Pregenerated sensors for CPN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025196Ensembl transcript IDs: ENSMUST00000026210.5
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTAAATCTGTCCCAGATAATAAAAGAGAAGCGTGATCAAGGGGTTTaGGAGCAGGGATGGCCTCGCTGTGTGTGGTCCTGGGTGCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: LNLSQIIKEKRDQGV*EQGWPRCVWSWVLA Trigger: AGCCAGCACCCAGGACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGATCACGCTTCTCTTTTATTATCTGGGACAGATTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| 3UTR TCA 90 bp | TATGTGTCTGTGTCTAAATCTGTCCCAGATAATAAAAGAGAAGCGTaGTCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTC | + |
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Preference number: 1 (lower is better) Translates to: YVSVSKSVPDNKREA*SRGLRAGMASLCVV Trigger: GACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGATCACGCTTCTCTTTTATTATCTGGGACAGATTTAGACACAGACACATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| 3UTR CCA 72 bp | CTAAGGAAGGCTGGATCCCGGGGCAGACAGAGACACTaGGAGGTGTTCTGTATGTGTCTGTGTCTAAATCTG | + |
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Preference number: 3 (lower is better) Translates to: LRKAGSRGRQRH*EVFCMCLCLNL Trigger: CAGATTTAGACACAGACACATACAGAACACCTCCCAGTGTCTCTGTCTGCCCCGGGATCCAGCCTTCCTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| 3UTR TCA 72 bp | GTGTCTAAATCTGTCCCAGATAATAAAAGAGAAGCGTaGTCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTG | + |
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Preference number: 3 (lower is better) Translates to: VSKSVPDNKREA*SRGLRAGMASL Trigger: CAGCGAGGCCATCCCTGCTCTCAAACCCCTTGATCACGCTTCTCTTTTATTATCTGGGACAGATTTAGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR GCA 90 bp | TCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTCCTGGGTGCTGGCTTTGCCCTGCCTCCCTaGCCTCGGCCGGGAGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: SRGLRAGMASLCVVLGAGFALPP*PRPGAL Trigger: GAGAGCTCCCGGCCGAGGGCAGGGAGGCAGGGCAAA...GCCAGCACCCAGGACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR GCA 90 bp | TCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTCCTGGGTGCTGGCCCCAGCCACTCCCTCTaGAGCTCCTCTTGCCGGGGA | + |
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Preference number: 4 (lower is better) Translates to: SRGLRAGMASLCVVLGAGPSHSL*SSSCRG Trigger: TCCCCGGCAAGAGGAGCTGCAGAGGGAGTGGCTGGG...GCCAGCACCCAGGACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR GCA 90 bp | AGCGTGATCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTCCTGGGTGTCCGGGGCTGCTTTaGCCTGCCTCCCTGCCCTCG | + |
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Preference number: 4 (lower is better) Translates to: SVIKGFESRDGLAVCGPGCPGLL*PASLPS Trigger: CGAGGGCAGGGAGGCAGGGCAAAGCAGCCCCGGACA...CCCAGGACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGATCACGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR GCA 90 bp | TCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTCCTGGGTGCTGGCCTGGATGTCCGGGGCTaGTTTGCCCTGCCTCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SRGLRAGMASLCVVLGAGLDVRG*FALPPC Trigger: GCAGGGAGGCAGGGCAAAGCAGCCCCGGACATCCAG...GCCAGCACCCAGGACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR CCA 90 bp | TCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTCCTGGGTGCTGGCTCGGGGAGGGGCAGGTaGTGGTTAGGGCCACCGTTC | + |
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Preference number: 4 (lower is better) Translates to: SRGLRAGMASLCVVLGAGSGRGR*WLGPPF Trigger: GAACGGTGGCCCTAACCACCACCTGCCCCTCCCCGA...GCCAGCACCCAGGACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR GCA 90 bp | AAGAGAAGCGTGATCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTGGGGCTGCTTTGCCCTaGCTCCCTGCCCTCGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: KRSVIKGFESRDGLAVCGGAALP*LPALGR Trigger: CCGGCCGAGGGCAGGGAGGCAGGGCAAAGCAGCCCC...ACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGATCACGCTTCTCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR GCA 90 bp | TCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTCCTGGGTGCTGGCAGGAATTCCGACAGCTaGAGAAGCAGCTCGCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: