Pregenerated sensors for CPNE3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028228Ensembl transcript IDs: ENSMUST00000029885.5
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGGCCAGACACATAAAACACAGCAGCAGAAGATCAGTGAGGCCCTaGGTCTACTCTGGGAAAGCTGACAGAGCCCTGTCTAAAGTGAAT | + |
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Preference number: 1 (lower is better) Translates to: KARHIKHSSRRSVRP*VYSGKADRALSKVN Trigger: ATTCACTTTAGACAGGGCTCTGTCAGCTTTCCCAGAGTAGACCCAGGGCCTCACTGATCTTCTGCTGCTGTGTTTTATGTGTCTGGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR TCA 90 bp | CTATCAGATCCCCTGAAGCTGGAGTTACAGCCAAGTAGAGCTGCCTaGTGTATGTGCTGGAAATCAATAGGTTCTCTGCAAGAGAACTGT | + |
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Preference number: 1 (lower is better) Translates to: LSDPLKLELQPSRAA*CMCWKSIGSLQENC Trigger: ACAGTTCTCTTGCAGAGAACCTATTGATTTCCAGCACATACATCAGGCAGCTCTACTTGGCTGTAACTCCAGCTTCAGGGGATCTGATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR CCA 90 bp | ATTTTTCTTTGTTATTCTGAAACACATTCTCATTGGGTAGCTGGCTaGCCTGGAATTAACTATGTAAGTGGGTTGGCTTGTGCTGGCCCT | + |
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Preference number: 1 (lower is better) Translates to: IFLCYSETHSHWVAG*PGINYVSGLACAGP Trigger: AGGGCCAGCACAAGCCAACCCACTTACATAGTTAATTCCAGGCCAGCCAGCTACCCAATGAGAATGTGTTTCAGAATAACAAAGAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR TCA 90 bp | CATGTGGCCTCTGGGATGACCTATCATTTGATGCCCACAGAAGTTTaGGTGTCTTGTTTACTCAGTAAAGCAAAGGCCATATATGTACAA | + |
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Preference number: 1 (lower is better) Translates to: HVASGMTYHLMPTEV*VSCLLSKAKAIYVQ Trigger: TTGTACATATATGGCCTTTGCTTTACTGAGTAAACAAGACACTCAAACTTCTGTGGGCATCAAATGATAGGTCATCCCAGAGGCCACATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR GCA 90 bp | AAGTCTAACAAAAATTGTTCACTTTGTTTTGTGTGTGTGTGTATGTaGACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACAC | + |
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Preference number: 1 (lower is better) Translates to: KSNKNCSLCFVCVCM*TLSLSLSLSLSHTH Trigger: GTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGCACATACACACACACACAAAACAAAGTGAACAATTTTTGTTAGACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR CCA 90 bp | TCTCAATTACTTATTTTTCTTTGTTATTCTGAAACACATTCTCATTaGGTAGCTGGCTGGCCTGGAATTAACTATGTAAGTGGGTTGGCT | + |
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Preference number: 1 (lower is better) Translates to: SQLLIFLCYSETHSH*VAGWPGINYVSGLA Trigger: AGCCAACCCACTTACATAGTTAATTCCAGGCCAGCCAGCTACCCAATGAGAATGTGTTTCAGAATAACAAAGAAAAATAAGTAATTGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR TCA 90 bp | AGAGACAGAATAGAGAGTCACAGGTACAAACTCAGTACCTCACTTTaGTTGACTTGCAAAATATTTACTATAAACAGTATAGCAACCTGT | + |
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Preference number: 1 (lower is better) Translates to: RDRIESHRYKLSTSL*LTCKIFTINSIATC Trigger: ACAGGTTGCTATACTGTTTATAGTAAATATTTTGCAAGTCAATCAAAGTGAGGTACTGAGTTTGTACCTGTGACTCTCTATTCTGTCTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR-3UTR GCA 90 bp | GCTGTTTCTGAGAAGCCTGCAGAAAACAAAGACTCAGGCAGTGGTGGCAGGACTAATGCTCAGATGATGTaGCACCATGTCTGGCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: AVSEKPAENKDSGSGGRTNAQMM*HHVWPA Trigger: TGCAGGCCAGACATGGTGGCACATCATCTGAGCATT...AGTCCTGCCACCACTGCCTGAGTCTTTGTTTTCTGCAGGCTTCTCAGAAACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR-3UTR CCA 90 bp | ACACACACACACACACACACACACACACACACAAGCAGGTCCTCACGGAGGGCATGTCCACTGGTTGAGTaGACATTTTCAAAACGGAGT | + |
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Preference number: 2 (lower is better) Translates to: THTHTHTHTHTSRSSRRACPLVE*TFSKRS Trigger: ACTCCGTTTTGAAAATGTCCACTCAACCAGTGGACA...TGCCCTCCGTGAGGACCTGCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR-3UTR CCA 90 bp | CTAATGCATTTCTGGGCTGGCTCCCTCTGTATGCAAAAGAAAGTCCTAAAAGCCAGACTCAGGCAGTGGTaGCAGGACTCAGTAACACGG | + |
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Preference number: 2 (lower is better) Translates to: LMHFWAGSLCMQKKVLKARLRQW*QDSVTR Trigger: CCGTGTTACTGAGTCCTGCCACCACTGCCTGAGTCT...GGCTTTTAGGACTTTCTTTTGCATACAGAGGGAGCCAGCCCAGAAATGCATTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR-3UTR TCA 90 bp | CTAATGCATTTCTGGGCTGGCTCCCTCTGTATGCAAAAGAAAGTCCTAAAAGCCGCTCCACACAGCTTTTaGAATCCTGCAGCTGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: LMHFWAGSLCMQKKVLKAAPHSF*NPAAVL Trigger: CAGGACAGCTGCAGGATTTCAAAAGCTGTGTGGAGC...GGCTTTTAGGACTTTCTTTTGCATACAGAGGGAGCCAGCCCAGAAATGCATTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR-3UTR CCA 90 bp | AGCAGGCGCATTTTGCACTACACTGCTGCCATGTCACACAACAACAATAAACACTTACATCATATAGCCTaGGGTAAGAAGCGCAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: SRRILHYTAAMSHNNNKHLHHIA*GKKRRG Trigger: CCCTCTGCGCTTCTTACCCCAGGCTATATGATGTAA...GTGTTTATTGTTGTTGTGTGACATGGCAGCAGTGTAGTGCAAAATGCGCCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR-3UTR CCA 90 bp | AAAACAAAGACTCAGGCAGTGGTGGCAGGACTCAGTAACACGGACAGGAATGCTTACACTGAGCAGAAATaGACTTGCTACTGTCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: KTKTQAVVAGLSNTDRNAYTEQK*TCYCPL Trigger: AAGAGGACAGTAGCAAGTCCATTTCTGCTCAGTGTA...AGCATTCCTGTCCGTGTTACTGAGTCCTGCCACCACTGCCTGAGTCTTTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR-3UTR CCA 90 bp | CTAATGCATTTCTGGGCTGGCTCCCTCTGTATGCAAAAGAAAGTCCTAAAAGCCGGCAAACAAGACAGGTaGATCTTCTCTGAGCCTAAC | + |
