGGTGCCTCCACCACGCCCTaGATTCCTTCACACTCATCG | + |
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Preference number: 4 (lower is better) Translates to: EAPDRTEKPMGTKCPDMGASTTP*IPSHSS Trigger: CGATGAGTGTGAAGGAATCCAGGGCGTGGTGGAGGC...ACCCATATCTGGGCACTTTGTCCCCATAGGTTTCTCTGTCCTGTCTGGTGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR TCA 90 bp | CACCAGACAGGACAGAGAAACCTATGGGGACAAAGTGCCCAGATATGGGTGTCCCCTCTGCTATCACCGTaGTGGTGGACTTGCCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: HQTGQRNLWGQSAQIWVSPLLSP*WWTCQH Trigger: ATGCTGGCAAGTCCACCATCACGGTGATAGCAGAGG...GGACACCCATATCTGGGCACTTTGTCCCCATAGGTTTCTCTGTCCTGTCTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR CCA 90 bp | ATGGGTGTCCTCAAGGCTTGGGGTACTTCCTCTCTCCACACGATCAAATGGCAATTCACACAGTCCCACTaGGCCTGCTGCTCCTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: MGVLKAWGTSSLHTIKWQFTQSH*ACCSSS Trigger: TGAGGAGGAGCAGCAGGCCCAGTGGGACTGTGTGAA...TTGCCATTTGATCGTGTGGAGAGAGGAAGTACCCCAAGCCTTGAGGACACCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR CCA 90 bp | CACCAGACAGGACAGAGAAACCTATGGGGACAAAGTGCCCAGATATGGGTGTCCATGGCTACCGTACAGTaGATCTGGCAGCCACCCATG | + |
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Preference number: 4 (lower is better) Translates to: HQTGQRNLWGQSAQIWVSMATVQ*IWQPPM Trigger: CATGGGTGGCTGCCAGATCCACTGTACGGTAGCCAT...GGACACCCATATCTGGGCACTTTGTCCCCATAGGTTTCTCTGTCCTGTCTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR TCA 90 bp | ATTGTCCAGGTCGACCACCCCTTCACCACCCTTTCCATAGCTGAGCTGCCAGGAAGTAGTAGTCGACAGTaGAGACCTTGGAGAACACAG | + |
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Preference number: 4 (lower is better) Translates to: IVQVDHPFTTLSIAELPGSSSRQ*RPWRTQ Trigger: CTGTGTTCTCCAAGGTCTTCACTGTCGACTACTACT...TCCTGGCAGCTCAGCTATGGAAAGGGTGGTGAAGGGGTGGTCGACCTGGACAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR CCA 90 bp | CTCAAGGCTTGGGGTACTTCCTCTCTCCACACGATCAAATGGCAAGATTGTCCAGGGACACCTCATACTTaGGAGGGATCCGGGCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: LKAWGTSSLHTIKWQDCPGTPHT*EGSGLQ Trigger: TTGGAGCCCGGATCCCTCCCAAGTATGAGGTGTCCC...TGGACAATCTTGCCATTTGATCGTGTGGAGAGAGGAAGTACCCCAAGCCTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| 3UTR CAA 72 bp | CAGGAGAGTGACCTCAAGCAAGAGGGGAGAGCATCTTaGCAGCCCCATTTCTTTCAGAACACCCTGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: QESDLKQEGRAS*QPHFFQNTLLL Trigger: AAGGAGCAGGGTGTTCTGAAAGAAATGGGGCTGCAAAGATGCTCTCCCCTCTTGCTTGAGGTCACTCTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR TCA 90 bp | GAGAGCATCTTTGCAGCCCCATTTCTTTCAGAACACCCTGCTCCTTGCCTGTTGAATTCAGGGACACCTTaGAGGGTTCCCACACTGGGT | + |
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Preference number: 4 (lower is better) Translates to: ESIFAAPFLSEHPAPCLLNSGTP*RVPTLG Trigger: ACCCAGTGTGGGAACCCTTCAAGGTGTCCCTGAATT...CAACAGGCAAGGAGCAGGGTGTTCTGAAAGAAATGGGGCTGCAAAGATGCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR GCA 90 bp | GCTATGATTGACAGGAGAGTGACCTCAAGCAAGAGGGGAGAGCATCTTTGCAGCCCAGGGTACACTCCATaGCCCCTAGGAAGTCATCAT | + |