SRGLRAGMASLCVVLGAGRNSDS*RSSSRP Trigger: GGGCCGCGAGCTGCTTCTGCAGCTGTCGGAATTCCT...GCCAGCACCCAGGACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR CCA 90 bp | AGCGTGATCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTCCTGGGGGGAGGGGCAGGTGGTaGTTAGGGCCACCGTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: SVIKGFESRDGLAVCGPGGRGRW*LGPPFL Trigger: CAAGAACGGTGGCCCTAACCACCACCTGCCCCTCCC...CCCAGGACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGATCACGCT 62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR TCA 90 bp | TCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTCCTGGGTGCTGGCCTTGCATTCCCTTGCTaGGAGAATACCAGGACGCCC | + |
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Preference number: 4 (lower is better) Translates to: SRGLRAGMASLCVVLGAGLAFPC*ENTRTP Trigger: GGGCGTCCTGGTATTCTCTCAGCAAGGGAATGCAAG...GCCAGCACCCAGGACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR TCA 90 bp | TCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTCCTGGGTGCTGGCCCAACACCATTCCCTTaGTGCCCTGGTGGACCTGTT | + |
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Preference number: 4 (lower is better) Translates to: SRGLRAGMASLCVVLGAGPTPFP*CPGGPV Trigger: AACAGGTCCACCAGGGCATCAAGGGAATGGTGTTGG...GCCAGCACCCAGGACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR CCA 90 bp | AGCGTGATCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTCCTGGGAAGGAGCGAATCCACTaGATCACCGCCCGGGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: SVIKGFESRDGLAVCGPGKERIH*ITARVS Trigger: AGAGACCCGGGCGGTGATCCAGTGGATTCGCTCCTT...CCCAGGACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGATCACGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR CCA 90 bp | TCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTCCTGGGTGCTGGCGTGATGTCCGGGCATTaGTTGTGCACCTTGTACAGC | + |
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Preference number: 4 (lower is better) Translates to: SRGLRAGMASLCVVLGAGVMSGH*LCTLYS Trigger: GCTGTACAAGGTGCACAACCAATGCCCGGACATCAC...GCCAGCACCCAGGACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR CCA 90 bp | AGCGTGATCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTCCTGGGCGTAGGAGTAGACCTTaGCCAGCGTCTGGAAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: SVIKGFESRDGLAVCGPGRRSRP*PASGRA Trigger: AGCTCTTCCAGACGCTGGCCAAGGTCTACTCCTACG...CCCAGGACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGATCACGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR CCA 90 bp | AGCGTGATCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTCCTGGGCCCTTGATGCCCTGGTaGACCTGTTCCAAGAACTGG | + |
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Preference number: 4 (lower is better) Translates to: SVIKGFESRDGLAVCGPGPLMPW*TCSKNW Trigger: CCAGTTCTTGGAACAGGTCCACCAGGGCATCAAGGG...CCCAGGACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGATCACGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR TCA 90 bp | TCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTCCTGGGTGCTGGCAGTAGAAGTAGGTGTTaGGATCCGGGAAGTTGCGGT | + |
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Preference number: 4 (lower is better) Translates to: SRGLRAGMASLCVVLGAGSRSRC*DPGSCG Trigger: ACCGCAACTTCCCGGATCTCAACACCTACTTCTACT...GCCAGCACCCAGGACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR TCA 90 bp | AGCGTGATCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTCCTGGGATCCCCATGTTCACCTaGAGTGACGTCGTGGTTGAT | + |
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Preference number: 4 (lower is better) Translates to: SVIKGFESRDGLAVCGPGIPMFT*SDVVVD Trigger: ATCAACCACGACGTCACTTCAGGTGAACATGGGGAT...CCCAGGACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGATCACGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR TCA 90 bp | AAGAGAAGCGTGATCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTCTGGTGCCTTGGCAGTaGCAGAGTAAGTACCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: KRSVIKGFESRDGLAVCGLVPWQ*QSKYPG Trigger: TCCCGGGTACTTACTCTGTCACTGCCAAGGCACCAG...ACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGATCACGCTTCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR GCA 90 bp | AAGAGAAGCGTGATCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTTCGGGGAATTGGAGGTaGGATGGGGACCTCGAAACC | + |