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Preference number: 2 (lower is better) Translates to: LMHFWAGSLCMQKKVLKAGKQDR*IFSEPN Trigger: GTTAGGCTCAGAGAAGATCCACCTGTCTTGTTTGCC...GGCTTTTAGGACTTTCTTTTGCATACAGAGGGAGCCAGCCCAGAAATGCATTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR-3UTR GCA 90 bp | AAAACAAAGACTCAGGCAGTGGTGGCAGGACTCAGTAACACGGACAGGAATGCTGAGCAGAAATGGACTTaGTACTGTCCTCTTCAAAAA | + |
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Preference number: 2 (lower is better) Translates to: KTKTQAVVAGLSNTDRNAEQKWT*YCPLQK Trigger: TTTTTGAAGAGGACAGTAGCAAGTCCATTTCTGCTC...AGCATTCCTGTCCGTGTTACTGAGTCCTGCCACCACTGCCTGAGTCTTTGTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR-3UTR GCA 90 bp | CTAATGCATTTCTGGGCTGGCTCCCTCTGTATGCAAAAGAAAGTCCTAAAAGCCGCGATAACTGGCCACTaGACAGATAGGCAAAGTATT | + |
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Preference number: 2 (lower is better) Translates to: LMHFWAGSLCMQKKVLKAAITGH*TDRQSI Trigger: AATACTTTGCCTATCTGTGCAGTGGCCAGTTATCGC...GGCTTTTAGGACTTTCTTTTGCATACAGAGGGAGCCAGCCCAGAAATGCATTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR CAA 90 bp | GTCAAAACCAAATGTGTAATGAATCTGAGGTGTTTCTGGCAGGGCTaGCCATGTTGTATCACTCAACTTCACTGCAGCCTTGGTTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: VKTKCVMNLRCFWQG*PCCITQLHCSLGCH Trigger: ATGACAACCAAGGCTGCAGTGAAGTTGAGTGATACAACATGGCAAGCCCTGCCAGAAACACCTCAGATTCATTACACATTTGGTTTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR-3UTR TCA 90 bp | ATTTCTGAATATCTGTATGTGAGAAATTGTATGTCTATGCACAGGATGGCCACAATGGGCCTGCAGTTCTaGGCAAGCCTACTGAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: ISEYLYVRNCMSMHRMATMGLQF*ASLLSL Trigger: AAGGCTCAGTAGGCTTGCTCAGAACTGCAGGCCCAT...TGTGGCCATCCTGTGCATAGACATACAATTTCTCACATACAGATATTCAGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR-3UTR TCA 90 bp | AATTGTTCACTTTGTTTTGTGTGTGTGTGTATGTGCACTCTCTCTCTCTCTCTCGAGCTGTCCACTGGTTaGGTGGACATTTTCAAAACG | + |
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Preference number: 2 (lower is better) Translates to: NCSLCFVCVCMCTLSLSLELSTG*VDIFKT Trigger: CGTTTTGAAAATGTCCACTCAACCAGTGGACAGCTC...GAGAGAGAGAGAGAGAGTGCACATACACACACACACAAAACAAAGTGAACAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR-3UTR GCA 90 bp | CTAATGCATTTCTGGGCTGGCTCCCTCTGTATGCAAAAGAAAGTCCTAAAAGCCAACAACAATAAACACTaGCTGACTCAGCAGTGTTAC | + |
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Preference number: 2 (lower is better) Translates to: LMHFWAGSLCMQKKVLKANNNKH*LTQQCY Trigger: GTAACACTGCTGAGTCAGGCAGTGTTTATTGTTGTT...GGCTTTTAGGACTTTCTTTTGCATACAGAGGGAGCCAGCCCAGAAATGCATTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR-3UTR TCA 90 bp | TGTGCCACCATGTCTGGCCTGCAACTCTGTTTGAATTTTCACCTTAAATGTTTGATGCCCACAGAAGTTTaGGTGTCTTGTTTACTCAGT | + |
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Preference number: 2 (lower is better) Translates to: CATMSGLQLCLNFHLKCLMPTEV*VSCLLS Trigger: ACTGAGTAAACAAGACACTCAAACTTCTGTGGGCAT...CAAACATTTAAGGTGAAAATTCAAACAGAGTTGCAGGCCAGACATGGTGGCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR-3UTR GCA 90 bp | ATTTCTGAATATCTGTATGTGAGAAATTGTATGTCTATGCACAGGATGGCCACATCTCTGCCTCCCAAATaGTCAGATGATGTGCCACCA | + |
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Preference number: 2 (lower is better) Translates to: ISEYLYVRNCMSMHRMATSLPPK*SDDVPP Trigger: TGGTGGCACATCATCTGAGCATTTGGGAGGCAGAGA...TGTGGCCATCCTGTGCATAGACATACAATTTCTCACATACAGATATTCAGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR-3UTR GCA 90 bp | CTAATGCATTTCTGGGCTGGCTCCCTCTGTATGCAAAAGAAAGTCCTAAAAGCCTTATATCAGGCTTTATaGCTAACAGAATTCTGGATG | + |
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Preference number: 2 (lower is better) Translates to: LMHFWAGSLCMQKKVLKALYQAL*LTEFWM Trigger: CATCCAGAATTCTGTTAGGCATAAAGCCTGATATAA...GGCTTTTAGGACTTTCTTTTGCATACAGAGGGAGCCAGCCCAGAAATGCATTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR-3UTR GCA 90 bp | AATTGTTCACTTTGTTTTGTGTGTGTGTGTATGTGCACTCTCTCTCTCTCTCTCAATTTTAAGAAACCCTaGCTTATAGAGGTGCATTGC | + |
