Pregenerated sensors for CPNE2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034361Ensembl transcript IDs: ENSMUST00000048653.10, ENSMUST00000109537.2, ENSMUST00000212550.2
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAACACAGTCACAAGTATAAAAACAGCAGACCACCATACAAAGTATaGAGTAAGGGATATACATTCCTTCTTGCAGCTAGTTACTTAGAA | + |
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Preference number: 1 (lower is better) Translates to: EHSHKYKNSRPPYKV*SKGYTFLLAASYLE Trigger: TTCTAAGTAACTAGCTGCAAGAAGGAATGTATATCCCTTACTGCATACTTTGTATGGTGGTCTGCTGTTTTTATACTTGTGACTGTGTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
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| 3UTR-3UTR CCA 90 bp | GCAGACAGGCTGAGTACGCCTGGGCGATGCCATCCACGCCTGAGCAGAAAGGGTCAGTCTGGTGGTAACTaGGCCCCAAATCCCAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: ADRLSTPGRCHPRLSRKGQSGGN*APNPRA Trigger: TGCTCTGGGATTTGGGGCCCAGTTACCACCAGACTG...ACCCTTTCTGCTCAGGCGTGGATGGCATCGCCCAGGCGTACTCAGCCTGTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212550.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGGAACGTGCATGTTCCTaGGGAGGCCGGGGGCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: EADLSWKHHPLTLTKGAQERACS*GGRGLS Trigger: GCTGAGCCCCCGGCCTCCCCAGGAACATGCACGTTC...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGCACGAGGAAGCGGGGTaGACGTGCATGTTCCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: EADLSWKHHPLTLTKGAQHEEAG*TCMFLG Trigger: CCCCAGGAACATGCACGTTCACCCCGCTTCCTCGTG...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCACACGAGGAAGCGGGGTaGACGTGCATGTTCCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: GSRFVLEASSIDSDKGSPHEEAG*TCMFLG Trigger: CCCCAGGAACATGCACGTTCACCCCGCTTCCTCGTG...TGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| 3UTR CAA 90 bp | CATTCAATACTTAGAGTGGCAGGAGGGTGGGGAGAGGAAGCCGATTaGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: HSILRVAGGWGEEAD*SWKHHPLTLTKGAQ Trigger: CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTCCTCTCCCCACCCTCCTGCCACTCTAAGTATTGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCACAAGTATAAAAACAGCAGACCACCATACAAAGTATGCAGTAAGGGATATGAACGTGCATGTTCCTaGGGAGGCCGGGGGCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: SHKYKNSRPPYKVCSKGYERACS*GGRGLS Trigger: GCTGAGCCCCCGGCCTCCCCAGGAACATGCACGTTC...ATATCCCTTACTGCATACTTTGTATGGTGGTCTGCTGTTTTTATACTTGTGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
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| 3UTR-3UTR CCA 90 bp | AAGTATAAAAACAGCAGACCACCATACAAAGTATGCAGTAAGGGATATACATTCCAAAGGGAGCCCAGCTaGGCTGGGGAAGTTGTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: KYKNSRPPYKVCSKGYTFQREPS*AGEVVG Trigger: ACCCACAACTTCCCCAGCCCAGCTGGGCTCCCTTTG...GAATGTATATCCCTTACTGCATACTTTGTATGGTGGTCTGCTGTTTTTATACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
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| 3UTR-3UTR CCA 90 bp | AAGTATAAAAACAGCAGACCACCATACAAAGTATGCAGTAAGGGATATACATTCAGAGTGGCAGGAGGGTaGGGAGAGGAAGCCGATTTG | + |
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Preference number: 2 (lower is better) Translates to: KYKNSRPPYKVCSKGYTFRVAGG*GEEADL Trigger: CAAATCGGCTTCCTCTCCCCACCCTCCTGCCACTCT...GAATGTATATCCCTTACTGCATACTTTGTATGGTGGTCTGCTGTTTTTATACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
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| 3UTR-3UTR CCA 90 bp | AAGTATAAAAACAGCAGACCACCATACAAAGTATGCAGTAAGGGATATACATTCATTCAATACTTAGAGTaGCAGGAGGGTGGGGAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: KYKNSRPPYKVCSKGYTFIQYLE*QEGGER Trigger: CCTCTCCCCACCCTCCTGCCACTCTAAGTATTGAAT...GAATGTATATCCCTTACTGCATACTTTGTATGGTGGTCTGCTGTTTTTATACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
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| 3UTR CCA 72 bp | CCACCCACGAGGAAGCGGGGTGAACGTGCATGTTCCTaGGGAGGCCGGGGGCTCAGCTGGCATGCTGCGGCT | + |
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Preference number: 3 (lower is better) Translates to: PPTRKRGERACS*GGRGLSWHAAA Trigger: AGCCGCAGCATGCCAGCTGAGCCCCCGGCCTCCCCAGGAACATGCACGTTCACCCCGCTTCCTCGTGGGTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| 3UTR CCA 72 bp | GTGGCAGGAGGGTGGGGAGAGGAAGCCGATTTGTCCTaGAAGCATCATCCATTGACTCTGACAAAGGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: VAGGWGEEADLS*KHHPLTLTKGA Trigger: GGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTCCTCTCCCCACCCTCCTGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| 3UTR GCA 72 bp | CACAAGTATAAAAACAGCAGACCACCATACAAAGTATaGAGTAAGGGATATACATTCCTTCTTGCAGCTAGT | + |
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Preference number: 3 (lower is better) Translates to: HKYKNSRPPYKV*SKGYTFLLAAS Trigger: ACTAGCTGCAAGAAGGAATGTATATCCCTTACTGCATACTTTGTATGGTGGTCTGCTGTTTTTATACTTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
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| CDS-3UTR TCA 90 bp | GCAGACAGGCTGAGTACGCCTGGGCGATGCCATCCACGCCTGAGCAGAAAGGGTTCTGGAACTCGCCGATaGAGTCATGGCCTCCATTAC | + |
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Preference number: 4 (lower is better) Translates to: ADRLSTPGRCHPRLSRKGSGTRR*SHGLHY Trigger: GTAATGGAGGCCATGACTTCATCGGCGAGTTCCAGA...ACCCTTTCTGCTCAGGCGTGGATGGCATCGCCCAGGCGTACTCAGCCTGTCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212550.2 |
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| CDS-3UTR TCA 90 bp | GGAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGTGGGGCAGACAGGCTaGGTACGCCTGGGCGATGCC | + |
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Preference number: 4 (lower is better) Translates to: GSRFVLEASSIDSDKGSPVGQTG*VRLGDA Trigger: GGCATCGCCCAGGCGTACTCAGCCTGTCTGCCCCAC...TGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS-3UTR GCA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGGGCAGCTTGGAGGCCTaGACCACGGCGTGCCGAGTC | + |