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Preference number: 4 (lower is better) Translates to: KRSVIKGFESRDGLAVCGSGNWR*DGDLET Trigger: GGTTTCGAGGTCCCCATCGCACCTCCAATTCCCCGA...ACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGATCACGCTTCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR GCA 90 bp | AAGAGAAGCGTGATCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTGGGGTCGTACCCTGGTaGCTTGGCAGTGACAGAGTA | + |
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Preference number: 4 (lower is better) Translates to: KRSVIKGFESRDGLAVCGGVVPW*LGSDRV Trigger: TACTCTGTCACTGCCAAGGCACCAGGGTACGACCCC...ACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGATCACGCTTCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR CCA 90 bp | AAGAGAAGCGTGATCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTATACCCAGACATGTTTaGGCCCTGGGCAGCAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: KRSVIKGFESRDGLAVCGIPRHV*ALGSSH Trigger: GTGGCTGCTGCCCAGGGCCCAAACATGTCTGGGTAT...ACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGATCACGCTTCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR CCA 90 bp | AGCGTGATCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTCCTGGGGTTGGTGATGCCGTCTaGAAAGTAGTCCCCACAGTT | + |
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Preference number: 4 (lower is better) Translates to: SVIKGFESRDGLAVCGPGVGDAV*KVVPTV Trigger: AACTGTGGGGACTACTTTCCAGACGGCATCACCAAC...CCCAGGACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGATCACGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR CCA 90 bp | AGCGTGATCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTCCTGGGATTCCCTTGATGCCCTaGTGGACCTGTTCCAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: SVIKGFESRDGLAVCGPGIPLMP*WTCSKN Trigger: GTTCTTGGAACAGGTCCACCAGGGCATCAAGGGAAT...CCCAGGACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGATCACGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR CCA 90 bp | TCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTCCTGGGTGCTGGCGAGCTTCGCTTGAGTTaGAAGTCAACCACTGTTGGT | + |
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Preference number: 4 (lower is better) Translates to: SRGLRAGMASLCVVLGAGELRLS*KSTTVG Trigger: ACCAACAGTGGTTGACTTCCAACTCAAGCGAAGCTC...GCCAGCACCCAGGACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR CCA 90 bp | TCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTCCTGGGTGCTGGCATGCCGTTTCGTTGCTaGGTCTTTCTTTCTGGATGT | + |
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Preference number: 4 (lower is better) Translates to: SRGLRAGMASLCVVLGAGMPFRC*VFLSGC Trigger: ACATCCAGAAAGAAAGACCCAGCAACGAAACGGCAT...GCCAGCACCCAGGACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR CCA 90 bp | AAGAGAAGCGTGATCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTTCACAGTCACTGTTTTaGGGTCGTACCCTGGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: KRSVIKGFESRDGLAVCGSQSLF*GRTLVP Trigger: AGGCACCAGGGTACGACCCCAAAACAGTGACTGTGA...ACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGATCACGCTTCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR GCA 90 bp | AGCGTGATCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTCCTGGGGGACCTCGAAACCTATaGTCAAGTGACTTGTCATAT | + |
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Preference number: 4 (lower is better) Translates to: SVIKGFESRDGLAVCGPGGPRNL*SSDLSY Trigger: ATATGACAAGTCACTTGAGCATAGGTTTCGAGGTCC...CCCAGGACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGATCACGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR GCA 90 bp | AAGAGAAGCGTGATCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTAGCACTTCGTTCCCGTaGATGTTTCCCACATACTTG | + |
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Preference number: 4 (lower is better) Translates to: KRSVIKGFESRDGLAVCGSTSFP*MFPTYL Trigger: CAAGTATGTGGGAAACATGCACGGGAACGAAGTGCT...ACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGATCACGCTTCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS GCA 90 bp | TCGTTGCTGGGTCTTTCTTTCTGGATGTCCGGGGCTGCTTTGCCCTaGCTCCCTGCCCTCGGCCGGGAGCTCTCTGCACAGGGTACACCT | + |