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Preference number: 4 (lower is better) Translates to: AMIDRRVTSSKRGEHLCSPGYTP*PLGSHH Trigger: ATGATGACTTCCTAGGGGGCATGGAGTGTACCCTGG...GCTGCAAAGATGCTCTCCCCTCTTGCTTGAGGTCACTCTCCTGTCAATCATAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR CCA 90 bp | CTCAAGGCTTGGGGTACTTCCTCTCTCCACACGATCAAATGGCAAGATTGTCCAAGGAAGTCATCATCCTaGCAAGTCAGCCCACTAGGC | + |
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Preference number: 4 (lower is better) Translates to: LKAWGTSSLHTIKWQDCPRKSSS*QVSPLG Trigger: GCCTAGTGGGCTGACTTGCCAGGATGATGACTTCCT...TGGACAATCTTGCCATTTGATCGTGTGGAGAGAGGAAGTACCCCAAGCCTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR CCA 90 bp | AGAGGCACCAGACAGGACAGAGAAACCTATGGGGACAAAGTGCCCAGATATGGGTTGATGGCAAAGTCGTaGGACACCTCATACTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: RGTRQDRETYGDKVPRYGLMAKS*DTSYLG Trigger: TCCCAAGTATGAGGTGTCCCACGACTTTGCCATCAA...CCCATATCTGGGCACTTTGTCCCCATAGGTTTCTCTGTCCTGTCTGGTGCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR CCA 90 bp | AGAGGCACCAGACAGGACAGAGAAACCTATGGGGACAAAGTGCCCAGATATGGGGAAGGGTTCCCACACTaGGTTAAGATTGTTCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: RGTRQDRETYGDKVPRYGEGFPH*VKIVLH Trigger: GTGAAGAACAATCTTAACCCAGTGTGGGAACCCTTC...CCCATATCTGGGCACTTTGTCCCCATAGGTTTCTCTGTCCTGTCTGGTGCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR GCA 90 bp | ACCTCAAGCAAGAGGGGAGAGCATCTTTGCAGCCCCATTTCTTTCAGAACACCCTCCCCGTCTAAGATTTaGATATCTGTGAAGTCAGCG | + |
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Preference number: 4 (lower is better) Translates to: TSSKRGEHLCSPISFRTPSPSKI*ISVKSA Trigger: CGCTGACTTCACAGATATGCAAATCTTAGACGGGGA...GGGTGTTCTGAAAGAAATGGGGCTGCAAAGATGCTCTCCCCTCTTGCTTGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS GCA 90 bp | CAGGTGCCGGCAGCTCAGCCGCAGCTCCACCTTCGAGGCGCAGGGTaGAGGCACCACCCCCGGGGCCACCGCGCGCTCCGAGTCGCCGCT | + |
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Preference number: 5 (lower is better) Translates to: QVPAAQPQLHLRGAG*RHHPRGHRALRVAA Trigger: AGCGGCGACTCGGAGCGCGCGGTGGCCCCGGGGGTGGTGCCTGCACCCTGCGCCTCGAAGGTGGAGCTGCGGCTGAGCTGCCGGCACCTG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR CAA 90 bp | GGCCCCGCAGGCTCCAGGTGTGGGTACAGGTTGGAGAGGCACCAGACAGGACAGTGGGACACCTCATACTaGGGAGGGATCCGGGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: GPAGSRCGYRLERHQTGQWDTSY*GGIRAP Trigger: TGGAGCCCGGATCCCTCCCAAGTATGAGGTGTCCCA...CTGTCCTGTCTGGTGCCTCTCCAACCTGTACCCACACCTGGAGCCTGCGGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS GCA 90 bp | TTCACCACCTCTGTTCTGTCCACCTGTAGCCACTGGCCCTGTGCCTaGTGCAGCAGCACCACGCTGGGGTCGGACTTGGTCAATGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: FTTSVLSTCSHWPCA*CSSTTLGSDLVNGS Trigger: GGACCCATTGACCAAGTCCGACCCCAGCGTGGTGCTGCTGCAGCAGGCACAGGGCCAGTGGCTACAGGTGGACAGAACAGAGGTGGTGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR CAA 90 bp | ATTGTCCAGGTCGACCACCCCTTCACCACCCTTTCCATAGCTGAGCTGCCAGGAACGCTGGGGTCGGACTaGGTCAATGGGTCCCGGTCC | + |