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Preference number: 4 (lower is better) Translates to: EADLSWKHHPLTLTKGAQGSLEA*TTACRV Trigger: GACTCGGCACGCCGTGGTGCAGGCCTCCAAGCTGCC...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS-3UTR CCA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGTGCTGCTGGGTGGCCTaGGCTGCAAACCGGGCCACA | + |
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Preference number: 4 (lower is better) Translates to: EADLSWKHHPLTLTKGAQCCWVA*AANRAT Trigger: TGTGGCCCGGTTTGCAGCCCAGGCCACCCAGCAGCA...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS-3UTR CCA 90 bp | GGAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCACTGTCTGCTGCTGGGTaGCCTGGGCTGCAAACCGGG | + |
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Preference number: 4 (lower is better) Translates to: GSRFVLEASSIDSDKGSPLSAAG*PGLQTG Trigger: CCCGGTTTGCAGCCCAGGCCACCCAGCAGCAGACAG...TGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS-3UTR TCA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGCTCCTCGCCTGTGTGTaGGCGCAGTCGACGGTTGTC | + |
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Preference number: 4 (lower is better) Translates to: EADLSWKHHPLTLTKGAQLLACV*AQSTVV Trigger: GACAACCGTCGACTGCGCTCACACACAGGCGAGGAG...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS-3UTR TCA 90 bp | GGAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCACTCCTCGCCTGTGTGTaGGCGCAGTCGACGGTTGTC | + |
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Preference number: 4 (lower is better) Translates to: GSRFVLEASSIDSDKGSPLLACV*AQSTVV Trigger: GACAACCGTCGACTGCGCTCACACACAGGCGAGGAG...TGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS-3UTR GCA 90 bp | GGAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGCCTGCACCACGGCGTaGCGAGTCTCCTCCATGTCA | + |
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Preference number: 4 (lower is better) Translates to: GSRFVLEASSIDSDKGSPACTTA*RVSSMS Trigger: TGACATGGAGGAGACTCGGCACGCCGTGGTGCAGGC...TGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS-3UTR CCA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGCAGGCTGAGTACGCCTaGGCGATGCCATCCACGCCT | + |
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Preference number: 4 (lower is better) Translates to: EADLSWKHHPLTLTKGAQQAEYA*AMPSTP Trigger: AGGCGTGGATGGCATCGCCCAGGCGTACTCAGCCTG...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS-3UTR TCA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGGGTCAGACTTGGAGGTaGCATCCCGGTCCAGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: EADLSWKHHPLTLTKGAQGQTWR*HPGPAG Trigger: ACCTGCTGGACCGGGATGTCACCTCCAAGTCTGACC...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS-3UTR GCA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGCAATCGTGCCCAGGCTaGAGGAGAACTGGCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: EADLSWKHHPLTLTKGAQQSCPG*RRTGPG Trigger: TCCTGGGCCAGTTCTCCTGCAGCCTGGGCACGATTG...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS-3UTR GCA 90 bp | GGAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCACAATCGTGCCCAGGCTaGAGGAGAACTGGCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GSRFVLEASSIDSDKGSPQSCPG*RRTGPG Trigger: TCCTGGGCCAGTTCTCCTGCAGCCTGGGCACGATTG...TGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS-3UTR GCA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGAGTACGCCTGGGCGATaGCATCCACGCCTGAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: EADLSWKHHPLTLTKGAQSTPGR*HPRLSR Trigger: TCTGCTCAGGCGTGGATGGCATCGCCCAGGCGTACT...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS-3UTR CCA 90 bp | GGAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCACGGTCCAGCAGGTTCTaGCCACTCACTGACAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GSRFVLEASSIDSDKGSPRSSRF*PLTDSS Trigger: GGAGCTGTCAGTGAGTGGCCAGAACCTGCTGGACCG...TGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS-3UTR CCA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGCGGTCCAGCAGGTTCTaGCCACTCACTGACAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: EADLSWKHHPLTLTKGAQRSSRF*PLTDSS Trigger: GGAGCTGTCAGTGAGTGGCCAGAACCTGCTGGACCG...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS-3UTR CCA 90 bp | GGAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGTTGCTGTCTGCTGCTaGGTGGCCTGGGCTGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: GSRFVLEASSIDSDKGSPVAVCC*VAWAAN Trigger: GTTTGCAGCCCAGGCCACCCAGCAGCAGACAGCAAC...TGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS-3UTR TCA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGTTGCACACACAGCACTaGGAACCCAAGGGGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: EADLSWKHHPLTLTKGAQLHTQH*EPKGMA Trigger: GGCCATCCCCTTGGGTTCTCAGTGCTGTGTGTGCAA...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS-3UTR TCA 90 bp | GGAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCATACTGCACTACTTGCTaGGGCAGCTCCGCCAACACC | + |
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Preference number: 4 (lower is better) Translates to: GSRFVLEASSIDSDKGSPYCTTC*GSSANT Trigger: GGTGTTGGCGGAGCTGCCTCAGCAAGTAGTGCAGTA...TGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS-3UTR TCA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGTACTGCACTACTTGCTaGGGCAGCTCCGCCAACACC | + |