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Preference number: 5 (lower is better) Translates to: SLLGLSFWMSGAALP*LPALGRELSAQGTP Trigger: AGGTGTACCCTGTGCAGAGAGCTCCCGGCCGAGGGCAGGGAGGCAGGGCAAAGCAGCCCCGGACATCCAGAAAGAAAGACCCAGCAACGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR CAA 90 bp | TCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTCCTGGGTGCTGGCGGAAGTCAACCACTGTaGGTCCCGCAGGTCCCACCG | + |
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Preference number: 5 (lower is better) Translates to: SRGLRAGMASLCVVLGAGGSQPL*VPQVPP Trigger: CGGTGGGACCTGCGGGACCAACAGTGGTTGACTTCC...GCCAGCACCCAGGACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS GCA 90 bp | CTATGCCGTTTCGTTGCTGGGTCTTTCTTTCTGGATGTCCGGGGCTaGTTTGCCCTGCCTCCCTGCCCTCGGCCGGGAGCTCTCTGCACA | + |
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Preference number: 5 (lower is better) Translates to: LCRFVAGSFFLDVRG*FALPPCPRPGALCT Trigger: TGTGCAGAGAGCTCCCGGCCGAGGGCAGGGAGGCAGGGCAAAGCAGCCCCGGACATCCAGAAAGAAAGACCCAGCAACGAAACGGCATAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS CCA 90 bp | TCCCGCAGGTCCCACCGTCACAGTCACTGTTTTGGGGTCGTACCCTaGTGCCTTGGCAGTGACAGAGTAAGTACCCGGGAGCAGCAGCCG | + |
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Preference number: 5 (lower is better) Translates to: SRRSHRHSHCFGVVP*CLGSDRVSTREQQP Trigger: CGGCTGCTGCTCCCGGGTACTTACTCTGTCACTGCCAAGGCACCAGGGTACGACCCCAAAACAGTGACTGTGACGGTGGGACCTGCGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR CAA 90 bp | TCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTCCTGGGTGCTGGCGATACCCAGACATGTTaGGGCCCTGGGCAGCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: SRGLRAGMASLCVVLGAGDTQTC*GPGQQP Trigger: TGGCTGCTGCCCAGGGCCCAAACATGTCTGGGTATC...GCCAGCACCCAGGACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR CAA 90 bp | TCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTCCTGGGTGCTGGCCCTCTGCAGCTCCTCTaGCCGGGGAAACTTGTCGCA | + |
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Preference number: 5 (lower is better) Translates to: SRGLRAGMASLCVVLGAGPLQLL*PGKLVA Trigger: TGCGACAAGTTTCCCCGGCAAGAGGAGCTGCAGAGG...GCCAGCACCCAGGACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS TCA 90 bp | CTGCCTCCCTGCCCTCGGCCGGGAGCTCTCTGCACAGGGTACACCTaGGATGAGCTTCGCTTGAGTTGGAAGTCAACCACTGTTGGTCCC | + |
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Preference number: 5 (lower is better) Translates to: LPPCPRPGALCTGYT*DELRLSWKSTTVGP Trigger: GGGACCAACAGTGGTTGACTTCCAACTCAAGCGAAGCTCATCTCAGGTGTACCCTGTGCAGAGAGCTCCCGGCCGAGGGCAGGGAGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS GCA 90 bp | CGCAGGTCCCACCGTCACAGTCACTGTTTTGGGGTCGTACCCTGGTaGCTTGGCAGTGACAGAGTAAGTACCCGGGAGCAGCAGCCGGAA | + |
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Preference number: 5 (lower is better) Translates to: RRSHRHSHCFGVVPW*LGSDRVSTREQQPE Trigger: TTCCGGCTGCTGCTCCCGGGTACTTACTCTGTCACTGCCAAGGCACCAGGGTACGACCCCAAAACAGTGACTGTGACGGTGGGACCTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR CAA 90 bp | TCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTCCTGGGTGCTGGCTCTTGCCGGGGAAACTaGTCGCAACTCAGCTCGAGC | + |
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Preference number: 5 (lower is better) Translates to: SRGLRAGMASLCVVLGAGSCRGN*SQLSSS Trigger: GCTCGAGCTGAGTTGCGACAAGTTTCCCCGGCAAGA...GCCAGCACCCAGGACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS TCA 90 bp | AGAGGTACCTCCCCTTCACACTGCGCCCGATGTTGTAGAGCCGCGTaGTGTCCGGGCATTGGTTGTGCACCTTGTACAGCGTCCGCACGA | + |
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Preference number: 5 (lower is better) Translates to: RGTSPSHCARCCRAA*CPGIGCAPCTASAR Trigger: TCGTGCGGACGCTGTACAAGGTGCACAACCAATGCCCGGACATCACGCGGCTCTACAACATCGGGCGCAGTGTGAAGGGGAGGTACCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS GCA 90 bp | CGCTGGTTTCGGTTCCGGAACTCCTCGCAGAGGAATTCCGACAGCTaGAGAAGCAGCTCGCGGCCCAGCACTTCGTTCCCGTGCATGTTT | + |
