Pregenerated sensors for CPNE5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024008Ensembl transcript IDs: ENSMUST00000024805.15, ENSMUST00000137727.3
Found 187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGGTGGGCTGGGTGGGTTCCTGCTGGATGTGGCTAGGGACAGGTTaGCATTCAGGGATCCCTGTCTCTTGTCCCCTAGCCACTGAAGGG | + |
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Preference number: 1 (lower is better) Translates to: RVGWVGSCWMWLGTG*HSGIPVSCPLATEG Trigger: CCCTTCAGTGGCTAGGGGACAAGAGACAGGGATCCCTGAATGCCAACCTGTCCCTAGCCACATCCAGCAGGAACCCACCCAGCCCACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR TCA 90 bp | GTGTGGGGGCTAACCCTGTGCCCTGCAGGTGAGTGGCCCCCAAGTTaGGCAGGAGACATCTCAGTGCTACAAGCTACCTGTGATAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: VWGLTLCPAGEWPPS*AGDISVLQATCDSS Trigger: GGAGCTATCACAGGTAGCTTGTAGCACTGAGATGTCTCCTGCTCAACTTGGGGGCCACTCACCTGCAGGGCACAGGGTTAGCCCCCACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR CCA 90 bp | GGAGTCCCTAAGAGGGTCACATGCATCCCTGGTAGTCTACCAGTCTaGGGTTCCCTGGAAACAGGACAGGGGATCTCATGGGACTGGGGA | + |
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Preference number: 1 (lower is better) Translates to: GVPKRVTCIPGSLPV*GSLETGQGISWDWG Trigger: TCCCCAGTCCCATGAGATCCCCTGTCCTGTTTCCAGGGAACCCCAGACTGGTAGACTACCAGGGATGCATGTGACCCTCTTAGGGACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR CCA 90 bp | GTGAATGGTGGCCATGAGGAAGGTGTGGGGAGGCTGTGTGTGGAATaGATGTACCCTCAGGATGGCTCAGGAAACGCTGGACCACCTGAC | + |
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Preference number: 1 (lower is better) Translates to: VNGGHEEGVGRLCVE*MYPQDGSGNAGPPD Trigger: GTCAGGTGGTCCAGCGTTTCCTGAGCCATCCTGAGGGTACATCCATTCCACACACAGCCTCCCCACACCTTCCTCATGGCCACCATTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR CCA 90 bp | GACCAGACAGTCAAAACATCACTATCACCATGCGGGACAGGCAGGTaGGATGGGAGATGCCAGGTGGAGACCCCATGCGGCATAAGGGAC | + |
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Preference number: 1 (lower is better) Translates to: DQTVKTSLSPCGTGR*DGRCQVETPCGIRD Trigger: GTCCCTTATGCCGCATGGGGTCTCCACCTGGCATCTCCCATCCCACCTGCCTGTCCCGCATGGTGATAGTGATGTTTTGACTGTCTGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR TCA 90 bp | GGACCGGGAAGGGGCTCTAGGCAACCATGCCTCCATCACAGTCCCTaGTGGCTCACAGACTCTGCTTACATATGTTTGTGGGTGGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: GPGRGSRQPCLHHSP*WLTDSAYICLWVVG Trigger: ACCCACCACCCACAAACATATGTAAGCAGAGTCTGTGAGCCATCAGGGACTGTGATGGAGGCATGGTTGCCTAGAGCCCCTTCCCGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR GCA 90 bp | AAAACATCACTATCACCATGCGGGACAGGCAGGTGGGATGGGAGATaGCAGGTGGAGACCCCATGCGGCATAAGGGACACATGCAAGACC | + |
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Preference number: 1 (lower is better) Translates to: KTSLSPCGTGRWDGR*QVETPCGIRDTCKT Trigger: GGTCTTGCATGTGTCCCTTATGCCGCATGGGGTCTCCACCTGGCATCTCCCATCCCACCTGCCTGTCCCGCATGGTGATAGTGATGTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR GCA 90 bp | ACTACCCTGGGGTCCTTAGAGTCCTGGAGAACGCTTCATCTGCCTTaGCCGTCCCTGTCTACCTCCTTTAGCTCTGTTCCACACACCCTC | + |
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Preference number: 1 (lower is better) Translates to: TTLGSLESWRTLHLP*PSLSTSFSSVPHTL Trigger: GAGGGTGTGTGGAACAGAGCTAAAGGAGGTAGACAGGGACGGGCAAGGCAGATGAAGCGTTCTCCAGGACTCTAAGGACCCCAGGGTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR CCA 90 bp | GACAGTCAAAACATCACTATCACCATGCGGGACAGGCAGGTGGGATaGGAGATGCCAGGTGGAGACCCCATGCGGCATAAGGGACACATG | + |
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Preference number: 1 (lower is better) Translates to: DSQNITITMRDRQVG*EMPGGDPMRHKGHM Trigger: CATGTGTCCCTTATGCCGCATGGGGTCTCCACCTGGCATCTCCCATCCCACCTGCCTGTCCCGCATGGTGATAGTGATGTTTTGACTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR GCA 90 bp | TCTAGAGCAAACGTCAGATGCCTTGCCATGAACCACAAGGCCCTGTaGATTTTGGCCTCCACCCTGACCCCATCGCCTGCATTCTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: SRANVRCLAMNHKAL*ILASTLTPSPAFSS Trigger: GGAAGAGAATGCAGGCGATGGGGTCAGGGTGGAGGCCAAAATGCACAGGGCCTTGTGGTTCATGGCAAGGCATCTGACGTTTGCTCTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR CCA 90 bp | ACTGAGCCCCGCCCTGTCTTCTGTGGGTGGTTTCTTTTTCTAAGGTaGGTGGGAAGAGCCTCTTTCAAGGCCAGCTCCTTCTCACAAGGG | + |
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Preference number: 1 (lower is better) Translates to: TEPRPVFCGWFLFLR*VGRASFKASSFSQG Trigger: CCCTTGTGAGAAGGAGCTGGCCTTGAAAGAGGCTCTTCCCACCCACCTTAGAAAAAGAAACCACCCACAGAAGACAGGGCGGGGCTCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR CCA 90 bp | CCAGAGTGTCTCTTAGTGCCACCACTCCCATCCCTTCAAGCTGGCTaGCATTGCTACTTTGTGGTGGCTGATTTAGCCCAGAGGGAGACA | + |
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Preference number: 1 (lower is better) Translates to: PECLLVPPLPSLQAG*HCYFVVADLAQRET Trigger: TGTCTCCCTCTGGGCTAAATCAGCCACCACAAAGTAGCAATGCCAGCCAGCTTGAAGGGATGGGAGTGGTGGCACTAAGAGACACTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR CCA 90 bp | ATGGGACTGGGGACACTAGACACTAGGGTAGGAGGAGACAGGAGCTaGAAGAGGCCCAGCTGGGTTGCAAGAATAAGAAAGTCTTGGAGT | + |
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Preference number: 1 (lower is better) Translates to: MGLGTLDTRVGGDRS*KRPSWVARIRKSWS Trigger: ACTCCAAGACTTTCTTATTCTTGCAACCCAGCTGGGCCTCTTCCAGCTCCTGTCTCCTCCTACCCTAGTGTCTAGTGTCCCCAGTCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR TCA 90 bp | GTCTGCTCTCATTCTCTCCCCTTGCTCCTGCCTCTTAACACTGTCTaGAGCCAGACTATAGACCTGAGTGTGTGTGTGTGCTCACTGTCT | + |
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Preference number: 1 (lower is better) Translates to: VCSHSLPLLLPLNTV*SQTIDLSVCVCSLS Trigger: AGACAGTGAGCACACACACACACTCAGGTCTATAGTCTGGCTTCAGACAGTGTTAAGAGGCAGGAGCAAGGGGAGAGAATGAGAGCAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR CCA 90 bp | CTGGGGACTGAGCCAAGTGCCTCTGACCTCTGCACAGGCCTGGAATaGATTCTCAGTAGATGTTTGTTGAGAGATGAAGAAACCATGATC | + |
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Preference number: 1 (lower is better) Translates to: LGTEPSASDLCTGLE*ILSRCLLRDEETMI Trigger: GATCATGGTTTCTTCATCTCTCAACAAACATCTACTGAGAATCCATTCCAGGCCTGTGCAGAGGTCAGAGGCACTTGGCTCAGTCCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR GCA 90 bp | AAAAACCTCAGGGACTATTGTGTTGAATCAAGTCAAGCTATTCTCTaGTCTATAGAACTTGCCAGAGCCTTGGGAGCCCCAGAGGCCACT | + |
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Preference number: 1 (lower is better) Translates to: KNLRDYCVESSQAIL*SIELARALGAPEAT Trigger: AGTGGCCTCTGGGGCTCCCAAGGCTCTGGCAAGTTCTATAGAGCAGAGAATAGCTTGACTTGATTCAACACAATAGTCCCTGAGGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR CCA 90 bp | GCTCTAATTTACCATGAAGTCATCAGAAGTAAACAAGCCCCGAGCTaGAGGGTAATTGGTACCGAATTCCTCTTGGGTACAGCCTCAGAA | + |
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Preference number: 1 (lower is better) Translates to: ALIYHEVIRSKQAPS*RVIGTEFLLGTASE Trigger: TTCTGAGGCTGTACCCAAGAGGAATTCGGTACCAATTACCCTCCAGCTCGGGGCTTGTTTACTTCTGATGACTTCATGGTAAATTAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR-3UTR TCA 90 bp | CTCAGGGGCAGCGGCTCGCTGTCTGGACTCCCCTGCTGGGTACCCATCTCCTCCCATGTGCCCGGCAGGTaGGTGGCTTCCGAGTTGAGC | + |
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Preference number: 2 (lower is better) Translates to: LRGSGSLSGLPCWVPISSHVPGR*VASELS Trigger: GCTCAACTCGGAAGCCACTCACCTGCCGGGCACATG...GGAGGAGATGGGTACCCAGCAGGGGAGTCCAGACAGCGAGCCGCTGCCCCTGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR-3UTR CCA 90 bp | CTCAGGGGCAGCGGCTCGCTGTCTGGACTCCCCTGCTGGGTACCCATCTCCTCCGACAGGCAGGTGGGATaGGAGATGCCAGGTGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: LRGSGSLSGLPCWVPISSDRQVG*EMPGGD Trigger: GTCTCCACCTGGCATCTCCCATCCCACCTGCCTGTC...GGAGGAGATGGGTACCCAGCAGGGGAGTCCAGACAGCGAGCCGCTGCCCCTGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR-3UTR TCA 90 bp | GCCTCTGAGGACCGGGAAGGGGCTCTAGGCAACCATGCCTCCATCACAGTCCCTCAGGGACAGGAGCTTTaGAGGGCTGAGGCATGGGGG | + |
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Preference number: 2 (lower is better) Translates to: ASEDREGALGNHASITVPQGQEL*RAEAWG Trigger: CCCCCATGCCTCAGCCCTTCAAAGCTCCTGTCCCTG...AGGGACTGTGATGGAGGCATGGTTGCCTAGAGCCCCTTCCCGGTCCTCAGAGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR-3UTR CCA 90 bp | CCTCAGGGGCAGCGGCTCGCTGTCTGGACTCCCCTGCTGGGTACCCATCTCCTCCAGTCTGGGGTTCCCTaGAAACAGGACAGGGGATCT | + |