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Preference number: 4 (lower is better) Translates to: EADLSWKHHPLTLTKGAQYCTTC*GSSANT Trigger: GGTGTTGGCGGAGCTGCCTCAGCAAGTAGTGCAGTA...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS-3UTR CCA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGGCAAACCGGGCCACATaGTTGACGATCGGGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: EADLSWKHHPLTLTKGAQANRAT*LTIGEK Trigger: CTTCTCCCCGATCGTCAACCATGTGGCCCGGTTTGC...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS-3UTR TCA 90 bp | GGAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAACACCAACGGGACAGTaGATGGTTTCCACACCGGGT | + |
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Preference number: 4 (lower is better) Translates to: GSRFVLEASSIDSDKGSPTPTGQ*MVSTPG Trigger: ACCCGGTGTGGAAACCATTCACTGTCCCGTTGGTGT...TGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS-3UTR CCA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGTACGCCCTTCCCCGCTaGCTTGTCATTCATCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: EADLSWKHHPLTLTKGAQYALPR*LVIHQQ Trigger: CTGCTGATGAATGACAAGCCAGCGGGGAAGGGCGTA...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS-3UTR CCA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGCAACGGGACAGTGAATaGTTTCCACACCGGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: EADLSWKHHPLTLTKGAQQRDSE*FPHRVQ Trigger: CTGGACCCGGTGTGGAAACCATTCACTGTCCCGTTG...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS-3UTR CCA 90 bp | GGAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCACAACGGGACAGTGAATaGTTTCCACACCGGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: GSRFVLEASSIDSDKGSPQRDSE*FPHRVQ Trigger: CTGGACCCGGTGTGGAAACCATTCACTGTCCCGTTG...TGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS-3UTR CCA 90 bp | GGAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCACAGTCTGGTGGTAACTaGGCCCCAAATCCCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: GSRFVLEASSIDSDKGSPQSGGN*APNPRA Trigger: TGCTCTGGGATTTGGGGCCCAGTTACCACCAGACTG...TGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS-3UTR CCA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGCAGTCTGGTGGTAACTaGGCCCCAAATCCCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: EADLSWKHHPLTLTKGAQQSGGN*APNPRA Trigger: TGCTCTGGGATTTGGGGCCCAGTTACCACCAGACTG...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS-3UTR TCA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGTCTGGAACTCGCCGATaGAGTCATGGCCTCCATTAC | + |
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Preference number: 4 (lower is better) Translates to: EADLSWKHHPLTLTKGAQSGTRR*SHGLHY Trigger: GTAATGGAGGCCATGACTTCATCGGCGAGTTCCAGA...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS-3UTR TCA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGTGTCGTAGTCCTGAATaGTCTGTCCCACTGCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: EADLSWKHHPLTLTKGAQCRSPE*SVPLPR Trigger: TCTGGGCAGTGGGACAGATCATTCAGGACTACGACA...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS-3UTR CCA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGCTTCTTGGAGAAGGCTaGGTTGAGGTTGTTGACGGC | + |
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Preference number: 4 (lower is better) Translates to: EADLSWKHHPLTLTKGAQLLGEG*VEVVDG Trigger: GCCGTCAACAACCTCAACCCAGCCTTCTCCAAGAAG...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS-3UTR CCA 90 bp | GGAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCATCATGCTCATCCAACTaGGCACTGGACTTGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: GSRFVLEASSIDSDKGSPSCSSN*ALDLSW Trigger: CCAGGACAAGTCCAGTGCCCAGTTGGATGAGCATGA...TGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS-3UTR CCA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGTCATGCTCATCCAACTaGGCACTGGACTTGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: EADLSWKHHPLTLTKGAQSCSSN*ALDLSW Trigger: CCAGGACAAGTCCAGTGCCCAGTTGGATGAGCATGA...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS-3UTR CCA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGAGGCTGCAGGAGAACTaGCCCAGGAAATCATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EADLSWKHHPLTLTKGAQRLQEN*PRKSCS Trigger: TGAGCATGATTTCCTGGGCCAGTTCTCCTGCAGCCT...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCATGCAGCACAGAGGTCTaGAACTCGCCGATGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSRFVLEASSIDSDKGSPCSTEV*NSPMKS Trigger: TGACTTCATCGGCGAGTTCCAGACCTCTGTGCTGCA...TGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR CCA 90 bp | TCCACGCCTGAGCAGAAAGGGTTAGTGGGGTTGAAGTTGATAGCGAACTCATGGTGCAGCACAGAGGTCTaGAACTCGCCGATGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: STPEQKGLVGLKLIANSWCSTEV*NSPMKS Trigger: TGACTTCATCGGCGAGTTCCAGACCTCTGTGCTGCA...CCATGAGTTCGCTATCAACTTCAACCCCACTAACCCTTTCTGCTCAGGCGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212550.2 |
||
| CDS-3UTR GCA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGCTGACAGCTCCACTTTaGACACACAGCACTGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: EADLSWKHHPLTLTKGAQLTAPL*THSTEN Trigger: GTTCTCAGTGCTGTGTGTGCAAAGTGGAGCTGTCAG...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR GCA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGGGACCAGCATCCATTTaGCATCATCTCCTGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EADLSWKHHPLTLTKGAQGPASI*HHLLAC Trigger: ACAAGCCAGGAGATGATGGCAAATGGATGCTGGTCC...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR CCA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGATCACCTCGGTCCTATaGACCAGCATCCATTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EADLSWKHHPLTLTKGAQITSVL*TSIHLP Trigger: TGGCAAATGGATGCTGGTCCATAGGACCGAGGTGAT...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR CCA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGGTCCCACTGCCCAGATaGCTGACAAGTATTCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: EADLSWKHHPLTLTKGAQVPLPR*LTSIHW Trigger: CCAATGAATACTTGTCAGCCATCTGGGCAGTGGGAC...