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Preference number: 5 (lower is better) Translates to: RWFRFRNSSQRNSDS*RSSSRPSTSFPCMF Trigger: AAACATGCACGGGAACGAAGTGCTGGGCCGCGAGCTGCTTCTGCAGCTGTCGGAATTCCTCTGCGAGGAGTTCCGGAACCGAAACCAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR CAA 90 bp | TCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTCCTGGGTGCTGGCATGTCCGGGCATTGGTaGTGCACCTTGTACAGCGTC | + |
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Preference number: 5 (lower is better) Translates to: SRGLRAGMASLCVVLGAGMSGHW*CTLYSV Trigger: GACGCTGTACAAGGTGCACAACCAATGCCCGGACAT...GCCAGCACCCAGGACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR CAA 90 bp | TCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTCCTGGGTGCTGGCCGTGATGTCCGGGCATaGGTTGTGCACCTTGTACAG | + |
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Preference number: 5 (lower is better) Translates to: SRGLRAGMASLCVVLGAGRDVRA*VVHLVQ Trigger: CTGTACAAGGTGCACAACCAATGCCCGGACATCACG...GCCAGCACCCAGGACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR CAA 90 bp | AGCGTGATCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTCCTGGGTTGAGATCCGGGAAGTaGCGGTTCAGGTCCACCCCA | + |
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Preference number: 5 (lower is better) Translates to: SVIKGFESRDGLAVCGPGLRSGK*RFRSTP Trigger: TGGGGTGGACCTGAACCGCAACTTCCCGGATCTCAA...CCCAGGACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGATCACGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR CAA 90 bp | AGCGTGATCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTCCTGGGGTCACAGTCACTGTTTaGGGGTCGTACCCTGGTGCC | + |
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Preference number: 5 (lower is better) Translates to: SVIKGFESRDGLAVCGPGVTVTV*GSYPGA Trigger: GGCACCAGGGTACGACCCCAAAACAGTGACTGTGAC...CCCAGGACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGATCACGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS GCA 90 bp | TCCAAGAACTGGATTAAGGCTTCCCGGTTACCCAGCCACTCCCTCTaGAGCTCCTCTTGCCGGGGAAACTTGTCGCAACTCAGCTCGAGC | + |
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Preference number: 5 (lower is better) Translates to: SKNWIKASRLPSHSL*SSSCRGNLSQLSSS Trigger: GCTCGAGCTGAGTTGCGACAAGTTTCCCCGGCAAGAGGAGCTGCAGAGGGAGTGGCTGGGTAACCGGGAAGCCTTAATCCAGTTCTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS TCA 90 bp | GTCATATGGGTAATTGGCCACCACAGCCCCGCCGTGCATATTGGCTaGGAGAACGAAGTTCAAGGAGCGAATCCACTGGATCACCGCCCG | + |
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Preference number: 5 (lower is better) Translates to: VIWVIGHHSPAVHIG*ENEVQGANPLDHRP Trigger: CGGGCGGTGATCCAGTGGATTCGCTCCTTGAACTTCGTTCTCTCAGCCAATATGCACGGCGGGGCTGTGGTGGCCAATTACCCATATGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS CCA 90 bp | CCTTGGCCAGCGTCTGGAAGAGCTCGTCATCAGGTGTCGGGGAATTaGAGGTGCGATGGGGACCTCGAAACCTATGCTCAAGTGACTTGT | + |
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Preference number: 5 (lower is better) Translates to: PWPASGRARHQVSGN*RCDGDLETYAQVTC Trigger: ACAAGTCACTTGAGCATAGGTTTCGAGGTCCCCATCGCACCTCCAATTCCCCGACACCTGATGACGAGCTCTTCCAGACGCTGGCCAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS CCA 90 bp | AGTTCCAACCTTGGTGCATCCATCCATGGGCGTAGGAGTAGACCTTaGCCAGCGTCTGGAAGAGCTCGTCATCAGGTGTCGGGGAATTGG | + |
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Preference number: 5 (lower is better) Translates to: SSNLGASIHGRRSRP*PASGRARHQVSGNW Trigger: CCAATTCCCCGACACCTGATGACGAGCTCTTCCAGACGCTGGCCAAGGTCTACTCCTACGCCCATGGATGGATGCACCAAGGTTGGAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR CAA 90 bp | AAGAGAAGCGTGATCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTCATTGGTTGTGCACCTaGTACAGCGTCCGCACGAGG | + |
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Preference number: 5 (lower is better) Translates to: KRSVIKGFESRDGLAVCGHWLCT*YSVRTR Trigger: CCTCGTGCGGACGCTGTACAAGGTGCACAACCAATG...ACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGATCACGCTTCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR CAA 90 bp | AAGAGAAGCGTGATCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTTCCAACACCATTCCCTaGATGCCCTGGTGGACCTGT | + |