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Preference number: 2 (lower is better) Translates to: NCSLCFVCVCMCTLSLSLNFKKP*LIEVHC Trigger: GCAATGCACCTCTATAAGGCAGGGTTTCTTAAAATT...GAGAGAGAGAGAGAGAGTGCACATACACACACACACAAAACAAAGTGAACAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR-3UTR TCA 90 bp | ATTTCTGAATATCTGTATGTGAGAAATTGTATGTCTATGCACAGGATGGCCACAAACACCTCTAAACACTaGTGGCATTTTGTACTATGT | + |
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Preference number: 2 (lower is better) Translates to: ISEYLYVRNCMSMHRMATNTSKH*WHFVLC Trigger: ACATAGTACAAAATGCCATCAGTGTTTAGAGGTGTT...TGTGGCCATCCTGTGCATAGACATACAATTTCTCACATACAGATATTCAGAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR CAA 90 bp | AAGAGACAGAATAGAGAGTCACAGGTACAAACTCAGTACCTCACTTaGATTGACTTGCAAAATATTTACTATAAACAGTATAGCAACCTG | + |
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Preference number: 2 (lower is better) Translates to: KRQNRESQVQTQYLT*IDLQNIYYKQYSNL Trigger: CAGGTTGCTATACTGTTTATAGTAAATATTTTGCAAGTCAATCAAAGTGAGGTACTGAGTTTGTACCTGTGACTCTCTATTCTGTCTCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR CAA 90 bp | ATAAATGGTAAAACTGTAAGTCTAACAAAAATTGTTCACTTTGTTTaGTGTGTGTGTGTATGTGCACTCTCTCTCTCTCTCTCTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: INGKTVSLTKIVHFV*CVCVCALSLSLSLS Trigger: AGAGAGAGAGAGAGAGAGAGAGAGTGCACATACACACACACACAAAACAAAGTGAACAATTTTTGTTAGACTTACAGTTTTACCATTTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR TCA 72 bp | TCACGGAGGGCAGAGGAAGGAGACTATCAGATCCCCTaGAGCTGGAGTTACAGCCAAGTAGAGCTGCCTGAT | + |
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Preference number: 3 (lower is better) Translates to: SRRAEEGDYQIP*SWSYSQVELPD Trigger: ATCAGGCAGCTCTACTTGGCTGTAACTCCAGCTTCAGGGGATCTGATAGTCTCCTTCCTCTGCCCTCCGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR TCA 72 bp | AGCTACCACATGGAGATGGAGATGGGCCTGCAGTTCTaGGCAAGCCTACTGAGCCTTGCTGCAGAGCCAAAA | + |
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Preference number: 3 (lower is better) Translates to: SYHMEMEMGLQF*ASLLSLAAEPK Trigger: TTTTGGCTCTGCAGCAAGGCTCAGTAGGCTTGCTCAGAACTGCAGGCCCATCTCCATCTCCATGTGGTAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR CCA 72 bp | CACATAAAACACAGCAGCAGAAGATCAGTGAGGCCCTaGGTCTACTCTGGGAAAGCTGACAGAGCCCTGTCT | + |
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Preference number: 3 (lower is better) Translates to: HIKHSSRRSVRP*VYSGKADRALS Trigger: AGACAGGGCTCTGTCAGCTTTCCCAGAGTAGACCCAGGGCCTCACTGATCTTCTGCTGCTGTGTTTTATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR CCA 72 bp | AGCGCAGAGGGCAGATACATCATTCTGTGTGAGAGATaGCGTTGCTCCACACAGCTTTTGAAATCCTGCAGC | + |
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Preference number: 3 (lower is better) Translates to: SAEGRYIILCER*RCSTQLLKSCS Trigger: GCTGCAGGATTTCAAAAGCTGTGTGGAGCAACGCCATCTCTCACACAGAATGATGTATCTGCCCTCTGCGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR GCA 72 bp | GAGGGCAGATACATCATTCTGTGTGAGAGATGGCGTTaGTCCACACAGCTTTTGAAATCCTGCAGCTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: EGRYIILCERWR*STQLLKSCSCP Trigger: AGGACAGCTGCAGGATTTCAAAAGCTGTGTGGAGCAACGCCATCTCTCACACAGAATGATGTATCTGCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR TCA 72 bp | CCCCTGAAGCTGGAGTTACAGCCAAGTAGAGCTGCCTaGTGTATGTGCTGGAAATCAATAGGTTCTCTGCAA | + |
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Preference number: 3 (lower is better) Translates to: PLKLELQPSRAA*CMCWKSIGSLQ Trigger: TTGCAGAGAACCTATTGATTTCCAGCACATACATCAGGCAGCTCTACTTGGCTGTAACTCCAGCTTCAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR-3UTR CAA 90 bp | CTAATGCATTTCTGGGCTGGCTCCCTCTGTATGCAAAAGAAAGTCCTAAAAGCCGGAGCTGTCCACTGGTaGAGTGGACATTTTCAAAAC | + |
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Preference number: 3 (lower is better) Translates to: LMHFWAGSLCMQKKVLKAGAVHW*SGHFQN Trigger: GTTTTGAAAATGTCCACTCAACCAGTGGACAGCTCC...GGCTTTTAGGACTTTCTTTTGCATACAGAGGGAGCCAGCCCAGAAATGCATTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR-3UTR CAA 90 bp | GCTGTTTCTGAGAAGCCTGCAGAAAACAAAGACTCAGGCAGTGGTGGCAGGACTGGCCTGCAACTCTGTTaGAATTTTCACCTTAAATGT | + |
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Preference number: 3 (lower is better) Translates to: AVSEKPAENKDSGSGGRTGLQLC*NFHLKC Trigger: ACATTTAAGGTGAAAATTCAAACAGAGTTGCAGGCC...AGTCCTGCCACCACTGCCTGAGTCTTTGTTTTCTGCAGGCTTCTCAGAAACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR CCA 72 bp | GAACGAAGCAATCCTACTCACTTAGTCAACCTACACTaGTCTAATCATGTGGCCTCTGGGATGACCTATCAT | + |
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Preference number: 3 (lower is better) Translates to: ERSNPTHLVNLH*SNHVASGMTYH Trigger: ATGATAGGTCATCCCAGAGGCCACATGATTAGACCAGTGTAGGTTGACTAAGTGAGTAGGATTGCTTCGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR-3UTR CAA 90 bp | AGCAGGCGCATTTTGCACTACACTGCTGCCATGTCACACAACAACAATAAACACGGCAATAAAAATGTCTaGTCTACAAGGAGCTGTCCA | + |