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR CCA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGTCGGGGAGAAGTTTGTaGGGCCATAGAAGCGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: EADLSWKHHPLTLTKGAQSGRSL*GHRSEC Trigger: ACATTCGCTTCTATGGCCCCACAAACTTCTCCCCGA...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCATCGGGGAGAAGTTTGTaGGGCCATAGAAGCGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: GSRFVLEASSIDSDKGSPSGRSL*GHRSEC Trigger: ACATTCGCTTCTATGGCCCCACAAACTTCTCCCCGA...TGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCACTCAAGAAAAGGGTCTaGCTTCCCAAAGAGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GSRFVLEASSIDSDKGSPLKKRV*LPKEVL Trigger: AAGGACCTCTTTGGGAAGTCAGACCCTTTTCTTGAG...TGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR TCA 90 bp | AGTAAGGGATATACATTCCTTCTTGCAGCTAGTTACTTAGAAAAAGCCAGTTATGTGGGGCAGACAGGCTaGGTACGCCTGGGCGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SKGYTFLLAASYLEKASYVGQTG*VRLGDA Trigger: GGCATCGCCCAGGCGTACTCAGCCTGTCTGCCCCAC...ATAACTGGCTTTTTCTAAGTAACTAGCTGCAAGAAGGAATGTATATCCCTTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
||
| CDS-3UTR GCA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGCTTTTCTTCTTCCTCTaGTTCTTGGGGTTGATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: EADLSWKHHPLTLTKGAQLFFFL*FLGLMH Trigger: GTGCATCAACCCCAAGAAGCAGAGGAAGAAGAAAAG...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR GCA 90 bp | ATGCCATCCACGCCTGAGCAGAAAGGGTTAGTGGGGTTGAAGTTGATAGCGAACCTTTTCTTCTTCCTCTaGTTCTTGGGGTTGATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: MPSTPEQKGLVGLKLIANLFFFL*FLGLMH Trigger: GTGCATCAACCCCAAGAAGCAGAGGAAGAAGAAAAG...GTTCGCTATCAACTTCAACCCCACTAACCCTTTCTGCTCAGGCGTGGATGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000212550.2 |
||
| CDS-3UTR TCA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGTCGGTGTATCTTGCATaGTCTCAGAATAATGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: EADLSWKHHPLTLTKGAQSVYLA*SQNNDA Trigger: GGCATCATTATTCTGAGATCATGCAAGATACACCGA...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCATCGGTGTATCTTGCATaGTCTCAGAATAATGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: GSRFVLEASSIDSDKGSPSVYLA*SQNNDA Trigger: GGCATCATTATTCTGAGATCATGCAAGATACACCGA...TGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR CCA 90 bp | AGTCACAAGTATAAAAACAGCAGACCACCATACAAAGTATGCAGTAAGGGATATCAGGCTGAGTACGCCTaGGCGATGCCATCCACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SHKYKNSRPPYKVCSKGYQAEYA*AMPSTP Trigger: AGGCGTGGATGGCATCGCCCAGGCGTACTCAGCCTG...ATATCCCTTACTGCATACTTTGTATGGTGGTCTGCTGTTTTTATACTTGTGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
||
| CDS-3UTR CCA 90 bp | AGTAAGGGATATACATTCCTTCTTGCAGCTAGTTACTTAGAAAAAGCCAGTTATTGCTGCTGGGTGGCCTaGGCTGCAAACCGGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SKGYTFLLAASYLEKASYCCWVA*AANRAT Trigger: TGTGGCCCGGTTTGCAGCCCAGGCCACCCAGCAGCA...ATAACTGGCTTTTTCTAAGTAACTAGCTGCAAGAAGGAATGTATATCCCTTACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
||
| CDS-3UTR CCA 90 bp | AAGTATAAAAACAGCAGACCACCATACAAAGTATGCAGTAAGGGATATACATTCCTGTCTGCTGCTGGGTaGCCTGGGCTGCAAACCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KYKNSRPPYKVCSKGYTFLSAAG*PGLQTG Trigger: CCCGGTTTGCAGCCCAGGCCACCCAGCAGCAGACAG...GAATGTATATCCCTTACTGCATACTTTGTATGGTGGTCTGCTGTTTTTATACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
||
| CDS-3UTR TCA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGGCAGGTTTTTATGCTTaGAATACTGCACTACTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EADLSWKHHPLTLTKGAQAGFYA*NTALLA Trigger: AGCAAGTAGTGCAGTATTTCAAGCATAAAAACCTGC...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR GCA 90 bp | AAGTATAAAAACAGCAGACCACCATACAAAGTATGCAGTAAGGGATATACATTCGCCTGCACCACGGCGTaGCGAGTCTCCTCCATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KYKNSRPPYKVCSKGYTFACTTA*RVSSMS Trigger: TGACATGGAGGAGACTCGGCACGCCGTGGTGCAGGC...GAATGTATATCCCTTACTGCATACTTTGTATGGTGGTCTGCTGTTTTTATACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
||
| CDS-3UTR TCA 90 bp | AGTCACAAGTATAAAAACAGCAGACCACCATACAAAGTATGCAGTAAGGGATATTTGCACACACAGCACTaGGAACCCAAGGGGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SHKYKNSRPPYKVCSKGYLHTQH*EPKGMA Trigger: GGCCATCCCCTTGGGTTCTCAGTGCTGTGTGTGCAA...ATATCCCTTACTGCATACTTTGTATGGTGGTCTGCTGTTTTTATACTTGTGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
||
| CDS-3UTR GCA 90 bp | AGTAAGGGATATACATTCCTTCTTGCAGCTAGTTACTTAGAAAAAGCCAGTTATAGTACGCCTGGGCGATaGCATCCACGCCTGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SKGYTFLLAASYLEKASYSTPGR*HPRLSR Trigger: TCTGCTCAGGCGTGGATGGCATCGCCCAGGCGTACT...ATAACTGGCTTTTTCTAAGTAACTAGCTGCAAGAAGGAATGTATATCCCTTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
||
| CDS-3UTR CCA 90 bp | GGAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCATTTGCCATCATCTCCTaGCTTGTAAAACTCAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GSRFVLEASSIDSDKGSPFAIIS*LVKLKK Trigger: TTTCTTGAGTTTTACAAGCCAGGAGATGATGGCAAA...TGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR CCA 90 bp | AGTCACAAGTATAAAAACAGCAGACCACCATACAAAGTATGCAGTAAGGGATATGCAAACCGGGCCACATaGTTGACGATCGGGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SHKYKNSRPPYKVCSKGYANRAT*LTIGEK Trigger: CTTCTCCCCGATCGTCAACCATGTGGCCCGGTTTGC...ATATCCCTTACTGCATACTTTGTATGGTGGTCTGCTGTTTTTATACTTGTGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
||
| CDS-3UTR CCA 90 bp | AGTAAGGGATATACATTCCTTCTTGCAGCTAGTTACTTAGAAAAAGCCAGTTATGTTGCTGTCTGCTGCTaGGTGGCCTGGGCTGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SKGYTFLLAASYLEKASYVAVCC*VAWAAN Trigger: GTTTGCAGCCCAGGCCACCCAGCAGCAGACAGCAAC...ATAACTGGCTTTTTCTAAGTAACTAGCTGCAAGAAGGAATGTATATCCCTTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