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Preference number: 2 (lower is better) Translates to: PQGQRLAVWTPLLGTHLLQSGVP*KQDRGS Trigger: AGATCCCCTGTCCTGTTTCCAGGGAACCCCAGACTG...GAGGAGATGGGTACCCAGCAGGGGAGTCCAGACAGCGAGCCGCTGCCCCTGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR-3UTR GCA 90 bp | CTGCCTAGAGGGCTGATGGGACAGCGTGCGCAGTATGTGCTGTGCGCATGCGCGCAGGTGGAGACCCCATaGGGCATAAGGGACACATGC | + |
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Preference number: 2 (lower is better) Translates to: LPRGLMGQRAQYVLCACAQVETP*GIRDTC Trigger: GCATGTGTCCCTTATGCCGCATGGGGTCTCCACCTG...CGCGCATGCGCACAGCACATACTGCGCACGCTGTCCCATCAGCCCTCTAGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR-3UTR GCA 90 bp | CTCAGGGGCAGCGGCTCGCTGTCTGGACTCCCCTGCTGGGTACCCATCTCCTCCATCAGCATGGCTCCCTaGTCATTTCTCTTGGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: LRGSGSLSGLPCWVPISSISMAP*SFLLGS Trigger: GGAGCCCAAGAGAAATGAGCAGGGAGCCATGCTGAT...GGAGGAGATGGGTACCCAGCAGGGGAGTCCAGACAGCGAGCCGCTGCCCCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR-3UTR GCA 90 bp | CTCAGGGGCAGCGGCTCGCTGTCTGGACTCCCCTGCTGGGTACCCATCTCCTCCAAGTCACATAAGTCCTaGGTGGTCCACCCACAGAGC | + |
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Preference number: 2 (lower is better) Translates to: LRGSGSLSGLPCWVPISSKSHKS*VVHPQS Trigger: GCTCTGTGGGTGGACCACGCAGGACTTATGTGACTT...GGAGGAGATGGGTACCCAGCAGGGGAGTCCAGACAGCGAGCCGCTGCCCCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR-3UTR TCA 90 bp | CTGCCTAGAGGGCTGATGGGACAGCGTGCGCAGTATGTGCTGTGCGCATGCGCGGAGTGGCTTCCGAGTTaGGCAGGAGACCTCTCAATG | + |
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Preference number: 2 (lower is better) Translates to: LPRGLMGQRAQYVLCACAEWLPS*AGDLSM Trigger: CATTGAGAGGTCTCCTGCTCAACTCGGAAGCCACTC...CGCGCATGCGCACAGCACATACTGCGCACGCTGTCCCATCAGCCCTCTAGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGGTGGGCTGGGTGGGTTCCTGCTGGATGTGGCTAGGGACAGGTTGGCATCCTCCAAGCAGAGTCTaGGAAACCGACCAGGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: QRVGWVGSCWMWLGTGWHPPSRV*ETDQEE Trigger: CTCCTCCTGGTCGGTTTCCCAGACTCTGCTTGGAGG...ATGCCAACCTGTCCCTAGCCACATCCAGCAGGAACCCACCCAGCCCACCCTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR-3UTR TCA 90 bp | CACCATCTGTGCACACATGTACCCCACCTGACACTATGGTGGCCACACCCCGGGTGTGAATGGTGGCCATaGGGAAGGTGTGGGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: HHLCTHVPHLTLWWPHPGCEWWP*GRCGEA Trigger: AGCCTCCCCACACCTTCCTCATGGCCACCATTCACA...CCCGGGGTGTGGCCACCATAGTGTCAGGTGGGGTACATGTGTGCACAGATGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR-3UTR GCA 90 bp | GCCAGAGTGTCTCTTAGTGCCACCACTCCCATCCCTTCAAGCTGGCTGGCATTGCAGGCTCTGGTCATGTaGCCGGCAGGTGAGTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: ARVSLSATTPIPSSWLALQALVM*PAGEWL Trigger: AAGCCACTCACCTGCCGGGCACATGACCAGAGCCTG...CAATGCCAGCCAGCTTGAAGGGATGGGAGTGGTGGCACTAAGAGACACTCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR-3UTR GCA 90 bp | CACCACTCCCATCCCTTCAAGCTGGCTGGCATTGCTACTTTGTGGTGGCTGATTAGGTGGGATGGGAGATaGCAGGTGGAGACCCCATGC | + |
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Preference number: 2 (lower is better) Translates to: HHSHPFKLAGIATLWWLIRWDGR*QVETPC Trigger: GCATGGGGTCTCCACCTGGCATCTCCCATCCCACCT...AATCAGCCACCACAAAGTAGCAATGCCAGCCAGCTTGAAGGGATGGGAGTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR CAA 90 bp | GCAAACGTCAGATGCCTTGCCATGAACCACAAGGCCCTGTGCATTTaGGCCTCCACCCTGACCCCATCGCCTGCATTCTCTTCCTTGGTT | + |
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Preference number: 2 (lower is better) Translates to: ANVRCLAMNHKALCI*ASTLTPSPAFSSLV Trigger: AACCAAGGAAGAGAATGCAGGCGATGGGGTCAGGGTGGAGGCCAAAATGCACAGGGCCTTGTGGTTCATGGCAAGGCATCTGACGTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR-3UTR TCA 90 bp | GGCCCTGGAACAAGGAAGGCTTGTACCTACTGTCATTCTCTAGACAGCTTGTTTCCTGTGCCCTGCAGGTaGGTGGCCCCCAAGTTGAGC | + |
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Preference number: 2 (lower is better) Translates to: GPGTRKACTYCHSLDSLFPVPCR*VAPKLS Trigger: GCTCAACTTGGGGGCCACTCACCTGCAGGGCACAGG...AAACAAGCTGTCTAGAGAATGACAGTAGGTACAAGCCTTCCTTGTTCCAGGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR-3UTR TCA 90 bp | GGCAACCATGCCTCCATCACAGTCCCTGATGGCTCACAGACTCTGCTTACATATTTGTCCCCTAGCCACTaGAGGGCAGAGAGCAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: GNHASITVPDGSQTLLTYLSPSH*RAESRS Trigger: GCTCCTGCTCTCTGCCCTTCAGTGGCTAGGGGACAA...ATATGTAAGCAGAGTCTGTGAGCCATCAGGGACTGTGATGGAGGCATGGTTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR-3UTR GCA 90 bp | TTCTCTTGGGCTCCCCTCAACACCCCTGCTCGTCTCAAACATCTCTCTACTGGAATGGGGGTGACAGGATaGGACAGGATGACCCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: FSWAPLNTPARLKHLSTGMGVTG*DRMTPE Trigger: CTCTGGGGTCATCCTGTCGCATCCTGTCACCCCCAT...TCCAGTAGAGAGATGTTTGAGACGAGCAGGGGTGTTGAGGGGAGCCCAAGAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR-3UTR CCA 90 bp | CACCACTCCCATCCCTTCAAGCTGGCTGGCATTGCTACTTTGTGGTGGCTGATTGATTTGGGTGTGAAGTaGGGTGAGGCCCTGACACCC | + |
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Preference number: 2 (lower is better) Translates to: HHSHPFKLAGIATLWWLIDLGVK*GEALTP Trigger: GGGTGTCAGGGCCTCACCCCACTTCACACCCAAATC...AATCAGCCACCACAAAGTAGCAATGCCAGCCAGCTTGAAGGGATGGGAGTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR-3UTR CCA 90 bp | AAACATCACTATCACCATGCGGGACAGGCAGGTGGGATGGGAGATGCCAGGTGGAGGCTGTGTGTGGAATaGATGTACCCTCAGGATGGC | + |
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Preference number: 2 (lower is better) Translates to: KHHYHHAGQAGGMGDARWRLCVE*MYPQDG Trigger: GCCATCCTGAGGGTACATCCATTCCACACACAGCCT...CCACCTGGCATCTCCCATCCCACCTGCCTGTCCCGCATGGTGATAGTGATGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR-3UTR TCA 90 bp | GTTTCTTTTTCTAAGGTGGGTGGGAAGAGCCTCTTTCAAGGCCAGCTCCTTCTCGGGTGTGAAGTGGGGTaGGGCCCTGACACCCCATTT | + |
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Preference number: 2 (lower is better) Translates to: VSFSKVGGKSLFQGQLLLGCEVG*GPDTPF Trigger: AAATGGGGTGTCAGGGCCTCACCCCACTTCACACCC...GAGAAGGAGCTGGCCTTGAAAGAGGCTCTTCCCACCCACCTTAGAAAAAGAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTTGGGCTCCCCTCAACACCCCTGCTCGTCTCAAACATCTCTCTACTGGACTCCATCACAGTCCCTaGTGGCTCACAGACTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: FSWAPLNTPARLKHLSTGLHHSP*WLTDSA Trigger: AGCAGAGTCTGTGAGCCATCAGGGACTGTGATGGAG...TCCAGTAGAGAGATGTTTGAGACGAGCAGGGGTGTTGAGGGGAGCCCAAGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR-3UTR GCA 90 bp | AAACATCACTATCACCATGCGGGACAGGCAGGTGGGATGGGAGATGCCAGGTGGGACAAATCCTGTCATTaGGGAGGTGTGGACACTGAG | + |
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Preference number: 2 (lower is better) Translates to: KHHYHHAGQAGGMGDARWDKSCH*GGVDTE Trigger: CTCAGTGTCCACACCTCCGCAATGACAGGATTTGTC...CCACCTGGCATCTCCCATCCCACCTGCCTGTCCCGCATGGTGATAGTGATGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR-3UTR CCA 90 bp | GGCCCTGGAACAAGGAAGGCTTGTACCTACTGTCATTCTCTAGACAGCTTGTTTGAGCAGAGGGTGGGCTaGGTGGGTTCCTGCTGGATG | + |
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Preference number: 2 (lower is better) Translates to: GPGTRKACTYCHSLDSLFEQRVG*VGSCWM Trigger: CATCCAGCAGGAACCCACCCAGCCCACCCTCTGCTC...AAACAAGCTGTCTAGAGAATGACAGTAGGTACAAGCCTTCCTTGTTCCAGGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR-3UTR TCA 90 bp | CACCATCTGTGCACACATGTACCCCACCTGACACTATGGTGGCCACACCCCGGGATGTTTGTTGAGAGATaGAGAAACCATGATCCACGG | + |
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Preference number: 2 (lower is better) Translates to: HHLCTHVPHLTLWWPHPGMFVER*RNHDPR Trigger: CCGTGGATCATGGTTTCTTCATCTCTCAACAAACAT...CCCGGGGTGTGGCCACCATAGTGTCAGGTGGGGTACATGTGTGCACAGATGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR-3UTR GCA 90 bp | CTCCCATGCTCCACATTGGTGAAGGCCCTGACCTGTAGAAAGGGACCACGGAAGGAAAGGGGCTCTATCTaGTCACATATGGAGTCCCTA | + |
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Preference number: 2 (lower is better) Translates to: LPCSTLVKALTCRKGPRKERGSI*SHMESL Trigger: TAGGGACTCCATATGTGAGCAGATAGAGCCCCTTTC...CTTCCGTGGTCCCTTTCTACAGGTCAGGGCCTTCACCAATGTGGAGCATGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR-3UTR GCA 90 bp | GGCCCTGGAACAAGGAAGGCTTGTACCTACTGTCATTCTCTAGACAGCTTGTTTCTGTCTGGACTCCCCTaGTGGGTACCCATCTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: GPGTRKACTYCHSLDSLFLSGLP*WVPISS Trigger: GGAGGAGATGGGTACCCAGCAGGGGAGTCCAGACAG...AAACAAGCTGTCTAGAGAATGACAGTAGGTACAAGCCTTCCTTGTTCCAGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR-3UTR CCA 90 bp | GCCAGAGTGTCTCTTAGTGCCACCACTCCCATCCCTTCAAGCTGGCTGGCATTGACCTCTGCACAGGCCTaGAATGGATTCTCAGTAGAT | + |