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Preference number: 3 (lower is better) Translates to: SRRILHYTAAMSHNNNKHGNKNV*STRSCP Trigger: TGGACAGCTCCTTGTAGACAAGACATTTTTATTGCC...GTGTTTATTGTTGTTGTGTGACATGGCAGCAGTGTAGTGCAAAATGCGCCTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR TCA 72 bp | GATGATGTGCCACCATGTCTGGCCTGCAACTCTGTTTaGATTTTCACCTTAAATGTTTGGTCCTCAAAGCTT | + |
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Preference number: 3 (lower is better) Translates to: DDVPPCLACNSV*IFTLNVWSSKL Trigger: AAGCTTTGAGGACCAAACATTTAAGGTGAAAATTCAAACAGAGTTGCAGGCCAGACATGGTGGCACATCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR CCA 72 bp | AATGTCTTGTCTACAAGGAGCTGTCCACTGGTTGAGTaGACATTTTCAAAACGGAGTAAGCCCATTGGTTTT | + |
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Preference number: 3 (lower is better) Translates to: NVLSTRSCPLVE*TFSKRSKPIGF Trigger: AAAACCAATGGGCTTACTCCGTTTTGAAAATGTCCACTCAACCAGTGGACAGCTCCTTGTAGACAAGACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR CCA 72 bp | TGTTATTCTGAAACACATTCTCATTGGGTAGCTGGCTaGCCTGGAATTAACTATGTAAGTGGGTTGGCTTGT | + |
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Preference number: 3 (lower is better) Translates to: CYSETHSHWVAG*PGINYVSGLAC Trigger: ACAAGCCAACCCACTTACATAGTTAATTCCAGGCCAGCCAGCTACCCAATGAGAATGTGTTTCAGAATAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR-3UTR CAA 90 bp | ATTTCTGAATATCTGTATGTGAGAAATTGTATGTCTATGCACAGGATGGCCACATGCTCCACACAGCTTTaGAAATCCTGCAGCTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: ISEYLYVRNCMSMHRMATCSTQL*KSCSCP Trigger: AGGACAGCTGCAGGATTTCAAAAGCTGTGTGGAGCA...TGTGGCCATCCTGTGCATAGACATACAATTTCTCACATACAGATATTCAGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR-3UTR CAA 90 bp | AATTGTTCACTTTGTTTTGTGTGTGTGTGTATGTGCACTCTCTCTCTCTCTCTCGATGCCCACAGAAGTTaGAGTGTCTTGTTTACTCAG | + |
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Preference number: 3 (lower is better) Translates to: NCSLCFVCVCMCTLSLSLDAHRS*SVLFTQ Trigger: CTGAGTAAACAAGACACTCAAACTTCTGTGGGCATC...GAGAGAGAGAGAGAGAGTGCACATACACACACACACAAAACAAAGTGAACAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR TCA 72 bp | TCTGGGATGACCTATCATTTGATGCCCACAGAAGTTTaGGTGTCTTGTTTACTCAGTAAAGCAAAGGCCATA | + |
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Preference number: 3 (lower is better) Translates to: SGMTYHLMPTEV*VSCLLSKAKAI Trigger: TATGGCCTTTGCTTTACTGAGTAAACAAGACACTCAAACTTCTGTGGGCATCAAATGATAGGTCATCCCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR CCA 72 bp | CCATTAACATACAGAGAATCTAATGCATTTCTGGGCTaGCTCCCTCTGTATGCAAAAGAAAGTCCTAAAAGC | + |
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Preference number: 3 (lower is better) Translates to: PLTYRESNAFLG*LPLYAKESPKS Trigger: GCTTTTAGGACTTTCTTTTGCATACAGAGGGAGCCAGCCCAGAAATGCATTAGATTCTCTGTATGTTAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR GCA 72 bp | AAAAATTGTTCACTTTGTTTTGTGTGTGTGTGTATGTaGACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: KNCSLCFVCVCM*TLSLSLSLSLS Trigger: AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGCACATACACACACACACAAAACAAAGTGAACAATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR-3UTR CAA 90 bp | ATACTAAGTTCACTCTATGTAAATGTAGCAGCTAGAAGAGAGTTTGTATATGCGTTTCACCTTAAATGTTaGGTCCTCAAAGCTTTAGTG | + |
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Preference number: 3 (lower is better) Translates to: ILSSLYVNVAARREFVYAFHLKC*VLKALV Trigger: CACTAAAGCTTTGAGGACCAAACATTTAAGGTGAAA...CGCATATACAAACTCTCTTCTAGCTGCTACATTTACATAGAGTGAACTTAGTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR CCA 72 bp | CTTATTTTTCTTTGTTATTCTGAAACACATTCTCATTaGGTAGCTGGCTGGCCTGGAATTAACTATGTAAGT | + |
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Preference number: 3 (lower is better) Translates to: LIFLCYSETHSH*VAGWPGINYVS Trigger: ACTTACATAGTTAATTCCAGGCCAGCCAGCTACCCAATGAGAATGTGTTTCAGAATAACAAAGAAAAATAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| 3UTR GCA 72 bp | ATAAATTTTAAGAAACCCTGCCTTATAGAGGTGCATTaGTTCAGATTAACAGCAATATCCAGAGGCAAATTA | + |
|
Preference number: 3 (lower is better) Translates to: INFKKPCLIEVH*FRLTAISRGKL Trigger: TAATTTGCCTCTGGATATTGCTGTTAATCTGAAGCAATGCACCTCTATAAGGCAGGGTTTCTTAAAATTTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR TCA 90 bp | ACACACACACACACACACACACACACACACACAAGCAGGTCCTCACGGAGGGCAGGAGTTTGTATGTGTTaGAGTAGCCCACCACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHTSRSSRRAGVCMC*SSPPPA Trigger: AGCAGGTGGTGGGCTACTTCAACACATACAAACTCC...TGCCCTCCGTGAGGACCTGCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR TCA 90 bp | GCTGTTTCTGAGAAGCCTGCAGAAAACAAAGACTCAGGCAGTGGTGGCAGGACTATAACCTCTGTTCGGTaGACCATCAGCCAGTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AVSEKPAENKDSGSGGRTITSVR*TISQWP Trigger: TGGCCACTGGCTGATGGTTCACCGAACAGAGGTTAT...AGTCCTGCCACCACTGCCTGAGTCTTTGTTTTCTGCAGGCTTCTCAGAAACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR GCA 90 bp | GCTGTTTCTGAGAAGCCTGCAGAAAACAAAGACTCAGGCAGTGGTGGCAGGACTTTGTGTGGCTGCAGCTaGAAACCTGGCCACGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: AVSEKPAENKDSGSGGRTLCGCS*KPGHVI Trigger: AATCACGTGGCCAGGTTTGCAGCTGCAGCCACACAA...AGTCCTGCCACCACTGCCTGAGTCTTTGTTTTCTGCAGGCTTCTCAGAAACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR CCA 90 bp | AGCAGGCGCATTTTGCACTACACTGCTGCCATGTCACACAACAACAATAAACACGGGAGTCTGGAGAACTaGGGTCACCATTGGAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SRRILHYTAAMSHNNNKHGSLEN*GHHWSR Trigger: CCGGCTCCAATGGTGACCCCAGTTCTCCAGACTCCC...GTGTTTATTGTTGTTGTGTGACATGGCAGCAGTGTAGTGCAAAATGCGCCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR TCA 90 bp | GGAAGGAGACTATCAGATCCCCTGAAGCTGGAGTTACAGCCAAGTAGAGCTGCCCAGGTTTGCCATTTTTaGGCACCAGTGGTCGAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: GRRLSDPLKLELQPSRAAQVCHF*APVVEL Trigger: TAACTCGACCACTGGTGCTCAAAAATGGCAAACCTG...GGCAGCTCTACTTGGCTGTAACTCCAGCTTCAGGGGATCTGATAGTCTCCTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR CCA 90 bp | ACACACACACACACACACACACACACACACACAAGCAGGTCCTCACGGAGGGCAAGCAAGCGCTTCTTTTaGAGCATTCTGGAACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHTSRSSRRASKRFF*SILELS Trigger: AGACAGTTCCAGAATGCTCCAAAAGAAGCGCTTGCT...TGCCCTCCGTGAGGACCTGCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR TCA 90 bp | ACACACACACACACACACACACACACACACACAAGCAGGTCCTCACGGAGGGCACAATTTGTCCAAGAGTaGCTTCACATTCTCCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHTSRSSRRAQFVQE*LHILPR Trigger: TCTTGGGAGAATGTGAAGTCACTCTTGGACAAATTG...TGCCCTCCGTGAGGACCTGCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR TCA 90 bp | TGTGCCACCATGTCTGGCCTGCAACTCTGTTTGAATTTTCACCTTAAATGTTTGTATGGCCACCTCTCCTaGAGGGGCACGGAGACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CATMSGLQLCLNFHLKCLYGHLS*RGTETS Trigger: GGAAGTCTCCGTGCCCCTTCAGGAGAGGTGGCCATA...CAAACATTTAAGGTGAAAATTCAAACAGAGTTGCAGGCCAGACATGGTGGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR TCA 90 bp | ACACACACACACACACACACACACACACACACAAGCAGGTCCTCACGGAGGGCACTGAAAGGCACAAACTaGACAATATCTCTTATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHTSRSSRRALKGTN*TISLMA Trigger: GGCCATAAGAGATATTGTTCAGTTTGTGCCTTTCAG...TGCCCTCCGTGAGGACCTGCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR CCA 90 bp | AGAAGCGCAGAGGGCAGATACATCATTCTGTGTGAGAGATGGCGTTGCTCCACAGAACAATATCTCTTATaGCCACCTCTCCTGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RSAEGRYIILCERWRCSTEQYLL*PPLLKG Trigger: CCCCTTCAGGAGAGGTGGCCATAAGAGATATTGTTC...TGTGGAGCAACGCCATCTCTCACACAGAATGATGTATCTGCCCTCTGCGCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR GCA 90 bp | GGAAGGAGACTATCAGATCCCCTGAAGCTGGAGTTACAGCCAAGTAGAGCTGCCAATACTCCCTTTCCCTaGAGGTTTGCCATTTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRRLSDPLKLELQPSRAANTPFP*RFAIFE Trigger: CTCAAAAATGGCAAACCTGCAGGGAAAGGGAGTATT...GGCAGCTCTACTTGGCTGTAACTCCAGCTTCAGGGGATCTGATAGTCTCCTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR GCA 90 bp | AAAACAAAGACTCAGGCAGTGGTGGCAGGACTCAGTAACACGGACAGGAATGCTGGCTGCATTGACGATTaGCTGTCTGGTTTCATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KTKTQAVVAGLSNTDRNAGCIDD*LSGFIK Trigger: CTTGATGAAACCAGACAGGCAATCGTCAATGCAGCC...AGCATTCCTGTCCGTGTTACTGAGTCCTGCCACCACTGCCTGAGTCTTTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR CCA 90 bp | AGAAGCGCAGAGGGCAGATACATCATTCTGTGTGAGAGATGGCGTTGCTCCACATCACAGCTGGGTTTTTaGGAGGAAGGAGTTTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: RSAEGRYIILCERWRCSTSQLGF*EEGVCM Trigger: CATACAAACTCCTTCCTCCCAAAAACCCAGCTGTGA...TGTGGAGCAACGCCATCTCTCACACAGAATGATGTATCTGCCCTCTGCGCTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| 3UTR CAA 72 bp | ACTGCAGCCTTGGTTGTCATAGACAGCAGGCGCATTTaGCACTACACTGCTGCCATGTCACACAACAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: TAALVVIDSRRI*HYTAAMSHNNN Trigger: ATTGTTGTTGTGTGACATGGCAGCAGTGTAGTGCAAAATGCGCCTGCTGTCTATGACAACCAAGGCTGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| 3UTR CAA 72 bp | GCTTGCCATGTTGTATCACTCAACTTCACTGCAGCCTaGGTTGTCATAGACAGCAGGCGCATTTTGCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: ACHVVSLNFTAA*VVIDSRRILHY Trigger: GTAGTGCAAAATGCGCCTGCTGTCTATGACAACCAAGGCTGCAGTGAAGTTGAGTGATACAACATGGCAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR TCA 90 bp | GCTGTTTCTGAGAAGCCTGCAGAAAACAAAGACTCAGGCAGTGGTGGCAGGACTTTCATATTCAACAGGTaGGCTTCTGGAGGCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AVSEKPAENKDSGSGGRTFIFNR*ASGGFF Trigger: AAAGAAGCCTCCAGAAGCTCACCTGTTGAATATGAA...AGTCCTGCCACCACTGCCTGAGTCTTTGTTTTCTGCAGGCTTCTCAGAAACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR TCA 90 bp | AAAACAAAGACTCAGGCAGTGGTGGCAGGACTCAGTAACACGGACAGGAATGCTAAGAGCACAAAGTATTaGGAAGCTGTCTGCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KTKTQAVVAGLSNTDRNAKSTKY*EAVCCC Trigger: ACAACAGCAGACAGCTTCTCAATACTTTGTGCTCTT...AGCATTCCTGTCCGTGTTACTGAGTCCTGCCACCACTGCCTGAGTCTTTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR TCA 90 bp | AGCAGGCGCATTTTGCACTACACTGCTGCCATGTCACACAACAACAATAAACACACCTCATACCACTGGTaGCCACTCGTATTCAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SRRILHYTAAMSHNNNKHTSYHW*PLVFKN Trigger: GTTTTTGAATACGAGTGGTCACCAGTGGTATGAGGT...GTGTTTATTGTTGTTGTGTGACATGGCAGCAGTGTAGTGCAAAATGCGCCTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR TCA 90 bp | AAAACAAAGACTCAGGCAGTGGTGGCAGGACTCAGTAACACGGACAGGAATGCTGCAAACCTGGCCACGTaGTTTATAATTGGAGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KTKTQAVVAGLSNTDRNAANLAT*FIIGEK Trigger: TTTTTCTCCAATTATAAATCACGTGGCCAGGTTTGC...AGCATTCCTGTCCGTGTTACTGAGTCCTGCCACCACTGCCTGAGTCTTTGTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR TCA 90 bp | AGTAAGCCCATTGGTTTTCATAAGCAACCATATGAAAACACAGCTAGTACACTGGAAACTCCATGGCACTaGAGTCAGCTCCCCCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: SKPIGFHKQPYENTASTLETPWH*SQLPQL Trigger: GAGTTGGGGGAGCTGACTTCAGTGCCATGGAGTTTC...CAGTGTACTAGCTGTGTTTTCATATGGTTGCTTATGAAAACCAATGGGCTTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR TCA 90 bp | TGTGCCACCATGTCTGGCCTGCAACTCTGTTTGAATTTTCACCTTAAATGTTTGTCTGCCAAGACACACTaGGCAAGCGCTTCTTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CATMSGLQLCLNFHLKCLSAKTH*ASASFG Trigger: TCCAAAAGAAGCGCTTGCTCAGTGTGTCTTGGCAGA...CAAACATTTAAGGTGAAAATTCAAACAGAGTTGCAGGCCAGACATGGTGGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR CCA 90 bp | AGTAAGCCCATTGGTTTTCATAAGCAACCATATGAAAACACAGCTAGTACACTGCTGTCTGCTGTTGTGTaGCTGCAGCTGCAAACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SKPIGFHKQPYENTASTLLSAVV*LQLQTW Trigger: CCAGGTTTGCAGCTGCAGCCACACAACAGCAGACAG...CAGTGTACTAGCTGTGTTTTCATATGGTTGCTTATGAAAACCAATGGGCTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR TCA 90 bp | AGTAAGCCCATTGGTTTTCATAAGCAACCATATGAAAACACAGCTAGTACACTGGCTGGCACCCTCCCATaGTGTAGTCAAGAAATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SKPIGFHKQPYENTASTLAGTLP*CSQEMC Trigger: GCACATTTCTTGACTACATCATGGGAGGGTGCCAGC...CAGTGTACTAGCTGTGTTTTCATATGGTTGCTTATGAAAACCAATGGGCTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR GCA 90 bp | AGTAAGCCCATTGGTTTTCATAAGCAACCATATGAAAACACAGCTAGTACACTGCTGCTGGGGAATCTCTaGCAAGACACACTGAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SKPIGFHKQPYENTASTLLLGNL*QDTLSK Trigger: CTTGCTCAGTGTGTCTTGGCAGAGATTCCCCAGCAG...CAGTGTACTAGCTGTGTTTTCATATGGTTGCTTATGAAAACCAATGGGCTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR CCA 90 bp | CTAATGCATTTCTGGGCTGGCTCCCTCTGTATGCAAAAGAAAGTCCTAAAAGCCTCTTTTGGAGCATTCTaGAACTGTCTGAAAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LMHFWAGSLCMQKKVLKASFGAF*NCLKGT Trigger: TGTGCCTTTCAGACAGTTCCAGAATGCTCCAAAAGA...GGCTTTTAGGACTTTCTTTTGCATACAGAGGGAGCCAGCCCAGAAATGCATTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| 3UTR CAA 72 bp | AAATGTGTAATGAATCTGAGGTGTTTCTGGCAGGGCTaGCCATGTTGTATCACTCAACTTCACTGCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KCVMNLRCFWQG*PCCITQLHCSL Trigger: AAGGCTGCAGTGAAGTTGAGTGATACAACATGGCAAGCCCTGCCAGAAACACCTCAGATTCATTACACATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR TCA 90 bp | ATTTCTGAATATCTGTATGTGAGAAATTGTATGTCTATGCACAGGATGGCCACACAGCCAGTGGCCATCTaGTGTCTGCTTGTGAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: ISEYLYVRNCMSMHRMATQPVAI*CLLVKL Trigger: GAGTTTCACAAGCAGACATCAGATGGCCACTGGCTG...TGTGGCCATCCTGTGCATAGACATACAATTTCTCACATACAGATATTCAGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR GCA 90 bp | AGCAGGCGCATTTTGCACTACACTGCTGCCATGTCACACAACAACAATAAACACGATAAGCCTCTACAATaGCTTGGATTCCATTGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SRRILHYTAAMSHNNNKHDKPLQ*LGFHCN Trigger: ATTGCAATGGAATCCAAGGCATTGTAGAGGCTTATC...GTGTTTATTGTTGTTGTGTGACATGGCAGCAGTGTAGTGCAAAATGCGCCTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR CCA 90 bp | AGCAGGCGCATTTTGCACTACACTGCTGCCATGTCACACAACAACAATAAACACGAGTTAGCTTCTTACTaGAAACAATTTGTCCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SRRILHYTAAMSHNNNKHELASY*KQFVQE Trigger: CTCTTGGACAAATTGTTTCCAGTAAGAAGCTAACTC...GTGTTTATTGTTGTTGTGTGACATGGCAGCAGTGTAGTGCAAAATGCGCCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR CCA 90 bp | ATTTCTGAATATCTGTATGTGAGAAATTGTATGTCTATGCACAGGATGGCCACAGTAATGCAGGGAGTCTaGAGAACTGGGGTCACCATT | + |
|