||
| CDS-3UTR CCA 90 bp | AGTCACAAGTATAAAAACAGCAGACCACCATACAAAGTATGCAGTAAGGGATATTACGCCCTTCCCCGCTaGCTTGTCATTCATCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SHKYKNSRPPYKVCSKGYYALPR*LVIHQQ Trigger: CTGCTGATGAATGACAAGCCAGCGGGGAAGGGCGTA...ATATCCCTTACTGCATACTTTGTATGGTGGTCTGCTGTTTTTATACTTGTGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
||
| CDS-3UTR GCA 90 bp | AAGTATAAAAACAGCAGACCACCATACAAAGTATGCAGTAAGGGATATACATTCTGCTGGAGACAATCGTaGCCAGGCTGCAGGAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: KYKNSRPPYKVCSKGYTFCWRQS*PGCRRT Trigger: AGTTCTCCTGCAGCCTGGGCACGATTGTCTCCAGCA...GAATGTATATCCCTTACTGCATACTTTGTATGGTGGTCTGCTGTTTTTATACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
||
| CDS-3UTR GCA 90 bp | AGTAAGGGATATACATTCCTTCTTGCAGCTAGTTACTTAGAAAAAGCCAGTTATGATGAAGTACTGCGTTaGTGTCTGCTGCTGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SKGYTFLLAASYLEKASYDEVLR*CLLLGG Trigger: GCCACCCAGCAGCAGACAGCAACGCAGTACTTCATC...ATAACTGGCTTTTTCTAAGTAACTAGCTGCAAGAAGGAATGTATATCCCTTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
||
| CDS-3UTR CCA 90 bp | AGTCACAAGTATAAAAACAGCAGACCACCATACAAAGTATGCAGTAAGGGATATCTTCTTGGAGAAGGCTaGGTTGAGGTTGTTGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: SHKYKNSRPPYKVCSKGYLLGEG*VEVVDG Trigger: GCCGTCAACAACCTCAACCCAGCCTTCTCCAAGAAG...ATATCCCTTACTGCATACTTTGTATGGTGGTCTGCTGTTTTTATACTTGTGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
||
| CDS-3UTR TCA 90 bp | AGTAAGGGATATACATTCCTTCTTGCAGCTAGTTACTTAGAAAAAGCCAGTTATTGTCGTAGTCCTGAATaGTCTGTCCCACTGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SKGYTFLLAASYLEKASYCRSPE*SVPLPR Trigger: TCTGGGCAGTGGGACAGATCATTCAGGACTACGACA...ATAACTGGCTTTTTCTAAGTAACTAGCTGCAAGAAGGAATGTATATCCCTTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
||
| CDS-3UTR GCA 90 bp | AAGTATAAAAACAGCAGACCACCATACAAAGTATGCAGTAAGGGATATACATTCAGGAGGATGAAGTACTaGGTTGCTGTCTGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KYKNSRPPYKVCSKGYTFRRMKY*VAVCCW Trigger: CCAGCAGCAGACAGCAACGCAGTACTTCATCCTCCT...GAATGTATATCCCTTACTGCATACTTTGTATGGTGGTCTGCTGTTTTTATACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
||
| CDS-3UTR CCA 90 bp | AAGTATAAAAACAGCAGACCACCATACAAAGTATGCAGTAAGGGATATACATTCGCACTGGACTTGTCCTaGTCAAACAGGGCGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: KYKNSRPPYKVCSKGYTFALDLS*SNRANL Trigger: CAAGTTCGCCCTGTTTGACCAGGACAAGTCCAGTGC...GAATGTATATCCCTTACTGCATACTTTGTATGGTGGTCTGCTGTTTTTATACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
||
| CDS-3UTR CCA 90 bp | AAGTATAAAAACAGCAGACCACCATACAAAGTATGCAGTAAGGGATATACATTCAGGCTGCAGGAGAACTaGCCCAGGAAATCATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KYKNSRPPYKVCSKGYTFRLQEN*PRKSCS Trigger: TGAGCATGATTTCCTGGGCCAGTTCTCCTGCAGCCT...GAATGTATATCCCTTACTGCATACTTTGTATGGTGGTCTGCTGTTTTTATACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
||
| CDS-3UTR TCA 90 bp | AGTCACAAGTATAAAAACAGCAGACCACCATACAAAGTATGCAGTAAGGGATATCTCAAGAAAAGGGTCTaGCTTCCCAAAGAGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SHKYKNSRPPYKVCSKGYLKKRV*LPKEVL Trigger: AAGGACCTCTTTGGGAAGTCAGACCCTTTTCTTGAG...ATATCCCTTACTGCATACTTTGTATGGTGGTCTGCTGTTTTTATACTTGTGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
||
| CDS-3UTR GCA 90 bp | AAGTATAAAAACAGCAGACCACCATACAAAGTATGCAGTAAGGGATATACATTCCTGACAGCTCCACTTTaGACACACAGCACTGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KYKNSRPPYKVCSKGYTFLTAPL*THSTEN Trigger: GTTCTCAGTGCTGTGTGTGCAAAGTGGAGCTGTCAG...GAATGTATATCCCTTACTGCATACTTTGTATGGTGGTCTGCTGTTTTTATACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
||
| CDS-3UTR GCA 90 bp | AGTAAGGGATATACATTCCTTCTTGCAGCTAGTTACTTAGAAAAAGCCAGTTATGGACCAGCATCCATTTaGCATCATCTCCTGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SKGYTFLLAASYLEKASYGPASI*HHLLAC Trigger: ACAAGCCAGGAGATGATGGCAAATGGATGCTGGTCC...ATAACTGGCTTTTTCTAAGTAACTAGCTGCAAGAAGGAATGTATATCCCTTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
||
| CDS-3UTR GCA 90 bp | AAGTATAAAAACAGCAGACCACCATACAAAGTATGCAGTAAGGGATATACATTCCTTTTCTTCTTCCTCTaGTTCTTGGGGTTGATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KYKNSRPPYKVCSKGYTFLFFFL*FLGLMH Trigger: GTGCATCAACCCCAAGAAGCAGAGGAAGAAGAAAAG...GAATGTATATCCCTTACTGCATACTTTGTATGGTGGTCTGCTGTTTTTATACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
||
| CDS-3UTR CCA 90 bp | AGTAAGGGATATACATTCCTTCTTGCAGCTAGTTACTTAGAAAAAGCCAGTTATTTTGCCATCATCTCCTaGCTTGTAAAACTCAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SKGYTFLLAASYLEKASYFAIIS*LVKLKK Trigger: TTTCTTGAGTTTTACAAGCCAGGAGATGATGGCAAA...ATAACTGGCTTTTTCTAAGTAACTAGCTGCAAGAAGGAATGTATATCCCTTACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
||
| CDS GCA 90 bp | ATGCACTCTATCTCCAGCGGGACACCATCCCGAGCCTCGCTCATCTaGAGCACAGAGGTCTGGAACTCGCCGATGAAGTCATGGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: MHSISSGTPSRASLI*STEVWNSPMKSWPP Trigger: TGGAGGCCATGACTTCATCGGCGAGTTCCAGACCTCTGTGCTGCAGATGAGCGAGGCTCGGGATGGTGTCCCGCTGGAGATAGAGTGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 ENSMUST00000212550.2 |
||
| CDS TCA 90 bp | ATCCAGTTTCCTGCCAGCCAGGCTCAGTGTGATGACTCGGTTGTCTaGCAGCTCTTGGGCTGCAATCGTGATTACGCCCTTCCCCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IQFPASQAQCDDSVV*QLLGCNRDYALPRW Trigger: CCAGCGGGGAAGGGCGTAATCACGATTGCAGCCCAAGAGCTGTCAGACAACCGAGTCATCACACTGAGCCTGGCTGGCAGGAAACTGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR CAA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGATGGACATGGGCAGCTaGGAGGCCTGCACCACGGCG | + |
|