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Preference number: 5 (lower is better) Translates to: KRSVIKGFESRDGLAVCGSNTIP*MPWWTC Trigger: ACAGGTCCACCAGGGCATCAAGGGAATGGTGTTGGA...ACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGATCACGCTTCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS GCA 90 bp | GTAGGTGTTGAGATCCGGGAAGTTGCGGTTCAGGTCCACCCCATTTaGATTGTTCCTACCAACCAGATACCCAGACATGTTTGGGCCCTG | + |
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Preference number: 5 (lower is better) Translates to: VGVEIREVAVQVHPI*IVPTNQIPRHVWAL Trigger: CAGGGCCCAAACATGTCTGGGTATCTGGTTGGTAGGAACAATGCAAATGGGGTGGACCTGAACCGCAACTTCCCGGATCTCAACACCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS CCA 90 bp | ACTTGTCATATGGGTAATTGGCCACCACAGCCCCGCCGTGCATATTaGCTGAGAGAACGAAGTTCAAGGAGCGAATCCACTGGATCACCG | + |
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Preference number: 5 (lower is better) Translates to: TCHMGNWPPQPRRAY*LRERSSRSESTGSP Trigger: CGGTGATCCAGTGGATTCGCTCCTTGAACTTCGTTCTCTCAGCCAATATGCACGGCGGGGCTGTGGTGGCCAATTACCCATATGACAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS CCA 90 bp | GGGGACCTCGAAACCTATGCTCAAGTGACTTGTCATATGGGTAATTaGCCACCACAGCCCCGCCGTGCATATTGGCTGAGAGAACGAAGT | + |
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Preference number: 5 (lower is better) Translates to: GDLETYAQVTCHMGN*PPQPRRAYWLRERS Trigger: ACTTCGTTCTCTCAGCCAATATGCACGGCGGGGCTGTGGTGGCCAATTACCCATATGACAAGTCACTTGAGCATAGGTTTCGAGGTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR CAA 90 bp | AAGAGAAGCGTGATCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTTCAGGTCCACCCCATTaGCATTGTTCCTACCAACCA | + |
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Preference number: 5 (lower is better) Translates to: KRSVIKGFESRDGLAVCGSGPPH*HCSYQP Trigger: TGGTTGGTAGGAACAATGCAAATGGGGTGGACCTGA...ACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGATCACGCTTCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR CAA 90 bp | AAGAGAAGCGTGATCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTTCCACCCCATTTGCATaGTTCCTACCAACCAGATAC | + |
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Preference number: 5 (lower is better) Translates to: KRSVIKGFESRDGLAVCGSTPFA*FLPTRY Trigger: GTATCTGGTTGGTAGGAACAATGCAAATGGGGTGGA...ACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGATCACGCTTCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR CAA 90 bp | AAGAGAAGCGTGATCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTAAGTCTTGCATTCCCTaGCTGAGAGAATACCAGGAC | + |
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Preference number: 5 (lower is better) Translates to: KRSVIKGFESRDGLAVCGKSCIP*LREYQD Trigger: GTCCTGGTATTCTCTCAGCAAGGGAATGCAAGACTT...ACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGATCACGCTTCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS-3UTR CAA 90 bp | AAGAGAAGCGTGATCAAGGGGTTTGAGAGCAGGGATGGCCTCGCTGTGTGTGGTGAGATAATTGAAGTCTaGCATTCCCTTGCTGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: KRSVIKGFESRDGLAVCGEIIEV*HSLAER Trigger: TCTCTCAGCAAGGGAATGCAAGACTTCAATTATCTC...ACCACACACAGCGAGGCCATCCCTGCTCTCAAACCCCTTGATCACGCTTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS GCA 72 bp | GGTCTTTCTTTCTGGATGTCCGGGGCTGCTTTGCCCTaGCTCCCTGCCCTCGGCCGGGAGCTCTCTGCACAG | + |
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Preference number: 6 (lower is better) Translates to: GLSFWMSGAALP*LPALGRELSAQ Trigger: CTGTGCAGAGAGCTCCCGGCCGAGGGCAGGGAGGCAGGGCAAAGCAGCCCCGGACATCCAGAAAGAAAGACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS GCA 72 bp | TGCTGGGTCTTTCTTTCTGGATGTCCGGGGCTGCTTTaGCCTGCCTCCCTGCCCTCGGCCGGGAGCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: CWVFLSGCPGLL*PASLPSAGSSL Trigger: CAGAGAGCTCCCGGCCGAGGGCAGGGAGGCAGGGCAAAGCAGCCCCGGACATCCAGAAAGAAAGACCCAGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS CAA 72 bp | GCGCCCGATGTTGTAGAGCCGCGTGATGTCCGGGCATaGGTTGTGCACCTTGTACAGCGTCCGCACGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: APDVVEPRDVRA*VVHLVQRPHEV Trigger: GACCTCGTGCGGACGCTGTACAAGGTGCACAACCAATGCCCGGACATCACGCGGCTCTACAACATCGGGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS CAA 90 bp | CTTCACACTGCGCCCGATGTTGTAGAGCCGCGTGATGTCCGGGCATaGGTTGTGCACCTTGTACAGCGTCCGCACGAGGTCGTCGTAGCG | + |