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Preference number: 5 (lower is better) Translates to: IVQVDHPFTTLSIAELPGTLGSD*VNGSRS Trigger: GGACCGGGACCCATTGACCAAGTCCGACCCCAGCGT...TCCTGGCAGCTCAGCTATGGAAAGGGTGGTGAAGGGGTGGTCGACCTGGACAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR CAA 90 bp | CCCCGCAGGCTCCAGGTGTGGGTACAGGTTGGAGAGGCACCAGACAGGACAGAGACCGTGATGGTGGACTaGCCAGCATTCCTGCCGAAT | + |
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Preference number: 5 (lower is better) Translates to: PRRLQVWVQVGEAPDRTETVMVD*PAFLPN Trigger: ATTCGGCAGGAATGCTGGCAAGTCCACCATCACGGT...CTCTGTCCTGTCTGGTGCCTCTCCAACCTGTACCCACACCTGGAGCCTGCGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS CCA 90 bp | CCCCCTAGGAAGTCATCATCCTGGCAAGTCAGCCCACTAGGCCCGTaGGTGTCATACACCTCAAACCGTAGCTTCTGCACCCCCTCGAAG | + |
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Preference number: 5 (lower is better) Translates to: PPRKSSSWQVSPLGP*VSYTSNRSFCTPSK Trigger: CTTCGAGGGGGTGCAGAAGCTACGGTTTGAGGTGTATGACACCCACGGGCCTAGTGGGCTGACTTGCCAGGATGATGACTTCCTAGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR CAA 90 bp | AGGCACCAGACAGGACAGAGAAACCTATGGGGACAAAGTGCCCAGATATGGGTGTCGGCCAACACACACTaGGCCAGTGCTGCGGGGGAT | + |
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Preference number: 5 (lower is better) Translates to: RHQTGQRNLWGQSAQIWVSANTH*ASAAGD Trigger: ATCCCCCGCAGCACTGGCCAAGTGTGTGTTGGCCGA...CACCCATATCTGGGCACTTTGTCCCCATAGGTTTCTCTGTCCTGTCTGGTGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS CCA 90 bp | TGTAGTATTCAACCACCTGCTTTGGCACCTCGGCCAACACACACTTaGCCAGTGCTGCGGGGGATGCGTTCTTTAGCTCACGGAAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: CSIQPPALAPRPTHT*PVLRGMRSLAHGRA Trigger: TGCCCTTCCGTGAGCTAAAGAACGCATCCCCCGCAGCACTGGCCAAGTGTGTGTTGGCCGAGGTGCCAAAGCAGGTGGTTGAATACTACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR CAA 90 bp | GGCAAGATTGTCCAGGTCGACCACCCCTTCACCACCCTTTCCATAGCTGAGCTGTTGCTGAAGAGGTCCTaGTCATCCAGTTTCCGGGCC | + |
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Preference number: 5 (lower is better) Translates to: GKIVQVDHPFTTLSIAELLLKRS*SSSFRA Trigger: GGCCCGGAAACTGGATGACAAGGACCTCTTCAGCAA...CAGCTCAGCTATGGAAAGGGTGGTGAAGGGGTGGTCGACCTGGACAATCTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR CAA 90 bp | CAGGTTGGAGAGGCACCAGACAGGACAGAGAAACCTATGGGGACAAAGTGCCCATTCCTCGGGTCACCGTaGGAGGCTGTGAAGTCGATG | + |
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Preference number: 5 (lower is better) Translates to: QVGEAPDRTEKPMGTKCPFLGSP*EAVKSM Trigger: CATCGACTTCACAGCCTCCAACGGTGACCCGAGGAA...TGGGCACTTTGTCCCCATAGGTTTCTCTGTCCTGTCTGGTGCCTCTCCAACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS TCA 90 bp | CCAGACCAGGCACTTCAGAGGCCGTGTCTCCTCGCAGCTGCAGAGTaGATTCAGGGACACCTTGAAGGGTTCCCACACTGGGTTAAGATT | + |