Preference number: 5 (lower is better) Translates to: EADLSWKHHPLTLTKGAQMDMGS*EACTTA Trigger: CGCCGTGGTGCAGGCCTCCAAGCTGCCCATGTCCAT...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS CCA 90 bp | TGGCCCAGGAAATCATGCTCATCCAACTGGGCACTGGACTTGTCCTaGTCAAACAGGGCGAACTTGAGCTTCTGCACCTCCTCGAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WPRKSCSSNWALDLS*SNRANLSFCTSSKW Trigger: CCACTTCGAGGAGGTGCAGAAGCTCAAGTTCGCCCTGTTTGACCAGGACAAGTCCAGTGCCCAGTTGGATGAGCATGATTTCCTGGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCACAGAAAGGGTCAGACTaGGAGGTGACATCCCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSRFVLEASSIDSDKGSPQKGSD*EVTSRS Trigger: GGACCGGGATGTCACCTCCAAGTCTGACCCTTTCTG...TGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR CAA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGAACTGGGCACTGGACTaGTCCTGGTCAAACAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: EADLSWKHHPLTLTKGAQNWALD*SWSNRA Trigger: CGCCCTGTTTGACCAGGACAAGTCCAGTGCCCAGTT...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR CAA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGCCCTTCCCCGCTGGCTaGTCATTCATCAGCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: EADLSWKHHPLTLTKGAQPFPAG*SFISSR Trigger: TCTGCTGCTGATGAATGACAAGCCAGCGGGGAAGGG...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCATCCAGCACGAACTTCTaGGAGAAGGCTGGGTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSRFVLEASSIDSDKGSPSSTNF*EKAGLR Trigger: CCTCAACCCAGCCTTCTCCAAGAAGTTCGTGCTGGA...TGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR CAA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGTCCAGCACGAACTTCTaGGAGAAGGCTGGGTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: EADLSWKHHPLTLTKGAQSSTNF*EKAGLR Trigger: CCTCAACCCAGCCTTCTCCAAGAAGTTCGTGCTGGA...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGGCCTAGTGATCTTCTaGCTGGAGACAATCGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GSRFVLEASSIDSDKGSPGLVIF*LETIVP Trigger: GGGCACGATTGTCTCCAGCAAGAAGATCACTAGGCC...TGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAAACCGGGCCACATGGTaGACGATCGGGGAGAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GSRFVLEASSIDSDKGSPNRATW*TIGEKF Trigger: AAACTTCTCCCCGATCGTCAACCATGTGGCCCGGTT...TGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR CAA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGAACCGGGCCACATGGTaGACGATCGGGGAGAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: EADLSWKHHPLTLTKGAQNRATW*TIGEKF Trigger: AAACTTCTCCCCGATCGTCAACCATGTGGCCCGGTT...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS TCA 90 bp | CCACTGCCCAGATGGCTGACAAGTATTCATTGGTGCCCATGGGGTTaGTATAATGGAGAGAAGAAGGGTCGAGGGGATTCCCATTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PLPRWLTSIHWCPWG*YNGEKKGRGDSHWR Trigger: CCTCCAATGGGAATCCCCTCGACCCTTCTTCTCTCCATTATATCAACCCCATGGGCACCAATGAATACTTGTCAGCCATCTGGGCAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR CAA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGGCTGGGTTGAGGTTGTaGACGGCTGTTTCTGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: EADLSWKHHPLTLTKGAQAGLRL*TAVSVL Trigger: CAGAACAGAAACAGCCGTCAACAACCTCAACCCAGC...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR CAA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGTTGGAGAAGGCTGGGTaGAGGTTGTTGACGGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: EADLSWKHHPLTLTKGAQLEKAG*RLLTAV Trigger: AACAGCCGTCAACAACCTCAACCCAGCCTTCTCCAA...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAAGTGTGATGACTCGGTaGTCTGACAGCTCTTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GSRFVLEASSIDSDKGSPSVMTR*SDSSWA Trigger: AGCCCAAGAGCTGTCAGACAACCGAGTCATCACACT...TGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCATGGACCAGCATCCATTaGCCATCATCTCCTGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GSRFVLEASSIDSDKGSPWTSIH*PSSPGL Trigger: CAAGCCAGGAGATGATGGCAAATGGATGCTGGTCCA...TGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR CAA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGTGGACCAGCATCCATTaGCCATCATCTCCTGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: EADLSWKHHPLTLTKGAQWTSIH*PSSPGL Trigger: CAAGCCAGGAGATGATGGCAAATGGATGCTGGTCCA...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGAAATACTGCACTACTaGCTGAGGCAGCTCCGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: GSRFVLEASSIDSDKGSPEILHY*LRQLRQ Trigger: TTGGCGGAGCTGCCTCAGCAAGTAGTGCAGTATTTC...TGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR CAA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGTCGAGGGGATTCCCATaGGAGGCTGTGAAGTCTATT | + |
|
Preference number: 5 (lower is better) Translates to: EADLSWKHHPLTLTKGAQSRGFP*EAVKSI Trigger: AATAGACTTCACAGCCTCCAATGGGAATCCCCTCGA...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR CAA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGTTAGTGGGGTTGAAGTaGATAGCGAACTCATGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: EADLSWKHHPLTLTKGAQLVGLK*IANSWD Trigger: GTCCCATGAGTTCGCTATCAACTTCAACCCCACTAA...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR CAA 90 bp | GAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGTCCATCCACCTGCCATaGTCTTCTATAAAGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: EADLSWKHHPLTLTKGAQSIHLP*SSIKRT Trigger: TGTCCTCTTTATAGAAGACAATGGCAGGTGGATGGA...CTGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR CAA 90 bp | AGTAAGGGATATACATTCCTTCTTGCAGCTAGTTACTTAGAAAAAGCCAGTTATATGGACATGGGCAGCTaGGAGGCCTGCACCACGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SKGYTFLLAASYLEKASYMDMGS*EACTTA Trigger: CGCCGTGGTGCAGGCCTCCAAGCTGCCCATGTCCAT...ATAACTGGCTTTTTCTAAGTAACTAGCTGCAAGAAGGAATGTATATCCCTTACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