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Preference number: 6 (lower is better) Translates to: LHTAPDVVEPRDVRA*VVHLVQRPHEVVVA Trigger: CGCTACGACGACCTCGTGCGGACGCTGTACAAGGTGCACAACCAATGCCCGGACATCACGCGGCTCTACAACATCGGGCGCAGTGTGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS CCA 72 bp | GACCCCTATGCCGTTTCGTTGCTGGGTCTTTCTTTCTaGATGTCCGGGGCTGCTTTGCCCTGCCTCCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: DPYAVSLLGLSF*MSGAALPCLPA Trigger: GGCAGGGAGGCAGGGCAAAGCAGCCCCGGACATCCAGAAAGAAAGACCCAGCAACGAAACGGCATAGGGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS TCA 72 bp | TCCCCTTCACACTGCGCCCGATGTTGTAGAGCCGCGTaGTGTCCGGGCATTGGTTGTGCACCTTGTACAGCG | + |
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Preference number: 6 (lower is better) Translates to: SPSHCARCCRAA*CPGIGCAPCTA Trigger: CGCTGTACAAGGTGCACAACCAATGCCCGGACATCACGCGGCTCTACAACATCGGGCGCAGTGTGAAGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS TCA 72 bp | TGCCCTCGGCCGGGAGCTCTCTGCACAGGGTACACCTaGGATGAGCTTCGCTTGAGTTGGAAGTCAACCACT | + |
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Preference number: 6 (lower is better) Translates to: CPRPGALCTGYT*DELRLSWKSTT Trigger: AGTGGTTGACTTCCAACTCAAGCGAAGCTCATCTCAGGTGTACCCTGTGCAGAGAGCTCCCGGCCGAGGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS GCA 72 bp | TGGATTAAGGCTTCCCGGTTACCCAGCCACTCCCTCTaGAGCTCCTCTTGCCGGGGAAACTTGTCGCAACTC | + |
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Preference number: 6 (lower is better) Translates to: WIKASRLPSHSL*SSSCRGNLSQL Trigger: GAGTTGCGACAAGTTTCCCCGGCAAGAGGAGCTGCAGAGGGAGTGGCTGGGTAACCGGGAAGCCTTAATCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS CCA 72 bp | CTTGGTGCATCCATCCATGGGCGTAGGAGTAGACCTTaGCCAGCGTCTGGAAGAGCTCGTCATCAGGTGTCG | + |
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Preference number: 6 (lower is better) Translates to: LGASIHGRRSRP*PASGRARHQVS Trigger: CGACACCTGATGACGAGCTCTTCCAGACGCTGGCCAAGGTCTACTCCTACGCCCATGGATGGATGCACCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS CAA 90 bp | ACCTTGGCCAGCGTCTGGAAGAGCTCGTCATCAGGTGTCGGGGAATaGGAGGTGCGATGGGGACCTCGAAACCTATGCTCAAGTGACTTG | + |
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Preference number: 6 (lower is better) Translates to: TLASVWKSSSSGVGE*EVRWGPRNLCSSDL Trigger: CAAGTCACTTGAGCATAGGTTTCGAGGTCCCCATCGCACCTCCAATTCCCCGACACCTGATGACGAGCTCTTCCAGACGCTGGCCAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS TCA 72 bp | TCACTGTTTTGGGGTCGTACCCTGGTGCCTTGGCAGTaGCAGAGTAAGTACCCGGGAGCAGCAGCCGGAAAT | + |
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Preference number: 6 (lower is better) Translates to: SLFWGRTLVPWQ*QSKYPGAAAGN Trigger: ATTTCCGGCTGCTGCTCCCGGGTACTTACTCTGTCACTGCCAAGGCACCAGGGTACGACCCCAAAACAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS CCA 72 bp | GCGTCTGGAAGAGCTCGTCATCAGGTGTCGGGGAATTaGAGGTGCGATGGGGACCTCGAAACCTATGCTCAA | + |
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Preference number: 6 (lower is better) Translates to: ASGRARHQVSGN*RCDGDLETYAQ Trigger: TTGAGCATAGGTTTCGAGGTCCCCATCGCACCTCCAATTCCCCGACACCTGATGACGAGCTCTTCCAGACGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS CAA 72 bp | AGCGTCTGGAAGAGCTCGTCATCAGGTGTCGGGGAATaGGAGGTGCGATGGGGACCTCGAAACCTATGCTCA | + |
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Preference number: 6 (lower is better) Translates to: SVWKSSSSGVGE*EVRWGPRNLCS Trigger: TGAGCATAGGTTTCGAGGTCCCCATCGCACCTCCAATTCCCCGACACCTGATGACGAGCTCTTCCAGACGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS CAA 90 bp | ACGTCGTGGTTGATGCCGGTGACGGAAATGACAGCCCCCGTGAGGTaGTTAGAGTTCTCATCCAACACCATTCCCTTGATGCCCTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: TSWLMPVTEMTAPVR*LEFSSNTIPLMPWW Trigger: CCACCAGGGCATCAAGGGAATGGTGTTGGATGAGAACTCTAACAACCTCACGGGGGCTGTCATTTCCGTCACCGGCATCAACCACGACGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS TCA 72 bp | CGGGAGCAGCAGCCGGAAATAATCCCCATGTTCACCTaGAGTGACGTCGTGGTTGATGCCGGTGACGGAAAT | + |