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Preference number: 5 (lower is better) Translates to: PDQALQRPCLLAAAE*IQGHLEGFPHWVKI Trigger: AATCTTAACCCAGTGTGGGAACCCTTCAAGGTGTCCCTGAATTCACTCTGCAGCTGCGAGGAGACACGGCCTCTGAAGTGCCTGGTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR CAA 90 bp | CAGTTTCTGAGGATTTCTGGGGGCACGGGAGATGCCATAGATGGACGGACGTACAGGAAGGGGTCCGACTaGCTGAAGAGGTCCTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: QFLRISGGTGDAIDGRTYRKGSD*LKRSLS Trigger: TGACAAGGACCTCTTCAGCAAGTCGGACCCCTTCCT...GTACGTCCGTCCATCTATGGCATCTCCCGTGCCCCCAGAAATCCTCAGAAACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS CCA 90 bp | CGTGATGGTGGACTTGCCAGCATTCCTGCCGAATCGCAACAGCAATaGCCGTGTCATCTTCTTCTGGGCCACAATTTGACCCAGGGTACA | + |
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Preference number: 5 (lower is better) Translates to: RDGGLASIPAESQQQ*PCHLLLGHNLTQGT Trigger: TGTACCCTGGGTCAAATTGTGGCCCAGAAGAAGATGACACGGCCATTGCTGTTGCGATTCGGCAGGAATGCTGGCAAGTCCACCATCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR CAA 90 bp | GCCCAGATATGGGTGTCCTCAAGGCTTGGGGTACTTCCTCTCTCCACACGATCATCGACAGTGAAGACCTaGGAGAACACAGGATGCAGG | + |
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Preference number: 5 (lower is better) Translates to: AQIWVSSRLGVLPLSTRSSTVKT*ENTGCR Trigger: CCTGCATCCTGTGTTCTCCAAGGTCTTCACTGTCGA...TGATCGTGTGGAGAGAGGAAGTACCCCAAGCCTTGAGGACACCCATATCTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR CAA 90 bp | GGCAAGATTGTCCAGGTCGACCACCCCTTCACCACCCTTTCCATAGCTGAGCTGTCCTCAGGGTTGAAATaGATGGCAAAGTCGTGGGAC | + |
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Preference number: 5 (lower is better) Translates to: GKIVQVDHPFTTLSIAELSSGLK*MAKSWD Trigger: GTCCCACGACTTTGCCATCAATTTCAACCCTGAGGA...CAGCTCAGCTATGGAAAGGGTGGTGAAGGGGTGGTCGACCTGGACAATCTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR CAA 90 bp | GGGTACAGGTTGGAGAGGCACCAGACAGGACAGAGAAACCTATGGGGACAAAGTATTCAACCACCTGCTTaGGCACCTCGGCCAACACAC | + |
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Preference number: 5 (lower is better) Translates to: GYRLERHQTGQRNLWGQSIQPPA*APRPTH Trigger: GTGTGTTGGCCGAGGTGCCAAAGCAGGTGGTTGAAT...ACTTTGTCCCCATAGGTTTCTCTGTCCTGTCTGGTGCCTCTCCAACCTGTACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS TCA 90 bp | CAATGGCCTCTCGAGTGTCCGACATATCCGTCACCACACCGTCCGTaGGGATCAGCAGTATGTAATATTGAGAAGCCTCTCCTGTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: QWPLECPTYPSPHRP*GSAVCNIEKPLLCS Trigger: AGAGCACAGGAGAGGCTTCTCAATATTACATACTGCTGATCCTCACGGACGGTGTGGTGACGGATATGTCGGACACTCGAGAGGCCATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS GCA 90 bp | ACTGGGTTAAGATTGTTCTTCACTACCTCTGTCCTGTACACGAGCTaGTCACTCCCGTCGTCATTAACCCGATACAGCTCTAGGAAGGGG | + |
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Preference number: 5 (lower is better) Translates to: TGLRLFFTTSVLYTS*SLPSSLTRYSSRKG Trigger: CCCCTTCCTAGAGCTGTATCGGGTTAATGACGACGGGAGTGAGCAGCTCGTGTACAGGACAGAGGTAGTGAAGAACAATCTTAACCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR CAA 90 bp | CAGTTTCTGAGGATTTCTGGGGGCACGGGAGATGCCATAGATGGACGGACGTACCAGCAGTATGTAATATaGAGAAGCCTCTCCTGTGCT | + |