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Preference number: 2 (lower is better) Translates to: ARVSLSATTPIPSSWLALTSAQA*NGFSVD Trigger: ATCTACTGAGAATCCATTCCAGGCCTGTGCAGAGGT...CAATGCCAGCCAGCTTGAAGGGATGGGAGTGGTGGCACTAAGAGACACTCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR-3UTR CCA 90 bp | GTTTCTTTTTCTAAGGTGGGTGGGAAGAGCCTCTTTCAAGGCCAGCTCCTTCTCAACTTGCCAGAGCCTTaGGAGCCCCAGAGGCCACTA | + |
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Preference number: 2 (lower is better) Translates to: VSFSKVGGKSLFQGQLLLNLPEP*EPQRPL Trigger: TAGTGGCCTCTGGGGCTCCCAAGGCTCTGGCAAGTT...GAGAAGGAGCTGGCCTTGAAAGAGGCTCTTCCCACCCACCTTAGAAAAAGAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR-3UTR GCA 90 bp | TTCTCTTGGGCTCCCCTCAACACCCCTGCTCGTCTCAAACATCTCTCTACTGGACTCATTCTCTCCCCTTaGTCCTGCCTCTTAACACTG | + |
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Preference number: 2 (lower is better) Translates to: FSWAPLNTPARLKHLSTGLILSP*SCLLTL Trigger: CAGTGTTAAGAGGCAGGAGCAAGGGGAGAGAATGAG...TCCAGTAGAGAGATGTTTGAGACGAGCAGGGGTGTTGAGGGGAGCCCAAGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR-3UTR CCA 90 bp | CCCAAACTACCAGAGTCCTCTTCACCCTGGCATCAGCATGGCTCCCTGCTCATTTGGAAGAGGCCCAGCTaGGTTGCAAGAATAAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: PKLPESSSPWHQHGSLLIWKRPS*VARIRK Trigger: CTTTCTTATTCTTGCAACCCAGCTGGGCCTCTTCCA...AATGAGCAGGGAGCCATGCTGATGCCAGGGTGAAGAGGACTCTGGTAGTTTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR-3UTR CCA 90 bp | ACTCTGGGAAAAGCAGCTGCTTCAGACTCCATGTCAGGCAACAGTTCTGCAGTAGGTTCCTGCTGGATGTaGCTAGGGACAGGTTGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: TLGKAAASDSMSGNSSAVGSCWM*LGTGWH Trigger: ATGCCAACCTGTCCCTAGCCACATCCAGCAGGAACC...TACTGCAGAACTGTTGCCTGACATGGAGTCTGAAGCAGCTGCTTTTCCCAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR-3UTR CCA 90 bp | CTATACTTTCCCATGGCGCCCAAGGAGATGGAAAATAGGCTGCTGGTTATGGGAGATGTACCCTCAGGATaGCTCAGGAAACGCTGGACC | + |
|
Preference number: 2 (lower is better) Translates to: LYFPMAPKEMENRLLVMGDVPSG*LRKRWT Trigger: GGTCCAGCGTTTCCTGAGCCATCCTGAGGGTACATC...TCCCATAACCAGCAGCCTATTTTCCATCTCCTTGGGCGCCATGGGAAAGTATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR-3UTR CCA 90 bp | ACTCTGGGAAAAGCAGCTGCTTCAGACTCCATGTCAGGCAACAGTTCTGCAGTAGCCATGAGGAAGGTGTaGGGAGGCTGTGTGTGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: TLGKAAASDSMSGNSSAVAMRKV*GGCVWN Trigger: ATTCCACACACAGCCTCCCCACACCTTCCTCATGGC...TACTGCAGAACTGTTGCCTGACATGGAGTCTGAAGCAGCTGCTTTTCCCAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR-3UTR TCA 90 bp | GGCCCTGGAACAAGGAAGGCTTGTACCTACTGTCATTCTCTAGACAGCTTGTTTTCAGATGCCTTGCCATaGACCACAAGGCCCTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: GPGTRKACTYCHSLDSLFSDALP*TTRPCA Trigger: TGCACAGGGCCTTGTGGTTCATGGCAAGGCATCTGA...AAACAAGCTGTCTAGAGAATGACAGTAGGTACAAGCCTTCCTTGTTCCAGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR-3UTR GCA 90 bp | ACTCTGGGAAAAGCAGCTGCTTCAGACTCCATGTCAGGCAACAGTTCTGCAGTAACATCACTATCACCATaGGGGACAGGCAGGTGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: TLGKAAASDSMSGNSSAVTSLSP*GTGRWD Trigger: ATCCCACCTGCCTGTCCCGCATGGTGATAGTGATGT...TACTGCAGAACTGTTGCCTGACATGGAGTCTGAAGCAGCTGCTTTTCCCAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR-3UTR CCA 90 bp | ACTCTGGGAAAAGCAGCTGCTTCAGACTCCATGTCAGGCAACAGTTCTGCAGTAGGTAGTCTACCAGTCTaGGGTTCCCTGGAAACAGGA | + |
|
Preference number: 2 (lower is better) Translates to: TLGKAAASDSMSGNSSAVGSLPV*GSLETG Trigger: TCCTGTTTCCAGGGAACCCCAGACTGGTAGACTACC...TACTGCAGAACTGTTGCCTGACATGGAGTCTGAAGCAGCTGCTTTTCCCAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR-3UTR CCA 90 bp | CTATACTTTCCCATGGCGCCCAAGGAGATGGAAAATAGGCTGCTGGTTATGGGAAGTCTGACAGGAACATaGCCGGACGGAAGAACCAAG | + |
|
Preference number: 2 (lower is better) Translates to: LYFPMAPKEMENRLLVMGSLTGT*PDGRTK Trigger: CTTGGTTCTTCCGTCCGGCCATGTTCCTGTCAGACT...TCCCATAACCAGCAGCCTATTTTCCATCTCCTTGGGCGCCATGGGAAAGTATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR-3UTR CCA 90 bp | TTCTCTTGGGCTCCCCTCAACACCCCTGCTCGTCTCAAACATCTCTCTACTGGAACATATGTTTGTGGGTaGTGGGTTTCAATCCTCGCC | + |
|
Preference number: 2 (lower is better) Translates to: FSWAPLNTPARLKHLSTGTYVCG*WVSILA Trigger: GGCGAGGATTGAAACCCACCACCCACAAACATATGT...TCCAGTAGAGAGATGTTTGAGACGAGCAGGGGTGTTGAGGGGAGCCCAAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR CAA 90 bp | GAATCAAGTCAAGCTATTCTCTGCTCTATAGAACTTGCCAGAGCCTaGGGAGCCCCAGAGGCCACTAAAGCTATTCCAGAGAGACTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: ESSQAILCSIELARA*GAPEATKAIPERLW Trigger: CCAGAGTCTCTCTGGAATAGCTTTAGTGGCCTCTGGGGCTCCCAAGGCTCTGGCAAGTTCTATAGAGCAGAGAATAGCTTGACTTGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR-3UTR GCA 90 bp | ACTCTGGGAAAAGCAGCTGCTTCAGACTCCATGTCAGGCAACAGTTCTGCAGTACAAGCTGGCTGGCATTaGTACTTTGTGGTGGCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: TLGKAAASDSMSGNSSAVQAGWH*YFVVAD Trigger: ATCAGCCACCACAAAGTAGCAATGCCAGCCAGCTTG...TACTGCAGAACTGTTGCCTGACATGGAGTCTGAAGCAGCTGCTTTTCCCAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR CAA 90 bp | GCCTCTGACCTCTGCACAGGCCTGGAATGGATTCTCAGTAGATGTTaGTTGAGAGATGAAGAAACCATGATCCACGGTGATAGCGATCCA | + |
|
Preference number: 2 (lower is better) Translates to: ASDLCTGLEWILSRC*LRDEETMIHGDSDP Trigger: TGGATCGCTATCACCGTGGATCATGGTTTCTTCATCTCTCAACAAACATCTACTGAGAATCCATTCCAGGCCTGTGCAGAGGTCAGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR-3UTR GCA 90 bp | CTATACTTTCCCATGGCGCCCAAGGAGATGGAAAATAGGCTGCTGGTTATGGGACTGAGTGTGTGTGTGTaGTCACTGTCTCTCATGTTG | + |
|
Preference number: 2 (lower is better) Translates to: LYFPMAPKEMENRLLVMGLSVCV*SLSLML Trigger: CAACATGAGAGACAGTGAGCACACACACACACTCAG...TCCCATAACCAGCAGCCTATTTTCCATCTCCTTGGGCGCCATGGGAAAGTATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR-3UTR CCA 90 bp | CTATACTTTCCCATGGCGCCCAAGGAGATGGAAAATAGGCTGCTGGTTATGGGACTGCATTCTCTTCCTTaGTTAGCTCCTATCACACCC | + |
|
Preference number: 2 (lower is better) Translates to: LYFPMAPKEMENRLLVMGLHSLP*LAPITP Trigger: GGGTGTGATAGGAGCTAACCAAGGAAGAGAATGCAG...TCCCATAACCAGCAGCCTATTTTCCATCTCCTTGGGCGCCATGGGAAAGTATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR-3UTR CCA 90 bp | CTATACTTTCCCATGGCGCCCAAGGAGATGGAAAATAGGCTGCTGGTTATGGGATGCACAGGCCTGGAATaGATTCTCAGTAGATGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: LYFPMAPKEMENRLLVMGCTGLE*ILSRCL Trigger: CAAACATCTACTGAGAATCCATTCCAGGCCTGTGCA...TCCCATAACCAGCAGCCTATTTTCCATCTCCTTGGGCGCCATGGGAAAGTATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR-3UTR CCA 90 bp | CTATACTTTCCCATGGCGCCCAAGGAGATGGAAAATAGGCTGCTGGTTATGGGAAGAATAAGAAAGTCTTaGAGTTGTCCGGCATGGACT | + |
|
Preference number: 2 (lower is better) Translates to: LYFPMAPKEMENRLLVMGRIRKS*SCPAWT Trigger: AGTCCATGCCGGACAACTCCAAGACTTTCTTATTCT...TCCCATAACCAGCAGCCTATTTTCCATCTCCTTGGGCGCCATGGGAAAGTATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR-3UTR CAA 90 bp | CCTCAGGGGCAGCGGCTCGCTGTCTGGACTCCCCTGCTGGGTACCCATCTCCTCCATACCACTGAGCCTTaGAGGATCAGGAAAGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PQGQRLAVWTPLLGTHLLHTTEP*RIRKGA Trigger: AGCCCCTTTCCTGATCCTCAAAGGCTCAGTGGTATG...GAGGAGATGGGTACCCAGCAGGGGAGTCCAGACAGCGAGCCGCTGCCCCTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR GCA 72 bp | GAGACCCCATGCGGCATAAGGGACACATGCAAGACCTaGCCCAGTGGACAAAGGACGGTGGCCATTGGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: ETPCGIRDTCKT*PSGQRTVAIGV Trigger: CACCCCAATGGCCACCGTCCTTTGTCCACTGGGGCAGGTCTTGCATGTGTCCCTTATGCCGCATGGGGTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR GCA 72 bp | CTATCACCATGCGGGACAGGCAGGTGGGATGGGAGATaGCAGGTGGAGACCCCATGCGGCATAAGGGACACA | + |
|