Preference number: 4 (lower is better) Translates to: ISEYLYVRNCMSMHRMATVMQGV*RTGVTI Trigger: AATGGTGACCCCAGTTCTCCAGACTCCCTGCATTAC...TGTGGCCATCCTGTGCATAGACATACAATTTCTCACATACAGATATTCAGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR TCA 90 bp | AATTGTTCACTTTGTTTTGTGTGTGTGTGTATGTGCACTCTCTCTCTCTCTCTCTTCTGGAGGCTTCTTTaGGTTTTGTCATGGTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NCSLCFVCVCMCTLSLSLFWRLL*VLSWWF Trigger: AAACCACCATGACAAAACTCAAAGAAGCCTCCAGAA...GAGAGAGAGAGAGAGAGTGCACATACACACACACACAAAACAAAGTGAACAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| 3UTR CAA 72 bp | GGCCTGCAACTCTGTTTGAATTTTCACCTTAAATGTTaGGTCCTCAAAGCTTTAGTGAACGAAGCAATCCTA | + |
|
Preference number: 4 (lower is better) Translates to: GLQLCLNFHLKC*VLKALVNEAIL Trigger: TAGGATTGCTTCGTTCACTAAAGCTTTGAGGACCAAACATTTAAGGTGAAAATTCAAACAGAGTTGCAGGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR TCA 90 bp | ATACTAAGTTCACTCTATGTAAATGTAGCAGCTAGAAGAGAGTTTGTATATGCGTCTGATGTCTGCTTGTaGAACTCCAAGTATGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: ILSSLYVNVAARREFVYASDVCL*NSKYGS Trigger: AGATCCATACTTGGAGTTTCACAAGCAGACATCAGA...CGCATATACAAACTCTCTTCTAGCTGCTACATTTACATAGAGTGAACTTAGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR CCA 90 bp | AGTAAGCCCATTGGTTTTCATAAGCAACCATATGAAAACACAGCTAGTACACTGTCCAAAGCCAAAAGCTaGAAACATTTTATCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SKPIGFHKQPYENTASTLSKAKS*KHFISI Trigger: GATGCTGATAAAATGTTTCCAGCTTTTGGCTTTGGA...CAGTGTACTAGCTGTGTTTTCATATGGTTGCTTATGAAAACCAATGGGCTTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR CCA 90 bp | AGTAAGCCCATTGGTTTTCATAAGCAACCATATGAAAACACAGCTAGTACACTGTGGAGAAAAATTAGTTaGTCCATAGAGTCTTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SKPIGFHKQPYENTASTLWRKIS*SIESYL Trigger: CAGATAAGACTCTATGGACCAACTAATTTTTCTCCA...CAGTGTACTAGCTGTGTTTTCATATGGTTGCTTATGAAAACCAATGGGCTTACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS GCA 90 bp | GAGTTTGTATGTGTTGAAGTAGCCCACCACCTGCTGGGGAATCTCTaGCAAGACACACTGAGCAAGCGCTTCTTTTGGAGCATTCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: EFVCVEVAHHLLGNL*QDTLSKRFFWSILE Trigger: TTCCAGAATGCTCCAAAAGAAGCGCTTGCTCAGTGTGTCTTGGCAGAGATTCCCCAGCAGGTGGTGGGCTACTTCAACACATACAAACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS TCA 90 bp | AGCGCTTCTTTTGGAGCATTCTGGAACTGTCTGAAAGGCACAAACTaGACAATATCTCTTATGGCCACCTCTCCTGAAGGGGCACGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SASFGAFWNCLKGTN*TISLMATSPEGARR Trigger: TCTCCGTGCCCCTTCAGGAGAGGTGGCCATAAGAGATATTGTTCAGTTTGTGCCTTTCAGACAGTTCCAGAATGCTCCAAAAGAAGCGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR CAA 90 bp | CTAATGCATTTCTGGGCTGGCTCCCTCTGTATGCAAAAGAAAGTCCTAAAAGCCGAGCAAGCGCTTCTTTaGGAGCATTCTGGAACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LMHFWAGSLCMQKKVLKAEQALL*EHSGTV Trigger: GACAGTTCCAGAATGCTCCAAAAGAAGCGCTTGCTC...GGCTTTTAGGACTTTCTTTTGCATACAGAGGGAGCCAGCCCAGAAATGCATTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR CAA 90 bp | CTAATGCATTTCTGGGCTGGCTCCCTCTGTATGCAAAAGAAAGTCCTAAAAGCCAGCCTCTACAATGCCTaGGATTCCATTGCAATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LMHFWAGSLCMQKKVLKASLYNA*DSIAIG Trigger: CCCTATTGCAATGGAATCCAAGGCATTGTAGAGGCT...GGCTTTTAGGACTTTCTTTTGCATACAGAGGGAGCCAGCCCAGAAATGCATTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR CAA 90 bp | TGTGCCACCATGTCTGGCCTGCAACTCTGTTTGAATTTTCACCTTAAATGTTTGAGAAGCTGTCTGCTGTaGTGTGGCTGCAGCTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: CATMSGLQLCLNFHLKCLRSCLL*CGCSCK Trigger: TTTGCAGCTGCAGCCACACAACAGCAGACAGCTTCT...CAAACATTTAAGGTGAAAATTCAAACAGAGTTGCAGGCCAGACATGGTGGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR CAA 90 bp | CTAATGCATTTCTGGGCTGGCTCCCTCTGTATGCAAAAGAAAGTCCTAAAAGCCCTTCTGGAGGCTTCTTaGAGTTTTGTCATGGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LMHFWAGSLCMQKKVLKALLEAS*SFVMVV Trigger: AACCACCATGACAAAACTCAAAGAAGCCTCCAGAAG...GGCTTTTAGGACTTTCTTTTGCATACAGAGGGAGCCAGCCCAGAAATGCATTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR CAA 90 bp | CTAATGCATTTCTGGGCTGGCTCCCTCTGTATGCAAAAGAAAGTCCTAAAAGCCTTTTGTCATGGTGGTTaGAAATGTTCCAATGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: LMHFWAGSLCMQKKVLKAFCHGG*KCSNEI Trigger: GATCTCATTGGAACATTTCAAACCACCATGACAAAA...GGCTTTTAGGACTTTCTTTTGCATACAGAGGGAGCCAGCCCAGAAATGCATTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR CAA 90 bp | ATACTAAGTTCACTCTATGTAAATGTAGCAGCTAGAAGAGAGTTTGTATATGCGGCAGGTTTGCCATTTTaGAGCACCAGTGGTCGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ILSSLYVNVAARREFVYAAGLPF*STSGRV Trigger: AACTCGACCACTGGTGCTCAAAAATGGCAAACCTGC...CGCATATACAAACTCTCTTCTAGCTGCTACATTTACATAGAGTGAACTTAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS-3UTR CAA 90 bp | AGTAAGCCCATTGGTTTTCATAAGCAACCATATGAAAACACAGCTAGTACACTGTTCACAGCTGGGTTTTaGGGAGGAAGGAGTTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: SKPIGFHKQPYENTASTLFTAGF*GGRSLY Trigger: ATACAAACTCCTTCCTCCCAAAAACCCAGCTGTGAA...CAGTGTACTAGCTGTGTTTTCATATGGTTGCTTATGAAAACCAATGGGCTTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS GCA 72 bp | TGTGTTGAAGTAGCCCACCACCTGCTGGGGAATCTCTaGCAAGACACACTGAGCAAGCGCTTCTTTTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: CVEVAHHLLGNL*QDTLSKRFFWS Trigger: GCTCCAAAAGAAGCGCTTGCTCAGTGTGTCTTGGCAGAGATTCCCCAGCAGGTGGTGGGCTACTTCAACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