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Preference number: 5 (lower is better) Translates to: QFLRISGGTGDAIDGRTYQQYVI*RSLSCA Trigger: AGCACAGGAGAGGCTTCTCAATATTACATACTGCTG...GTACGTCCGTCCATCTATGGCATCTCCCGTGCCCCCAGAAATCCTCAGAAACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR CAA 90 bp | AGGCACCAGACAGGACAGAGAAACCTATGGGGACAAAGTGCCCAGATATGGGTGCACACTGGGTTAAGATaGTTCTTCACTACCTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: RHQTGQRNLWGQSAQIWVHTGLR*FFTTSV Trigger: GACAGAGGTAGTGAAGAACAATCTTAACCCAGTGTG...CACCCATATCTGGGCACTTTGTCCCCATAGGTTTCTCTGTCCTGTCTGGTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR CAA 90 bp | AGGCACCAGACAGGACAGAGAAACCTATGGGGACAAAGTGCCCAGATATGGGTGTTCTTCTGTTTGTACTaGGCATTCACACAGTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: RHQTGQRNLWGQSAQIWVFFCLY*AFTQSH Trigger: GTGGGACTGTGTGAATGCCAAGTACAAACAGAAGAA...CACCCATATCTGGGCACTTTGTCCCCATAGGTTTCTCTGTCCTGTCTGGTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR CAA 90 bp | GAGAGCATCTTTGCAGCCCCATTTCTTTCAGAACACCCTGCTCCTTGCCTGTTGTCATCGTCCTCAGGGTaGAAATTGATGGCAAAGTCG | + |
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Preference number: 5 (lower is better) Translates to: ESIFAAPFLSEHPAPCLLSSSSG*KLMAKS Trigger: CGACTTTGCCATCAATTTCAACCCTGAGGACGATGA...CAACAGGCAAGGAGCAGGGTGTTCTGAAAGAAATGGGGCTGCAAAGATGCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS-3UTR CAA 90 bp | GCTATGATTGACAGGAGAGTGACCTCAAGCAAGAGGGGAGAGCATCTTTGCAGCTTGCGCTTCTTCTGTTaGTACTTGGCATTCACACAG | + |
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Preference number: 5 (lower is better) Translates to: AMIDRRVTSSKRGEHLCSLRFFC*YLAFTQ Trigger: CTGTGTGAATGCCAAGTACAAACAGAAGAAGCGCAA...GCTGCAAAGATGCTCTCCCCTCTTGCTTGAGGTCACTCTCCTGTCAATCATAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS GCA 72 bp | TCTGTTCTGTCCACCTGTAGCCACTGGCCCTGTGCCTaGTGCAGCAGCACCACGCTGGGGTCGGACTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: SVLSTCSHWPCA*CSSTTLGSDLV Trigger: GACCAAGTCCGACCCCAGCGTGGTGCTGCTGCAGCAGGCACAGGGCCAGTGGCTACAGGTGGACAGAACAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS CCA 72 bp | CAACCACCTGCTTTGGCACCTCGGCCAACACACACTTaGCCAGTGCTGCGGGGGATGCGTTCTTTAGCTCAC | + |
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Preference number: 6 (lower is better) Translates to: QPPALAPRPTHT*PVLRGMRSLAH Trigger: GTGAGCTAAAGAACGCATCCCCCGCAGCACTGGCCAAGTGTGTGTTGGCCGAGGTGCCAAAGCAGGTGGTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS CAA 72 bp | TCAACCACCTGCTTTGGCACCTCGGCCAACACACACTaGGCCAGTGCTGCGGGGGATGCGTTCTTTAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: STTCFGTSANTH*ASAAGDAFFSS Trigger: TGAGCTAAAGAACGCATCCCCCGCAGCACTGGCCAAGTGTGTGTTGGCCGAGGTGCCAAAGCAGGTGGTTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS CAA 90 bp | CTCCCGTCGTCATTAACCCGATACAGCTCTAGGAAGGGGTCCGACTaGCTGAAGAGGTCCTTGTCATCCAGTTTCCGGGCCTGGAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LPSSLTRYSSRKGSD*LKRSLSSSFRAWKE Trigger: CTCCTTCCAGGCCCGGAAACTGGATGACAAGGACCTCTTCAGCAAGTCGGACCCCTTCCTAGAGCTGTATCGGGTTAATGACGACGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS GCA 72 bp | GTCATAATCCTGGCAGACCTCGCCCACTGCCACCAATaGCCTCAGGTACTCGTTGGGCTGGTAAGGGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: VIILADLAHCHQ*PQVLVGLVRVD Trigger: ATCAACCCTTACCAGCCCAACGAGTACCTGAGGGCATTGGTGGCAGTGGGCGAGGTCTGCCAGGATTATGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS CCA 72 bp | AAGTCATCATCCTGGCAAGTCAGCCCACTAGGCCCGTaGGTGTCATACACCTCAAACCGTAGCTTCTGCACC | + |