Preference number: 3 (lower is better) Translates to: LSPCGTGRWDGR*QVETPCGIRDT Trigger: TGTGTCCCTTATGCCGCATGGGGTCTCCACCTGGCATCTCCCATCCCACCTGCCTGTCCCGCATGGTGATAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR TCA 72 bp | TGTTGGCGTCCAGGCTCTGGTCATGTGCCCGGCAGGTaGGTGGCTTCCGAGTTGAGCAGGAGACCTCTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: CWRPGSGHVPGR*VASELSRRPLN Trigger: ATTGAGAGGTCTCCTGCTCAACTCGGAAGCCACTCACCTGCCGGGCACATGACCAGAGCCTGGACGCCAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR CCA 72 bp | GACACCCCATTTCCCGCTGGCCCTCCAAGCAGAGTCTaGGAAACCGACCAGGAGGAGAATAGGGTGTCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: DTPFPAGPPSRV*ETDQEENRVSV Trigger: GACTGACACCCTATTCTCCTCCTGGTCGGTTTCCCAGACTCTGCTTGGAGGGCCAGCGGGAAATGGGGTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR CCA 72 bp | GTGTGCTCACTGTCTCTCATGTTGGCGTCCAGGCTCTaGTCATGTGCCCGGCAGGTGAGTGGCTTCCGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: VCSLSLMLASRL*SCARQVSGFRV Trigger: AACTCGGAAGCCACTCACCTGCCGGGCACATGACCAGAGCCTGGACGCCAACATGAGAGACAGTGAGCACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR TCA 72 bp | GCATTCAGGGATCCCTGTCTCTTGTCCCCTAGCCACTaGAGGGCAGAGAGCAGGAGCAAGTTGGAGTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: AFRDPCLLSPSH*RAESRSKLECG Trigger: CCCACACTCCAACTTGCTCCTGCTCTCTGCCCTTCAGTGGCTAGGGGACAAGAGACAGGGATCCCTGAATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR GCA 72 bp | AACGTCAGATGCCTTGCCATGAACCACAAGGCCCTGTaGATTTTGGCCTCCACCCTGACCCCATCGCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: NVRCLAMNHKAL*ILASTLTPSPA Trigger: TGCAGGCGATGGGGTCAGGGTGGAGGCCAAAATGCACAGGGCCTTGTGGTTCATGGCAAGGCATCTGACGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR CCA 72 bp | AACATCACTATCACCATGCGGGACAGGCAGGTGGGATaGGAGATGCCAGGTGGAGACCCCATGCGGCATAAG | + |
|
Preference number: 3 (lower is better) Translates to: NITITMRDRQVG*EMPGGDPMRHK Trigger: CTTATGCCGCATGGGGTCTCCACCTGGCATCTCCCATCCCACCTGCCTGTCCCGCATGGTGATAGTGATGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGAGTGTCTCTTAGTGCCACCACTCCCATCCCTTCAAGCTGGCTGGCATTGTCACTGTCTCTCATGTaGGCGTCCAGGCTCTGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: ARVSLSATTPIPSSWLALSLSLM*ASRLWS Trigger: TGACCAGAGCCTGGACGCCAACATGAGAGACAGTGA...CAATGCCAGCCAGCTTGAAGGGATGGGAGTGGTGGCACTAAGAGACACTCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR TCA 72 bp | CTAACCCTGTGCCCTGCAGGTGAGTGGCCCCCAAGTTaGGCAGGAGACATCTCAGTGCTACAAGCTACCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LTLCPAGEWPPS*AGDISVLQATC Trigger: ACAGGTAGCTTGTAGCACTGAGATGTCTCCTGCTCAACTTGGGGGCCACTCACCTGCAGGGCACAGGGTTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR TCA 72 bp | CTGGTCATGTGCCCGGCAGGTGAGTGGCTTCCGAGTTaGGCAGGAGACCTCTCAATGTCACAAGCTACTCGT | + |
|
Preference number: 3 (lower is better) Translates to: LVMCPAGEWLPS*AGDLSMSQATR Trigger: ACGAGTAGCTTGTGACATTGAGAGGTCTCCTGCTCAACTCGGAAGCCACTCACCTGCCGGGCACATGACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR GCA 72 bp | GTGCCACCACTCCCATCCCTTCAAGCTGGCTGGCATTaGTACTTTGTGGTGGCTGATTTAGCCCAGAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: VPPLPSLQAGWH*YFVVADLAQRE Trigger: CTCCCTCTGGGCTAAATCAGCCACCACAAAGTAGCAATGCCAGCCAGCTTGAAGGGATGGGAGTGGTGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR GCA 72 bp | TGGTCCACCCACAGAGCCTGCCAATGTCACCATCTGTaGACACATGTACCCCACCTGACACTATGGTGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: WSTHRACQCHHL*THVPHLTLWWP Trigger: TGGCCACCATAGTGTCAGGTGGGGTACATGTGTGCACAGATGGTGACATTGGCAGGCTCTGTGGGTGGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR CCA 72 bp | ATGGTGGCCATGAGGAAGGTGTGGGGAGGCTGTGTGTaGAATGGATGTACCCTCAGGATGGCTCAGGAAACG | + |
|
Preference number: 3 (lower is better) Translates to: MVAMRKVWGGCV*NGCTLRMAQET Trigger: CGTTTCCTGAGCCATCCTGAGGGTACATCCATTCCACACACAGCCTCCCCACACCTTCCTCATGGCCACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR CCA 72 bp | ATTGGTACCGAATTCCTCTTGGGTACAGCCTCAGAATaGCTGCCTAGAGGGCTGATGGGACAGCGTGCGCAG | + |
|
Preference number: 3 (lower is better) Translates to: IGTEFLLGTASE*LPRGLMGQRAQ Trigger: CTGCGCACGCTGTCCCATCAGCCCTCTAGGCAGCCATTCTGAGGCTGTACCCAAGAGGAATTCGGTACCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR CCA 72 bp | TGGCGCCCAAGGAGATGGAAAATAGGCTGCTGGTTATaGGAACTTCCCTTCTCTCAAGCCACGACCCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: WRPRRWKIGCWL*ELPFSQATTPP Trigger: GGGTGGGGTCGTGGCTTGAGAGAAGGGAAGTTCCCATAACCAGCAGCCTATTTTCCATCTCCTTGGGCGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR TCA 72 bp | CCACATCTAGAACATTCTAGCATACCACTGAGCCTCTaGGGACCGGGAAGGGGCTCTAGGCAACCATGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: PHLEHSSIPLSL*GPGRGSRQPCL Trigger: GAGGCATGGTTGCCTAGAGCCCCTTCCCGGTCCTCAGAGGCTCAGTGGTATGCTAGAATGTTCTAGATGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR GCA 72 bp | CCCTGCTCATTTCTCTTGGGCTCCCCTCAACACCCCTaGTCGTCTCAAACATCTCTCTACTGGAGTCTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: PCSFLLGSPQHP*SSQTSLYWSLL Trigger: GAGCAGACTCCAGTAGAGAGATGTTTGAGACGAGCAGGGGTGTTGAGGGGAGCCCAAGAGAAATGAGCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR-3UTR CAA 90 bp | GCCCTGCAGGTGAGTGGCCCCCAAGTTGAGCAGGAGACATCTCAGTGCTACAAGGAATCTGTGTACCCCTaGTCTTCTATACCACAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: ALQVSGPQVEQETSQCYKESVYP*SSIPQS Trigger: GGACTGTGGTATAGAAGACAAGGGGTACACAGATTC...CTTGTAGCACTGAGATGTCTCCTGCTCAACTTGGGGGCCACTCACCTGCAGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR TCA 72 bp | TACAACCCTCTAGAGCAAACGTCAGATGCCTTGCCATaGACCACAAGGCCCTGTGCATTTTGGCCTCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: YNPLEQTSDALP*TTRPCAFWPPP Trigger: GGGTGGAGGCCAAAATGCACAGGGCCTTGTGGTTCATGGCAAGGCATCTGACGTTTGCTCTAGAGGGTTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR TCA 72 bp | CCACCTGAAAGCCAGGAGTCTGTGCTTGTGAATCACTaGGCCCCGCCCTGTCTTCTGTGGGTGGTTTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: PPESQESVLVNH*APPCLLWVVSF Trigger: AAAAGAAACCACCCACAGAAGACAGGGCGGGGCTCAGTGATTCACAAGCACAGACTCCTGGCTTTCAGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR GCA 72 bp | GAGACACTGGGGACTGAGCCAAGTGCCTCTGACCTCTaGACAGGCCTGGAATGGATTCTCAGTAGATGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: ETLGTEPSASDL*TGLEWILSRCL Trigger: CAAACATCTACTGAGAATCCATTCCAGGCCTGTGCAGAGGTCAGAGGCACTTGGCTCAGTCCCCAGTGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR CCA 72 bp | AGGGTAGGAGGAGACAGGAGCTGGAAGAGGCCCAGCTaGGTTGCAAGAATAAGAAAGTCTTGGAGTTGTCCG | + |
|
Preference number: 3 (lower is better) Translates to: RVGGDRSWKRPS*VARIRKSWSCP Trigger: CGGACAACTCCAAGACTTTCTTATTCTTGCAACCCAGCTGGGCCTCTTCCAGCTCCTGTCTCCTCCTACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR CCA 72 bp | CTCTTAGTGCCACCACTCCCATCCCTTCAAGCTGGCTaGCATTGCTACTTTGTGGTGGCTGATTTAGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LLVPPLPSLQAG*HCYFVVADLAQ Trigger: CTGGGCTAAATCAGCCACCACAAAGTAGCAATGCCAGCCAGCTTGAAGGGATGGGAGTGGTGGCACTAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR CCA 72 bp | TTCCCATGGCGCCCAAGGAGATGGAAAATAGGCTGCTaGTTATGGGAACTTCCCTTCTCTCAAGCCACGACC | + |
|
Preference number: 3 (lower is better) Translates to: FPWRPRRWKIGC*LWELPFSQATT Trigger: GGTCGTGGCTTGAGAGAAGGGAAGTTCCCATAACCAGCAGCCTATTTTCCATCTCCTTGGGCGCCATGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR CCA 72 bp | CCTGCTGGGTACCCATCTCCTCCCTATACTTTCCCATaGCGCCCAAGGAGATGGAAAATAGGCTGCTGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: PAGYPSPPYTFP*RPRRWKIGCWL Trigger: TAACCAGCAGCCTATTTTCCATCTCCTTGGGCGCCATGGGAAAGTATAGGGAGGAGATGGGTACCCAGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR CCA 72 bp | GCCCCAGAGGCCACTAAAGCTATTCCAGAGAGACTCTaGGAAAAGCAGCTGCTTCAGACTCCATGTCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: APEATKAIPERL*EKQLLQTPCQA Trigger: TGCCTGACATGGAGTCTGAAGCAGCTGCTTTTCCCAGAGTCTCTCTGGAATAGCTTTAGTGGCCTCTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR CCA 72 bp | CGCCCTGTCTTCTGTGGGTGGTTTCTTTTTCTAAGGTaGGTGGGAAGAGCCTCTTTCAAGGCCAGCTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: RPVFCGWFLFLR*VGRASFKASSF Trigger: GAAGGAGCTGGCCTTGAAAGAGGCTCTTCCCACCCACCTTAGAAAAAGAAACCACCCACAGAAGACAGGGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR-3UTR CAA 90 bp | ACTCTGGGAAAAGCAGCTGCTTCAGACTCCATGTCAGGCAACAGTTCTGCAGTAGTGGCTAGGGACAGGTaGGCATTCAGGGATCCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: TLGKAAASDSMSGNSSAVVARDR*AFRDPC Trigger: ACAGGGATCCCTGAATGCCAACCTGTCCCTAGCCAC...TACTGCAGAACTGTTGCCTGACATGGAGTCTGAAGCAGCTGCTTTTCCCAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR TCA 72 bp | AGGGGCTCTAGGCAACCATGCCTCCATCACAGTCCCTaGTGGCTCACAGACTCTGCTTACATATGTTTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: RGSRQPCLHHSP*WLTDSAYICLW Trigger: CCACAAACATATGTAAGCAGAGTCTGTGAGCCATCAGGGACTGTGATGGAGGCATGGTTGCCTAGAGCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR TCA 72 bp | AATAAAATCCACCTGAAAGCCAGGAGTCTGTGCTTGTaGATCACTGAGCCCCGCCCTGTCTTCTGTGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: NKIHLKARSLCL*ITEPRPVFCGW Trigger: CCACCCACAGAAGACAGGGCGGGGCTCAGTGATTCACAAGCACAGACTCCTGGCTTTCAGGTGGATTTTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR GCA 72 bp | GTGAGTGGCCCCCAAGTTGAGCAGGAGACATCTCAGTaGTACAAGCTACCTGTGATAGCTCCAGTGACCATT | + |