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Preference number: 6 (lower is better) Translates to: REQQPEIIPMFT*SDVVVDAGDGN Trigger: ATTTCCGTCACCGGCATCAACCACGACGTCACTTCAGGTGAACATGGGGATTATTTCCGGCTGCTGCTCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS TCA 72 bp | CTCTCTGCACAGGGTACACCTGAGATGAGCTTCGCTTaGGTTGGAAGTCAACCACTGTTGGTCCCGCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: LSAQGTPEMSFA*VGSQPLLVPQV Trigger: GACCTGCGGGACCAACAGTGGTTGACTTCCAACTCAAGCGAAGCTCATCTCAGGTGTACCCTGTGCAGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS GCA 72 bp | GGAAGAGCTCGTCATCAGGTGTCGGGGAATTGGAGGTaGGATGGGGACCTCGAAACCTATGCTCAAGTGACT | + |
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Preference number: 6 (lower is better) Translates to: GRARHQVSGNWR*DGDLETYAQVT Trigger: AGTCACTTGAGCATAGGTTTCGAGGTCCCCATCGCACCTCCAATTCCCCGACACCTGATGACGAGCTCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS CAA 72 bp | CCCAGCACTTCGTTCCCGTGCATGTTTCCCACATACTaGACTTCCGGTTCCAAGGGTTCATGGATCCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: PSTSFPCMFPTY*TSGSKGSWIPG Trigger: CCCTGGGATCCATGAACCCTTGGAACCGGAAGTCAAGTATGTGGGAAACATGCACGGGAACGAAGTGCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS CAA 90 bp | GTGTTGAGATCCGGGAAGTTGCGGTTCAGGTCCACCCCATTTGCATaGTTCCTACCAACCAGATACCCAGACATGTTTGGGCCCTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: VLRSGKLRFRSTPFA*FLPTRYPDMFGPWA Trigger: TGCCCAGGGCCCAAACATGTCTGGGTATCTGGTTGGTAGGAACAATGCAAATGGGGTGGACCTGAACCGCAACTTCCCGGATCTCAACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS TCA 72 bp | CCAGCACTTCGTTCCCGTGCATGTTTCCCACATACTTaGCTTCCGGTTCCAAGGGTTCATGGATCCCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: PALRSRACFPHT*LPVPRVHGSQG Trigger: ACCCTGGGATCCATGAACCCTTGGAACCGGAAGTCAAGTATGTGGGAAACATGCACGGGAACGAAGTGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS TCA 72 bp | GGCCACCGTTCTTGGAGTTGTAGTAGAAGTAGGTGTTaGGATCCGGGAAGTTGCGGTTCAGGTCCACCCCAT | + |
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Preference number: 6 (lower is better) Translates to: GHRSWSCSRSRC*DPGSCGSGPPH Trigger: ATGGGGTGGACCTGAACCGCAACTTCCCGGATCTCAACACCTACTTCTACTACAACTCCAAGAACGGTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS TCA 72 bp | GTAATTGGCCACCACAGCCCCGCCGTGCATATTGGCTaGGAGAACGAAGTTCAAGGAGCGAATCCACTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: VIGHHSPAVHIG*ENEVQGANPLD Trigger: ATCCAGTGGATTCGCTCCTTGAACTTCGTTCTCTCAGCCAATATGCACGGCGGGGCTGTGGTGGCCAATTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS CCA 72 bp | AGCTCGTCATCAGGTGTCGGGGAATTGGAGGTGCGATaGGGACCTCGAAACCTATGCTCAAGTGACTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSSGVGELEVR*GPRNLCSSDLS Trigger: TGACAAGTCACTTGAGCATAGGTTTCGAGGTCCCCATCGCACCTCCAATTCCCCGACACCTGATGACGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS GCA 72 bp | GAGATCCGGGAAGTTGCGGTTCAGGTCCACCCCATTTaGATTGTTCCTACCAACCAGATACCCAGACATGTT | + |
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Preference number: 6 (lower is better) Translates to: EIREVAVQVHPI*IVPTNQIPRHV Trigger: AACATGTCTGGGTATCTGGTTGGTAGGAACAATGCAAATGGGGTGGACCTGAACCGCAACTTCCCGGATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS CCA 72 bp | GAAACCTATGCTCAAGTGACTTGTCATATGGGTAATTaGCCACCACAGCCCCGCCGTGCATATTGGCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: ETYAQVTCHMGN*PPQPRRAYWLR Trigger: TCTCAGCCAATATGCACGGCGGGGCTGTGGTGGCCAATTACCCATATGACAAGTCACTTGAGCATAGGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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| CDS CAA 72 bp | TTGATGCCGGTGACGGAAATGACAGCCCCCGTGAGGTaGTTAGAGTTCTCATCCAACACCATTCCCTTGATG | + |
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Preference number: 6 (lower is better) Translates to: LMPVTEMTAPVR*LEFSSNTIPLM Trigger: CATCAAGGGAATGGTGTTGGATGAGAACTCTAACAACCTCACGGGGGCTGTCATTTCCGTCACCGGCATCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026210.5 |
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