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Preference number: 6 (lower is better) Translates to: KSSSWQVSPLGP*VSYTSNRSFCT Trigger: GGTGCAGAAGCTACGGTTTGAGGTGTATGACACCCACGGGCCTAGTGGGCTGACTTGCCAGGATGATGACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS CAA 90 bp | ACCACGCCCTGGATTCCTTCACACTCATCGTCCTCAGGGTTGAAATaGATGGCAAAGTCGTGGGACACCTCATACTTGGGAGGGATCCGG | + |
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Preference number: 6 (lower is better) Translates to: TTPWIPSHSSSSGLK*MAKSWDTSYLGGIR Trigger: CCGGATCCCTCCCAAGTATGAGGTGTCCCACGACTTTGCCATCAATTTCAACCCTGAGGACGATGAGTGTGAAGGAATCCAGGGCGTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS TCA 72 bp | GTAGCTTCTGCACCCCCTCGAAGTAGTAGTCGACAGTaGAGACCTTGGAGAACACAGGATGCAGGCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: VASAPPRSSSRQ*RPWRTQDAGCS Trigger: AGAGCAGCCTGCATCCTGTGTTCTCCAAGGTCTTCACTGTCGACTACTACTTCGAGGGGGTGCAGAAGCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS CCA 72 bp | GGACTTGCCAGCATTCCTGCCGAATCGCAACAGCAATaGCCGTGTCATCTTCTTCTGGGCCACAATTTGACC | + |
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Preference number: 6 (lower is better) Translates to: GLASIPAESQQQ*PCHLLLGHNLT Trigger: GGTCAAATTGTGGCCCAGAAGAAGATGACACGGCCATTGCTGTTGCGATTCGGCAGGAATGCTGGCAAGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS CAA 72 bp | TCATTAACCCGATACAGCTCTAGGAAGGGGTCCGACTaGCTGAAGAGGTCCTTGTCATCCAGTTTCCGGGCC | + |
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Preference number: 6 (lower is better) Translates to: SLTRYSSRKGSD*LKRSLSSSFRA Trigger: GGCCCGGAAACTGGATGACAAGGACCTCTTCAGCAAGTCGGACCCCTTCCTAGAGCTGTATCGGGTTAATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS TCA 72 bp | CTCGAGTGTCCGACATATCCGTCACCACACCGTCCGTaGGGATCAGCAGTATGTAATATTGAGAAGCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: LECPTYPSPHRP*GSAVCNIEKPL Trigger: GAGAGGCTTCTCAATATTACATACTGCTGATCCTCACGGACGGTGTGGTGACGGATATGTCGGACACTCGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS CAA 72 bp | AGGGACACCTTGAAGGGTTCCCACACTGGGTTAAGATaGTTCTTCACTACCTCTGTCCTGTACACGAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: RDTLKGSHTGLR*FFTTSVLYTSC Trigger: GCAGCTCGTGTACAGGACAGAGGTAGTGAAGAACAATCTTAACCCAGTGTGGGAACCCTTCAAGGTGTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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| CDS CAA 72 bp | GTCTCCTCGCAGCTGCAGAGTGAATTCAGGGACACCTaGAAGGGTTCCCACACTGGGTTAAGATTGTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: VSSQLQSEFRDT*KGSHTGLRLFF Trigger: GAAGAACAATCTTAACCCAGTGTGGGAACCCTTCAAGGTGTCCCTGAATTCACTCTGCAGCTGCGAGGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037900.9 |
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