|
Preference number: 3 (lower is better) Translates to: VSGPQVEQETSQ*YKLPVIAPVTI Trigger: AATGGTCACTGGAGCTATCACAGGTAGCTTGTAGCACTGAGATGTCTCCTGCTCAACTTGGGGGCCACTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR GCA 72 bp | ACTTTCCCATGGCGCCCAAGGAGATGGAAAATAGGCTaGTGGTTATGGGAACTTCCCTTCTCTCAAGCCACG | + |
|
Preference number: 3 (lower is better) Translates to: TFPWRPRRWKIG*WLWELPFSQAT Trigger: CGTGGCTTGAGAGAAGGGAAGTTCCCATAACCAGCAGCCTATTTTCCATCTCCTTGGGCGCCATGGGAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGAGTGTCTCTTAGTGCCACCACTCCCATCCCTTCAAGCTGGCTGGCATTGTCTGCTTACATATGTTaGTGGGTGGTGGGTTTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: ARVSLSATTPIPSSWLALSAYIC*WVVGFN Trigger: ATTGAAACCCACCACCCACAAACATATGTAAGCAGA...CAATGCCAGCCAGCTTGAAGGGATGGGAGTGGTGGCACTAAGAGACACTCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR TCA 72 bp | CATTCTCTCCCCTTGCTCCTGCCTCTTAACACTGTCTaGAGCCAGACTATAGACCTGAGTGTGTGTGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: HSLPLLLPLNTV*SQTIDLSVCVC Trigger: GCACACACACACACTCAGGTCTATAGTCTGGCTTCAGACAGTGTTAAGAGGCAGGAGCAAGGGGAGAGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR CCA 72 bp | CAAACTTATCCCAAACTACCAGAGTCCTCTTCACCCTaGCATCAGCATGGCTCCCTGCTCATTTCTCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: QTYPKLPESSSP*HQHGSLLISLG Trigger: CCCAAGAGAAATGAGCAGGGAGCCATGCTGATGCCAGGGTGAAGAGGACTCTGGTAGTTTGGGATAAGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR CCA 72 bp | AATAGAAAGAAAACTACCCTGGGGTCCTTAGAGTCCTaGAGAACGCTTCATCTGCCTTGCCCGTCCCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: NRKKTTLGSLES*RTLHLPCPSLS Trigger: AGACAGGGACGGGCAAGGCAGATGAAGCGTTCTCCAGGACTCTAAGGACCCCAGGGTAGTTTTCTTTCTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR GCA 72 bp | ATGCCTCCATCACAGTCCCTGATGGCTCACAGACTCTaGTTACATATGTTTGTGGGTGGTGGGTTTCAATCC | + |
|
Preference number: 3 (lower is better) Translates to: MPPSQSLMAHRL*LHMFVGGGFQS Trigger: GGATTGAAACCCACCACCCACAAACATATGTAAGCAGAGTCTGTGAGCCATCAGGGACTGTGATGGAGGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR TCA 72 bp | ACCATTCTAGAACATTCTAGCATACCACTGAGCCTTTaGGGATCAGGAAAGGGGCTCTATCTGCTCACATAT | + |
|
Preference number: 3 (lower is better) Translates to: TILEHSSIPLSL*GSGKGLYLLTY Trigger: ATATGTGAGCAGATAGAGCCCCTTTCCTGATCCTCAAAGGCTCAGTGGTATGCTAGAATGTTCTAGAATGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR CCA 72 bp | CTTATACTCTTTGGATGTGGTCTCAAATTCTATTTTTaGCCCTGGAACAAGGAAGGCTTGTACCTACTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LILFGCGLKFYF*PWNKEGLYLLS Trigger: TGACAGTAGGTACAAGCCTTCCTTGTTCCAGGGCCAAAAATAGAATTTGAGACCACATCCAAAGAGTATAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| CDS-3UTR TCA 90 bp | CCTCAGGGGCAGCGGCTCGCTGTCTGGACTCCCCTGCTGGGTACCCATCTCCTCTGGGGACTGTGGGGGTaGCTGAGCGGGTGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PQGQRLAVWTPLLGTHLLWGLWG*LSGCSR Trigger: CCTGCTGCACCCGCTCAGTCACCCCCACAGTCCCCA...GAGGAGATGGGTACCCAGCAGGGGAGTCCAGACAGCGAGCCGCTGCCCCTGAGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR GCA 90 bp | CAGAGGGTGGGCTGGGTGGGTTCCTGCTGGATGTGGCTAGGGACAGGTTGGCATGCCATCCTGCACAGCTaGGGCGTTCCTGGCTACGTG | + |
|
Preference number: 4 (lower is better) Translates to: QRVGWVGSCWMWLGTGWHAILHS*GVPGYV Trigger: CACGTAGCCAGGAACGCCGCAGCTGTGCAGGATGGC...ATGCCAACCTGTCCCTAGCCACATCCAGCAGGAACCCACCCAGCCCACCCTCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| CDS-3UTR GCA 90 bp | GCCCTGCAGGTGAGTGGCCCCCAAGTTGAGCAGGAGACATCTCAGTGCTACAAGGGGCCAGGCGGGCCATaGTCAGTACGTGGTTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ALQVSGPQVEQETSQCYKGPGGP*SVRGCR Trigger: CCGGCAACCACGTACTGAGCATGGCCCGCCTGGCCC...CTTGTAGCACTGAGATGTCTCCTGCTCAACTTGGGGGCCACTCACCTGCAGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR GCA 90 bp | CTCAGGGGCAGCGGCTCGCTGTCTGGACTCCCCTGCTGGGTACCCATCTCCTCCTTGTGGCCACATCCCTaGAGTTGCTCAGTTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRGSGSLSGLPCWVPISSLWPHP*SCSVPL Trigger: CAGAGGAACTGAGCAACTGCAGGGATGTGGCCACAA...GGAGGAGATGGGTACCCAGCAGGGGAGTCCAGACAGCGAGCCGCTGCCCCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| CDS-3UTR GCA 90 bp | GCCTCTGAGGACCGGGAAGGGGCTCTAGGCAACCATGCCTCCATCACAGTCCCTTACTGGGAGCCATCCTaGACAGCTGCGGCGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASEDREGALGNHASITVPYWEPS*TAAAFL Trigger: CAGGAACGCCGCAGCTGTGCAGGATGGCTCCCAGTA...AGGGACTGTGATGGAGGCATGGTTGCCTAGAGCCCCTTCCCGGTCCTCAGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| CDS-3UTR CCA 90 bp | CCTCAGGGGCAGCGGCTCGCTGTCTGGACTCCCCTGCTGGGTACCCATCTCCTCACCACATTTCTTCCCTaGGACACCACCGTTAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: PQGQRLAVWTPLLGTHLLTTFLP*DTTVRH Trigger: GTGTCTAACGGTGGTGTCCCAGGGAAGAAATGTGGT...GAGGAGATGGGTACCCAGCAGGGGAGTCCAGACAGCGAGCCGCTGCCCCTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| CDS-3UTR TCA 90 bp | CTCAGGGGCAGCGGCTCGCTGTCTGGACTCCCCTGCTGGGTACCCATCTCCTCCAGAAGTAATCCACAATaGACTTGCGCACGAAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LRGSGSLSGLPCWVPISSRSNPQ*TCARSP Trigger: CGGACTTCGTGCGCAAGTTCATTGTGGATTACTTCT...GGAGGAGATGGGTACCCAGCAGGGGAGTCCAGACAGCGAGCCGCTGCCCCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| CDS-3UTR GCA 90 bp | GGCTGTGTGTGGAATGGATGTACCCTCAGGATGGCTCAGGAAACGCTGGACCACCTGACTCTGGCCACGTaGCAGCTCCCGGTAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GCVWNGCTLRMAQETLDHLTLAT*QLPVAG Trigger: ACCAGCTACCGGGAGCTGGCACGTGGCCAGAGTCAG...GTGGTCCAGCGTTTCCTGAGCCATCCTGAGGGTACATCCATTCCACACACAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| CDS-3UTR CCA 90 bp | GCCCTGCAGGTGAGTGGCCCCCAAGTTGAGCAGGAGACATCTCAGTGCTACAAGCAGCCAGCTTCCCCCTaGAGGAGATCCGCACGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ALQVSGPQVEQETSQCYKQPASP*RRSARH Trigger: ATGACGTGCGGATCTCCTCCAGGGGGAAGCTGGCTG...CTTGTAGCACTGAGATGTCTCCTGCTCAACTTGGGGGCCACTCACCTGCAGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| 3UTR CAA 72 bp | GTGCGCAGTATGTGCTGTGCGCATGCGCGTATGTCCTaGCTCCCATGCTCCACATTGGTGAAGGCCCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: VRSMCCAHARMS*LPCSTLVKALT Trigger: GGTCAGGGCCTTCACCAATGTGGAGCATGGGAGCAAGGACATACGCGCATGCGCACAGCACATACTGCGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| CDS-3UTR TCA 90 bp | GCCTCTGAGGACCGGGAAGGGGCTCTAGGCAACCATGCCTCCATCACAGTCCCTATGACCTCCGTCTTGTaGCAGATGGTGAACGTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ASEDREGALGNHASITVPMTSVL*QMVNVP Trigger: CGGAACGTTCACCATCTGTCACAAGACGGAGGTCAT...AGGGACTGTGATGGAGGCATGGTTGCCTAGAGCCCCTTCCCGGTCCTCAGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| CDS-3UTR TCA 90 bp | CTGCCTAGAGGGCTGATGGGACAGCGTGCGCAGTATGTGCTGTGCGCATGCGCGTGTCATAATGCTGAATaGTCTCTCCGACGGCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPRGLMGQRAQYVLCACACHNAE*SLRRRS Trigger: TGACCGCCGTCGGAGAGATCATTCAGCATTATGACA...CGCGCATGCGCACAGCACATACTGCGCACGCTGTCCCATCAGCCCTCTAGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR GCA 90 bp | CTGCCTAGAGGGCTGATGGGACAGCGTGCGCAGTATGTGCTGTGCGCATGCGCGGTTGCTCAGTTCCTCTaGAGACAGGATGATGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: LPRGLMGQRAQYVLCACAVAQFL*RQDDGT Trigger: GGTACCATCATCCTGTCTGCAGAGGAACTGAGCAAC...CGCGCATGCGCACAGCACATACTGCGCACGCTGTCCCATCAGCCCTCTAGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| CDS-3UTR CCA 90 bp | CCTCAGGGGCAGCGGCTCGCTGTCTGGACTCCCCTGCTGGGTACCCATCTCCTCATAGATCCGGGCTCTTaGAGTCAACATCGTAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PQGQRLAVWTPLLGTHLLIDPGS*SQHRRD Trigger: ATCTCTACGATGTTGACTCCAAGAGCCCGGATCTAT...GAGGAGATGGGTACCCAGCAGGGGAGTCCAGACAGCGAGCCGCTGCCCCTGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR CCA 90 bp | CAGAGGGTGGGCTGGGTGGGTTCCTGCTGGATGTGGCTAGGGACAGGTTGGCATAGGGTACAGAAGGCCTaGCCCAGGAAGTCGTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: QRVGWVGSCWMWLGTGWHRVQKA*PRKSCL Trigger: TAAACACGACTTCCTGGGCCAGGCCTTCTGTACCCT...ATGCCAACCTGTCCCTAGCCACATCCAGCAGGAACCCACCCAGCCCACCCTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| CDS-3UTR CCA 90 bp | GGCAACCATGCCTCCATCACAGTCCCTGATGGCTCACAGACTCTGCTTACATATAGCAGGTGGCGGGCGTaGGCGGATGCCCTGTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GNHASITVPDGSQTLLTYSRWRA*ADALCL Trigger: AAGGCACAGGGCATCCGCCCACGCCCGCCACCTGCT...ATATGTAAGCAGAGTCTGTGAGCCATCAGGGACTGTGATGGAGGCATGGTTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR GCA 90 bp | CAGAGGGTGGGCTGGGTGGGTTCCTGCTGGATGTGGCTAGGGACAGGTTGGCATAGGGGTTCTCCTGGTTaGCATTCAGGGGAAACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QRVGWVGSCWMWLGTGWHRGSPG*HSGETH Trigger: ATGAGTTTCCCCTGAATGGCAACCAGGAGAACCCCT...ATGCCAACCTGTCCCTAGCCACATCCAGCAGGAACCCACCCAGCCCACCCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| CDS-3UTR GCA 90 bp | GGCAACCATGCCTCCATCACAGTCCCTGATGGCTCACAGACTCTGCTTACATATGCACGGTGCGCAGGCTaGTGTGGTAGGCCTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GNHASITVPDGSQTLLTYARCAG*CGRPPG Trigger: TCCTGGAGGCCTACCACAGCAGCCTGCGCACCGTGC...ATATGTAAGCAGAGTCTGTGAGCCATCAGGGACTGTGATGGAGGCATGGTTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR CCA 90 bp | CCCAAACTACCAGAGTCCTCTTCACCCTGGCATCAGCATGGCTCCCTGCTCATTGCCATGCTCAGTACGTaGTTGCCGGTGCGGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PKLPESSSPWHQHGSLLIAMLST*LPVRST Trigger: TGTGGACCGCACCGGCAACCACGTACTGAGCATGGC...AATGAGCAGGGAGCCATGCTGATGCCAGGGTGAAGAGGACTCTGGTAGTTTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR CAA 72 bp | CACCCTGGCATCAGCATGGCTCCCTGCTCATTTCTCTaGGGCTCCCCTCAACACCCCTGCTCGTCTCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: HPGISMAPCSFL*GSPQHPCSSQT Trigger: TGTTTGAGACGAGCAGGGGTGTTGAGGGGAGCCCAAGAGAAATGAGCAGGGAGCCATGCTGATGCCAGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR TCA 90 bp | CACCATCTGTGCACACATGTACCCCACCTGACACTATGGTGGCCACACCCCGGGCATACACCTCCACCTTaGTGGTCCTGTCATAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HHLCTHVPHLTLWWPHPGHTPPP*WSCHSL Trigger: GAGACTATGACAGGACCATCAAGGTGGAGGTGTATG...CCCGGGGTGTGGCCACCATAGTGTCAGGTGGGGTACATGTGTGCACAGATGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR GCA 90 bp | GGCTGTGTGTGGAATGGATGTACCCTCAGGATGGCTCAGGAAACGCTGGACCACTGTCATAGTCTCCGTTaGACAGAGCCCTCACGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GCVWNGCTLRMAQETLDHCHSLR*TEPSRG Trigger: TCCCCGTGAGGGCTCTGTGCAACGGAGACTATGACA...GTGGTCCAGCGTTTCCTGAGCCATCCTGAGGGTACATCCATTCCACACACAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR GCA 90 bp | CACCACTCCCATCCCTTCAAGCTGGCTGGCATTGCTACTTTGTGGTGGCTGATTGGTAGGCCTCCAGGATaGCATCGATGCCACAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HHSHPFKLAGIATLWWLIGRPPG*HRCHSR Trigger: CCTGCTGTGGCATCGATGGCATCCTGGAGGCCTACC...AATCAGCCACCACAAAGTAGCAATGCCAGCCAGCTTGAAGGGATGGGAGTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR GCA 90 bp | GTTTCTTTTTCTAAGGTGGGTGGGAAGAGCCTCTTTCAAGGCCAGCTCCTTCTCGCGGGCGTGGGCGGATaGCCTGTGCCTTCATGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSFSKVGGKSLFQGQLLLAGVGG*PVPSCR Trigger: CCTACATGAAGGCACAGGGCATCCGCCCACGCCCGC...GAGAAGGAGCTGGCCTTGAAAGAGGCTCTTCCCACCCACCTTAGAAAAAGAAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR CCA 90 bp | GGCTGTGTGTGGAATGGATGTACCCTCAGGATGGCTCAGGAAACGCTGGACCACTCCCCAATGAAGTCATaGCTGCCGTCACGATCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GCVWNGCTLRMAQETLDHSPMKS*LPSRSQ Trigger: CTGGGATCGTGACGGCAGCCATGACTTCATTGGGGA...GTGGTCCAGCGTTTCCTGAGCCATCCTGAGGGTACATCCATTCCACACACAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR CAA 72 bp | AGATGCCTTGCCATGAACCACAAGGCCCTGTGCATTTaGGCCTCCACCCTGACCCCATCGCCTGCATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RCLAMNHKALCI*ASTLTPSPAFS Trigger: AGAGAATGCAGGCGATGGGGTCAGGGTGGAGGCCAAAATGCACAGGGCCTTGTGGTTCATGGCAAGGCATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR TCA 90 bp | GTTTCTTTTTCTAAGGTGGGTGGGAAGAGCCTCTTTCAAGGCCAGCTCCTTCTCAGGAGTCGAACTCGCTaGGCGACGCCATGTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VSFSKVGGKSLFQGQLLLRSRTR*ATPCPR Trigger: CCGAGGACATGGCGTCGCTCAGCGAGTTCGACTCCT...GAGAAGGAGCTGGCCTTGAAAGAGGCTCTTCCCACCCACCTTAGAAAAAGAAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR CCA 90 bp | CTGCCTAGAGGGCTGATGGGACAGCGTGCGCAGTATGTGCTGTGCGCATGCGCGGTACATGACACACAGTaGGTCAGACTTGGAAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: LPRGLMGQRAQYVLCACAVHDTQ*VRLGKH Trigger: ATGTTTTCCAAGTCTGACCCACTGTGTGTCATGTAC...CGCGCATGCGCACAGCACATACTGCGCACGCTGTCCCATCAGCCCTCTAGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR CCA 90 bp | CTATACTTTCCCATGGCGCCCAAGGAGATGGAAAATAGGCTGCTGGTTATGGGAGATCCAGGAGGTGAGTaGGCTGGGGACTGTGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LYFPMAPKEMENRLLVMGDPGGE*AGDCGG Trigger: ACCCCCACAGTCCCCAGCCCACTCACCTCCTGGATC...TCCCATAACCAGCAGCCTATTTTCCATCTCCTTGGGCGCCATGGGAAAGTATAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR TCA 90 bp | CACCACTCCCATCCCTTCAAGCTGGCTGGCATTGCTACTTTGTGGTGGCTGATTGCGTTCCTGGCTACGTaGGTGACAACAGGAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HHSHPFKLAGIATLWWLIAFLAT*VTTGAK Trigger: CTTTGCTCCTGTTGTCACTCACGTAGCCAGGAACGC...AATCAGCCACCACAAAGTAGCAATGCCAGCCAGCTTGAAGGGATGGGAGTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR GCA 90 bp | GGCTGTGTGTGGAATGGATGTACCCTCAGGATGGCTCAGGAAACGCTGGACCACTTGTTGGCACAGAACTaGATTGTGGCCACATCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GCVWNGCTLRMAQETLDHLLAQN*IVATSL Trigger: CAGGGATGTGGCCACAATGCAGTTCTGTGCCAACAA...GTGGTCCAGCGTTTCCTGAGCCATCCTGAGGGTACATCCATTCCACACACAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR GCA 90 bp | GGCAACCATGCCTCCATCACAGTCCCTGATGGCTCACAGACTCTGCTTACATATTGGGCGGATGCCCTGTaGCTTCATGTAGGACACCAG | + |
|
Preference number: 4 (lower is better) Translates to: GNHASITVPDGSQTLLTYWADAL*LHVGHQ Trigger: CTGGTGTCCTACATGAAGGCACAGGGCATCCGCCCA...ATATGTAAGCAGAGTCTGTGAGCCATCAGGGACTGTGATGGAGGCATGGTTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR TCA 90 bp | CCCAAACTACCAGAGTCCTCTTCACCCTGGCATCAGCATGGCTCCCTGCTCATTTCCCTTGAGTGTACATaGCACACAGTGGGTCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: PKLPESSSPWHQHGSLLISLECT*HTVGQT Trigger: AGTCTGACCCACTGTGTGTCATGTACACTCAAGGGA...AATGAGCAGGGAGCCATGCTGATGCCAGGGTGAAGAGGACTCTGGTAGTTTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| CDS-3UTR CCA 90 bp | GGCAACCATGCCTCCATCACAGTCCCTGATGGCTCACAGACTCTGCTTACATATCAGGAGGGGTTCTCCTaGTTGCCATTCAGGGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GNHASITVPDGSQTLLTYQEGFS*LPFRGN Trigger: GTTTCCCCTGAATGGCAACCAGGAGAACCCCTCCTG...ATATGTAAGCAGAGTCTGTGAGCCATCAGGGACTGTGATGGAGGCATGGTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| CDS-3UTR TCA 90 bp | CACCACTCCCATCCCTTCAAGCTGGCTGGCATTGCTACTTTGTGGTGGCTGATTCAGGAAGGTACTCTCTaGCTCTACCGCAAAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HHSHPFKLAGIATLWWLIQEGTL*LYRKGK Trigger: CTTTCCTTTGCGGTAGAGTCAGAGAGTACCTTCCTG...AATCAGCCACCACAAAGTAGCAATGCCAGCCAGCTTGAAGGGATGGGAGTGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| CDS-3UTR GCA 90 bp | CTATACTTTCCCATGGCGCCCAAGGAGATGGAAAATAGGCTGCTGGTTATGGGATGCTCAGTACGTGGTTaGCGGTGCGGTCCACATAGT | + |
|
Preference number: 4 (lower is better) Translates to: LYFPMAPKEMENRLLVMGCSVRG*RCGPHS Trigger: ACTATGTGGACCGCACCGGCAACCACGTACTGAGCA...TCCCATAACCAGCAGCCTATTTTCCATCTCCTTGGGCGCCATGGGAAAGTATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| CDS-3UTR CCA 90 bp | CTCCCATGCTCCACATTGGTGAAGGCCCTGACCTGTAGAAAGGGACCACGGAAGACAGTGGGTCAGACTTaGAAAACATGTCTTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPCSTLVKALTCRKGPRKTVGQT*KTCLCP Trigger: TGGACAAAGACATGTTTTCCAAGTCTGACCCACTGT...CTTCCGTGGTCCCTTTCTACAGGTCAGGGCCTTCACCAATGTGGAGCATGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| CDS-3UTR CCA 90 bp | CTATACTTTCCCATGGCGCCCAAGGAGATGGAAAATAGGCTGCTGGTTATGGGACACAGAACTGCATTGTaGCCACATCCCTGCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LYFPMAPKEMENRLLVMGHRTAL*PHPCSC Trigger: GCAACTGCAGGGATGTGGCCACAATGCAGTTCTGTG...TCCCATAACCAGCAGCCTATTTTCCATCTCCTTGGGCGCCATGGGAAAGTATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| CDS-3UTR CCA 90 bp | CTATACTTTCCCATGGCGCCCAAGGAGATGGAAAATAGGCTGCTGGTTATGGGATGTAGTGGAGGGACGTaGACTGTGAGGGATTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LYFPMAPKEMENRLLVMGCSGGT*TVRDSH Trigger: ATGGGAATCCCTCACAGTCCACGTCCCTCCACTACA...TCCCATAACCAGCAGCCTATTTTCCATCTCCTTGGGCGCCATGGGAAAGTATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| CDS-3UTR TCA 90 bp | TTCTCTTGGGCTCCCCTCAACACCCCTGCTCGTCTCAAACATCTCTCTACTGGATTGTTCTCCATCCCTTaGGTGTACATGACACACAGT | + |