||
| CDS GCA 72 bp | GATGATAGACATGGGCAGCTTGGCTGCATTGACGATTaGCTGTCTGGTTTCATCAAGGTCTGTGATCACGCC | + |
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Preference number: 6 (lower is better) Translates to: DDRHGQLGCIDD*LSGFIKVCDHA Trigger: GGCGTGATCACAGACCTTGATGAAACCAGACAGGCAATCGTCAATGCAGCCAAGCTGCCCATGTCTATCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| CDS GCA 72 bp | TTATCTGGGGAAGACAGGTCCGATAAGCCTCTACAATaGCTTGGATTCCATTGCAATAGGGGTTCGATGGGT | + |
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Preference number: 6 (lower is better) Translates to: LSGEDRSDKPLQ*LGFHCNRGSMG Trigger: ACCCATCGAACCCCTATTGCAATGGAATCCAAGGCATTGTAGAGGCTTATCGGACCTGTCTTCCCCAGATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| CDS CAA 72 bp | CTGGGGAAGACAGGTCCGATAAGCCTCTACAATGCCTaGGATTCCATTGCAATAGGGGTTCGATGGGTTAAA | + |
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Preference number: 6 (lower is better) Translates to: LGKTGPISLYNA*DSIAIGVRWVK Trigger: TTTAACCCATCGAACCCCTATTGCAATGGAATCCAAGGCATTGTAGAGGCTTATCGGACCTGTCTTCCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| CDS CAA 90 bp | GAGTCTTATCTGGGGAAGACAGGTCCGATAAGCCTCTACAATGCCTaGGATTCCATTGCAATAGGGGTTCGATGGGTTAAAGTTCATCGG | + |
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Preference number: 6 (lower is better) Translates to: ESYLGKTGPISLYNA*DSIAIGVRWVKVHR Trigger: CCGATGAACTTTAACCCATCGAACCCCTATTGCAATGGAATCCAAGGCATTGTAGAGGCTTATCGGACCTGTCTTCCCCAGATAAGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| CDS TCA 72 bp | TTTGGAGCATTCTGGAACTGTCTGAAAGGCACAAACTaGACAATATCTCTTATGGCCACCTCTCCTGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: FGAFWNCLKGTN*TISLMATSPEG Trigger: CCCTTCAGGAGAGGTGGCCATAAGAGATATTGTTCAGTTTGTGCCTTTCAGACAGTTCCAGAATGCTCCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| CDS GCA 72 bp | GTATTGAGAAGCTGTCTGCTGTTGTGTGGCTGCAGCTaGAAACCTGGCCACGTGATTTATAATTGGAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: VLRSCLLLCGCS*KPGHVIYNWRK Trigger: TTTTCTCCAATTATAAATCACGTGGCCAGGTTTGCAGCTGCAGCCACACAACAGCAGACAGCTTCTCAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| CDS CAA 90 bp | ACACATAAAGGGTCCGACTTTGATGTTACATCTGCATCCAAAAGGTaGTTACAGGAAACATTTAGTTCCACCTTCGTGACACACTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: THKGSDFDVTSASKR*LQETFSSTFVTHWA Trigger: TGCCCAGTGTGTCACGAAGGTGGAACTAAATGTTTCCTGTAACAACCTTTTGGATGCAGATGTAACATCAAAGTCGGACCCTTTATGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| CDS CAA 90 bp | TCTGCTGAAATCGTAATACTCCCTTTCCCTGCAGGTTTGCCATTTTaGAGCACCAGTGGTCGAGTTAGCTTCTTACTGGAAACAATTTGT | + |
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Preference number: 6 (lower is better) Translates to: SAEIVILPFPAGLPF*STSGRVSFLLETIC Trigger: ACAAATTGTTTCCAGTAAGAAGCTAACTCGACCACTGGTGCTCAAAAATGGCAAACCTGCAGGGAAAGGGAGTATTACGATTTCAGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| CDS TCA 72 bp | TTAATCCTTTCTGTCCGTTCAACCTCATACCACTGGTaGCCACTCGTATTCAAAAACAGCACACATAAAGGG | + |
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Preference number: 6 (lower is better) Translates to: LILSVRSTSYHW*PLVFKNSTHKG Trigger: CCCTTTATGTGTGCTGTTTTTGAATACGAGTGGTCACCAGTGGTATGAGGTTGAACGGACAGAAAGGATTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| CDS CAA 90 bp | TTTATTTCTTCTGCTGAAATCGTAATACTCCCTTTCCCTGCAGGTTaGCCATTTTTGAGCACCAGTGGTCGAGTTAGCTTCTTACTGGAA | + |
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Preference number: 6 (lower is better) Translates to: FISSAEIVILPFPAG*PFLSTSGRVSFLLE Trigger: TTCCAGTAAGAAGCTAACTCGACCACTGGTGCTCAAAAATGGCAAACCTGCAGGGAAAGGGAGTATTACGATTTCAGCAGAAGAAATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| CDS CCA 72 bp | TACAATGCCTTGGATTCCATTGCAATAGGGGTTCGATaGGTTAAAGTTCATCGGAAATTCATGAGATACCTG | + |
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Preference number: 6 (lower is better) Translates to: YNALDSIAIGVR*VKVHRKFMRYL Trigger: CAGGTATCTCATGAATTTCCGATGAACTTTAACCCATCGAACCCCTATTGCAATGGAATCCAAGGCATTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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| CDS CAA 72 bp | GCTTCTGGAGGCTTCTTTGAGTTTTGTCATGGTGGTTaGAAATGTTCCAATGAGATCATGCGATCCATCATT | + |
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Preference number: 6 (lower is better) Translates to: ASGGFFEFCHGG*KCSNEIMRSII Trigger: AATGATGGATCGCATGATCTCATTGGAACATTTCAAACCACCATGACAAAACTCAAAGAAGCCTCCAGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029885.5 |
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