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| CDS-3UTR CAA 90 bp | GGAAGCCGATTTGTCCTGGAAGCATCATCCATTGACTCTGACAAAGGGAGCCCAGGCAGGTTTTTATGCTaGAAATACTGCACTACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GSRFVLEASSIDSDKGSPGRFLC*KYCTTC Trigger: GCAAGTAGTGCAGTATTTCAAGCATAAAAACCTGCC...TGGGCTCCCTTTGTCAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS-3UTR CAA 90 bp | AAGTATAAAAACAGCAGACCACCATACAAAGTATGCAGTAAGGGATATACATTCCCCTTCCCCGCTGGCTaGTCATTCATCAGCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KYKNSRPPYKVCSKGYTFPFPAG*SFISSR Trigger: TCTGCTGCTGATGAATGACAAGCCAGCGGGGAAGGG...GAATGTATATCCCTTACTGCATACTTTGTATGGTGGTCTGCTGTTTTTATACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
||
| CDS-3UTR CAA 90 bp | AAGTATAAAAACAGCAGACCACCATACAAAGTATGCAGTAAGGGATATACATTCGCTGGGTTGAGGTTGTaGACGGCTGTTTCTGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KYKNSRPPYKVCSKGYTFAGLRL*TAVSVL Trigger: CAGAACAGAAACAGCCGTCAACAACCTCAACCCAGC...GAATGTATATCCCTTACTGCATACTTTGTATGGTGGTCTGCTGTTTTTATACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
||
| CDS-3UTR CAA 90 bp | AGTAAGGGATATACATTCCTTCTTGCAGCTAGTTACTTAGAAAAAGCCAGTTATTTGGAGAAGGCTGGGTaGAGGTTGTTGACGGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SKGYTFLLAASYLEKASYLEKAG*RLLTAV Trigger: AACAGCCGTCAACAACCTCAACCCAGCCTTCTCCAA...ATAACTGGCTTTTTCTAAGTAACTAGCTGCAAGAAGGAATGTATATCCCTTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
||
| CDS-3UTR CAA 90 bp | AAGTATAAAAACAGCAGACCACCATACAAAGTATGCAGTAAGGGATATACATTCAGTGTGATGACTCGGTaGTCTGACAGCTCTTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KYKNSRPPYKVCSKGYTFSVMTR*SDSSWA Trigger: AGCCCAAGAGCTGTCAGACAACCGAGTCATCACACT...GAATGTATATCCCTTACTGCATACTTTGTATGGTGGTCTGCTGTTTTTATACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
||
| CDS-3UTR CAA 90 bp | AGTAAGGGATATACATTCCTTCTTGCAGCTAGTTACTTAGAAAAAGCCAGTTATTCGAGGGGATTCCCATaGGAGGCTGTGAAGTCTATT | + |
|
Preference number: 5 (lower is better) Translates to: SKGYTFLLAASYLEKASYSRGFP*EAVKSI Trigger: AATAGACTTCACAGCCTCCAATGGGAATCCCCTCGA...ATAACTGGCTTTTTCTAAGTAACTAGCTGCAAGAAGGAATGTATATCCCTTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
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| CDS-3UTR CAA 90 bp | AGTCACAAGTATAAAAACAGCAGACCACCATACAAAGTATGCAGTAAGGGATATTTAGTGGGGTTGAAGTaGATAGCGAACTCATGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SHKYKNSRPPYKVCSKGYLVGLK*IANSWD Trigger: GTCCCATGAGTTCGCTATCAACTTCAACCCCACTAA...ATATCCCTTACTGCATACTTTGTATGGTGGTCTGCTGTTTTTATACTTGTGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
||
| CDS-3UTR CAA 90 bp | AGTCACAAGTATAAAAACAGCAGACCACCATACAAAGTATGCAGTAAGGGATATTCCATCCACCTGCCATaGTCTTCTATAAAGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: SHKYKNSRPPYKVCSKGYSIHLP*SSIKRT Trigger: TGTCCTCTTTATAGAAGACAATGGCAGGTGGATGGA...ATATCCCTTACTGCATACTTTGTATGGTGGTCTGCTGTTTTTATACTTGTGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
||
| CDS-3UTR CAA 90 bp | AGTCACAAGTATAAAAACAGCAGACCACCATACAAAGTATGCAGTAAGGGATATGGCAGGTTTTTATGCTaGAAATACTGCACTACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SHKYKNSRPPYKVCSKGYGRFLC*KYCTTC Trigger: GCAAGTAGTGCAGTATTTCAAGCATAAAAACCTGCC...ATATCCCTTACTGCATACTTTGTATGGTGGTCTGCTGTTTTTATACTTGTGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048653.10 |
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| CDS CAA 72 bp | GCCGCCTCCTCGCCTGTGTGTGAGCGCAGTCGACGGTaGTCCCCGTCTAGAAACTCCATGGCTGCAAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: AASSPVCERSRR*SPSRNSMAAKS Trigger: TGACTTTGCAGCCATGGAGTTTCTAGACGGGGACAACCGTCGACTGCGCTCACACACAGGCGAGGAGGCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS CAA 90 bp | ATATCTCGGGCCGCCTCCTCGCCTGTGTGTGAGCGCAGTCGACGGTaGTCCCCGTCTAGAAACTCCATGGCTGCAAAGTCAGCATTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ISRAASSPVCERSRR*SPSRNSMAAKSALP Trigger: GGGCAATGCTGACTTTGCAGCCATGGAGTTTCTAGACGGGGACAACCGTCGACTGCGCTCACACACAGGCGAGGAGGCGGCCCGAGATAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS GCA 72 bp | CCAGCAGGTTCTGGCCACTCACTGACAGCTCCACTTTaGACACACAGCACTGAGAACCCAAGGGGATGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PAGSGHSLTAPL*THSTENPRGWP Trigger: GGGCCATCCCCTTGGGTTCTCAGTGCTGTGTGTGCAAAGTGGAGCTGTCAGTGAGTGGCCAGAACCTGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS GCA 72 bp | ATCTCCAGCGGGACACCATCCCGAGCCTCGCTCATCTaGAGCACAGAGGTCTGGAACTCGCCGATGAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: ISSGTPSRASLI*STEVWNSPMKS Trigger: TGACTTCATCGGCGAGTTCCAGACCTCTGTGCTGCAGATGAGCGAGGCTCGGGATGGTGTCCCGCTGGAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 ENSMUST00000212550.2 |
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| CDS TCA 72 bp | GGTGACATCCCGGTCCAGCAGGTTCTGGCCACTCACTaGCAGCTCCACTTTGCACACACAGCACTGAGAACC | + |
|
Preference number: 6 (lower is better) Translates to: GDIPVQQVLATH*QLHFAHTALRT Trigger: GGTTCTCAGTGCTGTGTGTGCAAAGTGGAGCTGTCAGTGAGTGGCCAGAACCTGCTGGACCGGGATGTCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS CCA 72 bp | AGGCTCAGTGTGATGACTCGGTTGTCTGACAGCTCTTaGGCTGCAATCGTGATTACGCCCTTCCCCGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RLSVMTRLSDSS*AAIVITPFPAG Trigger: GCCAGCGGGGAAGGGCGTAATCACGATTGCAGCCCAAGAGCTGTCAGACAACCGAGTCATCACACTGAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS TCA 72 bp | CCTGCCAGCCAGGCTCAGTGTGATGACTCGGTTGTCTaGCAGCTCTTGGGCTGCAATCGTGATTACGCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: PASQAQCDDSVV*QLLGCNRDYAL Trigger: AAGGGCGTAATCACGATTGCAGCCCAAGAGCTGTCAGACAACCGAGTCATCACACTGAGCCTGGCTGGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS CCA 72 bp | TCAGACTTGGAGGTGACATCCCGGTCCAGCAGGTTCTaGCCACTCACTGACAGCTCCACTTTGCACACACAG | + |
|