|
Preference number: 4 (lower is better) Translates to: FSWAPLNTPARLKHLSTGLFSIP*VYMTHS Trigger: ACTGTGTGTCATGTACACTCAAGGGATGGAGAACAA...TCCAGTAGAGAGATGTTTGAGACGAGCAGGGGTGTTGAGGGGAGCCCAAGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
||
| CDS-3UTR TCA 90 bp | CTATACTTTCCCATGGCGCCCAAGGAGATGGAAAATAGGCTGCTGGTTATGGGACCTCTGCAGACAGGATaGTGGTACCACATTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LYFPMAPKEMENRLLVMGPLQTG*WYHISS Trigger: GGAAGAAATGTGGTACCATCATCCTGTCTGCAGAGG...TCCCATAACCAGCAGCCTATTTTCCATCTCCTTGGGCGCCATGGGAAAGTATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR TCA 90 bp | CTATACTTTCCCATGGCGCCCAAGGAGATGGAAAATAGGCTGCTGGTTATGGGATCACCTCATAGATGTTaGACTGACTCTGGCCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: LYFPMAPKEMENRLLVMGSPHRC*TDSGHV Trigger: CACGTGGCCAGAGTCAGTTCAACATCTATGAGGTGA...TCCCATAACCAGCAGCCTATTTTCCATCTCCTTGGGCGCCATGGGAAAGTATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR CAA 72 bp | CTCTGCACAGGCCTGGAATGGATTCTCAGTAGATGTTaGTTGAGAGATGAAGAAACCATGATCCACGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LCTGLEWILSRC*LRDEETMIHGD Trigger: ATCACCGTGGATCATGGTTTCTTCATCTCTCAACAAACATCTACTGAGAATCCATTCCAGGCCTGTGCAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR CAA 72 bp | AGGAAGGCTTGTACCTACTGTCATTCTCTAGACAGCTaGTTTAGCTTAGCATTACCAGTTACGCACATACAG | + |
|
Preference number: 4 (lower is better) Translates to: RKACTYCHSLDS*FSLALPVTHIQ Trigger: CTGTATGTGCGTAACTGGTAATGCTAAGCTAAACAAGCTGTCTAGAGAATGACAGTAGGTACAAGCCTTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| 3UTR CAA 72 bp | CCTTATACTCTTTGGATGTGGTCTCAAATTCTATTTTaGGCCCTGGAACAAGGAAGGCTTGTACCTACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PYTLWMWSQILF*ALEQGRLVPTV Trigger: GACAGTAGGTACAAGCCTTCCTTGTTCCAGGGCCAAAAATAGAATTTGAGACCACATCCAAAGAGTATAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS GCA 90 bp | GTGGGGGTGACTGAGCGGGTGCAGCAGGTGGCGGGCGTGGGCGGATaGCCTGTGCCTTCATGTAGGACACCAGTTGGTCCGGAATCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VGVTERVQQVAGVGG*PVPSCRTPVGPESQ Trigger: CTGAGATTCCGGACCAACTGGTGTCCTACATGAAGGCACAGGGCATCCGCCCACGCCCGCCACCTGCTGCACCCGCTCAGTCACCCCCAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR CAA 90 bp | CCTCAGGGGCAGCGGCTCGCTGTCTGGACTCCCCTGCTGGGTACCCATCTCCTCTTCTTATCCAGCTTGTaGGCACAGAACTGCATTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PQGQRLAVWTPLLGTHLLFLSSL*AQNCIV Trigger: CACAATGCAGTTCTGTGCCAACAAGCTGGATAAGAA...GAGGAGATGGGTACCCAGCAGGGGAGTCCAGACAGCGAGCCGCTGCCCCTGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR CAA 90 bp | TTCTCTTGGGCTCCCCTCAACACCCCTGCTCGTCTCAAACATCTCTCTACTGGAACCGTGATCTCCACCTaGGTAGCCGGGATGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: FSWAPLNTPARLKHLSTGTVIST*VAGMLP Trigger: GGGCAGCATCCCGGCTACCAAGGTGGAGATCACGGT...TCCAGTAGAGAGATGTTTGAGACGAGCAGGGGTGTTGAGGGGAGCCCAAGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR CAA 90 bp | CACCATCTGTGCACACATGTACCCCACCTGACACTATGGTGGCCACACCCCGGGTTGCCTGTCCGGGAGTaGAGGCTGAATGTTCCTATC | + |
|
Preference number: 5 (lower is better) Translates to: HHLCTHVPHLTLWWPHPGLPVRE*RLNVPI Trigger: GATAGGAACATTCAGCCTCAACTCCCGGACAGGCAA...CCCGGGGTGTGGCCACCATAGTGTCAGGTGGGGTACATGTGTGCACAGATGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR CAA 90 bp | CTCCCATGCTCCACATTGGTGAAGGCCCTGACCTGTAGAAAGGGACCACGGAAGGCCACATCCCTGCAGTaGCTCAGTTCCTCTGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LPCSTLVKALTCRKGPRKATSLQ*LSSSAD Trigger: GTCTGCAGAGGAACTGAGCAACTGCAGGGATGTGGC...CTTCCGTGGTCCCTTTCTACAGGTCAGGGCCTTCACCAATGTGGAGCATGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR CAA 90 bp | GCCCTGCAGGTGAGTGGCCCCCAAGTTGAGCAGGAGACATCTCAGTGCTACAAGCATGTAGGACACCAGTaGGTCCGGAATCTCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALQVSGPQVEQETSQCYKHVGHQ*VRNLSQ Trigger: CTGGCTGAGATTCCGGACCAACTGGTGTCCTACATG...CTTGTAGCACTGAGATGTCTCCTGCTCAACTTGGGGGCCACTCACCTGCAGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS CCA 90 bp | CGGCTCCCAGAGGACCCTACAATTTCTCCAAGGGTACAGAAGGCCTaGCCCAGGAAGTCGTGTTTAGATAGATCCGGGCTCTTGGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RLPEDPTISPRVQKA*PRKSCLDRSGLLES Trigger: TGACTCCAAGAGCCCGGATCTATCTAAACACGACTTCCTGGGCCAGGCCTTCTGTACCCTTGGAGAAATTGTAGGGTCCTCTGGGAGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024805.15 ENSMUST00000137727.3 |
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| CDS-3UTR CAA 90 bp | CCCAAACTACCAGAGTCCTCTTCACCCTGGCATCAGCATGGCTCCCTGCTCATTTCCGAACTCTCGCCATaGCTTGTTCTCCATCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PKLPESSSPWHQHGSLLISELSP*LVLHPL Trigger: CAAGGGATGGAGAACAAGCAATGGCGAGAGTTCGGA...AATGAGCAGGGAGCCATGCTGATGCCAGGGTGAAGAGGACTCTGGTAGTTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR CAA 90 bp | CACCACTCCCATCCCTTCAAGCTGGCTGGCATTGCTACTTTGTGGTGGCTGATTGAGGGGTTCTCCTGGTaGCCATTCAGGGGAAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: HHSHPFKLAGIATLWWLIEGFSW*PFRGNS Trigger: TGAGTTTCCCCTGAATGGCAACCAGGAGAACCCCTC...AATCAGCCACCACAAAGTAGCAATGCCAGCCAGCTTGAAGGGATGGGAGTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR CAA 90 bp | CTCCCATGCTCCACATTGGTGAAGGCCCTGACCTGTAGAAAGGGACCACGGAAGCACAGTGGGTCAGACTaGGAAAACATGTCTTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPCSTLVKALTCRKGPRKHSGSD*ENMSLS Trigger: GGACAAAGACATGTTTTCCAAGTCTGACCCACTGTG...CTTCCGTGGTCCCTTTCTACAGGTCAGGGCCTTCACCAATGTGGAGCATGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR CAA 90 bp | CTATACTTTCCCATGGCGCCCAAGGAGATGGAAAATAGGCTGCTGGTTATGGGAGTTTGCCACACCGGGTaGAGGGTGTTCTTCATGACC | + |
|
Preference number: 5 (lower is better) Translates to: LYFPMAPKEMENRLLVMGVCHTG*RVFFMT Trigger: GGTCATGAAGAACACCCTCAACCCGGTGTGGCAAAC...TCCCATAACCAGCAGCCTATTTTCCATCTCCTTGGGCGCCATGGGAAAGTATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS TCA 90 bp | GTTGATCTGCGTCCCTCCTTTGATGTAATCCAGGAAGGTACTCTCTaGCTCTACCGCAAAGGAAAGCAGGGTGACCGTGCCAGAATTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VDLRPSFDVIQEGTL*LYRKGKQGDRARIH Trigger: GTGAATTCTGGCACGGTCACCCTGCTTTCCTTTGCGGTAGAGTCAGAGAGTACCTTCCTGGATTACATCAAAGGAGGGACGCAGATCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR CAA 90 bp | TTCTCTTGGGCTCCCCTCAACACCCCTGCTCGTCTCAAACATCTCTCTACTGGACTTGTTCTCCATCCCTaGAGTGTACATGACACACAG | + |
|
Preference number: 5 (lower is better) Translates to: FSWAPLNTPARLKHLSTGLVLHP*SVHDTQ Trigger: CTGTGTGTCATGTACACTCAAGGGATGGAGAACAAG...TCCAGTAGAGAGATGTTTGAGACGAGCAGGGGTGTTGAGGGGAGCCCAAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR CAA 90 bp | CACCACTCCCATCCCTTCAAGCTGGCTGGCATTGCTACTTTGTGGTGGCTGATTTCTTTCTTATCCAGCTaGTTGGCACAGAACTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: HHSHPFKLAGIATLWWLISFLSS*LAQNCI Trigger: AATGCAGTTCTGTGCCAACAAGCTGGATAAGAAAGA...AATCAGCCACCACAAAGTAGCAATGCCAGCCAGCTTGAAGGGATGGGAGTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR CAA 90 bp | GGCCCTGGAACAAGGAAGGCTTGTACCTACTGTCATTCTCTAGACAGCTTGTTTTTTACAATTGCCTCCTaGGTCTGTGCCATGTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: GPGTRKACTYCHSLDSLFFTIAS*VCAMSE Trigger: CTCGGACATGGCACAGACCAAGGAGGCAATTGTAAA...AAACAAGCTGTCTAGAGAATGACAGTAGGTACAAGCCTTCCTTGTTCCAGGGCC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS-3UTR CAA 90 bp | GGCCCTGGAACAAGGAAGGCTTGTACCTACTGTCATTCTCTAGACAGCTTGTTTTTGGAAAACATGTCTTaGTCCAAGAGGTTCCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GPGTRKACTYCHSLDSLFLENMS*SKRFLH Trigger: ATGCAGGAACCTCTTGGACAAAGACATGTTTTCCAA...AAACAAGCTGTCTAGAGAATGACAGTAGGTACAAGCCTTCCTTGTTCCAGGGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS GCA 72 bp | ACTGAGCGGGTGCAGCAGGTGGCGGGCGTGGGCGGATaGCCTGTGCCTTCATGTAGGACACCAGTTGGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: TERVQQVAGVGG*PVPSCRTPVGP Trigger: CGGACCAACTGGTGTCCTACATGAAGGCACAGGGCATCCGCCCACGCCCGCCACCTGCTGCACCCGCTCAGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS CAA 90 bp | TGGCGGGCGTGGGCGGATGCCCTGTGCCTTCATGTAGGACACCAGTaGGTCCGGAATCTCAGCCAGAACATCCCGGGCCAGGCGGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: WRAWADALCLHVGHQ*VRNLSQNIPGQAGH Trigger: ATGGCCCGCCTGGCCCGGGATGTTCTGGCTGAGATTCCGGACCAACTGGTGTCCTACATGAAGGCACAGGGCATCCGCCCACGCCCGCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS GCA 72 bp | GCACGGTGCGCAGGCTGCTGTGGTAGGCCTCCAGGATaGCATCGATGCCACAGCAGGAGGGGTTCTCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: ARCAGCCGRPPG*HRCHSRRGSPG Trigger: ACCAGGAGAACCCCTCCTGCTGTGGCATCGATGGCATCCTGGAGGCCTACCACAGCAGCCTGCGCACCGTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS GCA 72 bp | GGGTGCAGCAGGTGGCGGGCGTGGGCGGATGCCCTGTaGCTTCATGTAGGACACCAGTTGGTCCGGAATCTC | + |
|
Preference number: 6 (lower is better) Translates to: GCSRWRAWADAL*LHVGHQLVRNL Trigger: GAGATTCCGGACCAACTGGTGTCCTACATGAAGGCACAGGGCATCCGCCCACGCCCGCCACCTGCTGCACCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS CAA 72 bp | TGGGCGGATGCCCTGTGCCTTCATGTAGGACACCAGTaGGTCCGGAATCTCAGCCAGAACATCCCGGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: WADALCLHVGHQ*VRNLSQNIPGQ Trigger: CTGGCCCGGGATGTTCTGGCTGAGATTCCGGACCAACTGGTGTCCTACATGAAGGCACAGGGCATCCGCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS GCA 72 bp | TGCCATCGATGCCACAGCAGGAGGGGTTCTCCTGGTTaGCATTCAGGGGAAACTCATGGGACACCCTGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: CHRCHSRRGSPG*HSGETHGTPCR Trigger: ACGGCAGGGTGTCCCATGAGTTTCCCCTGAATGGCAACCAGGAGAACCCCTCCTGCTGTGGCATCGATGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS CAA 72 bp | TCCAAGAGGTTCCTGCATGACACCGTGATCTCCACCTaGGTAGCCGGGATGCTGCCCGCCAAGGAGTCGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SKRFLHDTVIST*VAGMLPAKESN Trigger: GTTCGACTCCTTGGCGGGCAGCATCCCGGCTACCAAGGTGGAGATCACGGTGTCATGCAGGAACCTCTTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024805.15 ENSMUST00000137727.3 |
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| CDS CAA 72 bp | ATGCCATCGATGCCACAGCAGGAGGGGTTCTCCTGGTaGCCATTCAGGGGAAACTCATGGGACACCCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: MPSMPQQEGFSW*PFRGNSWDTLP Trigger: CGGCAGGGTGTCCCATGAGTTTCCCCTGAATGGCAACCAGGAGAACCCCTCCTGCTGTGGCATCGATGGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS CAA 90 bp | ATGTCTTTGTCCAAGAGGTTCCTGCATGACACCGTGATCTCCACCTaGGTAGCCGGGATGCTGCCCGCCAAGGAGTCGAACTCGCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: MSLSKRFLHDTVIST*VAGMLPAKESNSLS Trigger: GCTCAGCGAGTTCGACTCCTTGGCGGGCAGCATCCCGGCTACCAAGGTGGAGATCACGGTGTCATGCAGGAACCTCTTGGACAAAGACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024805.15 ENSMUST00000137727.3 |
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| CDS CCA 72 bp | AGGATGCCATCGATGCCACAGCAGGAGGGGTTCTCCTaGTTGCCATTCAGGGGAAACTCATGGGACACCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RMPSMPQQEGFS*LPFRGNSWDTL Trigger: CAGGGTGTCCCATGAGTTTCCCCTGAATGGCAACCAGGAGAACCCCTCCTGCTGTGGCATCGATGGCATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS CCA 72 bp | TCACCGTCCAGCTCCACCATGGCATCGAACTCGGCCTaGCCCACGCCAACAATGATGATCGACATAGGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: SPSSSTMASNSA*PTPTMMIDIGS Trigger: ACTCCCTATGTCGATCATCATTGTTGGCGTGGGCCAGGCCGAGTTCGATGCCATGGTGGAGCTGGACGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS TCA 72 bp | TCAGTACGTGGTTGCCGGTGCGGTCCACATAGTCCCTaGAGGGCACAAACTGGACAATGTCTCGCTCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SVRGCRCGPHSP*RAQTGQCLAQP Trigger: TGGCTGAGCGAGACATTGTCCAGTTTGTGCCCTTCAGGGACTATGTGGACCGCACCGGCAACCACGTACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS CCA 72 bp | TCTTCCCTGGGACACCACCGGAAGCTTCCGGACCAGTaGTTCTGGAGCTTTCCATCCAAAGACCACTTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: SSLGHHRKLPDQ*FWSFPSKDHFR Trigger: ACGGAAGTGGTCTTTGGATGGAAAGCTCCAGAACCACTGGTCCGGAAGCTTCCGGTGGTGTCCCAGGGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137727.3 |
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| CDS CAA 72 bp | TTAGACACGGCGGGCATAGGCTTGCCTGTCCGGGAGTaGAGGCTGAATGTTCCTATCGTGAGAGGCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LDTAGIGLPVRE*RLNVPIVRGFS Trigger: GGAGAAGCCTCTCACGATAGGAACATTCAGCCTCAACTCCCGGACAGGCAAGCCTATGCCCGCCGTGTCTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024805.15 ENSMUST00000137727.3 |
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| CDS TCA 72 bp | CGTCCCTCCTTTGATGTAATCCAGGAAGGTACTCTCTaGCTCTACCGCAAAGGAAAGCAGGGTGACCGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: RPSFDVIQEGTL*LYRKGKQGDRA Trigger: GGCACGGTCACCCTGCTTTCCTTTGCGGTAGAGTCAGAGAGTACCTTCCTGGATTACATCAAAGGAGGGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS CCA 72 bp | GAGGACCCTACAATTTCTCCAAGGGTACAGAAGGCCTaGCCCAGGAAGTCGTGTTTAGATAGATCCGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: EDPTISPRVQKA*PRKSCLDRSGL Trigger: GAGCCCGGATCTATCTAAACACGACTTCCTGGGCCAGGCCTTCTGTACCCTTGGAGAAATTGTAGGGTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024805.15 ENSMUST00000137727.3 |
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| CDS CAA 72 bp | GCGTCCGAACTCTCGCCATTGCTTGTTCTCCATCCCTaGAGTGTACATGACACACAGTGGGTCAGACTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: ASELSPLLVLHP*SVHDTQWVRLG Trigger: TCCAAGTCTGACCCACTGTGTGTCATGTACACTCAAGGGATGGAGAACAAGCAATGGCGAGAGTTCGGACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024805.15 ENSMUST00000137727.3 |
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| CDS TCA 72 bp | CGTCCGAACTCTCGCCATTGCTTGTTCTCCATCCCTTaGGTGTACATGACACACAGTGGGTCAGACTTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: RPNSRHCLFSIP*VYMTHSGSDLE Trigger: TTCCAAGTCTGACCCACTGTGTGTCATGTACACTCAAGGGATGGAGAACAAGCAATGGCGAGAGTTCGGACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024805.15 ENSMUST00000137727.3 |
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| CDS CAA 72 bp | TGGCCCACGCCAACAATGATGATCGACATAGGGAGTTaGGCAGCATTTACAATTGCCTCCTTGGTCTGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: WPTPTMMIDIGS*AAFTIASLVCA Trigger: GGCACAGACCAAGGAGGCAATTGTAAATGCTGCCAAACTCCCTATGTCGATCATCATTGTTGGCGTGGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024805.15 |
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| CDS CAA 72 bp | GTTATCTATGACCTCGGTGCGTCCGAACTCTCGCCATaGCTTGTTCTCCATCCCTTGAGTGTACATGACACA | + |
|
Preference number: 6 (lower is better) Translates to: VIYDLGASELSP*LVLHPLSVHDT Trigger: TGTGTCATGTACACTCAAGGGATGGAGAACAAGCAATGGCGAGAGTTCGGACGCACCGAGGTCATAGATAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024805.15 ENSMUST00000137727.3 |
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| CDS CAA 90 bp | ACCAAGAAGGGGTCAGATTTCCCGAAGAAATCTTTCTTATCCAGCTaGTTGGCACAGAACTGCATTGTGGCCACATCCCTGCAGTTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TKKGSDFPKKSFLSS*LAQNCIVATSLQLL Trigger: GAGCAACTGCAGGGATGTGGCCACAATGCAGTTCTGTGCCAACAAGCTGGATAAGAAAGATTTCTTCGGGAAATCTGACCCCTTCTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024805.15 ENSMUST00000137727.3 |
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| CDS CAA 72 bp | GGGTCAGATTTCCCGAAGAAATCTTTCTTATCCAGCTaGTTGGCACAGAACTGCATTGTGGCCACATCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GSDFPKKSFLSS*LAQNCIVATSL Trigger: CAGGGATGTGGCCACAATGCAGTTCTGTGCCAACAAGCTGGATAAGAAAGATTTCTTCGGGAAATCTGACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024805.15 ENSMUST00000137727.3 |
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| CDS CAA 90 bp | AAGAAGGGGTCAGATTTCCCGAAGAAATCTTTCTTATCCAGCTTGTaGGCACAGAACTGCATTGTGGCCACATCCCTGCAGTTGCTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: KKGSDFPKKSFLSSL*AQNCIVATSLQLLS Trigger: ACTGAGCAACTGCAGGGATGTGGCCACAATGCAGTTCTGTGCCAACAAGCTGGATAAGAAAGATTTCTTCGGGAAATCTGACCCCTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024805.15 ENSMUST00000137727.3 |
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| CDS CAA 72 bp | TCAGATTTCCCGAAGAAATCTTTCTTATCCAGCTTGTaGGCACAGAACTGCATTGTGGCCACATCCCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SDFPKKSFLSSL*AQNCIVATSLQ Trigger: CTGCAGGGATGTGGCCACAATGCAGTTCTGTGCCAACAAGCTGGATAAGAAAGATTTCTTCGGGAAATCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024805.15 ENSMUST00000137727.3 |
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