Preference number: 6 (lower is better) Translates to: SDLEVTSRSSRF*PLTDSSTLHTQ Trigger: CTGTGTGTGCAAAGTGGAGCTGTCAGTGAGTGGCCAGAACCTGCTGGACCGGGATGTCACCTCCAAGTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS CAA 90 bp | GACAGCTCTTGGGCTGCAATCGTGATTACGCCCTTCCCCGCTGGCTaGTCATTCATCAGCAGCAGAGGCCTAGTGATCTTCTTGCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: DSSWAAIVITPFPAG*SFISSRGLVIFLLE Trigger: CTCCAGCAAGAAGATCACTAGGCCTCTGCTGCTGATGAATGACAAGCCAGCGGGGAAGGGCGTAATCACGATTGCAGCCCAAGAGCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS CAA 72 bp | TGGGCTGCAATCGTGATTACGCCCTTCCCCGCTGGCTaGTCATTCATCAGCAGCAGAGGCCTAGTGATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: WAAIVITPFPAG*SFISSRGLVIF Trigger: GAAGATCACTAGGCCTCTGCTGCTGATGAATGACAAGCCAGCGGGGAAGGGCGTAATCACGATTGCAGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS CAA 90 bp | TTCTTATCCAGTTTCCTGCCAGCCAGGCTCAGTGTGATGACTCGGTaGTCTGACAGCTCTTGGGCTGCAATCGTGATTACGCCCTTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: FLSSFLPARLSVMTR*SDSSWAAIVITPFP Trigger: GGGGAAGGGCGTAATCACGATTGCAGCCCAAGAGCTGTCAGACAACCGAGTCATCACACTGAGCCTGGCTGGCAGGAAACTGGATAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS CCA 72 bp | ACCGGGTCCAGGGTGTACTTAATCACCTCGGTCCTATaGACCAGCATCCATTTGCCATCATCTCCTGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TGSRVYLITSVL*TSIHLPSSPGL Trigger: CAAGCCAGGAGATGATGGCAAATGGATGCTGGTCCATAGGACCGAGGTGATTAAGTACACCCTGGACCCGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS CAA 72 bp | CCCAGGAAATCATGCTCATCCAACTGGGCACTGGACTaGTCCTGGTCAAACAGGGCGAACTTGAGCTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PRKSCSSNWALD*SWSNRANLSFC Trigger: GCAGAAGCTCAAGTTCGCCCTGTTTGACCAGGACAAGTCCAGTGCCCAGTTGGATGAGCATGATTTCCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS CAA 72 bp | AGTTTCCTGCCAGCCAGGCTCAGTGTGATGACTCGGTaGTCTGACAGCTCTTGGGCTGCAATCGTGATTACG | + |
|
Preference number: 6 (lower is better) Translates to: SFLPARLSVMTR*SDSSWAAIVIT Trigger: CGTAATCACGATTGCAGCCCAAGAGCTGTCAGACAACCGAGTCATCACACTGAGCCTGGCTGGCAGGAAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS CAA 90 bp | CACCTGCCATTGTCTTCTATAAAGAGGACACAGAAAGGGTCAGACTaGGAGGTGACATCCCGGTCCAGCAGGTTCTGGCCACTCACTGAC | + |
|
Preference number: 6 (lower is better) Translates to: HLPLSSIKRTQKGSD*EVTSRSSRFWPLTD Trigger: GTCAGTGAGTGGCCAGAACCTGCTGGACCGGGATGTCACCTCCAAGTCTGACCCTTTCTGTGTCCTCTTTATAGAAGACAATGGCAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS CAA 72 bp | TTGTCATTCATCAGCAGCAGAGGCCTAGTGATCTTCTaGCTGGAGACAATCGTGCCCAGGCTGCAGGAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LSFISSRGLVIF*LETIVPRLQEN Trigger: GTTCTCCTGCAGCCTGGGCACGATTGTCTCCAGCAAGAAGATCACTAGGCCTCTGCTGCTGATGAATGACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS TCA 72 bp | GGCAGGTTTTTATGCTTGAAATACTGCACTACTTGCTaGGGCAGCTCCGCCAACACCGCTTTAGCCAGCGTT | + |
|
Preference number: 6 (lower is better) Translates to: GRFLCLKYCTTC*GSSANTALASV Trigger: AACGCTGGCTAAAGCGGTGTTGGCGGAGCTGCCTCAGCAAGTAGTGCAGTATTTCAAGCATAAAAACCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS CCA 72 bp | GAAGTGGTAGTCCAGCACGAACTTCTTGGAGAAGGCTaGGTTGAGGTTGTTGACGGCTGTTTCTGTTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: EVVVQHELLGEG*VEVVDGCFCSV Trigger: GACAGAACAGAAACAGCCGTCAACAACCTCAACCCAGCCTTCTCCAAGAAGTTCGTGCTGGACTACCACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS CAA 72 bp | TTGTCTTCTATAAAGAGGACACAGAAAGGGTCAGACTaGGAGGTGACATCCCGGTCCAGCAGGTTCTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LSSIKRTQKGSD*EVTSRSSRFWP Trigger: TGGCCAGAACCTGCTGGACCGGGATGTCACCTCCAAGTCTGACCCTTTCTGTGTCCTCTTTATAGAAGACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS CAA 72 bp | AGCACGAACTTCTTGGAGAAGGCTGGGTTGAGGTTGTaGACGGCTGTTTCTGTTCTGTCGAACTCCATCCAC | + |
|
Preference number: 6 (lower is better) Translates to: STNFLEKAGLRL*TAVSVLSNSIH Trigger: GTGGATGGAGTTCGACAGAACAGAAACAGCCGTCAACAACCTCAACCCAGCCTTCTCCAAGAAGTTCGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
||
| CDS CAA 72 bp | TCCAGCACGAACTTCTTGGAGAAGGCTGGGTTGAGGTaGTTGACGGCTGTTTCTGTTCTGTCGAACTCCATC | + |
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Preference number: 6 (lower is better) Translates to: SSTNFLEKAGLR*LTAVSVLSNSI Trigger: GATGGAGTTCGACAGAACAGAAACAGCCGTCAACAACCTCAACCCAGCCTTCTCCAAGAAGTTCGTGCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS TCA 72 bp | AGATGGCTGACAAGTATTCATTGGTGCCCATGGGGTTaGTATAATGGAGAGAAGAAGGGTCGAGGGGATTCC | + |
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Preference number: 6 (lower is better) Translates to: RWLTSIHWCPWG*YNGEKKGRGDS Trigger: GGAATCCCCTCGACCCTTCTTCTCTCCATTATATCAACCCCATGGGCACCAATGAATACTTGTCAGCCATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS TCA 72 bp | GTAGTCCTGAATGATCTGTCCCACTGCCCAGATGGCTaGCAAGTATTCATTGGTGCCCATGGGGTTGATATA | + |
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Preference number: 6 (lower is better) Translates to: VVLNDLSHCPDG*QVFIGAHGVDI Trigger: TATATCAACCCCATGGGCACCAATGAATACTTGTCAGCCATCTGGGCAGTGGGACAGATCATTCAGGACTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS CAA 90 bp | TTGTTGACGGCTGTTTCTGTTCTGTCGAACTCCATCCACCTGCCATaGTCTTCTATAAAGAGGACACAGAAAGGGTCAGACTTGGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: LLTAVSVLSNSIHLP*SSIKRTQKGSDLEV Trigger: CACCTCCAAGTCTGACCCTTTCTGTGTCCTCTTTATAGAAGACAATGGCAGGTGGATGGAGTTCGACAGAACAGAAACAGCCGTCAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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| CDS CAA 72 bp | GCTGTTTCTGTTCTGTCGAACTCCATCCACCTGCCATaGTCTTCTATAAAGAGGACACAGAAAGGGTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: AVSVLSNSIHLP*SSIKRTQKGSD Trigger: GTCTGACCCTTTCTGTGTCCTCTTTATAGAAGACAATGGCAGGTGGATGGAGTTCGACAGAACAGAAACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048653.10 ENSMUST00000109537.2 |
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